# terms

id: PBO:0056461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBL associated serine protease 1","termid":"PBO:0056461"}


id: PBO:0002823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Hsf1","termid":"PBO:0002823"}


id: FYPO:0005180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to UV.","definition_xrefs":["PMID:15498101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"normal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"normal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"normal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"normal mitotic cell cycle regulation in response to UV during mitotic G1phase","type":"exact"}],"termid":"FYPO:0005180"}


id: PBO:0052019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 8","termid":"PBO:0052019"}


id: MONDO:0968980
data:
  {"annotated_genes":["SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88939,88940],"is_not":false,"summary":null,"term":"MONDO:0968980"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620792","MEDGEN:1856162","UMLS:C5935610"],"termid":"MONDO:0968980","terms_by_termid":{"MONDO:0968980":null},"xrefs":{"Monarch":{"xref_id":"0968980"}}}


id: PBO:0083331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER137C","termid":"PBO:0083331"}


id: PBO:0065091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-activated catalytic subunit gamma","termid":"PBO:0065091"}


id: PBO:0027543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_mitochondria","termid":"PBO:0027543"}


id: MONDO:1011353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radiculitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiculitis, non-human animal","termid":"MONDO:1011353","xrefs":{"Monarch":{"xref_id":"1011353"}}}


id: PBO:0017568
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Walker-Warburg syndrome","termid":"PBO:0017568"}


id: MONDO:0009171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial dystrophy, congenital hereditary, with nail hypoplasia","secondary_identifiers":["MESH:C565591","OMIM:226110","UMLS:C1856970","MEDGEN:341664"],"synonyms":[{"name":"endothelial dystrophy, congenital hereditary, with nail hypoplasia","type":"exact"}],"termid":"MONDO:0009171","xrefs":{"Monarch":{"xref_id":"0009171"}}}


id: FYPO:0005965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lithium import","termid":"FYPO:0005964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased lithium import","synonyms":[{"name":"decreased cellular lithium import","type":"exact"},{"name":"decreased lithium import during mitotic cell cycle","type":"related"},{"name":"decreased lithium import during vegetative growth","type":"exact"},{"name":"decreased lithium import into cell","type":"exact"},{"name":"decreased lithium ion import","type":"exact"},{"name":"reduced lithium import","type":"exact"}],"termid":"FYPO:0005965"}


id: GO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an eosinophil within or between different tissues and organs of the body.","definition_xrefs":["GOC:BHF","GOC:mah","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil migration","termid":"GO:0072677"}


id: MONDO:0030483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive immune disorder characterized specifically by the development of disseminated mycobacterial disease following vaccination with BCG. The single patient described did not develop other clinical infectious diseases, although serology documented exposure to various viruses and bacteria. Immunologic workup shows defective development of certain innate immunologic cells and decreased production of gamma-interferon (IFNG). Additional manifestations include persistent reactive airway disease associated with increased production of Th2 cytokines.","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 88","secondary_identifiers":["UMLS:C5562026","MEDGEN:1794236","OMIM:619630"],"synonyms":[{"name":"IMD88","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to TBX21 deficiency","type":"exact"}],"termid":"MONDO:0030483","xrefs":{"Monarch":{"xref_id":"0030483"}}}


id: GO:0071555
data:
  {"annotated_genes":["SJAG_02718","SJAG_03646","SJAG_01290","SJAG_02590","SJAG_02845","SJAG_01835","SJAG_03444","SJAG_05001","SJAG_04868","SJAG_00218","SJAG_03295","SJAG_01017","SJAG_01321","SJAG_03631","SJAG_04073","SJAG_01888","SJAG_04462","SJAG_00163","SJAG_04620","SJAG_03013","SJAG_00974","SJAG_01227","SJAG_02733","SJAG_01453","SJAG_04595","SJAG_00667","SJAG_02446","SJAG_02192","SJAG_02649","SJAG_01171","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92018,90472,93546,89978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[101939,113148,90045,103740,90866,109884,103741,95795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[76199,76962,81944,73010,91107,76862,77545,78489,111874,78121,79586,72739,72775,79602,104251,81257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031505"},{"annotations":[73227,112810,89362],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"},{"relation_name":"is_a","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00218":null,"SJAG_00667":null,"SJAG_00974":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01227":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_02733":null,"SJAG_02845":null,"SJAG_03013":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04595":null,"SJAG_04620":null,"SJAG_04868":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0007047","GO:0044234"],"synonyms":[{"name":"cell wall organisation","type":"exact"},{"name":"cell wall organisation in other organism","type":"exact"},{"name":"cell wall organization and biogenesis","type":"related"},{"name":"cell wall organization at cellular level","type":"exact"},{"name":"cell wall organization in other organism","type":"exact"},{"name":"cellular cell wall organisation","type":"exact"},{"name":"cellular cell wall organization","type":"exact"}],"termid":"GO:0071555","terms_by_termid":{"GO:0030476":null,"GO:0031505":null,"GO:0060237":null,"GO:1904541":null}}


id: MONDO:0029137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 74","secondary_identifiers":["GARD:18151","DOID:0112165","OMIM:618140","UMLS:C4748334","MEDGEN:1648467"],"synonyms":[{"name":"DFNA74","type":"narrow"},{"name":"deafness, autosomal dominant 74","type":"narrow"}],"termid":"MONDO:0029137","xrefs":{"Monarch":{"xref_id":"0029137"}}}


id: GO:0070393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues.","definition_xrefs":["PMID:14665680","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"teichoic acid catabolic process","synonyms":[{"name":"teichoic acid breakdown","type":"exact"},{"name":"teichoic acid catabolism","type":"exact"},{"name":"teichoic acid degradation","type":"exact"}],"termid":"GO:0070393"}


id: PBO:0027030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nuclear_envelope","termid":"PBO:0027030"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: GO:1903401
data:
  {"annotated_genes":["SJAG_00543","SJAG_03256","SJAG_03400","SJAG_04637","SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[99135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160256"},{"annotations":[111851,104600,105629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine across a membrane.","definition_xrefs":["PMID:8195186","GO_REF:0000069","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transport","termid":"GO:1902022"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-lysine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903401","terms_by_termid":{"GO:0089707":null,"GO:0090517":null,"GO:0097639":null,"GO:0160256":null}}


id: PBO:0049674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase 1","termid":"PBO:0049674"}


id: GO:0006248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CMP, cytidine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CMP metabolic process","termid":"GO:0046035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"CMP catabolic process","synonyms":[{"name":"CMP breakdown","type":"exact"},{"name":"CMP catabolism","type":"exact"},{"name":"CMP degradation","type":"exact"}],"termid":"GO:0006248"}


id: GO:0090284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:tb","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein glycosylation in Golgi (obsolete GO:0090284)","synonyms":[{"name":"positive regulation of protein amino acid glycosylation in Golgi","type":"exact"}],"termid":"GO:0090284"}


id: PBO:0018189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic26 (predicted)","termid":"PBO:0018189"}


id: PBO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB binding protein","termid":"PBO:0043878"}


id: GO:1904540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycolytic process through fructose-6-phosphate.","definition_xrefs":["GO_REF:0000058","GOC:dph","GOC:TermGenie","ISBN:0201090910","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycolytic process","termid":"GO:0045821"},{"relation_name":"is_a","term_name":"regulation of glycolytic process through fructose-6-phosphate","termid":"GO:1904538"},{"relation_name":"positively_regulates","term_name":"glycolytic process through fructose-6-phosphate","termid":"GO:0061615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycolytic process through fructose-6-phosphate","synonyms":[{"name":"activation of glycolysis through fructose-6-phosphate","type":"narrow"},{"name":"activation of glycolytic process through fructose-6-phosphate","type":"narrow"},{"name":"positive regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"up-regulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"up-regulation of glycolytic process through fructose-6-phosphate","type":"exact"},{"name":"upregulation of glycolysis through fructose-6-phosphate","type":"exact"},{"name":"upregulation of glycolytic process through fructose-6-phosphate","type":"exact"}],"termid":"GO:1904540"}


id: GO:1903862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative phosphorylation.","definition_xrefs":["GOC:TermGenie","PMID:10225962","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation","termid":"GO:0002082"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of oxidative phosphorylation","synonyms":[{"name":"activation of oxidative phosphorylation","type":"narrow"},{"name":"activation of respiratory-chain phosphorylation","type":"narrow"},{"name":"positive regulation of respiratory-chain phosphorylation","type":"exact"},{"name":"up regulation of oxidative phosphorylation","type":"exact"},{"name":"up regulation of respiratory-chain phosphorylation","type":"exact"},{"name":"up-regulation of oxidative phosphorylation","type":"exact"},{"name":"up-regulation of respiratory-chain phosphorylation","type":"exact"},{"name":"upregulation of oxidative phosphorylation","type":"exact"},{"name":"upregulation of respiratory-chain phosphorylation","type":"exact"}],"termid":"GO:1903862"}


id: PBO:0116597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTRA1 and ARMS2 antisense RNA 1","termid":"PBO:0116597"}


id: MONDO:0007282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 2pter-p24.","definition_xrefs":["DOID:0110232","PMID:15933805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 29","secondary_identifiers":["UMLS:C3805409","OMIM:115800","GARD:18233","MEDGEN:811739"],"synonyms":[{"name":"CTRCT29","type":"related"},{"name":"cataract 29","type":"exact"},{"name":"cataract 29 coralliform","type":"exact"},{"name":"cataract 29, coralliform","type":"related"},{"name":"cataract type 29","type":"exact"}],"termid":"MONDO:0007282","xrefs":{"Monarch":{"xref_id":"0007282"}}}


id: MONDO:0012823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 7","secondary_identifiers":["OMIM:612232","UMLS:C2677120","MEDGEN:394209"],"synonyms":[{"name":"CRCS7","type":"exact"},{"name":"colorectal cancer, susceptibility to, 7","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 11","type":"related"}],"termid":"MONDO:0012823","xrefs":{"Monarch":{"xref_id":"0012823"}}}


id: PBO:0078659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 12-1","termid":"PBO:0078659"}


id: MONDO:0019118
data:
  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dystrophy","type":"exact"}],"termid":"MONDO:0019118","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008379":null,"MONDO:0009624":null,"MONDO:0009796":null,"MONDO:0010557":null,"MONDO:0010723":null,"MONDO:0010806":null,"MONDO:0010819":null,"MONDO:0010828":null,"MONDO:0011075":null,"MONDO:0012056":null,"MONDO:0012099":null,"MONDO:0012363":null,"MONDO:0012419":null,"MONDO:0012477":null,"MONDO:0012990":null,"MONDO:0013454":null,"MONDO:0013468":null,"MONDO:0013516":null,"MONDO:0013611":null,"MONDO:0013802":null,"MONDO:0014256":null,"MONDO:0014323":null,"MONDO:0014372":null,"MONDO:0014400":null,"MONDO:0014669":null,"MONDO:0015013":null,"MONDO:0031007":null,"MONDO:0032604":null,"MONDO:0032794":null,"MONDO:0044320":null,"MONDO:0060650":null},"xrefs":{"Monarch":{"xref_id":"0019118"}}}


id: MONDO:0021218
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id: GO:0110023
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle myoblast proliferation.","definition_xrefs":["GOC:rph","PMID:26512644","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle myoblast proliferation","termid":"GO:0110022"},{"relation_name":"is_a","term_name":"negative regulation of myoblast proliferation","termid":"GO:2000818"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle myoblast proliferation","termid":"GO:0110021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle myoblast proliferation","termid":"GO:0110023"}


id: GO:0000055
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  {"annotated_genes":["SJAG_01391","SJAG_03719","SJAG_00753","SJAG_01065","SJAG_00178","SJAG_01358","SJAG_03882","SJAG_04308"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77806,78329,78826,81893,101423,107553,118067,119524],"is_not":false,"summary":null,"term":"GO:0000055"}]},"cv_name":"biological_process","definition":"The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00753":null,"SJAG_01065":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_03719":null,"SJAG_03882":null,"SJAG_04308":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006810","GO:0042254","GO:0051179","GO:0006913"],"is_obsolete":false,"name":"ribosomal large subunit export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000057"],"synonyms":[{"name":"50S ribosomal subunit export from nucleus","type":"narrow"},{"name":"60S ribosomal subunit export from nucleus","type":"narrow"},{"name":"ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"ribosomal large subunit export out of nucleus","type":"exact"},{"name":"ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:0000055","terms_by_termid":{"GO:0000055":null}}


id: PBO:0011504
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011504"}


id: MONDO:0014292
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy with mild cerebellar ataxia and white matter edema","secondary_identifiers":["NCIT:C171603","Orphanet:363540","GARD:17565","OMIM:615651","SCTID:768663003","UMLS:C4554120","MEDGEN:1638681"],"synonyms":[{"name":"LKPAT","type":"related"},{"name":"leukoencephalopathy with ataxia","type":"related"}],"termid":"MONDO:0014292","xrefs":{"Monarch":{"xref_id":"0014292"}}}


id: PBO:0062537
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 2 pseudogene","termid":"PBO:0062537"}


id: PBO:0071196
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 37","termid":"PBO:0071196"}


id: PBO:0047549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 8","termid":"PBO:0047549"}


id: FYPO:0000529
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which peroxisome degradation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal peroxisome degradation","synonyms":[{"name":"normal pexophagy","type":"exact"},{"name":"pexophagy: normal","type":"related"}],"termid":"FYPO:0000529"}


id: PBO:0086064
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that influences nuclear pore distribution; co-purifies with ribosomes; contains a GYF domain, which bind proline-rich sequences; deletion extends chronological lifespan; SYH1 has a paralog, SMY2, that arose from the whole genome duplication","termid":"PBO:0086064"}


id: PBO:0062552
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily Q member 2","termid":"PBO:0062552"}


id: GO:0032311
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable heterodimer of angiogenin and placental ribonuclease inhibitor; interaction between angiogenin and PRI prevents angiogenin binding to its receptor to stimulate angiogenesis.","definition_xrefs":["PMID:3470787","PMID:2706246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"angiogenin-PRI complex","synonyms":[{"name":"angiogenin-placental ribonuclease inhibitor complex","type":"exact"}],"termid":"GO:0032311"}


id: PBO:0042666
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 22, pseudogene","termid":"PBO:0042666"}


id: GO:0016495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-X3-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X3-C chemokine has three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-X3-C chemokine receptor activity","termid":"GO:0016495"}


id: GO:0030338
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.18.2-RXN","RHEA:16145"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: GO:0019245
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D(-)-lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process from pyruvate","termid":"GO:0019244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D(-)-lactate biosynthetic process from pyruvate","synonyms":[{"name":"D(-)-lactate anabolism from pyruvate","type":"exact"},{"name":"D(-)-lactate formation from pyruvate","type":"exact"},{"name":"D(-)-lactate synthesis from pyruvate","type":"exact"}],"termid":"GO:0019245"}


id: GO:0003684
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id: PBO:0028107
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactose_absent_from_cell_wall_glycoprotein_glycan","termid":"PBO:0028107"}


id: GO:1903921
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing in phagocytic vesicle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23325791","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"protein processing in phagocytic vesicle","termid":"GO:1900756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"regulation of protein processing in phagocytic vesicle","synonyms":[{"name":"regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"regulation of protein processing in phagosome","type":"exact"}],"termid":"GO:1903921"}


id: PBO:0066321
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 1","termid":"PBO:0066321"}


id: GO:2000546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904849"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000544"},{"relation_name":"is_a","term_name":"positive regulation of endothelial cell chemotaxis","termid":"GO:2001028"},{"relation_name":"positively_regulates","term_name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000546"}


id: PBO:0111931
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3/PP2B/calcineurin subfamily","termid":"PBO:0111931"}


id: PBO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 3","termid":"PBO:0043310"}


id: GO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Feeding behavior in a larval (immature) organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval feeding behavior","synonyms":[{"name":"larval feeding behaviour","type":"exact"}],"termid":"GO:0030536"}


id: SO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The maternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally_imprinted","synonyms":[{"name":"maternally imprinted","type":"exact"}],"termid":"SO:0000135"}


id: PBO:0088694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32","termid":"PBO:0088694"}


id: PBO:0088138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity; serine protease of the subtilisin family; involved in protein degradation in the vacuole and required for full protein degradation during sporulation; activity inhibited by Pbi2p; protein abundance increases in response to DNA replication stress; PRB1 has a paralog, YSP3, that arose from the whole genome duplication","termid":"PBO:0088138"}


id: GO:0042060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:bf","PMID:15269788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing","secondary_identifiers":["Wikipedia:Wound_healing"],"termid":"GO:0042060"}


id: GO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the heart with respect to the left and right halves of the organism.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of heart left/right asymmetry","synonyms":[{"name":"determination of cardiac left/right asymmetry","type":"exact"}],"termid":"GO:0061371"}


id: GO:0034078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.","definition_xrefs":["GOC:mah","ISBN:0911910123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"},{"relation_name":"is_a","term_name":"glycol catabolic process","termid":"GO:0042846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"butanediol catabolic process","synonyms":[{"name":"butanediol breakdown","type":"exact"},{"name":"butanediol catabolism","type":"exact"},{"name":"butanediol degradation","type":"exact"},{"name":"butanediol utilization","type":"related"},{"name":"butylene glycol catabolic process","type":"exact"},{"name":"butylene glycol catabolism","type":"exact"}],"termid":"GO:0034078"}


id: PBO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2463","termid":"PBO:0055048"}


id: GO:0007096
data:
  {"annotated_genes":["SJAG_04597","SJAG_04464","SJAG_04943","SJAG_03126","SJAG_01050","SJAG_00082","SJAG_02736","SJAG_03048","SJAG_01801"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71993,72854,78261,112846],"is_not":false,"summary":null,"term":"GO:0007096"},{"annotations":[80623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031578"},{"annotations":[104163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[95526,91770,104170,113794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"}]},"cv_name":"biological_process","definition":"Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity.","definition_xrefs":["GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"regulates","term_name":"exit from mitosis","termid":"GO:0010458"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01050":null,"SJAG_01801":null,"SJAG_02736":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of exit from mitosis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176409"],"termid":"GO:0007096","terms_by_termid":{"GO:0001100":null,"GO:0007096":null,"GO:0031536":null,"GO:0031578":null}}


id: MONDO:1040001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any developmental defect during embryogenesis in which the cause of the disease is a mutation in the TP63 gene. This disease is characterized by variable ectodermal dysplasia, limb defects, and orofacial clefting.","definition_xrefs":["PMID:16740912","PMID:10839977","PMID:12766194","PMID:21204238","PMID:11528512","PMID:11159940","PMID:10535733","PMID:11462173","PMID:22574117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001","xrefs":{"Monarch":{"xref_id":"1040001"}}}


id: MONDO:1012349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recessive hypotrichosis, non-human animal","termid":"MONDO:1011747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recessive hypotrichosis, pig","secondary_identifiers":["OMIA:001279-9823"],"termid":"MONDO:1012349","xrefs":{"Monarch":{"xref_id":"1012349"}}}


id: MONDO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Alkhumra hemorrhagic fever virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kyasanur forest disease","termid":"MONDO:0017881"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alkhurma hemorrhagic fever","secondary_identifiers":["DOID:0050308","UMLS:C5230236","MEDGEN:1684673"],"synonyms":[{"name":"Alkhumra hemorrhagic fever virus caused disease or disorder","type":"exact"},{"name":"Alkhumra hemorrhagic fever virus disease or disorder","type":"exact"},{"name":"Alkhumra hemorrhagic fever virus infectious disease","type":"exact"}],"termid":"MONDO:0000310","xrefs":{"Monarch":{"xref_id":"0000310"}}}


id: GO:0008791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + L-arginine = CoA + N2-succinyl-L-arginine.","definition_xrefs":["EC:2.3.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"arginine N-succinyltransferase activity","secondary_identifiers":["MetaCyc:ARGININE-N-SUCCINYLTRANSFERASE-RXN","RHEA:15185"],"synonyms":[{"name":"AOST activity","type":"related"},{"name":"AST activity","type":"related"},{"name":"AstA","type":"related"},{"name":"arginine and ornithine N(2)-succinyltransferase activity","type":"related"},{"name":"arginine and ornithine N2-succinyltransferase activity","type":"related"},{"name":"arginine succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-arginine 2-N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-arginine N2-succinyltransferase activity","type":"related"}],"termid":"GO:0008791"}


