# terms

id: PBO:0055513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2947","termid":"PBO:0055513"}


id: MONDO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of neoplasms composed of T-lymphocytes with a mature (peripheral/post-thymic) immunophenotypic profile and/or NK-cells.","definition_xrefs":["NCIT:C27909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell and NK-cell neoplasm","termid":"MONDO:0024615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"neoplasm of mature T-cells or NK-cells","secondary_identifiers":["ONCOTREE:MTNN","MEDGEN:233675","UMLS:C1334640","EFO:0002426"],"synonyms":[{"name":"mature T and NK neoplasms","type":"exact"},{"name":"mature T-cell and NK-cell neoplasm","type":"exact"},{"name":"mature T-cell neoplasm","type":"exact"}],"termid":"MONDO:0005169","xrefs":{"Monarch":{"xref_id":"0005169"}}}


id: PBO:0042796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 250","termid":"PBO:0042796"}


id: SO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-protein_coding gene that encodes a guide_RNA.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gRNA_encoding","synonyms":[{"name":"gRNA encoding","type":"exact"}],"termid":"SO:0000979"}


id: PBO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 2 receptor","termid":"PBO:0048703"}


id: PBO:0090120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsr1","termid":"PBO:0090120"}


id: MONDO:0019604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare monoclonalgammopathy characterized by renal proximal tubule dysfunction secondary to monoclonal kappa light chain deposits in proximal tubular cells. Clinical presentation is with variable chronic kidney disease, low molecular weight proteinuria, aminoaciduria, hyperphosphaturia, uricosuria, bicarbonaturia, and non-diabetic glycosuria. Renal phosphate and urate wasting may cause hypophosphatemia and hypouricaemia.","definition_xrefs":["Orphanet:91136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoclonal gammopathy","termid":"MONDO:0004960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired monoclonal Ig light chain-associated Fanconi syndrome","secondary_identifiers":["SCTID:724099000","MEDGEN:1375627","UMLS:C4510369","GARD:19154"],"synonyms":[{"name":"acquired Fanconi syndrome secondary to monoclonal gammopathy","type":"exact"},{"name":"acquired monoclonal immunoglobulin light chain-associated Fanconi syndrome","type":"exact"}],"termid":"MONDO:0019604","xrefs":{"Monarch":{"xref_id":"0019604"}}}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: GO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to telethonin, a protein found in the Z disc of striated muscle and which is a substrate of the titin kinase.","definition_xrefs":["PMID:10481174","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"telethonin binding","termid":"GO:0031433"}


id: FYPO:0002478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and is curved along the long axis, and in which vacuoles are more visible (usually by microscopy) than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"viable curved vacuolated vegetative cell","synonyms":[{"name":"curved vacuolated viable cell","type":"exact"},{"name":"viable curved vacuolated cell during vegetative growth","type":"exact"},{"name":"viable curved vacuolated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002478"}


id: GO:0060198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted vesicle","synonyms":[{"name":"clathrin sculpted vesicle","type":"exact"}],"termid":"GO:0060198"}


id: GO:0034288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a disaccharide is received and converted into a molecular signal.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbohydrate stimulus","termid":"GO:0009730"},{"relation_name":"is_a","term_name":"response to disaccharide","termid":"GO:0034285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of disaccharide stimulus","synonyms":[{"name":"perception of disaccharide stimulus","type":"related"}],"termid":"GO:0034288"}


id: GO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of thioredoxin, a small disulfide-containing redox protein that serves as a general protein disulfide oxidoreductase.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin reduction (obsolete GO:0042964)","synonyms":[{"name":"thioredoxin anabolism","type":"exact"},{"name":"thioredoxin biosynthesis","type":"exact"},{"name":"thioredoxin formation","type":"exact"},{"name":"thioredoxin synthesis","type":"exact"}],"termid":"GO:0042964"}


id: GO:0062102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a female germline stem cell to produce two germline stem cells of the same type as the parent.","definition_xrefs":["PMID:30248087","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell symmetric division","termid":"GO:0098729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germline stem cell symmetric division","termid":"GO:0062102"}


id: GO:0015030
data:
  {"annotated_genes":["SJAG_03901","SJAG_01761"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97815,116955],"is_not":false,"summary":null,"term":"GO:0015030"}]},"cv_name":"cellular_component","definition":"A class of nuclear body, first seen after silver staining by Ramon y Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA.","definition_xrefs":["PMID:7559785","PMID:11031238","NIF_Subcellular:nlx_subcell_090901","PMID:10944589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01761":null,"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"Cajal body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cajal_body"],"synonyms":[{"name":"Gemini of coiled bodies","type":"related"},{"name":"Gems","type":"related"},{"name":"coiled body","type":"exact"}],"termid":"GO:0015030","terms_by_termid":{"GO:0015030":null}}


id: MONDO:0015037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type D (LCHd) is a form of lissencephaly with cerebellar hypoplasia characterized by pronounced microcephaly (at least B1 3 SD), intellectual disability, spastic diplegia and moderate to severe cerebellar hypoplasia involving both vermis and hemispheres.","definition_xrefs":["Orphanet:100014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type D","secondary_identifiers":["MEDGEN:895252","UMLS:C4274991","GARD:19734","icd11.foundation:1633599738","SCTID:715821000"],"termid":"MONDO:0015037","xrefs":{"Monarch":{"xref_id":"0015037"}}}


id: MONDO:0012881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 7","secondary_identifiers":["OMIM:612371","UMLS:C2700438","MESH:C567529","MEDGEN:438008"],"synonyms":[{"name":"MAFD7","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 7","type":"exact"},{"name":"major affective disorder type 7","type":"exact"},{"name":"major affective disorder-7, susceptibility to","type":"exact"}],"termid":"MONDO:0012881","xrefs":{"Monarch":{"xref_id":"0012881"}}}


id: PR:Q09819
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cph1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.05","synonyms":[{"name":"Spom972h-cph1","type":"exact"}],"termid":"PR:Q09819"}


id: PBO:0078923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-2","termid":"PBO:0078923"}


id: GO:0050203
data:
  {"annotated_genes":["SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117608],"is_not":false,"summary":null,"term":"GO:0050203"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + oxalate = AMP + diphosphate + H+ + oxalyl-CoA.","definition_xrefs":["RHEA:18293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxalate-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:6.2.1.8","KEGG_REACTION:R01558","MetaCyc:OXALATE--COA-LIGASE-RXN"],"synonyms":[{"name":"oxalate:CoA ligase (AMP-forming)","type":"related"},{"name":"oxalyl coenzyme A synthetase activity","type":"related"},{"name":"oxalyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050203","terms_by_termid":{"GO:0050203":null}}


id: PBO:0066844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 144","termid":"PBO:0066844"}


id: PBO:0084757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix protein involved in Fe-S cluster biogenesis; facilitates [4Fe-2S] cluster inception into mitochondrial proteins such as lipoate synthase and succinate dehydrogenase; interacts and may function with Grx5p at an early step in Fe-S cluster biosynthesis; forms dimeric complexes with Grx5p and Nfu1p that alter the stability of shared Fe/S clusters; sequence similarity to human BOLA family member, BOLA1 and S. pombe uvi31, a putative DNA repair protein","termid":"PBO:0084757"}


id: MONDO:0017261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic diseases with panuveitis (obsolete MONDO:0017261)","secondary_identifiers":["Orphanet:280933"],"termid":"MONDO:0017261","xrefs":{"Monarch":{"xref_id":"0017261"}}}


id: PBO:0116733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 interacting DNA helicase 1","termid":"PBO:0116733"}


id: GO:0060294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Movement of cilia mediated by motor proteins that contributes to the movement of a cell.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium movement","termid":"GO:0003341"},{"relation_name":"part_of","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium movement involved in cell motility","termid":"GO:0060294"}


id: PBO:0077408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 143","termid":"PBO:0077408"}


id: PBO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_projection_absent","termid":"PBO:0031838"}