id: PBO:0039969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A","termid":"PBO:0039969"}


id: SO:0000886
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recoded mRNA where a block of nucleotides is not translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_by_translational_bypass","synonyms":[{"name":"recoded by translational bypass","type":"exact"}],"termid":"SO:0000886"}


id: MONDO:0015353
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87056],"is_not":false,"summary":null,"term":"MONDO:0015353"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, type 5","termid":"MONDO:0100350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 5A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600794","DOID:0111204","GARD:18266"],"synonyms":[{"name":"HMN 5A","type":"exact"},{"name":"HMN5A","type":"exact"},{"name":"dHMN 5A","type":"exact"},{"name":"dHMN5","type":"broad"},{"name":"distal HMN V","type":"broad"},{"name":"distal hereditary motor neuropathy type V","type":"broad"},{"name":"distal spinal muscular atrophy type 5","type":"broad"},{"name":"neuronopathy, distal hereditary motor, type 5","type":"broad"},{"name":"neuronopathy, distal hereditary motor, type 5A","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type VA","type":"exact"},{"name":"neuropathy, distal hereditary motor, type 5A","type":"exact"},{"name":"spinal muscular atrophy, distal, type 5","type":"broad"},{"name":"spinal muscular atrophy, distal, type 5A","type":"exact"},{"name":"spinal muscular atrophy, distal, with upper limb predominance","type":"exact"}],"termid":"MONDO:0015353","terms_by_termid":{"MONDO:0015353":null},"xrefs":{"Monarch":{"xref_id":"0015353"}}}


id: MONDO:0015042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoma","termid":"MONDO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"primary plasmacytoma of the bone","secondary_identifiers":["GARD:19739","Orphanet:100021"],"termid":"MONDO:0015042","xrefs":{"Monarch":{"xref_id":"0015042"}}}


id: PBO:0086904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative type-1 protein phosphatase targeting subunit; tethers Glc7p type-1 protein phosphatase to Gsy2p glycogen synthase; PIG2 has a paralog, GIP2, that arose from the whole genome duplication","termid":"PBO:0086904"}


id: PBO:0050057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, X (pseudogene)","termid":"PBO:0050057"}


id: GO:0032578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an aleurone grain.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"aleurone grain membrane","termid":"GO:0032578"}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: GO:1905133
data:
  {"annotated_genes":["SJAG_01515","SJAG_01837","SJAG_03327","SJAG_01082","SJAG_04126","SJAG_01330","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116337,108125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[118512,77062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[100475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[115627],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[103133],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw","PMID:15620645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic chromosome separation","termid":"GO:1905132"},{"relation_name":"is_a","term_name":"negative regulation of chromosome separation","termid":"GO:1905819"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromosome separation during meiosis","type":"exact"},{"name":"down regulation of meiotic chromosome resolution","type":"exact"},{"name":"down regulation of meiotic chromosome separation","type":"exact"},{"name":"down-regulation of chromosome separation during meiosis","type":"exact"},{"name":"down-regulation of meiotic chromosome resolution","type":"exact"},{"name":"down-regulation of meiotic chromosome separation","type":"exact"},{"name":"downregulation of chromosome separation during meiosis","type":"exact"},{"name":"downregulation of meiotic chromosome resolution","type":"exact"},{"name":"downregulation of meiotic chromosome separation","type":"exact"},{"name":"inhibition of chromosome separation during meiosis","type":"narrow"},{"name":"inhibition of meiotic chromosome resolution","type":"narrow"},{"name":"inhibition of meiotic chromosome separation","type":"narrow"},{"name":"negative regulation of chromosome separation during meiosis","type":"exact"},{"name":"negative regulation of meiotic chromosome resolution","type":"exact"}],"termid":"GO:1905133","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: MONDO:1010351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related macular degeneration that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related macular degeneration, non-human animal","secondary_identifiers":["OMIA:002142"],"termid":"MONDO:1010351","xrefs":{"Monarch":{"xref_id":"1010351"}}}


id: GO:1900440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"}


id: MONDO:0045040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locational disease characteristic","termid":"MONDO:0045040","xrefs":{"Monarch":{"xref_id":"0045040"}}}


id: MONDO:0022693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral calcification cerebellar hypoplasia","termid":"MONDO:0022693","xrefs":{"Monarch":{"xref_id":"0022693"}}}


id: PBO:0077783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I pseudogene 1","termid":"PBO:0077783"}


id: MONDO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"WT limb-blood syndrome is characterized by hematological anomalies (Fanconi anemia, leukemia and lymphoma) often appearing during childhood. Anomalies of the limbs and hands are also present: bifid or hypoplastic thumbs, cutaneous syndactyly, and ulnar and radial defects. The syndrome has been described in several families. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:3466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"WT limb-blood syndrome","secondary_identifiers":["icd11.foundation:1407849410","MEDGEN:231231","OMIM:194350","MESH:C536751","SCTID:719019000","UMLS:C1327917","GARD:39"],"synonyms":[{"name":"WT limb blood syndrome","type":"related"},{"name":"WT limb-blood syndrome","type":"exact"},{"name":"WTsyndrome","type":"related"},{"name":"radial-ulnar hypoplasia with bone marrow failure and/or leukaemia","type":"related"},{"name":"radial-ulnar hypoplasia with bone marrow failure and/or leukemia","type":"related"}],"termid":"MONDO:0008688","xrefs":{"Monarch":{"xref_id":"0008688"}}}


id: SO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any of the DNA segments produced by discontinuous synthesis of the lagging strand during DNA replication.","definition_xrefs":["ISBN:0805350152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Okazaki_fragment","synonyms":[{"name":"Okazaki fragment","type":"exact"}],"termid":"SO:0001985"}


id: PBO:0066333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 and BTB domain containing protein 2","termid":"PBO:0066333"}


id: GO:0003904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclobutadipyrimidine (in DNA) = 2 pyrimidine residues (in DNA). This reaction represents the reactivation of irradiated DNA by light.","definition_xrefs":["EC:4.1.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA photolyase activity","termid":"GO:0003913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"deoxyribodipyrimidine photo-lyase activity","secondary_identifiers":["RHEA:10672"],"synonyms":[{"name":"CPD photolyase activity","type":"exact"},{"name":"DNA cyclobutane dipyrimidine photolyase activity","type":"related"},{"name":"DNA-photoreactivating enzyme","type":"related"},{"name":"PRE","type":"related"},{"name":"PhrB photolyase activity","type":"related"},{"name":"deoxyribocyclobutadipyrimidine pyrimidine-lyase activity","type":"related"},{"name":"deoxyribodipyrimidine photolyase activity","type":"exact"},{"name":"deoxyribonucleate pyrimidine dimer lyase (photosensitive)","type":"related"},{"name":"deoxyribonucleic cyclobutane dipyrimidine photolyase activity","type":"related"},{"name":"deoxyribonucleic photolyase activity","type":"related"},{"name":"dipyrimidine photolyase (photosensitive)","type":"related"},{"name":"photolyase activity","type":"related"},{"name":"photoreactivating enzyme activity","type":"related"},{"name":"phr A photolyase activity","type":"related"}],"termid":"GO:0003904"}


id: PBO:0038518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF2-H2BK1 readthrough","termid":"PBO:0038518"}


id: FYPO:0008129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of two methyl groups to the N2 position of a guanine residue in a tRNA molecule is increased. Normally, two methyl groups are transferred to the G26 residue.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased tRNA guanosine N2,N2-dimethylation","termid":"FYPO:0008129"}


id: GO:0016296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanoyl-[ACP] + H2O = H+ + hexadecanoate + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0016296)","synonyms":[{"name":"palmitoyl-ACP hydrolase activity","type":"exact"},{"name":"palmitoyl-[acyl-carrier protein] hydrolase activity","type":"exact"}],"termid":"GO:0016296"}


id: PR:Q9UTC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC227.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTC2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C227.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.17c","synonyms":[{"name":"Spom972h-SPAC227.17c","type":"exact"}],"termid":"PR:Q9UTC2"}


id: GO:1990717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the 9+2 axoneme, that occurs in most motile cilia, consisting of the two bridges which connect the central pair of single microtubules.","definition_xrefs":["GOC:cilia","PMID:21586547","PMID:9295136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal central apparatus","termid":"GO:1990716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal central bridge","termid":"GO:1990717"}


id: PBO:0044267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 6","termid":"PBO:0044267"}


id: PBO:0054008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1338","termid":"PBO:0054008"}


id: GO:0044323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a retinoic acid-responsive element, a variable direct repeat of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.","definition_xrefs":["PMID:11327309","GOC:vw","PMID:19917671","GOC:yaf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"retinoic acid-responsive element binding","synonyms":[{"name":"RARE binding","type":"exact"}],"termid":"GO:0044323"}


id: PBO:0065109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C delta","termid":"PBO:0065109"}


id: MONDO:0009951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiculoneuropathy, fatal neonatal","secondary_identifiers":["OMIM:266250","MESH:C564857","MEDGEN:376592","UMLS:C1849471"],"synonyms":[{"name":"Radiculoneuropathy, fatal neonatal","type":"exact"}],"termid":"MONDO:0009951","xrefs":{"Monarch":{"xref_id":"0009951"}}}


id: PBO:0068946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 190, pseudogene","termid":"PBO:0068946"}


id: PBO:0048780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 11","termid":"PBO:0048780"}


id: MONDO:0600011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of hypophosphatasia characterized by low alkaline phosphatase, unspecific clinical signs, and typically presents in individuals in adulthood. It is autosomal dominantly inherited.","definition_xrefs":["PMID:32973344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ALPL-related autosomal dominant hypophosphatasia","termid":"MONDO:0100608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"mild hypophosphatasia","synonyms":[{"name":"attenuated hypophosphatasia","type":"exact"}],"termid":"MONDO:0600011","xrefs":{"Monarch":{"xref_id":"0600011"}}}


id: PBO:0086907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative vacuolar membrane transporter for cationic amino acids; involved in vacuolar export of arginine under nitrogen starvation conditions; appears to be inactive under nitrogen replete conditions; may contribute to amino acid homeostasis; vacuolar membrane protein; member of the PQ-loop family, containing seven transmembrane domains; homologous to the human lysosomal cationic amino acid exporter PQLC2; null mutant is functionally complemented by the rat PQLC2 vacuolar transporter","termid":"PBO:0086907"}


id: PBO:0041219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 specific chaperone 1","termid":"PBO:0041219"}


id: PBO:0048277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 13","termid":"PBO:0048277"}


id: GO:0071122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular endothelial growth factor A.","definition_xrefs":["PMID:17363377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-VEGF-A complex","synonyms":[{"name":"ITGA9-ITGB1-VEGFA complex","type":"narrow"}],"termid":"GO:0071122"}


id: MONDO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bilirubin, serum level of, quantitative trait locus 1 (obsolete MONDO:0044270)","secondary_identifiers":["OMIM:601816"],"synonyms":[{"name":"BILIQTL1","type":"related"},{"name":"bilirubin, serum level OF, quantitative trait locus 1","type":"related"},{"name":"bilirubin, serum level of, QTL1","type":"exact"}],"termid":"MONDO:0044270","xrefs":{"Monarch":{"xref_id":"0044270"}}}


id: MONDO:0000860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neural tube defect (obsolete MONDO:0000860)","termid":"MONDO:0000860","xrefs":{"Monarch":{"xref_id":"0000860"}}}


id: GO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + carnitine = (R)-O-acetylcarnitine + CoA.","definition_xrefs":["EC:2.3.1.7","RHEA:21136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"carnitine O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02396","Reactome:R-HSA-390291","GO:0004093","Reactome:R-HSA-390284","GO:0004094","MetaCyc:CARNITINE-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"CATC","type":"related"},{"name":"acetyl-CoA-carnitine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:carnitine O-acetyltransferase activity","type":"related"},{"name":"acetylcarnitine transferase activity","type":"related"},{"name":"carnitine O-acetyltransferase I activity","type":"narrow"},{"name":"carnitine O-acetyltransferase II activity","type":"narrow"},{"name":"carnitine acetyl coenzyme A transferase activity","type":"related"},{"name":"carnitine acetylase activity","type":"related"},{"name":"carnitine acetyltransferase activity","type":"related"},{"name":"carnitine-acetyl-CoA transferase activity","type":"related"}],"termid":"GO:0004092"}


id: PBO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb1 (predicted)","termid":"PBO:0002094"}


id: PBO:0054506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1906","termid":"PBO:0054506"}


id: GO:0009788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of abscisic acid (ABA) signaling.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid-activated signaling pathway","termid":"GO:0009787"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to alcohol","termid":"GO:1905958"},{"relation_name":"negatively_regulates","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of abscisic acid-activated signaling pathway","synonyms":[{"name":"down regulation of abscisic acid mediated signaling","type":"exact"},{"name":"down-regulation of abscisic acid mediated signaling","type":"exact"},{"name":"downregulation of abscisic acid mediated signaling","type":"exact"},{"name":"inhibition of abscisic acid mediated signaling","type":"narrow"},{"name":"negative regulation of abscisic acid mediated signaling pathway","type":"related"},{"name":"negative regulation of abscisic acid mediated signalling","type":"exact"}],"termid":"GO:0009788"}


id: PBO:0057253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 454","termid":"PBO:0057253"}


id: MONDO:0016530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital malformation in the larynx. It is characterized by the presence of an air-filled sac within the laryngeal wall which may bulge on the neck.","definition_xrefs":["NCIT:C97062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngocele","secondary_identifiers":["GARD:3191","ICD10CM:Q31.3","MedDRA:10023885","UMLS:C0265761","icd11.foundation:360056769","SCTID:51523009","MESH:D059608","MEDGEN:452345","ICD9:748.3","Orphanet:2372"],"termid":"MONDO:0016530","xrefs":{"Monarch":{"xref_id":"0016530"}}}


id: MONDO:0001363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blind hypertensive eye","secondary_identifiers":["SCTID:264008","DOID:11776","ICD9:360.42","UMLS:C0154789","MEDGEN:509660"],"termid":"MONDO:0001363","xrefs":{"Monarch":{"xref_id":"0001363"}}}


id: PBO:0075858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 6, pseudogene","termid":"PBO:0075858"}


id: GO:0061664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of Pup to a substrate protein via the reaction X-Pup + S = X + S-Pup, where X is either an E2 or E3 enzyme, the X-Pup linkage is a thioester bond, and the S-Pup linkage is an isopeptide bond between the C-terminal amino acid of Pup and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"},{"relation_name":"is_a","term_name":"Pup transferase activity","termid":"GO:0072496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0019787","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"Pup ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061664"}


id: PBO:0076535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 62 pseudogene","termid":"PBO:0076535"}


id: PBO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf2","termid":"PBO:0000975"}


id: PBO:0004615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg8","termid":"PBO:0004615"}


id: FYPO:0003031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"mating without nitrogen starvation","synonyms":[{"name":"conjugation without nitrogen starvation","type":"exact"},{"name":"mating in the absence of nitrogen starvation","type":"exact"},{"name":"mating without nitrogen depletion","type":"exact"},{"name":"mating without nitrogen deprivation","type":"exact"}],"termid":"FYPO:0003031"}


id: MONDO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm characterized by then presence of atypical giant cells.","definition_xrefs":["NCIT:C4090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant cell tumor","termid":"MONDO:0002171"},{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant giant cell tumor","secondary_identifiers":["MEDGEN:90745","UMLS:C0334229","DOID:2705","ICDO:8003/3"],"synonyms":[{"name":"giant cell tumor, malignant","type":"exact"},{"name":"malignant giant cell neoplasm","type":"exact"},{"name":"malignant giant cell tumor","type":"exact"},{"name":"malignant tumor, giant cell type","type":"exact"},{"name":"malignant tumor, giant cell type (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002402","xrefs":{"Monarch":{"xref_id":"0002402"}}}


id: PR:O13878
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 75 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02060","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.13","secondary_identifiers":["UniProtKB:O13878"],"synonyms":[{"name":"Spom972h-WDR75","type":"exact"},{"name":"U3 protein 17 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13878"}


id: GO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the red nucleus of the midbrain towards target cells in the spinal cord.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rubrospinal tract morphogenesis","termid":"GO:0021964"}


id: PBO:0054769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2181","termid":"PBO:0054769"}


id: GO:0033577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in the endoplasmic reticulum.","definition_xrefs":["GOC:mah","GOC:pr","PMID:12042244"],"gene_count":0,"genotype_count":0,"name":"obsolete protein glycosylation in endoplasmic reticulum (obsolete GO:0033577)","synonyms":[{"name":"core glycosylation","type":"related"},{"name":"protein amino acid glycosylation in ER","type":"exact"},{"name":"protein amino acid glycosylation in endoplasmic reticulum","type":"exact"}],"termid":"GO:0033577"}


id: PBO:0057062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 146a","termid":"PBO:0057062"}


id: FYPO:0006955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular glutamine level","synonyms":[{"name":"increased cellular L-glutamine level","type":"exact"},{"name":"increased cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutamine level during vegetative growth","type":"exact"},{"name":"increased glutamine accumulation","type":"related"}],"termid":"FYPO:0006955"}


id: FYPO:0002395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin at centromere outer repeat","termid":"FYPO:0002386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"abnormal maintenance of protein localization to heterochromatin at centromere otr","type":"exact"},{"name":"abnormal maintenance of protein localization to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"abnormal maintenance of protein localization to heterochromatin at pericentric region","type":"related"},{"name":"abnormal maintenance of protein localization to heterochromatin at pericentromeric region","type":"related"},{"name":"decreased maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced maintenance of protein localization to heterochromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0002395"}


id: GO:1900653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of demethylkotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of demethylkotanin biosynthetic process","termid":"GO:1900652"},{"relation_name":"negatively_regulates","term_name":"demethylkotanin biosynthetic process","termid":"GO:1900599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of demethylkotanin biosynthetic process","synonyms":[{"name":"down regulation of demethylkotanin anabolism","type":"exact"},{"name":"down regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"down regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"down regulation of demethylkotanin formation","type":"exact"},{"name":"down regulation of demethylkotanin synthesis","type":"exact"},{"name":"down-regulation of demethylkotanin anabolism","type":"exact"},{"name":"down-regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"down-regulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"down-regulation of demethylkotanin formation","type":"exact"},{"name":"down-regulation of demethylkotanin synthesis","type":"exact"},{"name":"downregulation of demethylkotanin anabolism","type":"exact"},{"name":"downregulation of demethylkotanin biosynthesis","type":"exact"},{"name":"downregulation of demethylkotanin biosynthetic process","type":"exact"},{"name":"downregulation of demethylkotanin formation","type":"exact"},{"name":"downregulation of demethylkotanin synthesis","type":"exact"},{"name":"inhibition of demethylkotanin anabolism","type":"exact"},{"name":"inhibition of demethylkotanin biosynthesis","type":"exact"},{"name":"inhibition of demethylkotanin biosynthetic process","type":"narrow"},{"name":"inhibition of demethylkotanin formation","type":"exact"},{"name":"inhibition of demethylkotanin synthesis","type":"exact"},{"name":"negative regulation of demethylkotanin anabolism","type":"exact"},{"name":"negative regulation of demethylkotanin biosynthesis","type":"exact"},{"name":"negative regulation of demethylkotanin formation","type":"exact"},{"name":"negative regulation of demethylkotanin synthesis","type":"exact"}],"termid":"GO:1900653"}


id: MONDO:0019936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare otorhinolaryngological malformation (obsolete MONDO:0019936)","secondary_identifiers":["Orphanet:96333"],"termid":"MONDO:0019936","xrefs":{"Monarch":{"xref_id":"0019936"}}}


id: PBO:0040861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLVRB pseudogene 1","termid":"PBO:0040861"}