id: GO:0006457
data:
  {"annotated_genes":["SJAG_00524","SJAG_03815","SJAG_03414","SJAG_01874","SJAG_00505","SJAG_04371","SJAG_00954","SJAG_03166","SJAG_02413","SJAG_03570","SJAG_02926","SJAG_04155","SJAG_03237","SJAG_02461","SJAG_00196","SJAG_03463","SJAG_04012","SJAG_01545","SJAG_01914","SJAG_04121","SJAG_04518","SJAG_00753","SJAG_01121","SJAG_04014","SJAG_01160","SJAG_01684","SJAG_00574","SJAG_04055","SJAG_00983","SJAG_01664","SJAG_03794","SJAG_01526","SJAG_02825","SJAG_03784","SJAG_05206","SJAG_01747","SJAG_00790","SJAG_01615","SJAG_04187","SJAG_03601","SJAG_00564","SJAG_02014","SJAG_02032","SJAG_00447","SJAG_00558","SJAG_02489","SJAG_04511","SJAG_00893","SJAG_03099","SJAG_00353","SJAG_04336","SJAG_04567","SJAG_03320","SJAG_04817","SJAG_01626","SJAG_00609","SJAG_06468","SJAG_00750","SJAG_01002","SJAG_02016","SJAG_04074","SJAG_01246","SJAG_03094","SJAG_05191","SJAG_04228","SJAG_02378","SJAG_01737","SJAG_04046","SJAG_02875","SJAG_01714","SJAG_01038","SJAG_04784","SJAG_04741","SJAG_02270","SJAG_04352","SJAG_00288","SJAG_01052","SJAG_03030","SJAG_03267","SJAG_00436","SJAG_03238","SJAG_00112","SJAG_03717","SJAG_02672","SJAG_03992","SJAG_02827","SJAG_02694","SJAG_02367","SJAG_00403","SJAG_01005","SJAG_01510","SJAG_01186","SJAG_05189","SJAG_02301","SJAG_05414","SJAG_02919","SJAG_03135","SJAG_03052","SJAG_03955","SJAG_01647","SJAG_03022","SJAG_04197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57669,58217,58476,58717,59276,59525,62134,64011,66694,68909,69242,69714,71491,71512,71594,74167,74348,74442,75293,76295,77139,77838,77859,77887,78254,78481,79589,79634,79679,79753,79847,80319,80773,81100,81356,81480,81492,81844,94259,95629,96821,97103,99624,100226,106213,110443,111344,111833,112683,114260,118176,118633,119791],"is_not":false,"summary":null,"term":"GO:0006457"},{"annotations":[76565,89244,100343,102497,106483,119487,119588,105515,81586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051083"},{"annotations":[91074,80276,97392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006458"},{"annotations":[96831,98913,100272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160203"},{"annotations":[61396,68630,66360,95261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007023"},{"annotations":[98126,104985,111803,111863,115495,104726,90382,94108,120268,73629,81505,94082,92659,97493,104902,107019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034975"},{"annotations":[76255,89677,77653,82021,73417,72499,73969,112770,79558,73289,100344,80705,104986,79756,76830,118571,104122,67663,74256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042026"}]},"cv_name":"biological_process","definition":"The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.","definition_xrefs":["GOC:go_curators","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":102,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00196":null,"SJAG_00288":null,"SJAG_00353":null,"SJAG_00403":null,"SJAG_00436":null,"SJAG_00447":null,"SJAG_00505":null,"SJAG_00524":null,"SJAG_00558":null,"SJAG_00564":null,"SJAG_00574":null,"SJAG_00609":null,"SJAG_00750":null,"SJAG_00753":null,"SJAG_00790":null,"SJAG_00893":null,"SJAG_00954":null,"SJAG_00983":null,"SJAG_01002":null,"SJAG_01005":null,"SJAG_01038":null,"SJAG_01052":null,"SJAG_01121":null,"SJAG_01160":null,"SJAG_01186":null,"SJAG_01246":null,"SJAG_01510":null,"SJAG_01526":null,"SJAG_01545":null,"SJAG_01615":null,"SJAG_01626":null,"SJAG_01647":null,"SJAG_01664":null,"SJAG_01684":null,"SJAG_01714":null,"SJAG_01737":null,"SJAG_01747":null,"SJAG_01874":null,"SJAG_01914":null,"SJAG_02014":null,"SJAG_02016":null,"SJAG_02032":null,"SJAG_02270":null,"SJAG_02301":null,"SJAG_02367":null,"SJAG_02378":null,"SJAG_02413":null,"SJAG_02461":null,"SJAG_02489":null,"SJAG_02672":null,"SJAG_02694":null,"SJAG_02825":null,"SJAG_02827":null,"SJAG_02875":null,"SJAG_02919":null,"SJAG_02926":null,"SJAG_03022":null,"SJAG_03030":null,"SJAG_03052":null,"SJAG_03094":null,"SJAG_03099":null,"SJAG_03135":null,"SJAG_03166":null,"SJAG_03237":null,"SJAG_03238":null,"SJAG_03267":null,"SJAG_03320":null,"SJAG_03414":null,"SJAG_03463":null,"SJAG_03570":null,"SJAG_03601":null,"SJAG_03717":null,"SJAG_03784":null,"SJAG_03794":null,"SJAG_03815":null,"SJAG_03955":null,"SJAG_03992":null,"SJAG_04012":null,"SJAG_04014":null,"SJAG_04046":null,"SJAG_04055":null,"SJAG_04074":null,"SJAG_04121":null,"SJAG_04155":null,"SJAG_04187":null,"SJAG_04197":null,"SJAG_04228":null,"SJAG_04336":null,"SJAG_04352":null,"SJAG_04371":null,"SJAG_04511":null,"SJAG_04518":null,"SJAG_04567":null,"SJAG_04741":null,"SJAG_04784":null,"SJAG_04817":null,"SJAG_05189":null,"SJAG_05191":null,"SJAG_05206":null,"SJAG_05414":null,"SJAG_06468":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"protein folding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-390466","Reactome:R-HSA-532668","GO:0007024","GO:0007025","Reactome:R-HSA-389960","Wikipedia:Protein_folding","GO:0007022"],"synonyms":[{"name":"alpha-tubulin folding","type":"narrow"},{"name":"beta-tubulin folding","type":"narrow"},{"name":"chaperone activity","type":"related"},{"name":"chaperonin ATPase activity","type":"related"},{"name":"chaperonin-mediated tubulin folding","type":"narrow"},{"name":"co-chaperone activity","type":"related"},{"name":"co-chaperonin activity","type":"related"},{"name":"glycoprotein-specific chaperone activity","type":"related"},{"name":"non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"protein complex assembly, multichaperone pathway","type":"related"}],"termid":"GO:0006457","terms_by_termid":{"GO:0006457":null,"GO:0006458":null,"GO:0007023":null,"GO:0034975":null,"GO:0042026":null,"GO:0051083":null,"GO:0160203":null}}


id: PBO:0071006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 8","termid":"PBO:0071006"}


id: GO:0120331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endothelial tube.","definition_xrefs":["GOC:sl","PMID:23239824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube formation","termid":"GO:0120331"}


id: GO:0033275
data:
  {"annotated_genes":["SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119488],"is_not":false,"summary":null,"term":"GO:0033275"}]},"cv_name":"biological_process","definition":"The sliding movement of actin thin filaments and myosin thick filaments past each other.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-myosin filament sliding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament sliding","type":"related"}],"termid":"GO:0033275","terms_by_termid":{"GO:0033275":null}}


id: MONDO:0019853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Thyroid dysgenesis is a type of primary congenital hypothyroidism, a permanent thyroid hormone deficiency that is present from birth.","definition_xrefs":["Orphanet:95711"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital hypothyroidism due to developmental anomaly (obsolete MONDO:0019853)","synonyms":[{"name":"primary congenital hypothyroidism due to developmental anomaly","type":"exact"}],"termid":"MONDO:0019853","xrefs":{"Monarch":{"xref_id":"0019853"}}}


id: MONDO:0011790
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87308],"is_not":false,"summary":null,"term":"MONDO:0011790"}]},"cv_name":"mondo","definition":"Amish lethal microcephaly is a very rare syndrome characterized by extreme microcephaly and early death, within the first year.","definition_xrefs":["Orphanet:99742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine-responsive dysfunction syndrome","termid":"MONDO:0000152"},{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005066"],"is_obsolete":false,"name":"Amish lethal microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:375938","UMLS:C1846648","GARD:8606","OMIM:607196","MESH:C538247","SCTID:702437000"],"synonyms":[{"name":"Amish lethal microcephaly","type":"exact"},{"name":"MCPHA","type":"related"},{"name":"microcephaly, Amish type","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 3 (microcephaly type)","type":"related"}],"termid":"MONDO:0011790","terms_by_termid":{"MONDO:0011790":null},"xrefs":{"Monarch":{"xref_id":"0011790"}}}


id: PBO:0055851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1B","termid":"PBO:0055851"}


id: PBO:0074427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 27","termid":"PBO:0074427"}


id: PBO:0091427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase","termid":"PBO:0091427"}


id: PBO:0034712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein Crd1 (predicted)","termid":"PBO:0034712"}


id: GO:0031890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"VIP receptor binding","type":"exact"},{"name":"vasoactive intestinal polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031890"}


id: PBO:0062994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C and casein kinase substrate in neurons 3","termid":"PBO:0062994"}


id: SO:0001939
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 12th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K12_acetylation_site","synonyms":[{"name":"H4K12 acetylation site","type":"exact"},{"name":"H4K12ac","type":"exact"}],"termid":"SO:0001939"}


id: PBO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta catalytic subunit Rev3 (predicted)","termid":"PBO:0001900"}


id: PBO:0090792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein Pab2","termid":"PBO:0090792"}


id: PBO:0052501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 13","termid":"PBO:0052501"}


id: PBO:0040521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZGP1 pseudogene 1","termid":"PBO:0040521"}


id: MONDO:0021373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the parietal lobe.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of parietal lobe","secondary_identifiers":["NCIT:C5573","MEDGEN:266073","SCTID:126956001","UMLS:C1263888"],"synonyms":[{"name":"neoplasm of parietal lobe","type":"exact"},{"name":"neoplasm of the parietal lobe","type":"exact"},{"name":"parietal lobe neoplasm","type":"exact"},{"name":"parietal lobe neoplasm (disease)","type":"exact"},{"name":"parietal lobe tumor","type":"exact"},{"name":"parietal lobe tumour","type":"exact"},{"name":"tumor of parietal lobe","type":"exact"},{"name":"tumor of the parietal lobe","type":"exact"},{"name":"tumour of parietal lobe","type":"exact"},{"name":"tumour of the parietal lobe","type":"exact"}],"termid":"MONDO:0021373","xrefs":{"Monarch":{"xref_id":"0021373"}}}


id: MONDO:0010370
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88795],"is_not":false,"summary":null,"term":"MONDO:0010370"}]},"cv_name":"mondo","definition":"An X-linked inherited form of Cornelia De Lange syndrome caused by mutations in the SMC1A gene mapped to chromosome Xp11.22. Patients have a milder form of the syndrome compared to patients with the NIPBL gene mutation.","definition_xrefs":["NCIT:C75485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:315658","OMIM:300590","UMLS:C1802395","DOID:0080506","GARD:15259"],"synonyms":[{"name":"CDLS2","type":"related"},{"name":"Cdls, X-linked","type":"related"},{"name":"Cornelia DE Lange syndrome 2","type":"related"},{"name":"Cornelia De Lange syndrome type 2","type":"exact"},{"name":"Cornelia De Lange syndrome, X-linked","type":"related"},{"name":"Cornelia de Lange syndrome 2","type":"exact"},{"name":"Cornelia de Lange syndrome 2, X-linked dominant","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in SMC1A","type":"exact"},{"name":"SMC1A Cornelia de Lange syndrome","type":"exact"},{"name":"X-linked Cornelia De Lange syndrome","type":"exact"}],"termid":"MONDO:0010370","terms_by_termid":{"MONDO:0010370":null},"xrefs":{"Monarch":{"xref_id":"0010370"}}}


id: FYPO:0003841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1902967","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle","termid":"FYPO:0002825"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone","type":"exact"},{"name":"decreased protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle midzone during mitosis","type":"exact"},{"name":"decreased protein localization to spindle midzone during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone","type":"exact"}],"termid":"FYPO:0003841"}


id: PBO:0060851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 2","termid":"PBO:0060851"}


id: GO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetylarylalkylamine = acetate + arylalkylamine.","definition_xrefs":["EC:3.5.1.76","MetaCyc:3.5.1.76-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"arylalkyl acylamidase activity","secondary_identifiers":["RHEA:10352"],"synonyms":[{"name":"N-acetylarylalkylamine amidohydrolase activity","type":"related"},{"name":"aralkyl acylamidase activity","type":"related"}],"termid":"GO:0047416"}


id: FYPO:0004434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide. Cells stop growing (and may die) at a concentration of 4-amino-1-methyl-1H-imidazole-5-carboselenoamide that allows wild type cells to grow.","definition_xrefs":["PMID:18204818","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide","synonyms":[{"name":"hypersensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide","type":"exact"},{"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide during vegetative growth","type":"exact"}],"termid":"FYPO:0004434"}


id: MONDO:0015090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of pure hereditary spastic paraplegia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive pure spastic paraplegia (obsolete MONDO:0015090)","secondary_identifiers":["Orphanet:100982"],"synonyms":[{"name":"autosomal recessive pure HSP","type":"exact"},{"name":"autosomal recessive pure SPG","type":"exact"},{"name":"autosomal recessive pure hereditary spastic paraplegia","type":"exact"},{"name":"autosomal recessive uncomplicated HSP","type":"exact"},{"name":"autosomal recessive uncomplicated SPG","type":"exact"},{"name":"autosomal recessive uncomplicated spastic paraplegia","type":"exact"},{"name":"pure hereditary spastic paraplegia, autosomal recessive","type":"exact"}],"termid":"MONDO:0015090","xrefs":{"Monarch":{"xref_id":"0015090"}}}


id: PBO:0029079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029079"}


id: PBO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"false positive GPI anchored protein pediction","termid":"PBO:0001203"}


id: PBO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 17","termid":"PBO:0062174"}


id: MONDO:0045033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that arises from infection in an immunologically compromised host and is systemic.","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"},{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opportunistic systemic mycosis","termid":"MONDO:0045033","xrefs":{"Monarch":{"xref_id":"0045033"}}}


id: PBO:0044497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYFIP related Rac1 interactor A","termid":"PBO:0044497"}


id: GO:0010765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sodium ion transport","termid":"GO:0010765"}


id: GO:0021880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","PMID:16226447","GOC:dgh","GOC:dph","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete Notch signaling pathway involved in forebrain neuron fate commitment (obsolete GO:0021880)","synonyms":[{"name":"Notch signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0021880"}


id: GO:1901471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of syringal lignin catabolic process","termid":"GO:1901469"},{"relation_name":"positively_regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of syringal lignin catabolic process","synonyms":[{"name":"activation of S-lignin catabolic process","type":"exact"},{"name":"activation of syringal lignin breakdown","type":"exact"},{"name":"activation of syringal lignin catabolic process","type":"narrow"},{"name":"activation of syringal lignin catabolism","type":"exact"},{"name":"activation of syringal lignin degradation","type":"exact"},{"name":"positive regulation of S-lignin catabolic process","type":"exact"},{"name":"positive regulation of syringal lignin breakdown","type":"exact"},{"name":"positive regulation of syringal lignin catabolism","type":"exact"},{"name":"positive regulation of syringal lignin degradation","type":"exact"},{"name":"up regulation of S-lignin catabolic process","type":"exact"},{"name":"up regulation of syringal lignin breakdown","type":"exact"},{"name":"up regulation of syringal lignin catabolic process","type":"exact"},{"name":"up regulation of syringal lignin catabolism","type":"exact"},{"name":"up regulation of syringal lignin degradation","type":"exact"},{"name":"up-regulation of S-lignin catabolic process","type":"exact"},{"name":"up-regulation of syringal lignin breakdown","type":"exact"},{"name":"up-regulation of syringal lignin catabolic process","type":"exact"},{"name":"up-regulation of syringal lignin catabolism","type":"exact"},{"name":"up-regulation of syringal lignin degradation","type":"exact"},{"name":"upregulation of S-lignin catabolic process","type":"exact"},{"name":"upregulation of syringal lignin breakdown","type":"exact"},{"name":"upregulation of syringal lignin catabolic process","type":"exact"},{"name":"upregulation of syringal lignin catabolism","type":"exact"},{"name":"upregulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901471"}


id: PBO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg-Like ATPase (predicted)","termid":"PBO:0002320"}


id: GO:0031157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","GOC:pg","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregation involved in sorocarp development","termid":"GO:0060176"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"regulation of aggregation during fruiting body biosynthesis","type":"related"},{"name":"regulation of aggregation during fruiting body formation","type":"related"}],"termid":"GO:0031157"}


id: MONDO:0044999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the scalp.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete scalp disorder (obsolete MONDO:0044999)","secondary_identifiers":["SCTID:238922006"],"synonyms":[{"name":"disease of scalp","type":"exact"},{"name":"disease or disorder of scalp","type":"exact"},{"name":"disorder of scalp","type":"exact"},{"name":"scalp disease","type":"exact"},{"name":"scalp disease or disorder","type":"exact"}],"termid":"MONDO:0044999","xrefs":{"Monarch":{"xref_id":"0044999"}}}


id: MONDO:0975746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 92, autosomal recessive","secondary_identifiers":["OMIM:620911"],"termid":"MONDO:0975746","xrefs":{"Monarch":{"xref_id":"0975746"}}}


id: MONDO:0021016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease caused by disturbed function of ion channel subunits or the proteins that regulate them.","definition_xrefs":["Wikipedia:Channelopathy"],"gene_count":0,"genotype_count":0,"name":"obsolete channelopathy (obsolete MONDO:0021016)","secondary_identifiers":["MESH:D053447"],"synonyms":[{"name":"disorder of ion channel activity","type":"exact"},{"name":"ion channel activity disease","type":"exact"}],"termid":"MONDO:0021016","xrefs":{"Monarch":{"xref_id":"0021016"}}}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:dph","GOC:lm","GOC:ef","GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: PBO:0026980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane","termid":"PBO:0026980"}


id: PBO:0088542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec22","termid":"PBO:0088542"}


id: PR:G2TRS1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.20","synonyms":[{"name":"Spom972h-new14","type":"exact"}],"termid":"PR:G2TRS1"}


id: FYPO:0002117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified transporter activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000138","FYPO:0002114"],"is_obsolete":false,"name":"abolished transporter activity","synonyms":[{"name":"transporter activity abolished","type":"exact"}],"termid":"FYPO:0002117"}


id: MONDO:0003237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid, benign neoplasm that arises from the uterine corpus. It is characterized by the presence of benign epithelial glands embedded in benign fibromyomatous tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"adenomyoma","termid":"MONDO:0005635"},{"relation_name":"is_a","term_name":"benign neoplasm of corpus uteri","termid":"MONDO:0021525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomyoma of uterine corpus","secondary_identifiers":["DOID:4994","UMLS:C1336903","MEDGEN:234465","NCIT:C6338"],"synonyms":[{"name":"adenomyoma of body of uterus","type":"exact"},{"name":"adenomyoma of corpus uteri","type":"exact"},{"name":"adenomyoma of the body of uterus","type":"exact"},{"name":"adenomyoma of the corpus uteri","type":"exact"},{"name":"adenomyoma of the uterine body","type":"exact"},{"name":"adenomyoma of the uterine corpus","type":"exact"},{"name":"adenomyoma of uterine body","type":"exact"},{"name":"adenomyoma of uterine corpus","type":"exact"},{"name":"body of uterus adenomyoma","type":"exact"},{"name":"corpus uteri adenomyoma","type":"exact"},{"name":"uterine body adenomyoma","type":"exact"},{"name":"uterine corpus adenomyoma","type":"exact"}],"termid":"MONDO:0003237","xrefs":{"Monarch":{"xref_id":"0003237"}}}


id: GO:0050359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + tropomyosin = ADP + O-phosphotropomyosin.","definition_xrefs":["MetaCyc:TROPOMYOSIN-KINASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete tropomyosin kinase activity (obsolete GO:0050359)","synonyms":[{"name":"ATP:tropomyosin O-phosphotransferase activity","type":"related"},{"name":"STK","type":"related"},{"name":"tropomyosin kinase (phosphorylating) activity","type":"related"}],"termid":"GO:0050359"}


id: GO:0102911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (-)-secoisolariciresinol + NAD = H+ + (-)-lactol + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secoisolariciresinol dehydrogenase activity (obsolete GO:0102911)","termid":"GO:0102911"}


id: GO:0019115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzaldehyde + NAD(P)+ + H2O = benzoate + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzaldehyde dehydrogenase [NAD(P)+] activity (obsolete GO:0019115)","termid":"GO:0019115"}


id: GO:0048190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the wing disc, a precursor to the adult wing.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation, imaginal disc","termid":"GO:0007450"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc dorsal/ventral pattern formation","synonyms":[{"name":"wing disc dorsal-ventral pattern formation","type":"exact"},{"name":"wing disc dorsoventral pattern formation","type":"exact"}],"termid":"GO:0048190"}


id: GO:0010513
data:
  {"annotated_genes":["SJAG_02613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:vw","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"positively_regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010513","terms_by_termid":{"GO:1902648":null}}


id: GO:0031688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A2B adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"A2B adenosine receptor binding","synonyms":[{"name":"A2B adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031688"}


id: PBO:0053692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 887","termid":"PBO:0053692"}


id: MONDO:0018299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sphingolipidosis with epilepsy (obsolete MONDO:0018299)","secondary_identifiers":["Orphanet:371442"],"termid":"MONDO:0018299","xrefs":{"Monarch":{"xref_id":"0018299"}}}


id: PBO:0081613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 541","termid":"PBO:0081613"}


id: PBO:0049932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietically expressed homeobox","termid":"PBO:0049932"}


id: GO:1904820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","PMID:15840053","GO_REF:0000094","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous membrane development","termid":"GO:1904817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peritoneum development","synonyms":[{"name":"peritonaeum development","type":"related"}],"termid":"GO:1904820"}