id: GO:0098792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of intracellular pathogen or some part of an intracellular pathogen (e.g. viral capsid) by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:20159618","PMID:19802565","GOC:pad","GOC:PARL","PMID:25497060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"},{"relation_name":"part_of","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"xenophagy","termid":"GO:0098792"}


id: PBO:0005472
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthetic Lethal with Rad2 mutant","termid":"PBO:0005472"}


id: PBO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrimin","termid":"PBO:0061577"}


id: MONDO:0004852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gonococcal endophthalmia","termid":"MONDO:0004853"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"corneal infection","termid":"MONDO:0023865"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"gonococcal keratitis","secondary_identifiers":["icd11.foundation:200847304","DOID:9697","ICD9:098.43","ICD10CM:A54.33","SCTID:40149008","MEDGEN:509209","UMLS:C0153214"],"termid":"MONDO:0004852","xrefs":{"Monarch":{"xref_id":"0004852"}}}


id: PBO:0090829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha/beta hydrolase fold","termid":"PBO:0090829"}


id: PBO:0077502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 220","termid":"PBO:0077502"}


id: GO:0005762
data:
  {"annotated_genes":["SJAG_02071","SJAG_03402","SJAG_01727","SJAG_01719","SJAG_02836","SJAG_00497","SJAG_05270","SJAG_02762","SJAG_01591","SJAG_03459","SJAG_01463","SJAG_01478","SJAG_05573","SJAG_01045","SJAG_04216","SJAG_04019","SJAG_03040","SJAG_06253","SJAG_05218","SJAG_05244","SJAG_04207","SJAG_03649","SJAG_00799","SJAG_04889","SJAG_03636","SJAG_03297","SJAG_00315","SJAG_04493","SJAG_01829","SJAG_01413","SJAG_03284","SJAG_01303","SJAG_03176","SJAG_07009","SJAG_00844","SJAG_01630","SJAG_04689","SJAG_06110","SJAG_00086","SJAG_01473","SJAG_03192","SJAG_04244","SJAG_04893","SJAG_04490"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68295,71303,72444,72886,73499,73827,74150,74484,74745,76503,77071,77298,78302,78331,78982,79578,79814,79842,80125,80942,81102,81419,81554,82131,98377,99742,99763,105478,107510,108567,109894,109993,110043,111664,112602,112932,114057,114560,115286,116431,116549,117993,118102,119767],"is_not":false,"summary":null,"term":"GO:0005762"}]},"cv_name":"cellular_component","definition":"The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar large ribosomal subunit","termid":"GO:0000315"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00086":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01829":null,"SJAG_02071":null,"SJAG_02762":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04689":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_05218":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739","GO:0032991"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"39S ribosomal subunit, mitochondrial","type":"narrow"}],"termid":"GO:0005762","terms_by_termid":{"GO:0005762":null}}


id: PBO:0045132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 2","termid":"PBO:0045132"}


id: MONDO:1010528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, horse","secondary_identifiers":["OMIA:000197-9796"],"termid":"MONDO:1010528","xrefs":{"Monarch":{"xref_id":"1010528"}}}


id: PBO:0085828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; GFP-fusion protein localizes to the mitochondria; null mutant is viable and displays reduced frequency of mitochondrial genome loss","termid":"PBO:0085828"}


id: PBO:0048008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD6 antisense RNA 2","termid":"PBO:0048008"}


id: PBO:0028058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint_during_cellular_response_to_hydroxyurea","termid":"PBO:0028058"}


id: PBO:0056291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANSC domain containing 4","termid":"PBO:0056291"}


id: FYPO:0007403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anaphase-promoting complex (APC) is present for longer than normal. The APC normally forms in prometaphase and disassembles before anaphase; in mutants it may remain present during anaphase.","definition_xrefs":["PMID:24583014","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of anaphase-promoting complex presence","synonyms":[{"name":"APC present during mitotic anaphase","type":"narrow"},{"name":"increased duration of APC presence","type":"exact"},{"name":"increased duration of anaphase-promoting complex presence during mitotic cell cycle","type":"related"},{"name":"increased duration of anaphase-promoting complex presence during vegetative growth","type":"exact"},{"name":"increased persistence of anaphase-promoting complex","type":"related"}],"termid":"FYPO:0007403"}


id: PBO:0050576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 1","termid":"PBO:0050576"}


id: PBO:0090613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint kinase Cds1","termid":"PBO:0090613"}


id: PR:Q10273
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G7.09c gene.","definition_xrefs":["UniProtKB:Q10273","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.09c","synonyms":[{"name":"Spom972h-SPAC13G7.09c","type":"exact"}],"termid":"PR:Q10273"}


id: GO:0052693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epoxyqueuosine in tRNA + reductant = queuosine in tRNA + oxidised reductant.","definition_xrefs":["PMID:21502530","RHEA:32159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"epoxyqueuosine reductase activity","secondary_identifiers":["EC:1.17.99.6"],"termid":"GO:0052693"}


id: GO:0030729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + ATP + CoA = acetoacetyl-CoA + AMP + diphosphate + H+.","definition_xrefs":["RHEA:16117","EC:6.2.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"acetoacetate-CoA ligase activity","secondary_identifiers":["Reactome:R-HSA-5694494","MetaCyc:ACETOACETATE--COA-LIGASE-RXN","KEGG_REACTION:R01357"],"synonyms":[{"name":"acetoacetate:CoA ligase (AMP-forming)","type":"related"},{"name":"acetoacetyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0030729"}


id: GO:0030264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA.","definition_xrefs":["GOC:tb","ISBN:0721639976","GOC:dph","GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"part_of","term_name":"apoptotic nuclear changes","termid":"GO:0030262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear fragmentation involved in apoptotic nuclear change","synonyms":[{"name":"apoptotic nuclear fragmentation","type":"exact"},{"name":"nuclear fragmentation during apoptosis","type":"related"},{"name":"nucleus fragmentation","type":"exact"}],"termid":"GO:0030264"}


id: GO:0070738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glycine residues to a specific glutamate residue on a target tubulin molecule; acts on alpha or beta tubulin.","definition_xrefs":["GOC:mah","PMID:19524510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glycine ligase activity","termid":"GO:0070735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"tubulin-glycine ligase activity","synonyms":[{"name":"tubulin glycylase activity","type":"exact"}],"termid":"GO:0070738"}


id: GO:1900248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation","termid":"GO:1900247"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translation","termid":"GO:2000766"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational elongation","synonyms":[{"name":"down regulation of cytoplasmic translational elongation","type":"exact"},{"name":"down-regulation of cytoplasmic translational elongation","type":"exact"},{"name":"downregulation of cytoplasmic translational elongation","type":"exact"},{"name":"inhibition of cytoplasmic translational elongation","type":"narrow"}],"termid":"GO:1900248"}


id: GO:0060286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell motility due to the motion of one or more flagella.","definition_xrefs":["GOC:mlg","GOC:dph","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellar cell motility (obsolete GO:0060286)","synonyms":[{"name":"flagellar cell motility","type":"exact"}],"termid":"GO:0060286"}


id: PBO:0070890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 22","termid":"PBO:0070890"}


id: GO:0097441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that emerges near the basal pole of a neuron. In bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon.","definition_xrefs":["GOC:aruk","PMID:17046728","PMID:22683681","GOC:bc","NIF_Subcellular:sao1079900774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal dendrite","synonyms":[{"name":"basilar dendrite","type":"exact"}],"termid":"GO:0097441"}


id: MONDO:0012440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 10","secondary_identifiers":["UMLS:C1857752","OMIM:610208","MEDGEN:341839"],"synonyms":[{"name":"Mgr10","type":"related"},{"name":"migraine with or without aura, susceptibility to, 10","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 10","type":"exact"},{"name":"migraine with pulsation","type":"related"}],"termid":"MONDO:0012440","xrefs":{"Monarch":{"xref_id":"0012440"}}}


id: PBO:0075646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY4 antisense RNA 1","termid":"PBO:0075646"}


id: MONDO:0007893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multisystem genetic disorder characterized by lentigines, hypertrophic cardiomyopathy, short stature, pectus deformity, and dysmorphic facial features.","definition_xrefs":["Orphanet:500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome with multiple lentigines","secondary_identifiers":["OMIMPS:151100","MEDGEN:104494","SCTID:111306001","DOID:14291","NCIT:C84820","UMLS:C0175704","ICD9:709.09","MESH:D044542","NORD:1360","MedDRA:10062901","GARD:1100"],"synonyms":[{"name":"Capute-Rimoin-Konigsmark-Esterly-Richardson syndrome","type":"exact"},{"name":"Cardiomyopathic lentiginosis","type":"exact"},{"name":"Gorlin syndrome II","type":"exact"},{"name":"LEOPARD syndrome","type":"exact"},{"name":"Moynahan syndrome","type":"related"},{"name":"Noonan syndrome with multiple lentigines","type":"exact"},{"name":"familial multiple lentigines syndrome","type":"exact"},{"name":"generalised lentiginosis","type":"exact"},{"name":"generalized lentiginosis","type":"exact"},{"name":"lentigines, electrocardiographic conduction abnormalities, ocular hypertelorism, pulmonic stenosis, abnormal genitalia, retardation of growth, Deafnes","type":"related"},{"name":"lentigines, electrocardiographic conduction defects, 0cular hypertelorism, pulmonary stenosis, abnormalities of the genitals, retarded Growth, deafness","type":"exact"},{"name":"lentiginosis profusa syndrome","type":"exact"},{"name":"progressive cardiomyopathic lentiginosis","type":"exact"}],"termid":"MONDO:0007893","xrefs":{"Monarch":{"xref_id":"0007893"}}}


id: GO:1902356
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The directed movement of oxaloacetate(2-) across a membrane.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:18682385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate transport","termid":"GO:0015729"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"oxaloacetate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902356","terms_by_termid":{"GO:1990555":null}}


id: PBO:0044874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4B","termid":"PBO:0044874"}


id: GO:0007486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the female genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived genitalia development","termid":"GO:0007484"},{"relation_name":"is_a","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived female genitalia development","synonyms":[{"name":"female genital development","type":"broad"}],"termid":"GO:0007486"}


id: GO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a growth cone in an injured axon.","definition_xrefs":["GOC:dph","GOC:lm","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of growth cone in injured axon","termid":"GO:0048689"}


id: GO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis","synonyms":[{"name":"activation of receptor mediated endocytosis","type":"narrow"},{"name":"positive regulation of receptor mediated endocytosis","type":"exact"},{"name":"stimulation of receptor mediated endocytosis","type":"narrow"},{"name":"up regulation of receptor mediated endocytosis","type":"exact"},{"name":"up-regulation of receptor mediated endocytosis","type":"exact"},{"name":"upregulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048260"}


id: PBO:0090114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53","termid":"PBO:0090114"}


id: PBO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-1","termid":"PBO:0001687"}


id: GO:1905513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:15470145","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of short-term synaptic potentiation","termid":"GO:1905512"},{"relation_name":"negatively_regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of short-term synaptic potentiation","synonyms":[{"name":"down regulation of short-term synaptic potentiation","type":"exact"},{"name":"down regulation of synaptic facilitation","type":"exact"},{"name":"down-regulation of short-term synaptic potentiation","type":"exact"},{"name":"down-regulation of synaptic facilitation","type":"exact"},{"name":"downregulation of short-term synaptic potentiation","type":"exact"},{"name":"downregulation of synaptic facilitation","type":"exact"},{"name":"inhibition of short-term synaptic potentiation","type":"narrow"},{"name":"inhibition of synaptic facilitation","type":"narrow"},{"name":"negative regulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905513"}


id: FYPO:0008154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric heterochromatin is normal (i.e. indistinguishable from wild type.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}


id: MONDO:0001223
data:
  {"annotated_genes":["SJAG_04978","SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[87402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[87614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"},{"annotations":[86730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"A disease involving the parathyroid gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01151":null,"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"parathyroid gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D010279","UMLS:C4025822","ICD9:252.8","SCTID:73132005","DOID:11201","EFO:0005754","ICD9:252","ICD9:252.9","NCIT:C26844","MEDGEN:893009"],"synonyms":[{"name":"disease of parathyroid gland","type":"exact"},{"name":"disease of parathyroid glands","type":"exact"},{"name":"disease or disorder of parathyroid gland","type":"exact"},{"name":"disorder of parathyroid gland","type":"exact"},{"name":"parathyroid disease","type":"exact"},{"name":"parathyroid gland disease","type":"exact"},{"name":"parathyroid gland disease or disorder","type":"exact"},{"name":"parathyroid gland diseases","type":"exact"},{"name":"parathyroid gland disorder","type":"exact"},{"name":"parathyroid gland disorders","type":"exact"}],"termid":"MONDO:0001223","terms_by_termid":{"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0011301":null,"MONDO:0012004":null},"xrefs":{"Monarch":{"xref_id":"0001223"}}}


id: PBO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 4","termid":"PBO:0048538"}


id: PBO:0060309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin regulatory light chain interacting protein","termid":"PBO:0060309"}


id: MONDO:0005323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bacterial diseases that are potentially transmitted or propagated by sexual conduct.","definition_xrefs":["MESH:D015231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"sexually transmitted disease","termid":"MONDO:0021681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial sexually transmitted disease","secondary_identifiers":["UMLS:C0036917","EFO:0003955","MEDGEN:20728"],"termid":"MONDO:0005323","xrefs":{"Monarch":{"xref_id":"0005323"}}}


id: GO:2000601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["PMID:21454476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Arp2/3 complex-mediated actin nucleation","termid":"GO:0034315"},{"relation_name":"is_a","term_name":"positive regulation of actin nucleation","termid":"GO:0051127"},{"relation_name":"positively_regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"positive regulation of actin filament branch nucleation","type":"exact"},{"name":"positive regulation of branched actin filament nucleation","type":"exact"}],"termid":"GO:2000601"}


id: MONDO:1011901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"white skin color and iridophoroma, non-human animal","secondary_identifiers":["OMIA:002363"],"termid":"MONDO:1011901","xrefs":{"Monarch":{"xref_id":"1011901"}}}


id: GO:0045655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte differentiation","termid":"GO:0045655"}


id: PBO:0079255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 27","termid":"PBO:0079255"}


id: PATO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"young","termid":"PATO:0000309"}


id: GO:1905494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["GO_REF:0000059","PMID:26503245","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-quadruplex DNA binding (obsolete GO:1905494)","synonyms":[{"name":"down regulation of G quadruplex DNA binding","type":"exact"},{"name":"down regulation of G quartet DNA binding","type":"exact"},{"name":"down regulation of G-DNA binding","type":"exact"},{"name":"down regulation of G-quadruplex DNA binding","type":"exact"},{"name":"down regulation of G-quartet DNA binding","type":"exact"},{"name":"down regulation of quadruplex DNA binding","type":"exact"},{"name":"down regulation of tetraplex DNA binding","type":"exact"},{"name":"down-regulation of G quadruplex DNA binding","type":"exact"},{"name":"down-regulation of G quartet DNA binding","type":"exact"},{"name":"down-regulation of G-DNA binding","type":"exact"},{"name":"down-regulation of G-quadruplex DNA binding","type":"exact"},{"name":"down-regulation of G-quartet DNA binding","type":"exact"},{"name":"down-regulation of quadruplex DNA binding","type":"exact"},{"name":"down-regulation of tetraplex DNA binding","type":"exact"},{"name":"downregulation of G quadruplex DNA binding","type":"exact"},{"name":"downregulation of G quartet DNA binding","type":"exact"},{"name":"downregulation of G-DNA binding","type":"exact"},{"name":"downregulation of G-quadruplex DNA binding","type":"exact"},{"name":"downregulation of G-quartet DNA binding","type":"exact"},{"name":"downregulation of quadruplex DNA binding","type":"exact"},{"name":"downregulation of tetraplex DNA binding","type":"exact"},{"name":"inhibition of G quadruplex DNA binding","type":"narrow"},{"name":"inhibition of G quartet DNA binding","type":"narrow"},{"name":"inhibition of G-DNA binding","type":"narrow"},{"name":"inhibition of G-quadruplex DNA binding","type":"narrow"},{"name":"inhibition of G-quartet DNA binding","type":"narrow"},{"name":"inhibition of quadruplex DNA binding","type":"narrow"},{"name":"inhibition of tetraplex DNA binding","type":"narrow"},{"name":"negative regulation of G quadruplex DNA binding","type":"exact"},{"name":"negative regulation of G quartet DNA binding","type":"exact"},{"name":"negative regulation of G-DNA binding","type":"exact"},{"name":"negative regulation of G-quartet DNA binding","type":"exact"},{"name":"negative regulation of quadruplex DNA binding","type":"exact"},{"name":"negative regulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905494"}


id: GO:0036116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006629","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA catabolic process","synonyms":[{"name":"long-chain fatty-acyl-CoA breakdown","type":"exact"},{"name":"long-chain fatty-acyl-CoA catabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036116"}


id: PR:O74471
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox13 gene.","definition_xrefs":["UniProtKB:O74471","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.09c","synonyms":[{"name":"Spom972h-cox13","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74471"}


id: FYPO:0002515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated, branched germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable branched, elongated vegetative cell","termid":"FYPO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with branched, elongated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, branched, elongated cell","type":"exact"},{"name":"inviable following spore germination with elongated, branched germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, branched germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with branched, elongated germ tube","type":"exact"}],"termid":"FYPO:0002515"}


id: MONDO:0100162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any recessive immunodeficiency (ID), with or without ectodermal dysplasia (EDA), in which the cause of the disease is mutation in the IKBKG gene. ID/EDA-ID patients, always males, are hemizygous for an IKBKG (NEMO) mutation that preserves residual NF-κB activation (hypomorphic mutations) and may also present with osteopetrosis and lymphoedema (OL-EDA-ID).","definition_xrefs":["PMID:11047757","PMID:35163099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IKBKG-related immunodeficiency with or without ectodermal dysplasia","synonyms":[{"name":"NEMO related ID/EDA-ID","type":"exact"}],"termid":"MONDO:0100162","xrefs":{"Monarch":{"xref_id":"0100162"}}}


id: PBO:0027186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_during_vegetative_growth","termid":"PBO:0027186"}


id: SO:1000017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G, or vice versa.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transversion","secondary_identifiers":["http://en.wikipedia.org/wiki/Transversion"],"termid":"SO:1000017"}


id: PBO:0031650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G1_phase_progression","termid":"PBO:0031650"}


id: GO:0071697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an ectodermal placode are generated and organized. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ectodermal placode development","termid":"GO:0071696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal placode morphogenesis","termid":"GO:0071697"}


id: PBO:0031169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_amino_acid_import","termid":"PBO:0031169"}


id: PBO:0066958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 260","termid":"PBO:0066958"}


id: GO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052223)","synonyms":[{"name":"negative chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052223"}


id: PBO:0060948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIB antisense RNA 1","termid":"PBO:0060948"}


id: GO:0075163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075163)","synonyms":[{"name":"positive regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075163"}


id: GO:0043001
data:
  {"annotated_genes":["SJAG_03970","SJAG_01114","SJAG_00916","SJAG_03838","SJAG_04609","SJAG_00144","SJAG_00858","SJAG_00330","SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71866,79280,96932,108225,108854,110615,111404,114843],"is_not":false,"summary":null,"term":"GO:0043001"},{"annotations":[89855],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi to plasma membrane transport","termid":"GO:0006893"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"},{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_03838":null,"SJAG_03970":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043001","terms_by_termid":{"GO:0042997":null,"GO:0043001":null}}


id: PBO:0056710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 2","termid":"PBO:0056710"}


id: FYPO:0004730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the lateral cell cortex is observed there. The lateral cell cortex is the region directly beneath the plasma membrane of the lateral portion of the cell.","definition_xrefs":["GO:0097575","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"output_of","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to lateral cell cortex","synonyms":[{"name":"ectopic protein localization to lateral cell cortex","type":"exact"},{"name":"protein mislocalised to lateral cell cortex","type":"exact"},{"name":"protein mislocalised to lateral cell cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell side during vegetative growth","type":"related"},{"name":"protein mislocalized to lateral cell cortex during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to lateral cell cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to lateral cortex","type":"exact"}],"termid":"FYPO:0004730"}