id: GO:0042273
data:
  {"annotated_genes":["SJAG_02894","SJAG_02475","SJAG_02759","SJAG_03789","SJAG_04308","SJAG_00479","SJAG_01339","SJAG_04346","SJAG_01551","SJAG_00390","SJAG_04414","SJAG_02427","SJAG_04289","SJAG_00271","SJAG_00231","SJAG_04395","SJAG_01454","SJAG_01621","SJAG_03012","SJAG_01821","SJAG_03971","SJAG_02891","SJAG_01839","SJAG_04180","SJAG_00932","SJAG_04108","SJAG_02374","SJAG_01161","SJAG_00537","SJAG_02952","SJAG_01811","SJAG_02890","SJAG_01364","SJAG_00722","SJAG_04669","SJAG_04304","SJAG_03425","SJAG_02754","SJAG_01813","SJAG_05223","SJAG_00659","SJAG_03413","SJAG_02830","SJAG_03658","SJAG_01365","SJAG_01122","SJAG_02840","SJAG_00752","SJAG_05190","SJAG_01494","SJAG_01581","SJAG_00689","SJAG_00949","SJAG_03458","SJAG_04890","SJAG_04004","SJAG_02436","SJAG_04919","SJAG_03466","SJAG_01954","SJAG_04492","SJAG_05679","SJAG_04066","SJAG_01366","SJAG_02417","SJAG_03697","SJAG_03080","SJAG_02644","SJAG_02508","SJAG_01568","SJAG_01420","SJAG_04940","SJAG_02535","SJAG_00166","SJAG_04562","SJAG_04992","SJAG_03773","SJAG_03155","SJAG_03713","SJAG_02868","SJAG_00882","SJAG_00323","SJAG_02275","SJAG_00921","SJAG_02745","SJAG_01752","SJAG_04599","SJAG_04330","SJAG_00749","SJAG_05248","SJAG_03905","SJAG_03496","SJAG_01606"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63711,71837,71975,71995,73723,74493,74552,75906,76815,77756,78431,78531,78825,78839,79192,79989,81860,92132,102268,104706,105192,108784,109987,117954,118395,120784],"is_not":false,"summary":null,"term":"GO:0042273"},{"annotations":[58001,102522,105301,107810,112636,81178,110828,102382,94578,117618,118494,109251,99758,91399,114737,100960,117619,57354,94159,102189,120767,113974,104318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[105910,93472,96740,73209],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[105847,118418,99759,104319,105927,112562,106079,118419,106608,112563,93870,98846,96617,89419,101244,107022],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180023"},{"annotations":[81181,76905,74137,77086,80635,73333,81062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000470"},{"annotations":[80424,81445,72918,74004,75188,99761,75737,76929,72048,76527,62413,73978,101837,79906,75368,99728,75024,77600],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000463"},{"annotations":[109009,113823,110202,103079],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902775"},{"annotations":[74091,67276,73812,92808,92809,74433,64903,72795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000027"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a large ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00231":null,"SJAG_00271":null,"SJAG_00323":null,"SJAG_00390":null,"SJAG_00479":null,"SJAG_00537":null,"SJAG_00659":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_00921":null,"SJAG_00932":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01366":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01551":null,"SJAG_01568":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01621":null,"SJAG_01752":null,"SJAG_01811":null,"SJAG_01813":null,"SJAG_01821":null,"SJAG_01839":null,"SJAG_01954":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02475":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02644":null,"SJAG_02745":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_02894":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03155":null,"SJAG_03413":null,"SJAG_03425":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03658":null,"SJAG_03697":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03789":null,"SJAG_03905":null,"SJAG_03971":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04180":null,"SJAG_04289":null,"SJAG_04304":null,"SJAG_04308":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04562":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04890":null,"SJAG_04919":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05190":null,"SJAG_05223":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ribosomal large subunit biogenesis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"ribosomal large subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042273","terms_by_termid":{"GO:0000027":null,"GO:0000448":null,"GO:0000463":null,"GO:0000470":null,"GO:0042273":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: MONDO:0014514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the MFAP5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 9","secondary_identifiers":["OMIM:616166","UMLS:C4015368","MEDGEN:863805","GARD:16067"],"synonyms":[{"name":"AAT9","type":"related"},{"name":"MFAP5 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 9","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 9","type":"exact"},{"name":"aortic aneurysm, thoracic, with or without aortic dissection","type":"related"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in MFAP5","type":"exact"}],"termid":"MONDO:0014514","xrefs":{"Monarch":{"xref_id":"0014514"}}}


id: PBO:0089224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, Atf-CREB family Atf21","termid":"PBO:0089224"}


id: GO:0031028
data:
  {"annotated_genes":["SJAG_03342","SJAG_04468","SJAG_00229","SJAG_03508","SJAG_06270","SJAG_04455","SJAG_02514","SJAG_03376","SJAG_04776","SJAG_01464","SJAG_02169","SJAG_03936","SJAG_00600","SJAG_03353","SJAG_02232","SJAG_00526","SJAG_00078","SJAG_04597","SJAG_03048","SJAG_04943","SJAG_01188","SJAG_01386","SJAG_03592","SJAG_01790","SJAG_00082","SJAG_03631","SJAG_03681","SJAG_01805","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75976,91015,96193,102735,108197,108955],"is_not":false,"summary":null,"term":"GO:0031028"},{"annotations":[117744,111993,109044,93508,74589,106847,95230,94616,97419,92496,109354,103065,101375,94701,108911],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[95583,89297,104183,112352,91775],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[91737,106300,115204],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031029"}]},"cv_name":"biological_process","definition":"The series of molecular signals, mediated by the small GTPase Ras, that results in the initiation of contraction of the contractile ring, at the beginning of cytokinesis and cell division by septum formation. The pathway coordinates chromosome segregation with mitotic exit and cytokinesis.","definition_xrefs":["GOC:mah","GOC:vw","PMID:16775007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"septation initiation signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SIN","type":"exact"},{"name":"septation initiation network","type":"exact"},{"name":"septation initiation signaling cascade","type":"related"},{"name":"septation initiation signalling","type":"exact"}],"termid":"GO:0031028","terms_by_termid":{"GO:0031028":null,"GO:0031029":null,"GO:0031030":null,"GO:0031031":null}}


id: PBO:0038980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylserine hydrolase","termid":"PBO:0038980"}


id: PBO:0057016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 105-1","termid":"PBO:0057016"}


id: GO:0019374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"galactolipid metabolic process","synonyms":[{"name":"galactolipid metabolism","type":"exact"}],"termid":"GO:0019374"}


id: PBO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ras1","termid":"PBO:0001288"}


id: MONDO:1010419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, domestic cat","secondary_identifiers":["OMIA:000703-9685"],"termid":"MONDO:1010419","xrefs":{"Monarch":{"xref_id":"1010419"}}}


id: GO:0061598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction ATP + molybdopterin = diphosphate + adenylyl-molybdopterin.","definition_xrefs":["GOC:dph","EC:2.7.7.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"molybdopterin adenylyltransferase activity","secondary_identifiers":["RHEA:31331"],"termid":"GO:0061598"}


id: PBO:0083196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene HIR3; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083196"}


id: MONDO:0014333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral perisylvian polymicrogyria","termid":"MONDO:0020340"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"polymicrogyria, bilateral perisylvian, autosomal recessive","secondary_identifiers":["MEDGEN:816735","UMLS:C3810405","GARD:16009","OMIM:615752"],"synonyms":[{"name":"BPPR","type":"related"},{"name":"Pmgr","type":"related"},{"name":"polymicrogyria, bilateral perisylvian","type":"exact"},{"name":"polymicrogyria, bilateral perisylvian, autosomal recessive","type":"exact"}],"termid":"MONDO:0014333","xrefs":{"Monarch":{"xref_id":"0014333"}}}


id: FYPO:0002277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001283"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"},{"relation_name":"is_a","term_name":"abnormal protein degradation during nitrogen starvation","termid":"FYPO:0002796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein degradation during nitrogen starvation","synonyms":[{"name":"increased protein breakdown during nitrogen starvation","type":"exact"},{"name":"increased protein catabolic process during nitrogen starvation","type":"exact"},{"name":"increased protein catabolism during nitrogen starvation","type":"exact"},{"name":"increased protein degradation during nitrogen depletion","type":"exact"},{"name":"increased protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002277"}


id: PBO:0090446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase, prune Ppx1","termid":"PBO:0090446"}


id: _global:has_severity
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed severity in a cell. Can also be used to capture expressivity, i.e. the extent to which a phenotype is expressed in an individual.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_severity","synonyms":[{"name":"has_expressivity","type":"exact"}],"termid":"_global:has_severity"}


id: PBO:0049103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 160","termid":"PBO:0049103"}


id: GO:0050252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + retinol = CoA + retinyl ester.","definition_xrefs":["EC:2.3.1.76","MetaCyc:RETINOL-O-FATTY-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"retinol O-fatty-acyltransferase activity","secondary_identifiers":["Reactome:R-HSA-8848585","RHEA:11488","Reactome:R-HSA-2465919"],"synonyms":[{"name":"acyl-CoA:retinol O-acyltransferase activity","type":"related"},{"name":"retinol acyltransferase activity","type":"related"},{"name":"retinol fatty-acyltransferase activity","type":"related"}],"termid":"GO:0050252"}


id: FYPO:0008116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphoglycerate mutase activity is decreased.","definition_xrefs":["PMID:11106417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased phosphoglycerate mutase activity","termid":"FYPO:0008116"}


id: PR:Q9P7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr3 gene.","definition_xrefs":["UniProtKB:Q9P7S3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.10c","synonyms":[{"name":"Spom972h-ssr3","type":"exact"}],"termid":"PR:Q9P7S3"}


id: MONDO:0009349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most severe form of holoprosencephaly in which there is a complete absence of midline forebrain division resulting in the presence of fused hemispheres and a single ventricle (alobar holoprosencephaly). It is mapped to chromosome 21q22.","definition_xrefs":["NCIT:C75476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 1","secondary_identifiers":["OMIM:236100","DOID:0110881","UMLS:C0266667","MEDGEN:78617"],"synonyms":[{"name":"Demyer sequence","type":"related"},{"name":"HPE1","type":"exact"},{"name":"Hpe, familial","type":"broad"},{"name":"arhinencephaly","type":"related"},{"name":"cyclopia","type":"broad"},{"name":"holoprosencephaly 1","type":"exact"},{"name":"holoprosencephaly 1, isolated cases","type":"exact"},{"name":"holoprosencephaly type 1","type":"exact"},{"name":"holoprosencephaly, familial Alobar","type":"related"},{"name":"isolated arhinencephaly","type":"related"}],"termid":"MONDO:0009349","xrefs":{"Monarch":{"xref_id":"0009349"}}}


id: PBO:0056784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 1 pseudogene 1","termid":"PBO:0056784"}


id: MONDO:0019305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune deficiency with skin involvement (obsolete MONDO:0019305)","secondary_identifiers":["Orphanet:79391"],"termid":"MONDO:0019305","xrefs":{"Monarch":{"xref_id":"0019305"}}}


id: FYPO:0006785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cobalt ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cobalt","synonyms":[{"name":"normal cell population growth in presence of cobalt","type":"exact"},{"name":"normal cell population growth on cobalt","type":"exact"},{"name":"normal cell population growth on cobalt ion","type":"exact"},{"name":"normal cellular response to cobalt","type":"related"},{"name":"normal growth on cobalt ions","type":"exact"},{"name":"normal vegetative cell population growth on cobalt","type":"exact"}],"termid":"FYPO:0006785"}


id: MONDO:0044302
data:
  {"annotated_genes":["SJAG_03967"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88630],"is_not":false,"summary":null,"term":"MONDO:0044302"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03967":null},"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects, dysmorphic facial features, and intellectual developmental disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112247","Orphanet:646278","UMLS:C4479246","OMIM:617360","MEDGEN:1385307"],"synonyms":[{"name":"CDK13-related congenital heart defects-intellectual disability-facial dysmorphism syndrome","type":"exact"},{"name":"CHDFIDD","type":"related"},{"name":"congenital heart defects, dysmorphic FACIAL features, and intellectual developmental disorder","type":"related"}],"termid":"MONDO:0044302","terms_by_termid":{"MONDO:0044302":null},"xrefs":{"Monarch":{"xref_id":"0044302"}}}