id: MONDO:0016452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic hypersomnia without long sleep time is a sleep disorder characterized almost entirely by constant excessive daytime drowsiness lasting more than 3 months, with involuntary more or less restorative daytime naps. Night rest is of normal length or slightly prolonged but is less than 10 hours in duration, with often normal awakening.","definition_xrefs":["Orphanet:228318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hypersomnia","termid":"MONDO:0018044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypersomnia without long sleep time","secondary_identifiers":["MEDGEN:736092","SCTID:442292004","UMLS:C1561855","ICD10CM:G47.12","ICD9:327.12"],"termid":"MONDO:0016452","xrefs":{"Monarch":{"xref_id":"0016452"}}}


id: PBO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation_during_vegetative_growth","termid":"PBO:0031000"}


id: MONDO:0000756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal rhabdomyosarcoma located in the parameningeal region.","definition_xrefs":["DOID:0060338","PMID:23021437","PMID:10717216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal rhabdomyosarcoma","termid":"MONDO:0009993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"parameningeal embryonal rhabdomyosarcoma","termid":"MONDO:0000756","xrefs":{"Monarch":{"xref_id":"0000756"}}}


id: PR:Q00619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mam2 gene.","definition_xrefs":["UniProtKB:Q00619","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone P-factor receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.04","synonyms":[{"name":"Spom972h-mam2","type":"exact"}],"termid":"PR:Q00619"}


id: GO:0009833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of cellulose and pectin-containing cell walls that form adjacent to the middle lamella following cell division and during cell expansion. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0000281","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"plant-type primary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall anabolism","type":"broad"},{"name":"primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall biosynthetic process","type":"broad"},{"name":"primary cell wall formation","type":"broad"},{"name":"primary cell wall synthesis","type":"broad"}],"termid":"GO:0009833"}


id: GO:0046827
data:
  {"annotated_genes":["SJAG_01245","SJAG_04312","SJAG_01805","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95582,102228,103647,112844],"is_not":false,"summary":null,"term":"GO:0046827"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"regulation of protein export from nucleus","termid":"GO:0046825"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"positively_regulates","term_name":"protein export from nucleus","termid":"GO:0006611"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein export from nucleus","type":"narrow"},{"name":"positive regulation of protein export from cell nucleus","type":"exact"},{"name":"positive regulation of protein export out of nucleus","type":"exact"},{"name":"positive regulation of protein transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of protein-nucleus export","type":"exact"},{"name":"stimulation of protein export from nucleus","type":"narrow"},{"name":"up regulation of protein export from nucleus","type":"exact"},{"name":"up-regulation of protein export from nucleus","type":"exact"},{"name":"upregulation of protein export from nucleus","type":"exact"}],"termid":"GO:0046827","terms_by_termid":{"GO:0046827":null}}


id: PBO:0076646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX2 antisense RNA 1","termid":"PBO:0076646"}


id: PBO:0059255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L21","termid":"PBO:0059255"}


id: MONDO:0009567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marinesco-Sjogren syndrome (MSS) belongs to the group of autosomal recessive cerebellar ataxias. Cardinal features of MSS are cerebellar ataxia, congenital cataract, and delayed psychomotor development.","definition_xrefs":["Orphanet:559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive degenerative and progressive cerebellar ataxia","termid":"MONDO:0020046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"Marinesco-Sjogren syndrome","secondary_identifiers":["ICD9:742.4","DOID:0080195","UMLS:C0024814","MEDGEN:6222","SCTID:80734006","NANDO:1200485","NORD:1406","GARD:8341","OMIM:248800"],"synonyms":[{"name":"Garland-Moorhouse syndrome","type":"exact"},{"name":"MSS","type":"broad"},{"name":"Marinesco-Garland syndrome","type":"exact"},{"name":"Marinesco-Sjogren syndrome","type":"exact"},{"name":"Marinesco-Sjogren syndrome-Hypergonadotrophic hypogonadism","type":"related"},{"name":"Marinesco-Sjogren syndrome-myopathy","type":"related"},{"name":"Marinesco-Sjogren-Garland syndrome","type":"related"},{"name":"Marinesco-Sjögren syndrome","type":"related"},{"name":"Marshall Smith Syndrome","type":"exact"},{"name":"hereditary oligophrenic cerebello-lental degeneration","type":"exact"},{"name":"oligophrenic cerebellolenticular degeneration","type":"exact"}],"termid":"MONDO:0009567","xrefs":{"Monarch":{"xref_id":"0009567"}}}


id: GO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an endothelium over time, from its formation to the mature structure. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelium development","termid":"GO:0003158"}


id: PR:Q92358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt1 gene.","definition_xrefs":["UniProtKB:Q92358","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere bouquet protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.13c","synonyms":[{"name":"Spom972h-bqt1","type":"exact"},{"name":"meiotic chromosome segregation protein bqt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic recombination protein rec26 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 23 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92358"}


id: PBO:0029087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029087"}


id: MONDO:0957111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic sodium channel defect","secondary_identifiers":["Orphanet:98738","MEDGEN:1842444","GARD:19563","UMLS:C5681681"],"termid":"MONDO:0957111","xrefs":{"Monarch":{"xref_id":"0957111"}}}


id: PBO:0048908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member C, pseudogene","termid":"PBO:0048908"}


id: GO:0043739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Hydrolyzes mismatched double-stranded DNA and polynucleotides, releasing free uracil and leaving an apyrimidinic (AP) site.","definition_xrefs":["EC:3.2.2.28","PMID:24739389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil DNA N-glycosylase activity","termid":"GO:0004844"},{"relation_name":"is_a","term_name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","termid":"GO:0008263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"G/U mismatch-specific uracil-DNA glycosylase activity","synonyms":[{"name":"GU mismatch-specific uracil-DNA glycosylase activity","type":"exact"},{"name":"MUG","type":"exact"},{"name":"uracil mismatch repair protein","type":"broad"}],"termid":"GO:0043739"}


id: GO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dipyrrins (pyrromethanes), compounds containing two pyrrole rings linked through a methine, -CH=, group.","definition_xrefs":["PMID:17430001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dipyrrin metabolic process","synonyms":[{"name":"dipyrrin metabolism","type":"exact"}],"termid":"GO:0046453"}


id: MONDO:0001079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"steatorrhea","termid":"MONDO:0001075"},{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic steatorrhea","secondary_identifiers":["ICD10CM:K90.3","ICD9:579.4","MEDGEN:508909","SCTID:54576000","DOID:10610","UMLS:C0152166"],"synonyms":[{"name":"pancreatic steatorrhoea","type":"exact"}],"termid":"MONDO:0001079","xrefs":{"Monarch":{"xref_id":"0001079"}}}


id: PBO:0045648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 6","termid":"PBO:0045648"}


id: GO:0045693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryo sac central cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of embryo sac central cell differentiation","termid":"GO:0045691"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryo sac central cell differentiation","synonyms":[{"name":"activation of female gametophyte central cell differentiation","type":"narrow"},{"name":"positive regulation of female gametophyte central cell differentiation","type":"exact"},{"name":"stimulation of female gametophyte central cell differentiation","type":"narrow"},{"name":"up regulation of female gametophyte central cell differentiation","type":"exact"},{"name":"up-regulation of female gametophyte central cell differentiation","type":"exact"},{"name":"upregulation of female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0045693"}


id: PBO:0067672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 853, pseudogene","termid":"PBO:0067672"}


id: PBO:0119272
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP3","termid":"PBO:0119272"}


id: MONDO:0976123
data:
  {"annotated_genes":["SJAG_02439","SJAG_04758","SJAG_03867"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87754,87755,87756],"is_not":false,"summary":null,"term":"MONDO:0976123"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02439":null,"SJAG_03867":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301137"],"termid":"MONDO:0976123","terms_by_termid":{"MONDO:0976123":null},"xrefs":{"Monarch":{"xref_id":"0976123"}}}


id: GO:0102521
data:
  {"annotated_genes":["SJAG_04265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63787],"is_not":false,"summary":null,"term":"GO:0102521"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + S-adenosyl-L-methionine + N1-methylguanine37 in tRNAPhe = L-methionine + 5'-deoxyadenosine + carbon dioxide + H2O + 4-demethylwyosine37 in tRNAPhe.","definition_xrefs":["PMID:34184886","RHEA:36347","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"tRNA-4-demethylwyosine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:4.1.3.44","MetaCyc:RXN-14516"],"termid":"GO:0102521","terms_by_termid":{"GO:0102521":null}}


id: FYPO:0001060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamate into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import during vegetative growth","termid":"FYPO:0001059"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased glutamate import","termid":"FYPO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased glutamate import during vegetative growth","synonyms":[{"name":"decreased L-glutamate import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-glutamate import during vegetative growth","type":"exact"},{"name":"decreased glutamate import during mitotic cell cycle","type":"related"},{"name":"decreased glutamate import into cell during vegetative growth","type":"exact"},{"name":"decreased glutamate uptake during vegetative growth","type":"exact"},{"name":"reduced glutamate import during vegetative growth","type":"exact"}],"termid":"FYPO:0001060"}


id: FYPO:0005736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation is decreased.","definition_xrefs":["PomBase:mah","PMID:27630265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"decreased prospore membrane formation","synonyms":[{"name":"decreased ascospore-type prospore membrane assembly","type":"exact"},{"name":"decreased forespore membrane formation","type":"exact"},{"name":"reduced prospore membrane formation","type":"exact"}],"termid":"FYPO:0005736"}


id: PBO:0077415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 150C","termid":"PBO:0077415"}


id: MONDO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary polyadenomatosis is characterized by the presence in both breasts of multiple voluminous fibroadenomas with heterogeneous echo patterns.","definition_xrefs":["Orphanet:50920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple fibroadenoma of the breast","secondary_identifiers":["MEDGEN:816248","OMIM:615554","UMLS:C3809918"],"synonyms":[{"name":"MFAB","type":"related"},{"name":"mammary polyadenomatosis","type":"exact"},{"name":"multiple fibroadenomas of the breast","type":"related"}],"termid":"MONDO:0014249","xrefs":{"Monarch":{"xref_id":"0014249"}}}


id: GO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during action potential","termid":"GO:0086010"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}


id: PBO:0027748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_translation_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027748"}


id: GO:0039578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host JAK1 (Janus Kinase 1) activity by interacting directly and selectively with JAK1. For example, the polyoma virus T antigen binds to JAK1 and renders it inactive.","definition_xrefs":["PMID:9448289"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host JAK1 activity via JAK1 binding (obsolete GO:0039578)","termid":"GO:0039578"}


id: GO:0018414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nickel incorporation into metallo-sulfur cluster","synonyms":[{"name":"nickel incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018414"}


id: PBO:0015252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0015252"}


id: MONDO:0009929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant metabolism dysfunction, pulmonary, 1","secondary_identifiers":["OMIM:265120","GARD:17126","Orphanet:217563","UMLS:C1968602","MEDGEN:368844","MESH:C566882"],"synonyms":[{"name":"SMDP1","type":"exact"},{"name":"interstitial lung disease due to SP-B dysfunction","type":"exact"},{"name":"interstitial lung disease due to surfactant Protein B deficiency","type":"exact"},{"name":"interstitial lung disease, nonspecific, due to surfactant Protein B deficiency","type":"related"},{"name":"neonatal acute respiratory distress due to SP-B deficiency","type":"exact"},{"name":"neonatal acute respiratory distress due to surfactant protein B deficiency","type":"exact"},{"name":"pulmonary alveolar proteinosis, congenital, 1","type":"exact"},{"name":"pulmonary surfactant protein B, deficiency of","type":"related"},{"name":"surfactant metabolism dysfunction, pulmonary, 1","type":"exact"},{"name":"surfactant metabolism dysfunction, pulmonary, type 1","type":"exact"}],"termid":"MONDO:0009929","xrefs":{"Monarch":{"xref_id":"0009929"}}}


id: PBO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-F0 ATPase synthase peripheral stalk assembly factor Ina17 (predicted)","termid":"PBO:0036468"}


id: GO:0006291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excision of damaged DNA during pyrimidine-dimer repair. A large multienzyme complex scans the DNA for a distortion in the double helix rather than for a specific base change. Once a bulky lesion is found, the phosphodiester backbone of the abnormal strand is cleaved on both sides of the distortion, and the portion of the strand containing the lesion (an oligonucleotide) is peeled away from the DNA double helix by a DNA helicase enzyme.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage excision (obsolete GO:0006291)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage excision","type":"exact"}],"termid":"GO:0006291"}


id: PBO:0089342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Vma21","termid":"PBO:0089342"}


id: PBO:0029300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_N-acetyl-D-glucosaminate_level_during_G0","termid":"PBO:0029300"}


id: GO:0023029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class Ib molecules.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein binding","termid":"GO:0042287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"MHC class Ib protein binding","termid":"GO:0023029"}


id: PATO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractile quality inhering in a bearer by virtue of the bearer's elastic tension that facilitate response to stimuli.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractility","termid":"PATO:0001579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tonicity","secondary_identifiers":["PATO:0001498"],"synonyms":[{"name":"tone","type":"exact"}],"termid":"PATO:0001439"}


id: PBO:0038393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiplicity","termid":"PBO:0038393"}


id: PR:O14010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb6 gene.","definition_xrefs":["UniProtKB:O14010","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.07","synonyms":[{"name":"Spom972h-srb6","type":"exact"},{"name":"mediator complex subunit 22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 6 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14010"}


id: MONDO:1011006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukodystrophy that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy, non-human animal","termid":"MONDO:1010238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukodystrophy, sheep","secondary_identifiers":["OMIA:001130-9940"],"termid":"MONDO:1011006","xrefs":{"Monarch":{"xref_id":"1011006"}}}


id: PBO:0039126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inducing factor mitochondria associated 3","termid":"PBO:0039126"}


id: MONDO:0004371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clear cell meningioma arising in multiple areas of the spinal cord characterized by the presence of clear glycogen-rich polygonal cells.","definition_xrefs":["NCIT:C5287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell meningioma","termid":"MONDO:0002918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal multifocal clear cell meningioma","secondary_identifiers":["MEDGEN:277661","UMLS:C1336051","DOID:7824"],"synonyms":[{"name":"multifocal clear cell meningioma of spine","type":"exact"},{"name":"multifocal clear cell meningioma of the spine","type":"related"},{"name":"spinal multifocal clear cell meningioma","type":"exact"}],"termid":"MONDO:0004371","xrefs":{"Monarch":{"xref_id":"0004371"}}}


id: MONDO:0015077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal/paraganglial tumor (obsolete MONDO:0015077)","termid":"MONDO:0015077","xrefs":{"Monarch":{"xref_id":"0015077"}}}


id: PBO:0050104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 14","termid":"PBO:0050104"}


id: PBO:0049278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 1","termid":"PBO:0049278"}


id: GO:0043572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of two or more plastids by division of one plastid. A plastid is any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastid fission","termid":"GO:0043572"}


id: FYPO:0002804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole organization is abnormal when the cell is subject to nitrogen starvation. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["PomBase:mah","GO:0007033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization","termid":"FYPO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole organization during nitrogen starvation","synonyms":[{"name":"abnormal vacuolar organisation during nitrogen starvation","type":"exact"},{"name":"abnormal vacuolar organization during nitrogen starvation","type":"exact"},{"name":"abnormal vacuole organisation during nitrogen starvation","type":"exact"},{"name":"abnormal vacuole organization during nitrogen depletion","type":"exact"},{"name":"abnormal vacuole organization during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002804"}


id: PBO:0090585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAHis guanylyltransferase Thg1","termid":"PBO:0090585"}


id: GO:0010316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric complex that catalyzes the pyrophosphate-dependent phosphorylation of D-fructose 6-phosphate into D-fructose 1,6-bisphosphate.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex","synonyms":[{"name":"PFK complex","type":"related"}],"termid":"GO:0010316"}


id: SO:0001194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a GNA sequence in the (R)-GNA enantiomer.","definition_xrefs":["CHEBI:48016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GNA","termid":"SO:0001192"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_GNA","synonyms":[{"name":"R GNA","type":"exact"}],"termid":"SO:0001194"}


id: MONDO:0022815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital absence of the sternocleidomastoid muscle","secondary_identifiers":["UMLS:C2931075","MEDGEN:419327","MESH:C535977"],"termid":"MONDO:0022815","xrefs":{"Monarch":{"xref_id":"0022815"}}}


id: MONDO:0018060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital deficiencies of fibrinogen are coagulation disorders characterized by bleeding symptoms ranging from mild to severe resulting from reduced quantity and/or quality of circulating fibrinogen. Afibrinogenemia (complete absence of fibrinogen) and hypofibrinogenemia (reduced plasma fibrinogen concentration) correspond to quantitative anomalies of fibrinogen while dysfibrinogenemia corresponds to a functional anomaly of fibrinogen. Hypo- and dysfibrinogenemia may be frequently combined (hypodysfibrinogenemia).","definition_xrefs":["Orphanet:335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital fibrinogen deficiency","secondary_identifiers":["MEDGEN:412157","GARD:2320","icd11.foundation:1452989457","UMLS:C2062367"],"synonyms":[{"name":"congenital fibrinogen deficiency","type":"exact"},{"name":"fibrinogen deficiency, congenital","type":"related"}],"termid":"MONDO:0018060","xrefs":{"Monarch":{"xref_id":"0018060"}}}


id: GO:1901375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an acetate ester from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"acetate ester transmembrane transporter activity","termid":"GO:1901375"}


id: SO:0001232
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which thymine is bound to the ribose ring.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribothymidine","termid":"SO:0001232"}


id: PBO:0052135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 2","termid":"PBO:0052135"}


id: GO:0035009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the rate or extent of the melanization defense response. This regulation is critical to limit melanization to the site of injury or infection.","definition_xrefs":["GOC:bf","PMID:12408809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of melanization defense response","termid":"GO:0035007"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"negatively_regulates","term_name":"melanization defense response","termid":"GO:0035006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of melanization defense response","synonyms":[{"name":"down regulation of melanization defense response","type":"exact"},{"name":"down-regulation of melanization defense response","type":"exact"},{"name":"downregulation of melanization defense response","type":"exact"},{"name":"inhibition of melanization defense response","type":"narrow"},{"name":"negative regulation of melanization defence response","type":"exact"}],"termid":"GO:0035009"}


id: PBO:0035961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0035961"}


id: PBO:0075651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 7 pseudogene 1","termid":"PBO:0075651"}


id: GO:1900438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"narrow"}],"termid":"GO:1900438"}


id: PR:O94655
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ras-related protein Rab-7a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24073:SF260","PRO:DNx","OMA:SCHPO03584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.04c","secondary_identifiers":["UniProtKB:O94655"],"synonyms":[{"name":"Spom972h-RAB7A","type":"exact"}],"termid":"PR:O94655"}


id: PBO:0030399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_export_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030399"}


id: MONDO:0011120
data:
  {"annotated_genes":["SJAG_03712","SJAG_04425","SJAG_00106","SJAG_04459","SJAG_04042","SJAG_04156","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89121,89122,89123,89124,89125,89126,89127],"is_not":false,"summary":null,"term":"MONDO:0011120"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated spina bifida","termid":"MONDO:0019351"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01466":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04156":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"neural tube defects, folate-sensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:601634","MEDGEN:355746","MESH:C536409","UMLS:C1866558"],"synonyms":[{"name":"NTD, folate-sensitive","type":"related"},{"name":"NTDFS","type":"related"},{"name":"neural tube defects, folate-sensitive","type":"exact"},{"name":"neural tube defects, folate-sensitive, susceptibility to","type":"related"},{"name":"neural tube defects, susceptibility to","type":"related"},{"name":"spina bifida, folate-sensitive","type":"related"}],"termid":"MONDO:0011120","terms_by_termid":{"MONDO:0011120":null},"xrefs":{"Monarch":{"xref_id":"0011120"}}}


id: PBO:0045751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein Barr virus integration site 1","termid":"PBO:0045751"}