id: FYPO:0005184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 5 the C-terminal domain of RNA polymerase II occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","GO:0071620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","synonyms":[{"name":"increased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during mitotic cell cycle","type":"related"},{"name":"increased phosphorylation of RNA polymerase II CTD serine 5 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0005184"}


id: PBO:0058418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4787","termid":"PBO:0058418"}


id: PBO:0084402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine methyltransferase; involved in the monomethylation of eEF1A (Tef1p/Tef2p); SET-domain family member; predicted involvement in ribosome biogenesis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0084402"}


id: PBO:0069177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 431, pseudogene","termid":"PBO:0069177"}


id: MONDO:0032876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with absent language and variable seizures","secondary_identifiers":["UMLS:C5231469","MEDGEN:1684803","OMIM:618707"],"synonyms":[{"name":"Ito-Raymond Syndrome","type":"related"},{"name":"NEDALVS","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH ABSENT LANGUAGE AND VARIABLE SEIZURES","type":"related"}],"termid":"MONDO:0032876","xrefs":{"Monarch":{"xref_id":"0032876"}}}


id: GO:0004522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"ribonuclease A activity","secondary_identifiers":["Wikipedia:Ribonuclease_A"],"synonyms":[{"name":"RNase A activity","type":"related"},{"name":"RNase I activity","type":"related"},{"name":"RNase activity","type":"broad"},{"name":"S-genotype-assocd. glycoproteins","type":"related"},{"name":"SLSG glycoproteins","type":"related"},{"name":"alkaline ribonuclease activity","type":"exact"},{"name":"ceratitis capitata alkaline ribonuclease activity","type":"exact"},{"name":"endoribonuclease I","type":"related"},{"name":"gene S glycoproteins","type":"related"},{"name":"gene S locus-specific glycoproteins","type":"related"},{"name":"pancreatic RNase activity","type":"related"},{"name":"pancreatic ribonuclease activity","type":"narrow"},{"name":"ribonuclease I activity","type":"related"},{"name":"ribonucleate 3'-pyrimidino-oligonucleotidohydrolase activity","type":"exact"},{"name":"ribonucleic phosphatase activity","type":"exact"}],"termid":"GO:0004522"}


id: GO:0031134
data:
  {"annotated_genes":["SJAG_00335","SJAG_05220","SJAG_03543","SJAG_01837","SJAG_01371","SJAG_00678","SJAG_01211","SJAG_00302","SJAG_04412","SJAG_05266","SJAG_04259","SJAG_00082","SJAG_00930","SJAG_02814","SJAG_02336","SJAG_03048","SJAG_04623","SJAG_03437","SJAG_01805","SJAG_04140","SJAG_00918","SJAG_01224","SJAG_02731","SJAG_05319","SJAG_01082","SJAG_01775","SJAG_02451","SJAG_03989","SJAG_01297","SJAG_04076","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110963],"is_not":false,"summary":null,"term":"GO:0031134"},{"annotations":[110076,95971,115066,109319,111715,110705,115935,91520,104233,105340,79676,64562,100406,114457,90913,92750,105692,116339,100906,102311,114458,91134,95607,118761,120559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990758"},{"annotations":[91773,95581,104179,113033,118522],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatids establish stable attachments to microtubules emanating from opposite spindle poles.","definition_xrefs":["PMID:15309047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"part_of","term_name":"sister chromatid segregation","termid":"GO:0000819"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03437":null,"SJAG_03543":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sister chromatid biorientation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"chromosome biorientation","type":"exact"},{"name":"sister kinetochore biorientation","type":"exact"}],"termid":"GO:0031134","terms_by_termid":{"GO:0031134":null,"GO:0140429":null,"GO:1990758":null}}


id: FYPO:0001795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing purvalanol A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on purvalanol A","synonyms":[{"name":"normal cell population growth in presence of purvalanol A","type":"exact"},{"name":"normal cell population growth on purvalanol A","type":"exact"},{"name":"normal cellular response to purvalanol A","type":"related"},{"name":"normal vegetative cell population growth on purvalanol A","type":"exact"}],"termid":"FYPO:0001795"}


id: MONDO:0700297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"homocystinuria without methylmalonic aciduria","termid":"MONDO:0018964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004736","MONDO:0006025","MONDO:0002280","MONDO:0005066"],"is_obsolete":false,"name":"homocystinuria-megaloblastic anemia cblD type","secondary_identifiers":["OMIM:620952"],"termid":"MONDO:0700297","xrefs":{"Monarch":{"xref_id":"0700297"}}}


id: PBO:0059144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryocyte and platelet inhibitory receptor G6b","termid":"PBO:0059144"}


id: PR:O74799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exg3 gene.","definition_xrefs":["UniProtKB:O74799","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,3-beta-glucosidase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.05","synonyms":[{"name":"Exo-1,3-beta-glucanase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-exg3","type":"exact"}],"termid":"PR:O74799"}


id: MONDO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Abnormally high level of estrogen.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperestrogenism (obsolete MONDO:0001946)","secondary_identifiers":["SCTID:37295009","ICD10WHO:E28.0","ICD9:256.0","DOID:14336","ICD10CM:E28.0","NANDO:2200379"],"synonyms":[{"name":"estrogen Excess","type":"related"},{"name":"hyperestrogenism","type":"exact"}],"termid":"MONDO:0001946","xrefs":{"Monarch":{"xref_id":"0001946"}}}


id: PBO:0078479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 3-1","termid":"PBO:0078479"}


id: MONDO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of an organized, regular atrial rhythm with atrial rate between 101 and 240 beats per minute. The P wave morphology must be distinct from the sinus P wave morphology. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial tachycardia","secondary_identifiers":["ICD9:427.89","MEDGEN:107485","NCIT:C35481","SCTID:276796006","UMLS:C0546959","NANDO:2200218","EFO:0005308"],"termid":"MONDO:0005479","xrefs":{"Monarch":{"xref_id":"0005479"}}}


id: GO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete GP40-like receptor activity (obsolete GO:0001630)","synonyms":[{"name":"GP40-like receptor activity","type":"exact"}],"termid":"GO:0001630"}


id: PBO:0053932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1231","termid":"PBO:0053932"}


id: PBO:0056516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 2","termid":"PBO:0056516"}


id: GO:0016903
data:
  {"annotated_genes":["SJAG_00482","SJAG_03828","SJAG_03064","SJAG_03903","SJAG_00674","SJAG_02945","SJAG_03293","SJAG_02006","SJAG_06622","SJAG_02464","SJAG_00234","SJAG_00636","SJAG_06621","SJAG_01869","SJAG_03786","SJAG_02961","SJAG_00660","SJAG_00027","SJAG_02135","SJAG_00869","SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140087"},{"annotations":[80303,77733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"},{"annotations":[93591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051268"},{"annotations":[93592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051269"},{"annotations":[65433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004073"},{"annotations":[77884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004350"},{"annotations":[76373,82107,111224,111226,111225,74217,111221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"},{"annotations":[65922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004043"},{"annotations":[79818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003842"},{"annotations":[73106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003942"},{"annotations":[71908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004591"},{"annotations":[80797,74391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004739"},{"annotations":[77715,79238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[89203,90191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00482":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00674":null,"SJAG_00869":null,"SJAG_01869":null,"SJAG_02006":null,"SJAG_02135":null,"SJAG_02235":null,"SJAG_02464":null,"SJAG_02945":null,"SJAG_02961":null,"SJAG_03064":null,"SJAG_03293":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016903","terms_by_termid":{"GO:0003842":null,"GO:0003942":null,"GO:0004029":null,"GO:0004043":null,"GO:0004073":null,"GO:0004350":null,"GO:0004365":null,"GO:0004591":null,"GO:0004739":null,"GO:0004777":null,"GO:0036243":null,"GO:0051268":null,"GO:0051269":null,"GO:0140087":null}}


id: MONDO:0014533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the WWOX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 28","secondary_identifiers":["GARD:16069","OMIM:616211","DOID:0080452","MEDGEN:863956","UMLS:C4015519"],"synonyms":[{"name":"DEE28","type":"exact"},{"name":"EIEE28","type":"exact"},{"name":"WOREE syndrome","type":"exact"},{"name":"WWOX early infantile epileptic encephalopathy","type":"exact"},{"name":"WWOX-related epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 28","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in WWOX","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 28","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 28","type":"exact"}],"termid":"MONDO:0014533","xrefs":{"Monarch":{"xref_id":"0014533"}}}


id: GO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antibacterial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"negative regulation of defense response to bacterium","termid":"GO:1900425"},{"relation_name":"negatively_regulates","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antibacterial peptide production","synonyms":[{"name":"down regulation of antibacterial peptide production","type":"exact"},{"name":"down-regulation of antibacterial peptide production","type":"exact"},{"name":"downregulation of antibacterial peptide production","type":"exact"},{"name":"inhibition of antibacterial peptide production","type":"narrow"}],"termid":"GO:0002787"}


id: GO:0035977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of sugar residues from a glycosylated protein that contributes to the breakdown of a glycoprotein.","definition_xrefs":["GOC:vw","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation","termid":"GO:0006517"},{"relation_name":"part_of","term_name":"glycoprotein catabolic process","termid":"GO:0006516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein deglycosylation involved in glycoprotein catabolic process","termid":"GO:0035977"}


id: PBO:0057265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 490","termid":"PBO:0057265"}


id: MONDO:0018660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia is a genetic disorder characterized by spontaneous hemorrhage or prolonged bleeding due to factor VIII or IX deficiency.","definition_xrefs":["Orphanet:448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hemorrhagic disorder due to a constitutional coagulation factors defect (obsolete MONDO:0019039)","termid":"MONDO:0019039"},{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia","secondary_identifiers":["GARD:10418","UMLS:C0684275","NCIT:C3093","MedDRA:10061992","SCTID:90935002","MEDGEN:146334"],"synonyms":[{"name":"hemophilia","type":"exact"}],"termid":"MONDO:0018660","xrefs":{"Monarch":{"xref_id":"0018660"}}}


id: PBO:0080744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XIAP associated factor 1","termid":"PBO:0080744"}


id: GO:0034069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + N-acetylaminoglycoside.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside N-acetyltransferase activity","synonyms":[{"name":"kanamycin acetyltransferase activity","type":"narrow"}],"termid":"GO:0034069"}


id: FYPO:0007009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly by small RNA","termid":"FYPO:0000187"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased heterochromatin assembly by small RNA","synonyms":[{"name":"decreased RNAi-mediated chromatin silencing","type":"exact"},{"name":"decreased chromatin silencing by small RNA","type":"exact"},{"name":"decreased heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly by small RNA during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly by small RNA","type":"exact"}],"termid":"FYPO:0007009"}


id: PBO:0061903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor mu 1","termid":"PBO:0061903"}


id: PR:Q9Y7Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gst1 gene.","definition_xrefs":["UniProtKB:Q9Y7Q2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.09c","synonyms":[{"name":"GST-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gst1","type":"exact"}],"termid":"PR:Q9Y7Q2"}


id: PBO:0057722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-7","termid":"PBO:0057722"}


id: MONDO:0022070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild mental deficiency, short stature, macrocranium, cardiac anomalies, cutis laxa, peculiar facies, wrinkled palms and soles, small vertebral bodies","definition_xrefs":["GARD:0001083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cantu Sanchez-Corona Hernandez syndrome","termid":"MONDO:0022070","xrefs":{"Monarch":{"xref_id":"0022070"}}}


id: PBO:0005439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor A subunit Ssb3","termid":"PBO:0005439"}


id: MONDO:0022394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysplasia of cervix","termid":"MONDO:0006736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical intraepithelial neoplasia","secondary_identifiers":["SCTID:285636001","MEDGEN:60214","UMLS:C0206708","NCIT:C3782","GARD:9244"],"synonyms":[{"name":"Cervical Dysplasia","type":"related"},{"name":"Cervical Intraepithelial Neoplasia","type":"related"},{"name":"Cervical Intraepithelial Neoplasm","type":"related"},{"name":"Cervical Intraepithelial Neoplasms","type":"related"},{"name":"Cervical intraepithelial neoplasia","type":"related"},{"name":"Cervix Intraepithelial Neoplasia","type":"related"},{"name":"Cervix Uteri Intraepithelial Neoplasia","type":"related"},{"name":"Intraepithelial Neoplasia of Cervix","type":"related"},{"name":"Intraepithelial Neoplasia of Cervix Uteri","type":"related"},{"name":"Intraepithelial Neoplasia of Uterine Cervix","type":"related"},{"name":"Intraepithelial Neoplasia of the Cervix","type":"related"},{"name":"Intraepithelial Neoplasia of the Cervix Uteri","type":"related"},{"name":"Intraepithelial Neoplasia of the Uterine Cervix","type":"related"},{"name":"Intraepithelial Neoplasia, Cervical","type":"related"},{"name":"Intraepithelial Neoplasm, Cervical","type":"related"},{"name":"Intraepithelial Neoplasms, Cervical","type":"related"},{"name":"NEOPL CERVICAL INTRAEPITHELIAL","type":"related"},{"name":"Neoplasia, Cervical Intraepithelial","type":"related"},{"name":"Neoplasm, Cervical Intraepithelial","type":"related"},{"name":"Neoplasms, Cervical Intraepithelial","type":"related"},{"name":"Uterine Cervix Intraepithelial Neoplasia","type":"related"}],"termid":"MONDO:0022394","xrefs":{"Monarch":{"xref_id":"0022394"}}}


id: PBO:0085158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide exchange factor for Gsp1p; localizes to the nucleus, required for nucleocytoplasmic trafficking of macromolecules; suppressor of the pheromone response pathway; potentially phosphorylated by Cdc28p; human homolog of the RAN GEF, RCC1, can complement a temperature sensitive point mutant","termid":"PBO:0085158"}


id: PBO:0040658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 2","termid":"PBO:0040658"}


id: GO:0009039
data:
  {"annotated_genes":["SJAG_02766"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73345],"is_not":false,"summary":null,"term":"GO:0009039"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: urea + H2O = CO2 + 2 NH3.","definition_xrefs":["RHEA:20557","EC:3.5.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"urease activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["UM-BBD_reactionID:r0120","MetaCyc:UREASE-RXN"],"synonyms":[{"name":"urea amidohydrolase activity","type":"related"}],"termid":"GO:0009039","terms_by_termid":{"GO:0009039":null}}


id: PBO:0087598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; green fluorescent protein (GFP)-fusion protein localizes to the endosome","termid":"PBO:0087598"}


id: GO:0035404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a serine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-serine phosphorylation (obsolete GO:0035404)","synonyms":[{"name":"histone serine phosphorylation","type":"exact"}],"termid":"GO:0035404"}


id: MONDO:0016839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal 17p13.3 microdeletion syndrome is a rare partial monosomy of the short arm of chromosome 17 with a variable phenotype characterized by prenatal and postnatal growth retardation, developmental delay, mild intellectual disability, macrocephaly, mild facial dysmorphisms including prominent forehead, hypertelorism, thick upper and/or lower lip vermillion, and structural abnormalities of the brain variably including white matter abnormalities, prominent Virchow-Robin spaces, Chiari I malformation, corpus callosum hypoplasia, but no lissencephaly.","definition_xrefs":["Orphanet:261257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17p deletion","termid":"MONDO:0022754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 17p13.3 microdeletion syndrome","secondary_identifiers":["UMLS:C4707092","GARD:20776","SCTID:764696007","MEDGEN:1643975"],"synonyms":[{"name":"distal del(17)(p13.3)","type":"exact"},{"name":"distal monosomy 17p13.3","type":"exact"}],"termid":"MONDO:0016839","xrefs":{"Monarch":{"xref_id":"0016839"}}}


id: GO:0141217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranscriptional addition of a carbohydrate or carbohydrate derivative unit to residues in an RNA molecule.","definition_xrefs":["PMID:34004145","PMID:39173631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"glycosylation","termid":"GO:0070085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA glycosylation","synonyms":[{"name":"glycoRNA biosynthesis","type":"exact"}],"termid":"GO:0141217"}


id: MONDO:0004363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare spinal tumor which is highly malignant and tends to be locally invasive of surrounding neural tissue. The tumor also tends to spread throughout the neuroaxis and is often rapidly progressive. Histologically the tumors are highly cellular with nuclear and cellular pleomorphism, endothelial proliferation, mitotic figures, and, often, necrosis. This tumor has a relatively poor prognosis. Clinical features may include pain followed by rapidly progressive neurologic deficits such as extremity weakness, sensory changes, spasticity, and incontinence. (From Innocenzi et al., Clin Neurol Neurosurg 1997 Feb;99(1):1-5)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord glioma","termid":"MONDO:0002542"},{"relation_name":"is_a","term_name":"spinal cord glioma","termid":"MONDO:0002542"},{"relation_name":"is_a","term_name":"adult glioblastoma","termid":"MONDO:0020690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult spinal cord glioblastoma","secondary_identifiers":["SCTID:276829003","MEDGEN:107849","DOID:7806","UMLS:C0559185","NCIT:C27183"],"synonyms":[{"name":"adult spinal cord glioblastoma","type":"exact"},{"name":"adult spinal cord glioblastoma multiforme","type":"exact"},{"name":"glioblastoma multiforme of spinal cord","type":"exact"}],"termid":"MONDO:0004363","xrefs":{"Monarch":{"xref_id":"0004363"}}}


id: PBO:0061242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 3","termid":"PBO:0061242"}


id: GO:1905160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:617517"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Factor XII activation (obsolete GO:1905160)","synonyms":[{"name":"activation of Factor XII activation","type":"narrow"},{"name":"activation of Hageman factor activation","type":"narrow"},{"name":"positive regulation of Hageman factor activation","type":"exact"},{"name":"up regulation of Factor XII activation","type":"exact"},{"name":"up regulation of Hageman factor activation","type":"exact"},{"name":"up-regulation of Factor XII activation","type":"exact"},{"name":"up-regulation of Hageman factor activation","type":"exact"},{"name":"upregulation of Factor XII activation","type":"exact"},{"name":"upregulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905160"}


id: GO:1990114
data:
  {"annotated_genes":["SJAG_04093","SJAG_04531","SJAG_04012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80223,103991,119917],"is_not":false,"summary":null,"term":"GO:1990114"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase II core complex.","definition_xrefs":["GOC:rb","PMID:23459708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null,"SJAG_04531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"RNA polymerase II core complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, core complex assembly","type":"exact"},{"name":"RNA Polymerase II assembly","type":"broad"}],"termid":"GO:1990114","terms_by_termid":{"GO:1990114":null}}


id: GO:2000670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"is_a","term_name":"regulation of dendritic cell apoptotic process","termid":"GO:2000668"},{"relation_name":"positively_regulates","term_name":"dendritic cell apoptotic process","termid":"GO:0097048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell apoptotic process","synonyms":[{"name":"positive regulation of dendritic cell apoptosis","type":"narrow"}],"termid":"GO:2000670"}


id: PBO:0113469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1-stimulating GTPase and EGO/GSE complex; subunit of Gtr1-Gtr2 GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE vacuolar membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p; involved in phosphate transport, telomeric chromatin silencing and oxidative stress response; activated by Iml1p (GAP) subunit of SEACIT complex; targeted to vacuole via AP-3 pathway; similar to human RagA and RagB","termid":"PBO:0113469"}


id: GO:0089703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-aspartate out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"vacuolar amino acid transmembrane transport","termid":"GO:0034487"},{"relation_name":"is_a","term_name":"L-aspartate transmembrane transport","termid":"GO:0070778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-aspartate transmembrane export from vacuole","termid":"GO:0089703"}


id: PBO:0039932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 37","termid":"PBO:0039932"}


id: MONDO:0100254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive complex neurodevelopmental condition caused by variants in the CACNA1A gene. Phenotypic onset (usually) occurs around age 1 and most often includes intellectual disability but can also include epileptic encephalopathy, benign paroxysmal torticollis of infancy and paroxysmal tonic upgaze psychomotor delay, learning difficulties, absence epilepsy, episodic ataxia, and hemiplegic migraines.","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder with motor features","termid":"MONDO:0100516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"CACNA1A-related complex neurodevelopmental disorder","termid":"MONDO:0100254","xrefs":{"Monarch":{"xref_id":"0100254"}}}


id: PBO:0068328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF32 antisense RNA 1","termid":"PBO:0068328"}


id: PBO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1","termid":"PBO:0000926"}


id: PBO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uridine) methyltransferase Trm9 (predicted)","termid":"PBO:0001443"}


id: PBO:0005692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A (predicted)","termid":"PBO:0005692"}


id: PBO:0077263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 11, pseudogene","termid":"PBO:0077263"}