id: PBO:0074518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A10","termid":"PBO:0074518"}


id: PBO:0041852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 2","termid":"PBO:0041852"}


id: PR:O74818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carboxypeptidase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized carboxypeptidase C337.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.07c","secondary_identifiers":["UniProtKB:O74818"],"synonyms":[{"name":"Spom972h-CPB1","type":"exact"}],"termid":"PR:O74818"}


id: MONDO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An alteration in limb growth caused by congenital vascular malformations in childhood.","definition_xrefs":["PMID:8305978"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital vascular bone syndrome (obsolete MONDO:0016524)","secondary_identifiers":["Orphanet:235832","icd11.foundation:825559961"],"termid":"MONDO:0016524","xrefs":{"Monarch":{"xref_id":"0016524"}}}


id: GO:0097144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAX, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAX complex","termid":"GO:0097144"}


id: PBO:0069213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 468, pseudogene","termid":"PBO:0069213"}


id: MONDO:0700084
data:
  {"annotated_genes":["SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[87680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"}]},"cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the GMPPB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"myopathy caused by variation in GMPPB","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"GMPPB-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in GMPPB","type":"exact"}],"termid":"MONDO:0700084","terms_by_termid":{"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0700084"}}}


id: GO:0004114
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004115"},{"annotations":[80742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside 3',5'-cyclic phosphate + H2O = a nucleoside 5'-phosphate.","definition_xrefs":["PMID:35216259","RHEA:14653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"3',5'-cyclic-nucleotide phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-162425","EC:3.1.4.17","MetaCyc:3.1.4.17-RXN"],"synonyms":[{"name":"3', 5'-cyclic nucleoside monophosphate phosphodiesterase activity","type":"related"},{"name":"3',5' cyclic-nucleotide phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-nucleotide 5'-nucleotidohydrolase activity","type":"related"},{"name":"3',5'-cyclonucleotide phosphodiesterase activity","type":"related"},{"name":"3',5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"3': 5'-monophosphate phosphodiesterase (cyclic CMP) activity","type":"related"},{"name":"3':5'-cyclic nucleotide 5'-nucleotidohydrolase activity","type":"related"},{"name":"PDE","type":"related"},{"name":"cyclic 3',5'-mononucleotide phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5'-phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5-nucleotide monophosphate phosphodiesterase activity","type":"related"},{"name":"cyclic AMP phosphodiesterase activity","type":"narrow"},{"name":"cyclic nucleotide phosphodiesterase activity","type":"related"},{"name":"cytidine 3':5'-monophosphate phosphodiesterase (cyclic CMP) activity","type":"related"},{"name":"nucleoside 3',5'-cyclic phosphate diesterase activity","type":"related"},{"name":"nucleoside-3',5-monophosphate phosphodiesterase activity","type":"related"}],"termid":"GO:0004114","terms_by_termid":{"GO:0004115":null,"GO:0047555":null}}


id: GO:0042995
data:
  {"annotated_genes":["SJAG_01978","SJAG_02924","SJAG_03444","SJAG_01943","SJAG_02228","SJAG_00845","SJAG_02718","SJAG_03145","SJAG_04703","SJAG_00185","SJAG_04723","SJAG_03453","SJAG_00514","SJAG_04982","SJAG_00870","SJAG_02700","SJAG_00663","SJAG_01993","SJAG_04621","SJAG_00279","SJAG_04100","SJAG_02169","SJAG_05285","SJAG_04781","SJAG_01171","SJAG_05001","SJAG_04001","SJAG_01017","SJAG_03011","SJAG_03646","SJAG_02486","SJAG_03688","SJAG_03596","SJAG_02379","SJAG_04887","SJAG_02989","SJAG_04470","SJAG_00700","SJAG_03357","SJAG_01888","SJAG_04901","SJAG_01215","SJAG_02222","SJAG_00938","SJAG_04509","SJAG_02351","SJAG_01769","SJAG_00667","SJAG_01794","SJAG_00677","SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59447,78944],"is_not":false,"summary":null,"term":"GO:0042995"},{"annotations":[113194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005937"},{"annotations":[113145,95790,90042,103737,109942,97147,118012,109881,92609,101936,95596,90863,94282,103736,116460,121097,101334],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[100761,89903],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070250"},{"annotations":[101899,117806,96275,107815],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[77252,108970,117653,116160,80404,99502,92439,71823,99696,110875,79476,78001,98644,75634,94355,108669,73864,89652,100677,105047,110665,92485,107909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043332"},{"annotations":[112017,98154],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"},{"annotations":[81271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005902"}]},"cv_name":"cellular_component","definition":"A prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl","PMID:16318917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00279":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00845":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_03688":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell projection","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"cell process","type":"broad"},{"name":"cellular process","type":"broad"},{"name":"cellular projection","type":"exact"}],"termid":"GO:0042995","terms_by_termid":{"GO:0005902":null,"GO:0005937":null,"GO:0032175":null,"GO:0042995":null,"GO:0043332":null,"GO:0070250":null,"GO:0070867":null,"GO:1990819":null}}


id: GO:0009234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the menaquinones. Structurally, menaquinones consist of a methylated naphthoquinone ring structure and side chains composed of a variable number of unsaturated isoprenoid residues. Menaquinones that have vitamin K activity and are known as vitamin K2.","definition_xrefs":["GOC:jl","PMID:6127606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menaquinone metabolic process","termid":"GO:0009233"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"menaquinone biosynthetic process","secondary_identifiers":["MetaCyc:MENAQUINONESYN-PWY"],"synonyms":[{"name":"menaquinone anabolism","type":"exact"},{"name":"menaquinone biosynthesis","type":"exact"},{"name":"menaquinone formation","type":"exact"},{"name":"menaquinone synthesis","type":"exact"},{"name":"menatetrenone biosynthesis","type":"exact"},{"name":"menatetrenone biosynthetic process","type":"exact"},{"name":"multiprenylmenaquinone biosynthesis","type":"exact"},{"name":"multiprenylmenaquinone biosynthetic process","type":"exact"},{"name":"vitamin K2 biosynthesis","type":"exact"},{"name":"vitamin K2 biosynthetic process","type":"exact"}],"termid":"GO:0009234"}


id: PBO:0031135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_osmotic_stress","termid":"PBO:0031135"}


id: GO:1904930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane that is part of an amphisome.","definition_xrefs":["GOC:TermGenie","PMID:17984323","GO_REF:0000064","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagosome membrane","termid":"GO:0000421"},{"relation_name":"part_of","term_name":"amphisome","termid":"GO:0044753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"amphisome membrane","termid":"GO:1904930"}


id: PBO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase","termid":"PBO:0090603"}


id: PBO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L27 (predicted)","termid":"PBO:0000971"}


id: PBO:0053694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 892","termid":"PBO:0053694"}


id: MONDO:0006593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by a diffuse poorly circumscribed overgrowth of adipose tissue in the pelvic region. Clinical presentation includes complaints of back and abdominal pain, urinary frequency, perineal pain and constipation. It predominately affects black males.","definition_xrefs":["NCIT:C27486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic lipomatosis","secondary_identifiers":["MESH:C535549","DOID:3927","EFO:1000748","UMLS:C0406608","MEDGEN:96064"],"synonyms":[{"name":"Excess of mature unencapsulated fatty tissue in the pelvis","type":"related"},{"name":"pelvic lipomatosis","type":"exact"},{"name":"pelvic lipomatosis (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006593","xrefs":{"Monarch":{"xref_id":"0006593"}}}


id: PBO:0055187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2611","termid":"PBO:0055187"}


id: GO:0042648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circular DNA molecule containing chloroplast encoded genes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid chromosome","termid":"GO:0009508"},{"relation_name":"part_of","term_name":"chloroplast nucleoid","termid":"GO:0042644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005694"],"is_obsolete":false,"name":"chloroplast chromosome","termid":"GO:0042648"}


id: PBO:0043195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2 pseudogene 1","termid":"PBO:0043195"}


id: GO:0010131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose by the enzymatic action of either invertase or sucrose synthase.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using invertase or sucrose synthase (obsolete GO:0010131)","synonyms":[{"name":"sucrose breakdown, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolic process, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolism, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose degradation, using invertase or sucrose synthase","type":"exact"}],"termid":"GO:0010131"}


id: PBO:0039798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity regulated cytoskeleton associated protein","termid":"PBO:0039798"}


id: PBO:0039241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member A2","termid":"PBO:0039241"}


id: GO:0003157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the endocardium over time, from its formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardium development","termid":"GO:0003157"}


id: MONDO:0015854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supernumerary breasts","secondary_identifiers":["icd11.foundation:1458532658","GARD:20195","Orphanet:180182","UMLS:C0266010","MedDRA:10049786","MEDGEN:78583"],"synonyms":[{"name":"accessory breasts","type":"exact"},{"name":"polymastia","type":"exact"}],"termid":"MONDO:0015854","xrefs":{"Monarch":{"xref_id":"0015854"}}}


id: MONDO:1010552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent urachus that occurs in mountain zebra.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent urachus, non-human animal","termid":"MONDO:1010046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent urachus, mountain zebra","secondary_identifiers":["OMIA:000781-9791"],"termid":"MONDO:1010552","xrefs":{"Monarch":{"xref_id":"1010552"}}}


id: FYPO:0003620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal pre-mRNA level","synonyms":[{"name":"normal pre-mRNA accumulation","type":"related"},{"name":"normal pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"normal pre-mRNA level during vegetative growth","type":"exact"},{"name":"normal pre-mRNA transcript level","type":"exact"}],"termid":"FYPO:0003620"}


id: GO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process that negatively regulates protein kinase activity.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein kinase activity by protein phosphorylation (obsolete GO:0100002)","termid":"GO:0100002"}


id: MONDO:0004725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestine carcinoma in situ","termid":"MONDO:0004698"},{"relation_name":"is_a","term_name":"rectal carcinoma","termid":"MONDO:0044937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectum carcinoma in situ","secondary_identifiers":["ICD10CM:D01.2","DOID:9174","MEDGEN:56335","NCIT:C4853","SCTID:308879003","UMLS:C0154062","ICD9:230.4"],"synonyms":[{"name":"carcinoma in situ of rectum","type":"exact"},{"name":"carcinoma in situ of the rectum","type":"exact"},{"name":"marked dysplasia of rectum","type":"exact"},{"name":"marked dysplasia of the rectum","type":"exact"},{"name":"marked rectal dysplasia","type":"exact"},{"name":"rectal carcinoma in situ","type":"exact"},{"name":"rectum in situ carcinoma","type":"exact"},{"name":"severe dysplasia of rectum","type":"exact"},{"name":"severe dysplasia of the rectum","type":"exact"},{"name":"severe rectal dysplasia","type":"exact"},{"name":"stage 0 carcinoma of rectum","type":"exact"},{"name":"stage 0 carcinoma of the rectum","type":"exact"},{"name":"stage 0 rectal cancer","type":"exact"},{"name":"stage 0 rectal cancer aJCC v6","type":"exact"},{"name":"stage 0 rectal cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 rectal cancer aJCC v7","type":"exact"},{"name":"stage 0 rectal carcinoma","type":"exact"},{"name":"stage 0 rectum carcinoma","type":"exact"}],"termid":"MONDO:0004725","xrefs":{"Monarch":{"xref_id":"0004725"}}}


id: PBO:0061209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"noggin","termid":"PBO:0061209"}


id: PBO:0036014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0036014"}


id: PBO:0060435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 2","termid":"PBO:0060435"}


id: GO:0034774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a secretory granule.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"secretory granule lumen","termid":"GO:0034774"}


id: PBO:0075479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 7","termid":"PBO:0075479"}


id: MONDO:0700234
data:
  {"annotated_genes":["SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010806"}]},"cv_name":"mondo","definition":"Any retinopathy caused by a variant in the PRPF8 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PRPF8-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PRPF8-related retinopathy","type":"exact"}],"termid":"MONDO:0700234","terms_by_termid":{"MONDO:0010806":null},"xrefs":{"Monarch":{"xref_id":"0700234"}}}


id: MONDO:1012336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reduced glutathione deficiency due to amino-acid transport defect, non-human animal","termid":"MONDO:1011698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reduced glutathione deficiency due to amino-acid transport defect, sheep","secondary_identifiers":["OMIA:001234-9940"],"termid":"MONDO:1012336","xrefs":{"Monarch":{"xref_id":"1012336"}}}


id: PBO:0001734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14 (predicted)","termid":"PBO:0001734"}


id: MONDO:0012142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any orofacial cleft in which the cause of the disease is a mutation in the MSX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft lip and alveolus","termid":"MONDO:0015420"},{"relation_name":"is_a","term_name":"isolated cleft lip","termid":"MONDO:0016043"},{"relation_name":"is_a","term_name":"cleft lip/palate","termid":"MONDO:0016044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 5","secondary_identifiers":["MEDGEN:373280","MESH:C563843","UMLS:C1837210","OMIM:608874","DOID:0080399","GARD:18305"],"synonyms":[{"name":"MSX1 orofacial cleft","type":"exact"},{"name":"OFC5","type":"related"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 5","type":"related"},{"name":"orofacial cleft 5","type":"exact"},{"name":"orofacial cleft caused by mutation in MSX1","type":"exact"},{"name":"orofacial cleft type 5","type":"exact"}],"termid":"MONDO:0012142","xrefs":{"Monarch":{"xref_id":"0012142"}}}


id: GO:1901363
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compound binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:1901363","terms_by_termid":{"GO:0002055":null,"GO:0002134":null,"GO:0002135":null,"GO:0005524":null,"GO:0005525":null,"GO:0010181":null,"GO:0016208":null,"GO:0019002":null,"GO:0019003":null,"GO:0030170":null,"GO:0030552":null,"GO:0030975":null,"GO:0030976":null,"GO:0032549":null,"GO:0036042":null,"GO:0043531":null,"GO:0050660":null,"GO:0050661":null,"GO:0051287":null,"GO:0070401":null,"GO:0070402":null,"GO:0070403":null,"GO:0071949":null,"GO:1902444":null,"GO:1905108":null}}


id: PBO:0077001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 3","termid":"PBO:0077001"}


id: PBO:0065916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGEF1 pseudogene 2","termid":"PBO:0065916"}


id: PR:O13728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ain1 gene.","definition_xrefs":["UniProtKB:O13728","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-actinin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.08","synonyms":[{"name":"Spom972h-ain1","type":"exact"}],"termid":"PR:O13728"}


id: GO:0033812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + acetyl-CoA = CoA + 3-oxoadipyl-CoA.","definition_xrefs":["RHEA:19481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA C-acyltransferase activity","termid":"GO:0003988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"3-oxoadipyl-CoA thiolase activity","secondary_identifiers":["MetaCyc:RXN-3641","EC:2.3.1.174"],"synonyms":[{"name":"succinyl-CoA:acetyl-CoA C-succinyltransferase activity","type":"related"}],"termid":"GO:0033812"}


id: MONDO:0008496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"storm syndrome","secondary_identifiers":["OMIM:185069","MEDGEN:350029","MESH:C566109","UMLS:C1861452"],"synonyms":[{"name":"pleiotropic, autosomal dominant disorder affecting connective tissue","type":"related"},{"name":"storm syndrome","type":"exact"}],"termid":"MONDO:0008496","xrefs":{"Monarch":{"xref_id":"0008496"}}}


id: PBO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 2","termid":"PBO:0044228"}


id: _global:existence_starts_during_or_after
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y).","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_physical_entity_and_a_process_or_stage","termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_during_or_after","secondary_identifiers":["RO:0002496"],"termid":"_global:existence_starts_during_or_after"}


id: GO:0062155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that serves as a channel for the secretion of curli. Curli are a fibers that serve as a major component of the extracellular matrix of pellicle biofilms.","definition_xrefs":["PMID:25219853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"curli secretion complex","termid":"GO:0062155"}


id: GO:0062237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the postsynapse, the part of a synapse that is part of the post-synaptic cell.","definition_xrefs":["PMID:31189538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to postsynapse","termid":"GO:0062237"}


id: FYPO:0003787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, and extend beyond the spindle pole body. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PMID:17486116","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"},{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"},{"relation_name":"is_a","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0002403","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000120"],"is_obsolete":false,"name":"long mitotic spindle microtubules protruding beyond spindle pole body","synonyms":[{"name":"elongated mitotic spindle microtubules protruding from spindle pole body","type":"exact"},{"name":"elongated mitotic spindle microtubules protruding from spindle pole body during M-phase","type":"exact"},{"name":"long mitotic spindle microtubules protruding beyond spindle pole body, with nuclear envelope deformation","type":"related"},{"name":"long mitotic spindle microtubules protruding beyond spindle pole body, with nuclear envelope protrusion","type":"exact"},{"name":"long mitotic spindle microtubules protruding from SPB","type":"exact"},{"name":"long mitotic spindle microtubules protruding from spindle pole body during mitotic cell cycle","type":"related"},{"name":"long mitotic spindle microtubules protruding from spindle pole body during vegetative growth","type":"exact"},{"name":"long nuclear microtubules protruding through nuclear envelope","type":"related"},{"name":"mitotic spindle microtubules protruding beyond spindle pole body","type":"broad"},{"name":"nuclear envelope protrusion with long mitotic spindle microtubules protruding beyond spindle pole body","type":"exact"}],"termid":"FYPO:0003787"}


id: PBO:0038791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 1 pseudogene 2","termid":"PBO:0038791"}


id: GO:0106316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH4+ + 3 NAD+ + 2 H2O = nitrite + 3 NADH + 5 H+.","definition_xrefs":["RHEA:24628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrite reductase [NAD(P)H] activity","termid":"GO:0008942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrite reductase (NADH) activity","secondary_identifiers":["EC:1.7.1.15"],"termid":"GO:0106316"}


id: FYPO:0006389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic spindle pole body (SPB) moves rapidly back and forth within the nuclear envelope to a normal (i.e. indistinguishable from wild type) extent during prophase of the first meiotic nuclear division.","definition_xrefs":["PMID:17632059","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic spindle pole body oscillation during prophase I","synonyms":[{"name":"normal meiotic SPB oscillation during prophase I","type":"exact"},{"name":"normal meiotic spindle pole body movement during prophase I","type":"exact"},{"name":"normal spindle pole body oscillation during prophase I","type":"exact"}],"termid":"FYPO:0006389"}


id: MONDO:0015150
data:
  {"annotated_genes":["SJAG_04292","SJAG_00308","SJAG_03457","SJAG_04145","SJAG_00773","SJAG_02306","SJAG_04537","SJAG_01854","SJAG_00660","SJAG_04123","SJAG_01537","SJAG_00199","SJAG_04506","SJAG_04757","SJAG_03320","SJAG_04110","SJAG_03866"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86736,86737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[88753,88754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014975"},{"annotations":[89026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030669"},{"annotations":[87171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014567"},{"annotations":[87386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009748"},{"annotations":[86911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[88052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012787"},{"annotations":[87019,87020,87021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014018"},{"annotations":[87018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014020"},{"annotations":[87378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014305"},{"annotations":[86848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014644"},{"annotations":[88232,88231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[86832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014679"},{"annotations":[88491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012651"},{"annotations":[87782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030482"},{"annotations":[87827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030512"}]},"cv_name":"mondo","definition":"A hereditary spastic paraplegia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00308":null,"SJAG_00660":null,"SJAG_00773":null,"SJAG_01537":null,"SJAG_01854":null,"SJAG_02306":null,"SJAG_03320":null,"SJAG_03457":null,"SJAG_03866":null,"SJAG_04110":null,"SJAG_04123":null,"SJAG_04145":null,"SJAG_04292":null,"SJAG_04506":null,"SJAG_04537":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"complex hereditary spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19823","MEDGEN:581446","NANDO:1200054","UMLS:C0393556","Orphanet:102013","SCTID:230261006"],"synonyms":[{"name":"Complex HSP","type":"exact"},{"name":"Complex SPG","type":"exact"},{"name":"Complex familial spastic paraplegia","type":"exact"},{"name":"complicated HSP","type":"exact"},{"name":"complicated SPG","type":"exact"},{"name":"complicated familial spastic paraplegia","type":"exact"},{"name":"complicated hereditary spastic paraplegia","type":"exact"},{"name":"syndrome associated with hereditary spastic paraplegia","type":"exact"},{"name":"syndromic hereditary spastic paraplegia","type":"exact"}],"termid":"MONDO:0015150","terms_by_termid":{"MONDO:0009748":null,"MONDO:0010043":null,"MONDO:0011006":null,"MONDO:0012651":null,"MONDO:0012787":null,"MONDO:0014018":null,"MONDO:0014020":null,"MONDO:0014305":null,"MONDO:0014567":null,"MONDO:0014644":null,"MONDO:0014679":null,"MONDO:0014702":null,"MONDO:0014975":null,"MONDO:0030482":null,"MONDO:0030512":null,"MONDO:0030669":null},"xrefs":{"Monarch":{"xref_id":"0015150"}}}


id: GO:0140644
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extracellular microbicidal structure composed of nuclear chromatin, histones and granular antimicrobial proteins. Histones and several neutrophil granule proteins associated with the DNA framework damage entrapped microorganisms.","definition_xrefs":["PMID:31172493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular membraneless organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"neutrophil extracellular trap","synonyms":[{"name":"NET","type":"broad"}],"termid":"GO:0140644"}


id: PBO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cruciform cutting endonuclease Cce1","termid":"PBO:0002455"}


id: GO:0043752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RTP + adenosylcobinamide = adenosylcobinamide phosphate + RDP (where RTP is either ATP or GTP).","definition_xrefs":["EC:2.7.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"adenosylcobinamide kinase activity","secondary_identifiers":["MetaCyc:2.7.1.156-RXN"],"synonyms":[{"name":"AdoCbi kinase/AdoCbi-phosphate guanylyltransferase","type":"broad"},{"name":"CobU","type":"related"},{"name":"RTP:adenosylcobinamide phosphotransferase activity","type":"exact"},{"name":"adenosylcobinamide kinase (ATP-specific) activity","type":"narrow"},{"name":"adenosylcobinamide kinase (GTP-specific) activity","type":"narrow"},{"name":"adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase","type":"broad"},{"name":"cobinamide kinase activity","type":"exact"}],"termid":"GO:0043752"}


id: GO:0005154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an epidermal growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"epidermal growth factor receptor binding","secondary_identifiers":["GO:0008185"],"synonyms":[{"name":"EGF","type":"narrow"},{"name":"EGF receptor binding","type":"exact"},{"name":"EGF receptor ligand","type":"narrow"},{"name":"EGFR binding","type":"exact"},{"name":"TGF-alpha receptor binding","type":"exact"},{"name":"TGFalpha receptor binding","type":"exact"},{"name":"epidermal growth factor","type":"narrow"},{"name":"epidermal growth factor receptor ligand","type":"narrow"},{"name":"transforming growth factor alpha","type":"narrow"},{"name":"transforming growth factor alpha receptor binding","type":"exact"},{"name":"transforming growth factor alpha receptor ligand","type":"narrow"}],"termid":"GO:0005154"}


id: PBO:0086863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine hydrolase; likely target of Cyc8p-Tup1p-Rfx1p transcriptional regulation; sequence is similar to S. cerevisiae Fsh1p and Fsh2p and the human candidate tumor suppressor OVCA2","termid":"PBO:0086863"}


id: PBO:0058661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6789","termid":"PBO:0058661"}


id: GO:0033801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + vitexin 2''-O-beta-L-rhamnoside = S-adenosyl-L-homocysteine + 7-O-methylvitexin 2''-O-beta-L-rhamnoside.","definition_xrefs":["EC:2.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"vitexin 2''-O-rhamnoside 7-O-methyltransferase activity","secondary_identifiers":["RHEA:11432","MetaCyc:RXN-4981"],"synonyms":[{"name":"S-adenosyl-L-methionine:vitexin-2''-O-beta-L-rhamnoside 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033801"}


id: PR:Q9Y7X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA/RNA-binding protein KIN17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12805:SF0","OMA:SCHPO03308","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIN17-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.09c","secondary_identifiers":["UniProtKB:Q9Y7X9"],"synonyms":[{"name":"Spom972h-KIN","type":"exact"}],"termid":"PR:Q9Y7X9"}


id: MONDO:0010402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic X-linked intellectual disability characterized by moderate intellectual disability with variable occurrence of asthenic body habitus, dysmorphic features, autistic features, macrocephaly, seizures, myoclonic jerks, and hyporeflexia that has material basis in mutation in the GRIA3 gene on chromosome Xq25.","definition_xrefs":["DOID:0060823","PMID:17989220","PMID:24721225","PMID:19449417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability 94","secondary_identifiers":["MESH:C567479","MEDGEN:437111","UMLS:C2678051","OMIM:300699"],"synonyms":[{"name":"MRX94","type":"exact"},{"name":"MRXS29","type":"exact"},{"name":"MRXSW","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, Wu type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 94","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 29","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Wu type","type":"related"},{"name":"mental retardation, X-linked 94","type":"exact"},{"name":"mental retardation, X-linked, syndromic 29","type":"related"},{"name":"mental retardation, X-linked, syndromic, Wu type","type":"related"},{"name":"syndromic X-linked intellectual disability 29","type":"exact"},{"name":"syndromic X-linked intellectual disability 94","type":"exact"},{"name":"syndromic X-linked intellectual disability Wu type","type":"exact"},{"name":"syndromic X-linked intellectual disability due to GRIA3 anomalies","type":"exact"},{"name":"syndromic X-linked intellectual disability type 94","type":"exact"},{"name":"syndromic X-linked mental retardation 29","type":"exact"},{"name":"syndromic X-linked mental retardation Wu type","type":"exact"}],"termid":"MONDO:0010402","xrefs":{"Monarch":{"xref_id":"0010402"}}}


id: PBO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6 pseudogene 1","termid":"PBO:0075234"}


id: GO:0033507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates from other compounds including phenylalanine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-2821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"glucosinolate biosynthetic process from phenylalanine","synonyms":[{"name":"glucosinolate anabolism from phenylalanine","type":"exact"},{"name":"glucosinolate biosynthesis from phenylalanine","type":"exact"},{"name":"glucosinolate formation from phenylalanine","type":"exact"},{"name":"glucosinolate synthesis from phenylalanine","type":"exact"}],"termid":"GO:0033507"}


id: PBO:0051715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin induced gene 2","termid":"PBO:0051715"}


id: GO:0018877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.","definition_xrefs":["UM-BBD_pathwayID:hch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexachlorocyclohexane metabolic process","termid":"GO:0019497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","synonyms":[{"name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0018877"}


id: PBO:0069611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 888, pseudogene","termid":"PBO:0069611"}


id: GO:0031820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y11 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"P2Y11 nucleotide receptor binding","synonyms":[{"name":"P2Y11 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031820"}


id: MONDO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation-related bone disorder (obsolete MONDO:0018292)","secondary_identifiers":["Orphanet:371195"],"synonyms":[{"name":"CDG-related bone disorder","type":"exact"}],"termid":"MONDO:0018292","xrefs":{"Monarch":{"xref_id":"0018292"}}}


id: MONDO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited Fanconi renotubular syndrome","termid":"MONDO:0100238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Fanconi renotubular syndrome 5","secondary_identifiers":["UMLS:C5394473","GARD:16392","MEDGEN:1711127","DOID:0080761","OMIM:618913"],"synonyms":[{"name":"FANCONI RENOTUBULAR SYNDROME 5","type":"exact"},{"name":"FRTS5","type":"exact"},{"name":"Fanconi Renotubular Syndrome, Acadian Variant","type":"exact"},{"name":"Fanconi renotubular syndrome 5","type":"exact"}],"termid":"MONDO:0030056","xrefs":{"Monarch":{"xref_id":"0030056"}}}


id: GO:0016076
data:
  {"annotated_genes":["SJAG_03745","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72299,71954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of snRNA, small nuclear RNA, low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"snRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"snRNA breakdown","type":"exact"},{"name":"snRNA catabolism","type":"exact"},{"name":"snRNA degradation","type":"exact"}],"termid":"GO:0016076","terms_by_termid":{"GO:0071037":null}}


id: PBO:0070482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 17","termid":"PBO:0070482"}


id: GO:0004985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an opioid (any narcotic derived from or resembling opium), and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:ai","PMID:20494127","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled opioid receptor activity","synonyms":[{"name":"opioid receptor activity","type":"broad"}],"termid":"GO:0004985"}


id: GO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber formation","synonyms":[{"name":"heart chamber formation","type":"exact"}],"termid":"GO:0003207"}


id: MONDO:0001481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thrombophlebitis that involves the femoral vein.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombophlebitis","termid":"MONDO:0002800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"femoral vein thrombophlebitis","secondary_identifiers":["SCTID:1748006","UMLS:C0265066","DOID:12282","ICD10CM:I80.1","ICD9:451.11","MEDGEN:539052"],"synonyms":[{"name":"femoral vein thrombophlebitis","type":"exact"},{"name":"phlebitis and thrombophlebitis of femoral vein","type":"exact"},{"name":"phlebitis and thrombophlebitis of femoral vein (deep) (superficial)","type":"exact"},{"name":"thrombophlebitis of deep femoral vein","type":"exact"},{"name":"thrombophlebitis of femoral vein","type":"exact"},{"name":"thrombophlebitis of the femoral vein","type":"exact"}],"termid":"MONDO:0001481","xrefs":{"Monarch":{"xref_id":"0001481"}}}


id: PBO:0057162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320a","termid":"PBO:0057162"}


id: PBO:0084943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multidrug transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; has a role in polyamine homeostasis; involved in spore wall asembly; sequence similarity to DTR1 and QDR1, and the triple mutant dtr1 qdr1 qdr3 exhibits reduced dityrosine fluorescence relative to the single mutants; expression is upregulated under polyamine stress; required for resistance to quinidine, barban, cisplatin, and bleomycin","termid":"PBO:0084943"}


id: PBO:0051800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 2","termid":"PBO:0051800"}


id: GO:0043061
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89635,95605],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during meiosis II chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["PMID:10809666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"meiotic metaphase II chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043061","terms_by_termid":{"GO:0051456":null}}


id: MONDO:0032661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with impaired intellectual development, hypotonia, and ataxia","secondary_identifiers":["GARD:18515","MEDGEN:1648291","OMIM:618292","UMLS:C4749014"],"synonyms":[{"name":"NEDIDHA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH IMPAIRED INTELLECTUAL DEVELOPMENT, HYPOTONIA, AND ATAXIA","type":"related"}],"termid":"MONDO:0032661","xrefs":{"Monarch":{"xref_id":"0032661"}}}


id: GO:0010909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis. Heparan sulfate proteoglycan biosynthetic processes are the chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, which consists of a core protein linked to a heparan sulfate glycosaminoglycan. The heparan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heparan sulfate proteoglycan biosynthetic process","termid":"GO:0010908"},{"relation_name":"is_a","term_name":"positive regulation of proteoglycan biosynthetic process","termid":"GO:1902730"},{"relation_name":"is_a","term_name":"positive regulation of protein O-linked glycosylation","termid":"GO:1904100"},{"relation_name":"positively_regulates","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heparan sulfate proteoglycan biosynthetic process","termid":"GO:0010909"}


id: GO:0008529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an intracellular peptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete endogenous peptide receptor activity (obsolete GO:0008529)","synonyms":[{"name":"endogenous peptide receptor activity","type":"exact"}],"termid":"GO:0008529"}


id: PBO:0054730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2139","termid":"PBO:0054730"}


id: GO:0097218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the cell wall of a sieve tube member that bears one or more highly specialized sieve areas.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"sieve plate","termid":"GO:0097218"}


id: FYPO:0002722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular phytochelatin level","termid":"FYPO:0002829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"phytochelatin absent from cell","synonyms":[{"name":"cadystin absent from cell","type":"exact"},{"name":"phytochelatin absent from cell during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002722"}


id: MONDO:0016766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Lichen planus (LP) is a common inflammatory dermatosis characterized by the development of pruritic violaceous papules or plaques on mucocutaneous surfaces. Eruptions can involve the face, neck, limbs, back, genitalia, tongue, buccal mucosa, nails, and scalp. LP comprises rare variants affecting the skin and the mucosa. Rare cutaneous LP includes linear LP (referring to blaschkoid and zosteriform distributions of lichenoid lesions), actinic LP, annular LP, atrophic LP, annular atrophic LP, lichen planopilaris (comprising Graham Little-Piccardi-Lassueur syndrome and frontal fibrosing alopecia), lichen planus pigmentosus, and lichen planus pemphigoides. Rare mucosal LP includes vulvovaginal gingival syndrome and LP sialadenitis.","definition_xrefs":["Orphanet:254367"],"gene_count":0,"genotype_count":0,"name":"obsolete rare lichen planus (obsolete MONDO:0016766)","synonyms":[{"name":"rare LP","type":"exact"},{"name":"rare lichen planus","type":"exact"}],"termid":"MONDO:0016766","xrefs":{"Monarch":{"xref_id":"0016766"}}}


id: MONDO:0032588
data:
  {"annotated_genes":["SJAG_02824"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88013],"is_not":false,"summary":null,"term":"MONDO:0032588"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular nodular heterotopia 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648287","OMIM:618185","GARD:16303","UMLS:C4748602"],"synonyms":[{"name":"PERIVENTRICULAR NODULAR HETEROTOPIA 8","type":"related"},{"name":"PVNH8","type":"related"}],"termid":"MONDO:0032588","terms_by_termid":{"MONDO:0032588":null},"xrefs":{"Monarch":{"xref_id":"0032588"}}}


id: MONDO:0012933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary breast ovarian cancer syndrome in which the cause of the disease is a mutation in the BRCA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary breast ovarian cancer syndrome","termid":"MONDO:0003582"},{"relation_name":"is_a","term_name":"hereditary breast ovarian cancer syndrome","termid":"MONDO:0003582"},{"relation_name":"is_a","term_name":"breast-ovarian cancer, familial, susceptibility to","termid":"MONDO:0100526"},{"relation_name":"is_a","term_name":"BRCA2-related cancer predisposition","termid":"MONDO:0700269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"breast-ovarian cancer, familial, susceptibility to, 2","secondary_identifiers":["UMLS:C2675520","OMIM:612555","MEDGEN:382625"],"synonyms":[{"name":"BRCA2 hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"BROVCA2","type":"related"},{"name":"breast cancer, familial, susceptibility to, 2","type":"related"},{"name":"breast-ovarian cancer, familial, 2","type":"exact"},{"name":"breast-ovarian cancer, familial, susceptibility to, 2","type":"exact"},{"name":"breast-ovarian cancer, familial, susceptibility to, type 2","type":"exact"},{"name":"hereditary breast ovarian cancer syndrome caused by mutation in BRCA2","type":"exact"},{"name":"ovarian cancer, familial, susceptibility to, 2","type":"related"},{"name":"susceptibility to familial breast-ovarian cancer 2","type":"related"}],"termid":"MONDO:0012933","xrefs":{"Monarch":{"xref_id":"0012933"}}}


id: PATO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A notched shape quality inhering in a bearer by virtue of the bearer's having a notched tip or edge.","direct_ancestors":[{"relation_name":"is_a","term_name":"notched","termid":"PATO:0001495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emarginate","termid":"PATO:0002234"}


id: PBO:0056536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1 pseudogene 1","termid":"PBO:0056536"}


id: GO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the trochlear nerve is generated and organized. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"trochlear nerve development","termid":"GO:0021558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve morphogenesis","synonyms":[{"name":"CH IV morphogenesis","type":"related"}],"termid":"GO:0021639"}


id: PBO:0078910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 1-1","termid":"PBO:0078910"}


id: PBO:0072694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX3 antisense RNA 1","termid":"PBO:0072694"}


id: FYPO:0007425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion is normal (i.e. indistinguishably from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal gene conversion","synonyms":[{"name":"normal gene conversion during mitotic cell cycle","type":"related"},{"name":"normal gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0007425"}


id: GO:0030047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Covalent modification of an actin molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actin modification","secondary_identifiers":["GO:0007013"],"termid":"GO:0030047"}


id: GO:2000385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ectoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ectoderm development","termid":"GO:2000383"},{"relation_name":"positively_regulates","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ectoderm development","termid":"GO:2000385"}


id: PBO:0053333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 173","termid":"PBO:0053333"}


id: PBO:0017722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoadipate and 2-oxoglutarate transmembrane transporter (predicted)","termid":"PBO:0017722"}


id: MONDO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden increase of intraocular pressure, resulting in pain and an abrupt decrease in visual acuity.","definition_xrefs":["NCIT:C34639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"angle-closure glaucoma","secondary_identifiers":["DOID:13550","MEDGEN:6610","MESH:D015812","SCTID:392291006","UMLS:C0017605"],"synonyms":[{"name":"ACG - angle-closure glaucoma","type":"exact"},{"name":"Narrow cleft glaucoma","type":"exact"},{"name":"angle closure glaucoma","type":"exact"},{"name":"primary open-angle glaucoma with narrow angles","type":"exact"}],"termid":"MONDO:0001744","xrefs":{"Monarch":{"xref_id":"0001744"}}}


id: PBO:0063331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 7","termid":"PBO:0063331"}


id: GO:0097373
data:
  {"annotated_genes":["SJAG_00857","SJAG_04210","SJAG_00884"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57192,58565,67270],"is_not":false,"summary":null,"term":"GO:0097373"}]},"cv_name":"cellular_component","definition":"A protein complex that contains Mcm4, Mcm6, and Mcm7 proteins, and possesses DNA helicase activity. In the heterohexameric MCM complex, the Mcm4/6/7 proteins form a stable core, and Mcm2, Mcm3, and Mcm5 are more peripherally associated.","definition_xrefs":["PMID:10770926","PMID:9305914","GOC:mah","PMID:15007098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MCM core complex","references_by_uniquename":{"GO_REF:0000117":null},"synonyms":[{"name":"MCM4/6/7 complex","type":"exact"}],"termid":"GO:0097373","terms_by_termid":{"GO:0097373":null}}


id: PBO:0119271
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP2","termid":"PBO:0119271"}


id: PBO:0043189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4","termid":"PBO:0043189"}


id: PBO:0028655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_snRNA_3'-end_processing","termid":"PBO:0028655"}


id: GO:0099021
data:
  {"annotated_genes":["SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94862],"is_not":false,"summary":null,"term":"GO:0099021"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the cortical endoplasmic reticulum.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"cortical endoplasmic reticulum","termid":"GO:0032541"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783","GO:0005938"],"is_obsolete":false,"name":"cortical endoplasmic reticulum lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099021","terms_by_termid":{"GO:0099021":null}}


id: GO:0006031
data:
  {"annotated_genes":["SJAG_04868","SJAG_02845","SJAG_00442","SJAG_04728","SJAG_00978","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72677,73614,75922,76130,80040,111873],"is_not":false,"summary":null,"term":"GO:0006031"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"chitin metabolic process","termid":"GO:0006030"},{"relation_name":"is_a","term_name":"glucosamine-containing compound biosynthetic process","termid":"GO:1901073"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00978":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-6981"],"synonyms":[{"name":"beta-1,4-linked N-acetylglucosamine biosynthesis","type":"exact"},{"name":"beta-1,4-linked N-acetylglucosamine biosynthetic process","type":"exact"},{"name":"chitin anabolism","type":"exact"},{"name":"chitin biosynthesis","type":"exact"},{"name":"chitin formation","type":"exact"},{"name":"chitin synthesis","type":"exact"}],"termid":"GO:0006031","terms_by_termid":{"GO:0006031":null}}


id: GO:0019966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-1.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-1 binding","synonyms":[{"name":"IL-1 binding","type":"exact"}],"termid":"GO:0019966"}


id: PBO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin reductase","termid":"PBO:0047489"}