id: MONDO:0018637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive disease characterized by the buildup in the blood of fat particles called chylomicrons (chylomicronemia), severe hypertriglyceridemia, and the risk of recurrent and potentially fatal pancreatitis and other complications. It is caused by mutations in the gene encoding LPL or, less frequently, by mutations in genes encoding other proteins necessary for LPL function.","definition_xrefs":["PMID:22239554","PMID:25470695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial chylomicronemia syndrome","secondary_identifiers":["DOID:0111417","Orphanet:444490","MEDGEN:1778100","GARD:6414","UMLS:C5442313"],"termid":"MONDO:0018637","xrefs":{"Monarch":{"xref_id":"0018637"}}}


id: GO:0033929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-galactosidic linkages in blood group A and B substances.","definition_xrefs":["EC:3.2.1.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"blood-group-substance endo-1,4-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.102-RXN"],"synonyms":[{"name":"blood-group-substance 1,4-beta-D-galactanohydrolase activity","type":"related"},{"name":"endo-beta-galactosidase activity","type":"broad"}],"termid":"GO:0033929"}


id: PR:Q9C0W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-2 complex subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22780:SF4","OMA:SCHPO02859","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.03c","secondary_identifiers":["UniProtKB:Q9C0W7"],"synonyms":[{"name":"Spom972h-AP2A2","type":"exact"},{"name":"alpha-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 2 alpha large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large alpha chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0W7"}


id: MONDO:0012544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-syndactyly, Zhao type is a recently described syndrome associating a brachydactyly type A4 (short middle phalanges of the 2nd and 5th fingers and absence of middle phalanges of the 2nd to 5th toes) and a syndactyly of the 2nd and 3rd toes. Metacarpals and metatarsals anomalies are common.","definition_xrefs":["Orphanet:93409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-syndactyly syndrome","secondary_identifiers":["GARD:16821","MEDGEN:377836","MESH:C565193","DOID:0050689","UMLS:C1853137","OMIM:610713"],"synonyms":[{"name":"BDSD","type":"related"},{"name":"Bdsd","type":"related"},{"name":"brachydactyly-syndactyly syndrome","type":"exact"},{"name":"brachydactyly-syndactyly, Zhao type","type":"related"},{"name":"brachydactyly-syndactyly-oligodactyly syndrome","type":"related"}],"termid":"MONDO:0012544","xrefs":{"Monarch":{"xref_id":"0012544"}}}


id: PBO:0026710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_MCM_complex_binding","termid":"PBO:0026710"}


id: PBO:0064196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 4","termid":"PBO:0064196"}


id: PBO:0061375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 35","termid":"PBO:0061375"}


id: PBO:0040840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLCAP apoptosis inducing factor","termid":"PBO:0040840"}


id: MONDO:0044745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic injuries to the brain, cranial nerves, spinal cord, autonomic nervous system, or neuromuscular system, including iatrogenic injuries induced by surgical procedures.","definition_xrefs":["MESH:D020196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nervous system injury","secondary_identifiers":["SCTID:128239009","EFO:0009490"],"synonyms":[{"name":"Injuries, craniocervical","type":"related"},{"name":"Injuries, nervous system","type":"related"},{"name":"craniocervical Injuries","type":"related"},{"name":"craniocervical injury","type":"related"},{"name":"injury of nervous system","type":"exact"},{"name":"injury, craniocervical","type":"related"},{"name":"injury, nervous system","type":"related"},{"name":"nervous system Injuries","type":"related"},{"name":"nervous system Traumas","type":"related"},{"name":"nervous system injury","type":"exact"},{"name":"nervous system trauma","type":"related"}],"termid":"MONDO:0044745","xrefs":{"Monarch":{"xref_id":"0044745"}}}


id: GO:0002850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of T cell tolerance induction","termid":"GO:0002665"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"regulation of peripheral T cell tolerance induction","termid":"GO:0002849"},{"relation_name":"negatively_regulates","term_name":"peripheral T cell tolerance induction","termid":"GO:0002458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral T cell tolerance induction","synonyms":[{"name":"down regulation of peripheral T cell tolerance induction","type":"exact"},{"name":"down-regulation of peripheral T cell tolerance induction","type":"exact"},{"name":"downregulation of peripheral T cell tolerance induction","type":"exact"},{"name":"inhibition of peripheral T cell tolerance induction","type":"narrow"}],"termid":"GO:0002850"}


id: GO:0010257
data:
  {"annotated_genes":["SJAG_03782"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77094],"is_not":false,"summary":null,"term":"GO:0010257"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an NADH dehydrogenase complex.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"NADH dehydrogenase complex assembly","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010257","terms_by_termid":{"GO:0010257":null}}


id: GO:0060663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in which the solid core of the gland is hollowed out to form the duct.","definition_xrefs":["PMID:17336109","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in tube lumen cavitation","termid":"GO:0060609"},{"relation_name":"part_of","term_name":"salivary gland cavitation","termid":"GO:0060662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in salivary gland cavitation","synonyms":[{"name":"apoptosis involved in salivary gland cavitation","type":"narrow"}],"termid":"GO:0060663"}


id: PBO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major vault protein","termid":"PBO:0060215"}


id: MONDO:0017859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A potentially life-threatening poisoning, due to ingestion of the drug or consumption of the plant Colchicum autumnale, that usually begins with gastrointestinal symptoms (e.g. abdominal pain, nausea, vomiting, and diarrhea, that cause severe dehydration) and an initial leukocytosis leading to marrow failure (24 hours after ingestion), followed by potentially fatal multi-organ failure with mental status change, oliguric renal failure, disseminated intravascular coagulation, electrolyte imbalance, acid-base disturbance, cardiac failure/arrest and shock within 1-3 days.","definition_xrefs":["Orphanet:31824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colchicine poisoning","secondary_identifiers":["icd11.foundation:1617857912","SCTID:24354007","ICD9:974.7"],"termid":"MONDO:0017859","xrefs":{"Monarch":{"xref_id":"0017859"}}}


id: PBO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone) Nde2 (predicted)","termid":"PBO:0016946"}


id: PBO:0110432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WTAP pseudogene 2","termid":"PBO:0110432"}


id: GO:0046471
data:
  {"annotated_genes":["SJAG_00168","SJAG_04317","SJAG_03700","SJAG_03563"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72946,81757,94813,119698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol. They are important constituents of cell membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylglycerol metabolism","type":"exact"}],"termid":"GO:0046471","terms_by_termid":{"GO:0032049":null}}


id: MONDO:0044223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete radin blood group antigen (obsolete MONDO:0044223)","secondary_identifiers":["OMIM:111620"],"synonyms":[{"name":"RADIN blood group antigen","type":"related"},{"name":"RD","type":"related"},{"name":"blood Group--Radin antigen","type":"related"},{"name":"blood group, Radin","type":"exact"}],"termid":"MONDO:0044223","xrefs":{"Monarch":{"xref_id":"0044223"}}}