id: MONDO:0013387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KCNQ2-related epileptic encephalopathy is a severe form of neonatal epilepsy that usually manifests in newborns during the first week of life with seizures (that affect alternatively both sides of the body), often accompanied by clonic jerking or more complex motor behavior, as well as signs of encephalopathy such as diffuse hypotonia, limb spasticity, lack of visual fixation and tracking and mild to moderate intellectual deficiency. The severity can range from controlled to intractable seizures and mild/moderate to severe intellectual disability.","definition_xrefs":["Orphanet:439218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 7","secondary_identifiers":["DOID:0080462","MEDGEN:462336","UMLS:C3150986","GARD:13060","OMIM:613720"],"synonyms":[{"name":"DEE7","type":"exact"},{"name":"EIEE7","type":"exact"},{"name":"KCNQ2-NEE","type":"exact"},{"name":"KCNQ2-related disorders","type":"related"},{"name":"KCNQ2-related epileptic encephalopathy","type":"exact"},{"name":"KCNQ2-related neonatal epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 7","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 7","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 7","type":"exact"}],"termid":"MONDO:0013387","xrefs":{"Monarch":{"xref_id":"0013387"}}}


id: GO:1903908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:23575248","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"},{"relation_name":"positively_regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of plasma membrane raft polarization","synonyms":[{"name":"activation of plasma membrane raft polarization","type":"narrow"},{"name":"up regulation of plasma membrane raft polarization","type":"exact"},{"name":"up-regulation of plasma membrane raft polarization","type":"exact"},{"name":"upregulation of plasma membrane raft polarization","type":"exact"}],"termid":"GO:1903908"}


id: MONDO:0012064
data:
  {"annotated_genes":["SJAG_04222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87349],"is_not":false,"summary":null,"term":"MONDO:0012064"}]},"cv_name":"mondo","definition":"Choanal atresia - deafness - cardiac defects - dysmorphism syndrome, also known as Burn-McKeown syndrome, is an extremely rare multiple congenital anomaly syndrome characterized by bilateral choanal atresia associated with a characteristic cranio-facial dysmorphism (hypertelorism with narrow palpebral fissures, coloboma of inferior eyelid with presence of eyelashes medial to the defect, prominent nasal bridge, thin lips, prominent ears), that can be accompanied by hearing loss, unilateral cleft lip, preauricular tags, cardiac septal defects and anomalies of the kidneys. The features of this syndrome overlaps considerably with those of the CHARGE syndrome.","definition_xrefs":["Orphanet:1200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04222":null},"genotype_count":0,"is_obsolete":false,"name":"choanal atresia-hearing loss-cardiac defects-craniofacial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10041","DOID:0080695","MESH:C563682","OMIM:608572","MEDGEN:325265","UMLS:C1837822"],"synonyms":[{"name":"BMKS","type":"related"},{"name":"Burn-McKeown syndrome","type":"exact"},{"name":"bilateral choanal atresia, cardiac defects, deafness, and dysmorphic appearance","type":"related"},{"name":"choanal atresia deafness cardiac defects dysmorphism","type":"related"},{"name":"oculootofacial dysplasia","type":"exact"}],"termid":"MONDO:0012064","terms_by_termid":{"MONDO:0012064":null},"xrefs":{"Monarch":{"xref_id":"0012064"}}}


id: GO:1904898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15358192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast proliferation","termid":"GO:0048147"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell proliferation","termid":"GO:1904897"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell proliferation","synonyms":[{"name":"down regulation of Ito cell proliferation","type":"exact"},{"name":"down regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"down regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"down regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"down-regulation of Ito cell proliferation","type":"exact"},{"name":"down-regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"down-regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"down-regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"downregulation of Ito cell proliferation","type":"exact"},{"name":"downregulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"downregulation of hepatic stellate cell proliferation","type":"exact"},{"name":"downregulation of perisinusoidal cell proliferation","type":"exact"},{"name":"inhibition of Ito cell proliferation","type":"narrow"},{"name":"inhibition of hepatic perisinusoidal cell proliferation","type":"narrow"},{"name":"inhibition of hepatic stellate cell proliferation","type":"narrow"},{"name":"inhibition of perisinusoidal cell proliferation","type":"narrow"},{"name":"negative regulation of Ito cell proliferation","type":"exact"},{"name":"negative regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"negative regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904898"}


id: GO:0007158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a neuron to another cell via adhesion molecules.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neuron cell-cell adhesion","synonyms":[{"name":"neuron adhesion","type":"exact"},{"name":"neuronal cell adhesion","type":"exact"}],"termid":"GO:0007158"}


id: GO:0102448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = 7,4'-O-dimethylquercetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rhamnetin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13934"],"termid":"GO:0102448"}


id: GO:0050115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myosin light-chain phosphate + H2O = myosin light chain + phosphate.","definition_xrefs":["MetaCyc:MYOSIN-LIGHT-CHAIN-PHOSPHATASE-RXN","EC:3.1.3.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016787","GO:0004721","GO:0016788"],"is_obsolete":false,"name":"myosin-light-chain-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-419232"],"synonyms":[{"name":"[Myosin light-chain]-phosphatase activity","type":"exact"},{"name":"myosin light chain kinase phosphatase activity","type":"related"},{"name":"myosin light-chain kinase phosphatase activity","type":"related"},{"name":"myosin-light-chain phosphatase activity","type":"related"},{"name":"myosin-light-chain-phosphate phosphohydrolase activity","type":"related"},{"name":"protein phosphatase 2A","type":"related"}],"termid":"GO:0050115"}


id: GO:0043997
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90197],"is_not":false,"summary":null,"term":"GO:0043997"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 12) = CoA + histone H4 N6-acetyl-L-lysine (position 12).","definition_xrefs":["PMID:19056256","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0034212","GO:0003824","GO:0016746","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H4K12 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4-K12 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H4-K12 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K12 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K12 specific)","type":"exact"}],"termid":"GO:0043997","terms_by_termid":{"GO:0043997":null}}


id: PBO:0073003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 3","termid":"PBO:0073003"}


id: MONDO:0009842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoinflammatory disease with defective neutrophil function caused by a homozygous Arg219His mutation in the transcription factor C/EBPε.","definition_xrefs":["PMID:31201888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pelger-Huet-like anomaly and episodic fever with abdominal pain","secondary_identifiers":["MEDGEN:376692","MESH:C564899","UMLS:C1850054","OMIM:260570"],"synonyms":[{"name":"Pelger-Huet-like anomaly and episodic fever with abdominal pain","type":"exact"},{"name":"immunodeficiency 108 with autoinflammation","type":"exact"}],"termid":"MONDO:0009842","xrefs":{"Monarch":{"xref_id":"0009842"}}}


id: PBO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3","termid":"PBO:0000848"}


id: PBO:0047199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 216 member B","termid":"PBO:0047199"}


id: PATO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000145 liquid substance (obsolete PATO:0000145)","termid":"PATO:0000145"}


id: PBO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phosphatidylserine_absent_from_cell","termid":"PBO:0030335"}


id: PBO:0085367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphorylated protein of the mitochondrial outer membrane; localizes only to mitochondria of the bud; interacts with Myo2p to mediate mitochondrial distribution to buds; mRNA is targeted to the bud via the transport system involving She2p","termid":"PBO:0085367"}


id: PBO:0031132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_upon_G0_to_G1_transition","termid":"PBO:0031132"}


id: GO:0051449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thyrotropin-releasing hormone, a tripeptide hormone that stimulates the release of thyroid-stimulating hormone (TSH) and prolactin by the anterior pituitary and it is produced by the hypothalamus and travels across the median eminence to the pituitary via the pituitary portal system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thyrotropin-releasing hormone binding","synonyms":[{"name":"thyrotropin releasing hormone binding","type":"exact"}],"termid":"GO:0051449"}


id: PBO:0005391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein Mid1","termid":"PBO:0005391"}


id: PBO:0017514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Loc1 (predicted)","termid":"PBO:0017514"}


id: GO:1904059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of locomotor rhythm.","definition_xrefs":["PMID:16310969","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"locomotor rhythm","termid":"GO:0045475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of locomotor rhythm","synonyms":[{"name":"regulation of circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:1904059"}


id: GO:0071328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a maltose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to maltose","termid":"GO:0034286"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to maltose stimulus","termid":"GO:0071328"}


id: PBO:0049405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 2A","termid":"PBO:0049405"}


id: PBO:0030780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_bismuth","termid":"PBO:0030780"}


id: PBO:0065861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB18, member RAS oncogene family","termid":"PBO:0065861"}


id: GO:0042679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a compound eye cone cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"compound eye cone cell fate commitment","termid":"GO:0042676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell fate specification","secondary_identifiers":["GO:0042678"],"termid":"GO:0042679"}


id: GO:0044530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multicomponent complex of RNA and proteins that is composed of four active spliceosomes, termed native spliceosomes, connected to each other by the pre-mRNA. The supraspliceosome is the nuclear machine where the pre-mRNA processing takes place, like the 5'-end capping, 3'-end cleavage, splicing and editing.","definition_xrefs":["GOC:ans","GOC:jl","PMID:19282290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"supraspliceosomal complex","synonyms":[{"name":"supraspliceosome complex","type":"exact"}],"termid":"GO:0044530"}


id: GO:0032570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to progesterone","synonyms":[{"name":"response to progesterone stimulus","type":"exact"}],"termid":"GO:0032570"}


id: GO:0097562
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.","definition_xrefs":["ISBN:9780124260207","PMID:5961344","GOC:giardia","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left lateral basal body pair","termid":"GO:0097562"}


id: PBO:0068874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 114, pseudogene","termid":"PBO:0068874"}


id: PBO:0041906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene B","termid":"PBO:0041906"}


id: GO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Amplification by up to 60-fold of the loci containing the chorion gene clusters. Amplification is necessary for the rapid synthesis of chorion proteins by the follicle cells, and occurs by repeated firing of one or more origins located within each gene cluster.","definition_xrefs":["PMID:11157771","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA amplification","termid":"GO:0006277"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0044085"],"is_obsolete":false,"name":"eggshell chorion gene amplification","termid":"GO:0007307"}


id: PATO:0000974
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000974 relative porosity (obsolete PATO:0000974)","termid":"PATO:0000974"}


id: GO:0030819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP biosynthetic process (obsolete GO:0030819)","synonyms":[{"name":"activation of cAMP biosynthetic process","type":"narrow"},{"name":"positive regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"positive regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"positive regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"positive regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"positive regulation of cAMP anabolism","type":"exact"},{"name":"positive regulation of cAMP biosynthesis","type":"exact"},{"name":"positive regulation of cAMP formation","type":"exact"},{"name":"positive regulation of cAMP synthesis","type":"exact"},{"name":"positive regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"positive regulation of cyclic AMP biosynthetic process","type":"exact"},{"name":"stimulation of cAMP biosynthetic process","type":"narrow"},{"name":"up regulation of cAMP biosynthetic process","type":"exact"},{"name":"up-regulation of cAMP biosynthetic process","type":"exact"},{"name":"upregulation of cAMP biosynthetic process","type":"exact"}],"termid":"GO:0030819"}


id: PBO:0084333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related antiparallel sliding motor protein; involved in mitotic spindle positioning; sliding activity promotes bipolar spindle assembly and maintenance of genome stability; inhibits spindle elongation, destabilizing late anaphase spindle microtubules that polymerize beyond the midzone","termid":"PBO:0084333"}


id: GO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type I hypersensitivity","termid":"GO:0001810"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"negatively_regulates","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type I hypersensitivity","synonyms":[{"name":"down regulation of type I hypersensitivity","type":"exact"},{"name":"down-regulation of type I hypersensitivity","type":"exact"},{"name":"downregulation of type I hypersensitivity","type":"exact"},{"name":"inhibition of type I hypersensitivity","type":"narrow"}],"termid":"GO:0001811"}


id: MONDO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital narrowing of a segment of the aorta. Signs and symptoms include hypertension, muscle weakness, shortness of breath, headaches and leg cramps.","definition_xrefs":["NCIT:C84567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorta coarctation","secondary_identifiers":["NANDO:2200283","UMLS:C0003492","ICD9:747.10","icd11.foundation:1524185114","MedDRA:10009807","MESH:D001017","GARD:5828","OMIM:120000","NANDO:2200284","EFO:1001267","SCTID:7305005","ICD10CM:Q25.1","MEDGEN:1617","Orphanet:1457"],"synonyms":[{"name":"aortic coarctation","type":"exact"},{"name":"coarctation of aorta","type":"related"},{"name":"coarctation of the aorta","type":"related"}],"termid":"MONDO:0007345","xrefs":{"Monarch":{"xref_id":"0007345"}}}


id: GO:0006978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["PMID:10967424"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (obsolete GO:0006978)","termid":"GO:0006978"}


id: GO:0050018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-amino acid + H2O + NAD+ = a 2-oxo acid + NH3 + NADH.","definition_xrefs":["EC:1.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-amino-acid dehydrogenase activity","secondary_identifiers":["RHEA:10396","MetaCyc:L-AMINO-ACID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-amino-acid:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050018"}


id: PBO:0091989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA","termid":"PBO:0091989"}


id: PBO:0029895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_vegetative_cell","termid":"PBO:0029895"}


id: GO:0016488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol catabolic process","termid":"GO:0016095"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"farnesol metabolic process","termid":"GO:0016487"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"farnesol catabolic process","synonyms":[{"name":"farnesol breakdown","type":"exact"},{"name":"farnesol catabolism","type":"exact"},{"name":"farnesol degradation","type":"exact"}],"termid":"GO:0016488"}


id: MONDO:1011057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, pig","secondary_identifiers":["OMIA:000807-9823"],"termid":"MONDO:1011057","xrefs":{"Monarch":{"xref_id":"1011057"}}}


id: GO:0099645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a neurotransmitter is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. postsynaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic specialization membrane","termid":"GO:0099633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor localization to postsynaptic specialization membrane","synonyms":[{"name":"neurotransmitter receptor localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099645"}


id: GO:1900376
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900376","terms_by_termid":{"GO:1905569":null}}


id: PBO:0055934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 40","termid":"PBO:0055934"}


id: GO:0046654
data:
  {"annotated_genes":["SJAG_02225","SJAG_00106","SJAG_01198","SJAG_03275","SJAG_02408","SJAG_00815","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57136,61203,72752,81485,107892],"is_not":false,"summary":null,"term":"GO:0046654"},{"annotations":[114248,110164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"tetrahydrofolate metabolic process","termid":"GO:0046653"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01198":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042559","GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FOLSYN-PWY"],"synonyms":[{"name":"tetrahydrofolate anabolism","type":"exact"},{"name":"tetrahydrofolate biosynthesis","type":"exact"},{"name":"tetrahydrofolate formation","type":"exact"},{"name":"tetrahydrofolate synthesis","type":"exact"}],"termid":"GO:0046654","terms_by_termid":{"GO:0009257":null,"GO:0046654":null}}


id: MONDO:0007589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FZD4-related exudative vitreoretinopathy","termid":"MONDO:1040041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy 1","secondary_identifiers":["MEDGEN:343561","OMIM:133780","DOID:0111412","MESH:C536382","GARD:15068","NCIT:C175048","UMLS:C1851402"],"synonyms":[{"name":"Criswick-Schepens syndrome","type":"related"},{"name":"EVR1","type":"related"},{"name":"FEVR, autosomal dominant","type":"related"},{"name":"exudative vitreoretinopathy 1","type":"exact"},{"name":"exudative vitreoretinopathy type 1","type":"exact"},{"name":"exudative vitreoretinopathy, familial, autosomal dominant","type":"related"},{"name":"retinopathy of prematurity","type":"related"}],"termid":"MONDO:0007589","xrefs":{"Monarch":{"xref_id":"0007589"}}}


id: PBO:0090468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and protein import chaperone Mge1","termid":"PBO:0090468"}


id: PBO:0052725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 17","termid":"PBO:0052725"}


id: PBO:0071354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 13","termid":"PBO:0071354"}


id: GO:1990953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of vesicles and protein complexes carried out by molecular motors, kinesins and dynein, along the microtubule tracks within the manchette and by myosin along actin filaments.","definition_xrefs":["PMID:24440897","PMID:22319670","PMID:26792866","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"intramanchette transport","synonyms":[{"name":"IMT","type":"related"}],"termid":"GO:1990953"}


id: GO:1900626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of arugosin biosynthetic process","synonyms":[{"name":"regulation of arugosin anabolism","type":"exact"},{"name":"regulation of arugosin biosynthesis","type":"exact"},{"name":"regulation of arugosin formation","type":"exact"},{"name":"regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900626"}


id: PBO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_acquisition_of_features_of","termid":"PBO:0012539"}


id: GO:0034393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle cell apoptotic process","termid":"GO:0010661"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"activation of smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of SMC apoptosis","type":"exact"},{"name":"positive regulation of smooth muscle cell apoptosis","type":"narrow"},{"name":"stimulation of smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"up-regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"upregulation of smooth muscle cell apoptosis","type":"exact"}],"termid":"GO:0034393"}


id: GO:0051239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a multicellular organismal process, the processes pertinent to the function of a multicellular organism above the cellular level; includes the integrated processes of tissues and organs.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of multicellular organismal process","termid":"GO:0051239"}


id: MONDO:0100207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy starting in the first 12 months of life, including self-limiting and refractory seizures, and epilepsies with and without developmental disorders.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infantile-onset epilepsy","termid":"MONDO:0100207","xrefs":{"Monarch":{"xref_id":"0100207"}}}


id: PBO:0068623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 3, pseudogene","termid":"PBO:0068623"}


id: MONDO:0850170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood spinal muscular atrophy that is evident before birth and characterized by diminished movement in the womb, joint deformities, extremely weak muscle tone and very weak respiratory muscles.","definition_xrefs":["DOID:0080667"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal muscular atrophy, type 1","termid":"MONDO:0009669"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy type 0","secondary_identifiers":["MEDGEN:1843403","UMLS:C4324643"],"termid":"MONDO:0850170","xrefs":{"Monarch":{"xref_id":"0850170"}}}


id: PBO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 1","termid":"PBO:0046962"}


id: GO:1903421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:pad","PMID:22745285","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle recycling","synonyms":[{"name":"regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903421"}


id: GO:1990922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hepatic stellate cells, resulting in the expansion of a hepatic stellate cell population. Hepatic stellate cells are found in the perisinusoidal space of the liver, and are capable of multiple roles including storage of retinol, presentation of antigen to T cells (including CD1d-restricted NKT cells), and upon activation, production of extracellular matrix components. This cell type comprises approximately 8-15% of total cells in the liver.","definition_xrefs":["PMID:15358192","GOC:sl","PMID:18466260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell proliferation","synonyms":[{"name":"Ito cell proliferation","type":"exact"},{"name":"hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1990922"}


id: PBO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030673"}


id: PBO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3 (predicted)","termid":"PBO:0003043"}


id: MOD:01731
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01731"}


id: PR:Q10155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trz1 gene.","definition_xrefs":["UniProtKB:Q10155","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease Z 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.10","synonyms":[{"name":"RNase Z 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-trz1","type":"exact"},{"name":"tRNA 3 endonuclease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNase Z 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10155"}


id: GO:0047576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoate + H2O = 4-hydroxybenzoate + chloride + H+.","definition_xrefs":["RHEA:23440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"4-chlorobenzoate dehalogenase activity","secondary_identifiers":["EC:3.8.1.6","KEGG_REACTION:R01307","MetaCyc:4-CHLOROBENZOATE-DEHALOGENASE-RXN"],"synonyms":[{"name":"4-chlorobenzoate chlorohydrolase activity","type":"related"},{"name":"halobenzoate dehalogenase activity","type":"related"}],"termid":"GO:0047576"}


id: SO:1001267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001267 stop_codon_readthrough (obsolete SO:1001267)","termid":"SO:1001267"}


id: GO:0120253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["Wikipedia:Hydrocarbon","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon catabolic process","synonyms":[{"name":"hydrocarbon breakdown","type":"exact"},{"name":"hydrocarbon catabolism","type":"exact"},{"name":"hydrocarbon degradation","type":"exact"}],"termid":"GO:0120253"}


id: PBO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of PIm","termid":"PBO:0004940"}


id: GO:0034424
data:
  {"annotated_genes":["SJAG_03511","SJAG_07012"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76991,100649],"is_not":false,"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"A membrane-associated protein complex that is required for a late stage of endosomal transport. In budding yeast, this complex consists of Vps55p and Vps68p proteins.","definition_xrefs":["PMID:18216282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03511":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Vps55/Vps68 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034424","terms_by_termid":{"GO:0034424":null}}


id: GO:1904471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelin production.","definition_xrefs":["GO_REF:0000058","PMID:15560120","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of endothelin production","termid":"GO:1904470"},{"relation_name":"negatively_regulates","term_name":"endothelin production","termid":"GO:1990775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelin production","synonyms":[{"name":"down regulation of EDN1 secretion","type":"narrow"},{"name":"down regulation of EDN2 secretion","type":"narrow"},{"name":"down regulation of EDN3 secretion","type":"narrow"},{"name":"down regulation of endothelin secretion","type":"exact"},{"name":"down regulation of endothelin-1 secretion","type":"narrow"},{"name":"down regulation of endothelin-2 secretion","type":"narrow"},{"name":"down regulation of endothelin-3 secretion","type":"narrow"},{"name":"down-regulation of EDN1 secretion","type":"narrow"},{"name":"down-regulation of EDN2 secretion","type":"narrow"},{"name":"down-regulation of EDN3 secretion","type":"narrow"},{"name":"down-regulation of endothelin secretion","type":"exact"},{"name":"down-regulation of endothelin-1 secretion","type":"narrow"},{"name":"down-regulation of endothelin-2 secretion","type":"narrow"},{"name":"down-regulation of endothelin-3 secretion","type":"narrow"},{"name":"downregulation of EDN1 secretion","type":"narrow"},{"name":"downregulation of EDN2 secretion","type":"narrow"},{"name":"downregulation of EDN3 secretion","type":"narrow"},{"name":"downregulation of endothelin secretion","type":"exact"},{"name":"downregulation of endothelin-1 secretion","type":"narrow"},{"name":"downregulation of endothelin-2 secretion","type":"narrow"},{"name":"downregulation of endothelin-3 secretion","type":"narrow"},{"name":"inhibition of EDN1 secretion","type":"narrow"},{"name":"inhibition of EDN2 secretion","type":"narrow"},{"name":"inhibition of EDN3 secretion","type":"narrow"},{"name":"inhibition of endothelin secretion","type":"narrow"},{"name":"inhibition of endothelin-1 secretion","type":"narrow"},{"name":"inhibition of endothelin-2 secretion","type":"narrow"},{"name":"inhibition of endothelin-3 secretion","type":"narrow"},{"name":"negative regulation of EDN1 secretion","type":"narrow"},{"name":"negative regulation of EDN2 secretion","type":"narrow"},{"name":"negative regulation of EDN3 secretion","type":"narrow"},{"name":"negative regulation of endothelin secretion","type":"narrow"},{"name":"negative regulation of endothelin-1 secretion","type":"narrow"},{"name":"negative regulation of endothelin-2 secretion","type":"narrow"},{"name":"negative regulation of endothelin-3 secretion","type":"narrow"}],"termid":"GO:1904471"}


id: PBO:0082220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-agglutinin of alpha-cells; binds to Aga1p during agglutination, N-terminal half is homologous to the immunoglobulin superfamily and contains binding site for a-agglutinin, C-terminal half is highly glycosylated and contains GPI anchor","termid":"PBO:0082220"}


id: GO:0046714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to borate, the anion (BO3)3-.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"borate binding","synonyms":[{"name":"boron binding","type":"related"}],"termid":"GO:0046714"}


id: PBO:0030838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenine_import","termid":"PBO:0030838"}


id: GO:0008399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of naphthalene to naphthalene 1,2-oxide.","definition_xrefs":["PMID:1981702","PMID:1742282"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene hydroxylase activity (obsolete GO:0008399)","synonyms":[{"name":"cytochrome P450 CYP2F2","type":"narrow"}],"termid":"GO:0008399"}


id: PBO:0044311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561","termid":"PBO:0044311"}


id: MONDO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize familiar voices.","definition_xrefs":["DOID:0060146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phonagnosia","termid":"MONDO:0000676","xrefs":{"Monarch":{"xref_id":"0000676"}}}


id: MONDO:1011493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dog","secondary_identifiers":["OMIA:000327-9615"],"termid":"MONDO:1011493","xrefs":{"Monarch":{"xref_id":"1011493"}}}


id: PBO:0089278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L2","termid":"PBO:0089278"}


id: GO:0043617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sucrose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sucrose starvation","termid":"GO:0043617"}


id: MONDO:0009332
data:
  {"annotated_genes":["SJAG_01732","SJAG_01960","SJAG_01759","SJAG_01162","SJAG_02208","SJAG_02708","SJAG_02453","SJAG_03089","SJAG_01351","SJAG_00988","SJAG_03684","SJAG_02556","SJAG_02297","SJAG_04334","SJAG_00088","SJAG_01798","SJAG_00930","SJAG_02330","SJAG_01410","SJAG_02339","SJAG_04509","SJAG_00319","SJAG_04473","SJAG_03115","SJAG_05180","SJAG_03153","SJAG_00839","SJAG_02539","SJAG_03889","SJAG_04495","SJAG_02796","SJAG_00611","SJAG_01852"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[87191,87190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[87234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[86754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[88059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[88489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[86742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[88762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[88766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[88763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[87643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[87953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[87925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[88615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[87716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[86944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[87350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[87639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[88646,88647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024553"},{"annotations":[89012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013307"},{"annotations":[87977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[87836,87837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[88436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[88207,88208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[88532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[87440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[87335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[88850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"},{"annotations":[88372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A disorder of the blood that is present at birth.","definition_xrefs":["NCIT:C104003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic 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disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3267032","MEDGEN:760584"],"synonyms":[{"name":"congenital haematological system disease","type":"exact"},{"name":"congenital hematological disorder","type":"exact"},{"name":"congenital hematological system disease","type":"exact"}],"termid":"MONDO:0009332","terms_by_termid":{"MONDO:0007109":null,"MONDO:0009134":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009340":null,"MONDO:0009950":null,"MONDO:0009953":null,"MONDO:0010121":null,"MONDO:0010294":null,"MONDO:0010480":null,"MONDO:0011405":null,"MONDO:0011997":null,"MONDO:0012465":null,"MONDO:0012559":null,"MONDO:0013248":null,"MONDO:0013275":null,"MONDO:0013307":null,"MONDO:0013499":null,"MONDO:0014108":null,"MONDO:0014118":null,"MONDO:0014757":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0019531":null,"MONDO:0024553":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0009332"}}}


id: GO:0032072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a restriction endodeoxyribonuclease activity, the catalysis of endonucleolytic cleavage of DNA in a site-specific manner, resulting in double-strand breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endodeoxyribonuclease activity","termid":"GO:0032071"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"}


id: PBO:0048805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 1","termid":"PBO:0048805"}


id: GO:0099510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed change of cytosolic calcium ion concentration in the cytosol via the reversible binding of calcium ions to calcium-binding proteins in the cytosol thereby modulating the spatial and temporal dynamics of changes in cytosolic calcium concentrations.","definition_xrefs":["PMID:24442513","PMID:26190970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion binding","termid":"GO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcium ion binding involved in regulation of cytosolic calcium ion concentration","synonyms":[{"name":"regulation of cytosolic calcium ion concentration by calcium ion buffering","type":"exact"}],"termid":"GO:0099510"}


id: PBO:0064331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 1","termid":"PBO:0064331"}


id: PBO:0011452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex subunit Vps11 (predicted)","termid":"PBO:0011452"}


id: PBO:0057109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 199a-1","termid":"PBO:0057109"}


id: SO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration whereby the copy number of a given regions is greater than the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_gain","synonyms":[{"name":"copy number gain","type":"exact"},{"name":"gain","type":"related"}],"termid":"SO:0001742"}


id: PBO:0028900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028900"}


id: PBO:0029659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029659"}


id: PBO:0036228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, malic enzyme with 2 frameshifts","termid":"PBO:0036228"}


id: PBO:0086284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in cellular adhesion and filamentous growth; also endosome-to-vacuole sorting; similar to Tmn3p; member of Transmembrane Nine family of proteins with 9 transmembrane segments; EMP70 has a paralog, TMN2, that arose from the whole genome duplication","termid":"PBO:0086284"}


id: PBO:0043754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 2","termid":"PBO:0043754"}


id: GO:0018332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of threonine to form N6-(phospho-5'-adenosine)-L-threonine, found in the active site of bovine phosphodiesterase I.","definition_xrefs":["RESID:AA0267"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-(phospho-5'-adenosine)-L-threonine (obsolete GO:0018332)","termid":"GO:0018332"}


id: PBO:0091166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial succinate dehydrogenase assembly factor, LYR family Sdh6","termid":"PBO:0091166"}


id: MONDO:0100205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 4.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent","PMID:27197630","PMID:21636318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 4 infectious disease","synonyms":[{"name":"human rubulavirus 4 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 4","type":"exact"},{"name":"infection caused by parainfluenza virus 4","type":"related"},{"name":"infection due to human parainfluenza virus 4","type":"exact"},{"name":"infection due to parainfluenza virus 4","type":"related"}],"termid":"MONDO:0100205","xrefs":{"Monarch":{"xref_id":"0100205"}}}


id: GO:0033352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-apiose, uridinediphosphoapicose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-apiose metabolic process","termid":"GO:0033351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-D-apiose biosynthetic process","synonyms":[{"name":"UDP-D-apiose anabolism","type":"exact"},{"name":"UDP-D-apiose biosynthesis","type":"exact"},{"name":"UDP-D-apiose formation","type":"exact"},{"name":"UDP-D-apiose synthesis","type":"exact"}],"termid":"GO:0033352"}


id: FYPO:0000845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is abnormal. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein degradation during vegetative growth","synonyms":[{"name":"abnormal protein breakdown during vegetative growth","type":"exact"},{"name":"abnormal protein catabolic process during vegetative growth","type":"exact"},{"name":"abnormal protein catabolism during vegetative growth","type":"exact"},{"name":"abnormal protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000845"}


id: GO:0003164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the His-Purkinje system over time, from its formation to the mature structure. The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"},{"relation_name":"part_of","term_name":"cardiac conduction system development","termid":"GO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system development","termid":"GO:0003164"}


id: CHEBI:30812
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron dichloride","termid":"CHEBI:30812"}


id: PBO:0042285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1e molecule","termid":"PBO:0042285"}


id: GO:0051200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of prosthetic group metabolic process (obsolete GO:0051200)","synonyms":[{"name":"activation of prosthetic group metabolic process","type":"narrow"},{"name":"positive regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"positive regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"positive regulation of prosthetic group metabolism","type":"exact"},{"name":"stimulation of prosthetic group metabolic process","type":"narrow"},{"name":"up regulation of prosthetic group metabolic process","type":"exact"},{"name":"up-regulation of prosthetic group metabolic process","type":"exact"},{"name":"upregulation of prosthetic group metabolic process","type":"exact"}],"termid":"GO:0051200"}


id: GO:0010104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ethylene (ethene) signal transduction.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorelay signal transduction system","termid":"GO:0070297"},{"relation_name":"regulates","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ethylene-activated signaling pathway","synonyms":[{"name":"regulation of ethene mediated signaling pathway","type":"exact"},{"name":"regulation of ethene mediated signalling pathway","type":"exact"},{"name":"regulation of ethylene mediated signaling pathway","type":"related"},{"name":"regulation of ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0010104"}


id: GO:0021789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","PMID:14699587","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance","termid":"GO:0021785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"}


id: MONDO:0013255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arthrogryposis-renal dysfunction-cholestasis syndrome in which the cause of the disease is a mutation in the VIPAS39 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis-renal dysfunction-cholestasis syndrome","termid":"MONDO:0017123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"arthrogryposis, renal dysfunction, and cholestasis 2","secondary_identifiers":["OMIM:613404","UMLS:C3150672","DOID:0111354","MEDGEN:462022","GARD:15658"],"synonyms":[{"name":"ARCS2","type":"related"},{"name":"VIPAS39 arthrogryposis-renal dysfunction-cholestasis syndrome","type":"exact"},{"name":"arthrogryposis, renal dysfunction, and cholestasis 2","type":"exact"},{"name":"arthrogryposis, renal dysfunction, and cholestasis type 2","type":"exact"},{"name":"arthrogryposis-renal dysfunction-cholestasis syndrome caused by mutation in VIPAS39","type":"exact"}],"termid":"MONDO:0013255","xrefs":{"Monarch":{"xref_id":"0013255"}}}


id: GO:0102379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = stevioside + UDP.","definition_xrefs":["RHEA:61744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (stevioside forming)","secondary_identifiers":["MetaCyc:RXN-13514"],"termid":"GO:0102379"}


id: MONDO:0019468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing type of leukemia (blood cancer) in which too many lymphocytes are found in the bone marrow and/or blood. The T-cell is specified as the defective cell line.","definition_xrefs":["NCIT:C70649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"},{"relation_name":"is_a","term_name":"prolymphocytic leukemia","termid":"MONDO:0001023"},{"relation_name":"is_a","term_name":"precursor T-lymphoblastic lymphoma/leukemia","termid":"MONDO:0003537"},{"relation_name":"is_a","term_name":"T-cell acute lymphoblastic leukemia","termid":"MONDO:0004963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"T-cell prolymphocytic leukemia","secondary_identifiers":["NCIT:C4752","ICDO:9834/3","Orphanet:86871","UMLS:C2363142","SCTID:277545003","MedDRA:10042985","EFO:1000560","MEDGEN:391707","MESH:D015461","SCTID:277567002","icd11.foundation:352523899","ONCOTREE:TPLL","GARD:13731","DOID:0081042"],"synonyms":[{"name":"CLL, T-cell","type":"exact"},{"name":"T cell CLL","type":"exact"},{"name":"T cell chronic lymphocytic leukaemia","type":"exact"},{"name":"T cell chronic lymphocytic leukemia","type":"exact"},{"name":"T cell prolymphocytic leukaemia","type":"exact"},{"name":"T cell prolymphocytic leukemia","type":"exact"},{"name":"T prolymphocytic leukaemia","type":"exact"},{"name":"T prolymphocytic leukemia","type":"exact"},{"name":"T-PLL","type":"exact"},{"name":"T-cell CLL","type":"exact"},{"name":"T-cell chronic lymphocytic leukaemia","type":"exact"},{"name":"T-cell chronic lymphocytic leukemia","type":"exact"},{"name":"T-cell prolymphocytic leukemia","type":"exact"},{"name":"TPLL","type":"related"},{"name":"chronic T-cell leukaemia","type":"narrow"},{"name":"chronic T-cell leukemia","type":"narrow"},{"name":"chronic T-cell lymphocytic leukaemia","type":"narrow"},{"name":"chronic T-cell lymphocytic leukemia","type":"narrow"},{"name":"leukemia, T-cell, chronic","type":"related"}],"termid":"MONDO:0019468","xrefs":{"Monarch":{"xref_id":"0019468"}}}


id: PBO:0067523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 666, pseudogene","termid":"PBO:0067523"}


id: PBO:0063109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 2","termid":"PBO:0063109"}


id: PBO:0028286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0028286"}


id: PBO:0050268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 46","termid":"PBO:0050268"}


id: GO:0032309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of icosanoids, any of a group of C20 polyunsaturated fatty acids from a cell or a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"icosanoid secretion","synonyms":[{"name":"eicosanoid secretion","type":"exact"}],"termid":"GO:0032309"}


id: PBO:0077147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase","termid":"PBO:0077147"}


id: MONDO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex (EBS) is a group of hereditary epidermolysis bullosa (HEB) disorders characterized by skin fragility resulting in intraepidermal blisters and erosions that occur either spontaneously or after physical trauma.","definition_xrefs":["Orphanet:304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited epidermolysis bullosa","termid":"MONDO:0019276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex","secondary_identifiers":["NANDO:2201341","NANDO:2201375","OMIMPS:131760","MEDGEN:86896","SCTID:67144006","MESH:D016110","NANDO:1200235","DOID:4644","NCIT:C84692","GARD:10752","UMLS:C0079298","ICD9:757.39","ICD10CM:Q81.0","icd11.foundation:1860717527"],"synonyms":[{"name":"EBS","type":"exact"},{"name":"EEB","type":"exact"},{"name":"epidermolysis bullosa intraepidermic","type":"related"},{"name":"epidermolysis bullosa simplex","type":"exact"}],"termid":"MONDO:0017610","xrefs":{"Monarch":{"xref_id":"0017610"}}}


id: PBO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-6, pseudogene","termid":"PBO:0052914"}


id: PBO:0072213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 12","termid":"PBO:0072213"}


id: GO:1990100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DNA helicase DnaB, and the DNA helicase loader DnaC. The helicase loader DnaC delivers DnaB to the chromosomal origin (oriC).","definition_xrefs":["GOC:bhm","PMID:20129058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaB-DnaC complex","synonyms":[{"name":"DnaB6-DnaC3 complex","type":"narrow"},{"name":"DnaB6-DnaC6 complex","type":"narrow"},{"name":"helicase-loading complex","type":"broad"}],"termid":"GO:1990100"}


id: PBO:0050308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 10","termid":"PBO:0050308"}


id: MONDO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polydactyly, preaxial (obsolete MONDO:0000086)","termid":"MONDO:0000086","xrefs":{"Monarch":{"xref_id":"0000086"}}}


id: GO:0008655
data:
  {"annotated_genes":["SJAG_03708","SJAG_04067","SJAG_04354","SJAG_04709","SJAG_01970","SJAG_04713","SJAG_00533","SJAG_04712","SJAG_03362","SJAG_04264","SJAG_05029","SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92423],"is_not":false,"summary":null,"term":"GO:0008655"},{"annotations":[69538,94743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[90223],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903931"},{"annotations":[99520,115655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[101311,112273,112274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[69537,93746,89225,90219,94744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[93747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates a pyrimidine-containing compound, a nucleobase, nucleoside, nucleotide or nucleic acid that contains a pyrimidine base, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00957":null,"SJAG_01970":null,"SJAG_03362":null,"SJAG_03708":null,"SJAG_04067":null,"SJAG_04264":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04712":null,"SJAG_04713":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine salvage","type":"related"}],"termid":"GO:0008655","terms_by_termid":{"GO:0006223":null,"GO:0008655":null,"GO:0036172":null,"GO:0043097":null,"GO:0044206":null,"GO:0044211":null,"GO:1903931":null}}


id: PBO:0053950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1255","termid":"PBO:0053950"}


id: MONDO:0017891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited renal cancer-predisposing syndrome (obsolete MONDO:0017891)","secondary_identifiers":["Orphanet:319328"],"termid":"MONDO:0017891","xrefs":{"Monarch":{"xref_id":"0017891"}}}


id: GO:0042781
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71746,82097],"is_not":false,"summary":null,"term":"GO:0042781"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing extra 3' nucleotides from tRNA precursor, generating 3' termini of tRNAs. A 3'-hydroxy group is left at the tRNA terminus and a 5'-phosphoryl group is left at the trailer molecule.","definition_xrefs":["PMID:12032089","EC:3.1.26.11","PMID:21208191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific ribonuclease activity","termid":"GO:0004549"},{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0140101","GO:0140098","GO:0016788"],"is_obsolete":false,"name":"3'-tRNA processing endoribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.1.26.11-RXN"],"synonyms":[{"name":"3 tRNase activity","type":"related"},{"name":"3' tRNA processing endoribonuclease activity","type":"exact"},{"name":"3' tRNase activity","type":"exact"},{"name":"RNase Z activity","type":"broad"},{"name":"ribonuclease Z activity","type":"broad"},{"name":"tRNA 3 endonuclease activity","type":"related"},{"name":"tRNA 3' endonuclease activity","type":"exact"},{"name":"tRNAse Z","type":"related"}],"termid":"GO:0042781","terms_by_termid":{"GO:0042781":null}}