id: GO:0006259
data:
  {"annotated_genes":["SJAG_04372","SJAG_00796","SJAG_02116","SJAG_01601","SJAG_01620","SJAG_03942","SJAG_03048","SJAG_00500","SJAG_00272","SJAG_02667","SJAG_02828","SJAG_02465","SJAG_04877","SJAG_04245","SJAG_01652","SJAG_02334","SJAG_03855","SJAG_01378","SJAG_05280","SJAG_02607","SJAG_02616","SJAG_05180","SJAG_04147","SJAG_02690","SJAG_00311","SJAG_02200","SJAG_02082","SJAG_00177","SJAG_05979","SJAG_03728","SJAG_01938","SJAG_01385","SJAG_05372","SJAG_01572","SJAG_05301","SJAG_02948","SJAG_04457","SJAG_00995","SJAG_01540","SJAG_03734","SJAG_03780","SJAG_04950","SJAG_03722","SJAG_00618","SJAG_04199","SJAG_02490","SJAG_03624","SJAG_03613","SJAG_04530","SJAG_00823","SJAG_01076","SJAG_02212","SJAG_03612","SJAG_05020","SJAG_01624","SJAG_04752","SJAG_00198","SJAG_02800","SJAG_04142","SJAG_02181","SJAG_00399","SJAG_00429","SJAG_00406","SJAG_01605","SJAG_04418","SJAG_01119","SJAG_02527","SJAG_00512","SJAG_02439","SJAG_03451","SJAG_02652","SJAG_04368","SJAG_02031","SJAG_04843","SJAG_04353","SJAG_02627","SJAG_03680","SJAG_00213","SJAG_03665","SJAG_02521","SJAG_01884","SJAG_02866","SJAG_01163","SJAG_04410","SJAG_01010","SJAG_06022","SJAG_02339","SJAG_02545","SJAG_03994","SJAG_01401","SJAG_01573","SJAG_01708","SJAG_00266","SJAG_04586","SJAG_02658","SJAG_06642","SJAG_01138","SJAG_00364","SJAG_05232","SJAG_00312","SJAG_01207","SJAG_02575","SJAG_02194","SJAG_00573","SJAG_01807","SJAG_16460","SJAG_06597","SJAG_02162","SJAG_03417","SJAG_02362","SJAG_00874","SJAG_02818","SJAG_01648","SJAG_04064","SJAG_01377","SJAG_02872","SJAG_00884","SJAG_01480","SJAG_04266","SJAG_00111","SJAG_00100","SJAG_00901","SJAG_05105","SJAG_02748","SJAG_03843","SJAG_05193","SJAG_00935","SJAG_05173","SJAG_02198","SJAG_00369","SJAG_04855","SJAG_02837","SJAG_00441","SJAG_MIT05","SJAG_02992","SJAG_03898","SJAG_02237","SJAG_00757","SJAG_02098","SJAG_03567","SJAG_04303","SJAG_03219","SJAG_02214","SJAG_03997","SJAG_04114","SJAG_01156","SJAG_02262","SJAG_02908","SJAG_03702","SJAG_03724","SJAG_01611","SJAG_02592","SJAG_04540","SJAG_03720","SJAG_03941","SJAG_01067","SJAG_02680","SJAG_00783","SJAG_00857","SJAG_02199","SJAG_03436","SJAG_01777","SJAG_00119","SJAG_00329","SJAG_02556","SJAG_00758","SJAG_01068","SJAG_03685","SJAG_02528","SJAG_02708","SJAG_00696","SJAG_00939","SJAG_00805","SJAG_05257","SJAG_02172","SJAG_03160","SJAG_02311","SJAG_02295","SJAG_02226","SJAG_04778","SJAG_02416","SJAG_03092","SJAG_01878","SJAG_02822","SJAG_00941","SJAG_00863","SJAG_05012","SJAG_01832","SJAG_00729","SJAG_01823","SJAG_02563","SJAG_05237","SJAG_05197","SJAG_04816","SJAG_05323","SJAG_00611","SJAG_02182","SJAG_03051","SJAG_00153","SJAG_03300","SJAG_02298","SJAG_00623","SJAG_01887","SJAG_04863","SJAG_07002","SJAG_01374","SJAG_03906","SJAG_02385","SJAG_02394","SJAG_03957","SJAG_00559","SJAG_03675","SJAG_01762","SJAG_00908","SJAG_03206","SJAG_05373","SJAG_03926","SJAG_01185","SJAG_01873","SJAG_02771","SJAG_01644","SJAG_02039","SJAG_01210","SJAG_00814","SJAG_00293","SJAG_00980","SJAG_04879","SJAG_01584","SJAG_04150","SJAG_03438","SJAG_03525","SJAG_02610","SJAG_00377","SJAG_00327","SJAG_01173","SJAG_04932","SJAG_03026","SJAG_00819","SJAG_MIT06","SJAG_02261","SJAG_05239","SJAG_02299","SJAG_03927","SJAG_MIT07","SJAG_04994","SJAG_00536","SJAG_00247","SJAG_05295","SJAG_02267","SJAG_01049","SJAG_03618","SJAG_01419","SJAG_03751","SJAG_00208","SJAG_04671","SJAG_00250","SJAG_00073","SJAG_00640","SJAG_01332","SJAG_01205","SJAG_01495","SJAG_01410","SJAG_01050","SJAG_02074","SJAG_02348","SJAG_04748","SJAG_01221","SJAG_01267","SJAG_04971","SJAG_02187","SJAG_04272","SJAG_05353","SJAG_00172","SJAG_01979","SJAG_02698","SJAG_00727","SJAG_02724","SJAG_01776","SJAG_03495","SJAG_02104","SJAG_02223","SJAG_04210","SJAG_04205","SJAG_03695","SJAG_04791","SJAG_05333","SJAG_01044","SJAG_02918","SJAG_01263","SJAG_01677","SJAG_02294","SJAG_01698","SJAG_03221","SJAG_01864","SJAG_02503","SJAG_01354","SJAG_02079","SJAG_03454","SJAG_00728","SJAG_04183","SJAG_00400","SJAG_03097","SJAG_03068","SJAG_02460","SJAG_04341","SJAG_01971","SJAG_00475","SJAG_03699","SJAG_02058","SJAG_01948","SJAG_04089","SJAG_04190","SJAG_04995","SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109784],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[118090,71716,95472,74877,81605,94331,63356,107745,120805,97656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006284"},{"annotations":[78578,75979,57321,63550],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006285"},{"annotations":[79987],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0097510"},{"annotations":[75694,76767],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006287"},{"annotations":[98930,114577],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1902298"},{"annotations":[104068],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0071946"},{"annotations":[109160,117244,115404,111764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[96645],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045007"},{"annotations":[103372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006307"},{"annotations":[63728,63763,60131,71178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071897"},{"annotations":[63030,107036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006308"},{"annotations":[97791,74568,90933,113556,81649,73937,90308],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000729"},{"annotations":[66068,73992,76791,77465,66904],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[111788,57725,59132,60133,114665,71180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006310"},{"annotations":[72995,59174,73379,114777,98467,79979,89895,97989,63767,73850,74664,90666,120579,114279,59944,93310,73364,79949,89570,79198,114779,72800,67313,114778,69949,75591,114780,62129,116485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006281"},{"annotations":[74436,59892,72611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006260"},{"annotations":[79966,71647,109866,113474,113732,75447,74014,115321,94762,76932,101196,75464,81220],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006270"},{"annotations":[76769,75696],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0045004"},{"annotations":[63353,77659,81938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043137"},{"annotations":[76931,118091,117367,119184,72073],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006269"},{"annotations":[109748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022616"},{"annotations":[72646,75129,79078],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006271"},{"annotations":[114352,66863,115406,117246,68951,111767,72040],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[73994,98695],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0042148"},{"annotations":[80271],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000731"},{"annotations":[78566,104625,97019,110927],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1904161"},{"annotations":[120806,72110,59580,115015,74437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006265"},{"annotations":[119555,117584,77635,93565,73323,81004,81020,119145,73450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006302"},{"annotations":[90310,90934,118642,109473,100838],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[71602,75085,81947,73669,101063,76020,79073,113865,75124,81665,79963,76414,72641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000727"},{"annotations":[118166,115730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[75923,72606,79796,105948,74180,90935,105661,118643,76614,79361,81205,79463,81085,104993,81979,109560,72240,96656,76953,113559,107543,89810,98877,118092,71903,92636,72964,102962,80625,119568,113321,78866,81210,108112,119711,76076,90162,98464,102400,78885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000724"},{"annotations":[101730,113560,90936,106838,118644,90312,116124,112776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006303"},{"annotations":[78830,78217,112647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045002"},{"annotations":[76615],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000736"},{"annotations":[72724,119291,109962,79746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045003"},{"annotations":[72125,61542,101088,104676,58873,68088],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0070987"},{"annotations":[104677,79665,76637,79364,97658,106021,72123,74930],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0042276"},{"annotations":[97659],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[99202,120630,91065,100902,112648,97959,118645,102370,107877,90937,116863,89698,108444,112125,110329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[89940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070911"},{"annotations":[57828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035825"},{"annotations":[77104,79744,106766,98932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036297"},{"annotations":[120913,120905,120912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006314"},{"annotations":[76545],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006273"},{"annotations":[76544,72057],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006272"},{"annotations":[118278,102371,93535,107878,109561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043570"},{"annotations":[97793,101064,71992,102963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043007"},{"annotations":[105118],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[81070,81087,90938,93242,108536,96528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042138"},{"annotations":[111469,112958,106683,92108,110565],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0010780"},{"annotations":[118646,81068,109562],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000706"},{"annotations":[80243],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[112127,109475],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[91066,102336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[90251,112128,109476,80519,118951,103318,64137,98698],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[109563,58096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000710"},{"annotations":[102434],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1902346"},{"annotations":[100841,109477,112129],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[90252,102338,80522],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[72879,117526,65725,73833,71505,73096,75247,74297,74342,75253,118093,107746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006298"},{"annotations":[92150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032043"},{"annotations":[94335,104294,98902,113416,96513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032042"},{"annotations":[114353,97926,72890,110368,77955,104678,101090,104698,115740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043504"},{"annotations":[76519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006264"},{"annotations":[81089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097552"},{"annotations":[75127,76418,112387,105120,57189,117248,114994,109055,109163,72644,113218,96327,101141,119185,101204,63758,93737],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[97020,106023,104626,106741,120042,110928],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[97021,109164,91349,95739,106742,108795,106024,97053],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[113590,110944],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1990505"},{"annotations":[73670,79964,57371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[105121,112389,116864],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[73995,78829,109565,76795,77469,105662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006312"},{"annotations":[97961,109566,111379,90940,96608,110900,100026,65046,96852,97795,100733,109542,92720,114355,118648],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[104162],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[113591],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[118693],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[99556,104166,110713],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[109787],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[91368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036299"},{"annotations":[104755],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1902315"},{"annotations":[113734,118094,99901,113383,101065,106125,91361,109650,106220,114666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033260"},{"annotations":[62963,71819,74341,67294,58889,76070,90399,113075,69133,73832,78579,94336,118095,65008,78891,70005,80630,118554,77849,81983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006289"},{"annotations":[71715,111859,76617,95433,94773],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1901255"},{"annotations":[76768,81915,75695,78568],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006297"},{"annotations":[110800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006294"},{"annotations":[102401,96838,105949,73841,94426,102435,103299],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[113869,119125],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045739"},{"annotations":[119126,113870],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[112007,95659],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000781"},{"annotations":[112754],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905168"},{"annotations":[109221],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001034"},{"annotations":[108432,90832,104172,118073],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[110177,104175],"is_not":false,"rel_names":["positively_regulates","part_of","regulates"],"summary":null,"term":"GO:1905263"},{"annotations":[97527],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090297"},{"annotations":[104176],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[81067],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045951"},{"annotations":[90770,107940,118259],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120292"},{"annotations":[90833],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[98965],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[78813,118954,90400,97796,89777,106221,100027,61144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006301"},{"annotations":[61786,67272,58566,63572,61729,57193,63766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[91540,81551],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031848"},{"annotations":[107900,100088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106300"},{"annotations":[107749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006290"},{"annotations":[118536,118537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000720"},{"annotations":[102935,93243,91370,102373,105663,106647,70858,72723,81071,94452,92575,79466,102436,94525,106126,117381,108537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007131"},{"annotations":[106222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045458"},{"annotations":[104995,100844,102437,113417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036298"},{"annotations":[92576,77102,79348,104127,99278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000725"},{"annotations":[112150,110901],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0000018"},{"annotations":[74309,92680],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000779"},{"annotations":[111140],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010569"},{"annotations":[90941,118922,103419,96152,118126],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[105025],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[78738],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[104747,90070,105950,114356],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"},{"annotations":[108446,105026,110332,101144],"is_not":false,"rel_names":["negatively_regulates","regulates","part_of","is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[101145,116865,104072],"is_not":false,"rel_names":["regulates","is_a","negatively_regulates","part_of"],"summary":null,"term":"GO:0031582"},{"annotations":[101146],"is_not":false,"rel_names":["negatively_regulates","part_of","regulates","is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[104073],"is_not":false,"rel_names":["part_of","is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:0071807"},{"annotations":[71360,63036,96385,107544,99279,101066,102438,102964,108447,119293,109963,81208,81002],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031297"},{"annotations":[114359,77280],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0071932"},{"annotations":[71612,76943,76710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990414"},{"annotations":[76019,119294,80999,110903,109964,78519,112151,119146,76613,73430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[97799],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0071140"},{"annotations":[99902],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990516"},{"annotations":[95473,78727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000012"},{"annotations":[116866],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0071170"},{"annotations":[95126],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0071171"},{"annotations":[118074],"is_not":false,"rel_names":["regulates","part_of"],"summary":null,"term":"GO:0062209"},{"annotations":[90943,97963,98468,100735,111381,111789,116126,91372,117359,93311,100846,118650],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120290"},{"annotations":[112197,78737,117785,93613,64204,101508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[93205,72725,118096,65058,90894,114667,102648,59123,73320,80063,81084,107765,109568,72005,109852,111382,100975,111203,80624,113364,73361,118695,105954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000723"},{"annotations":[114781,114784,97965,113565,114782,114785,81917,114783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[72352,81985,71315,81922,92408,109934,117787,115664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[75806,93615,81549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"},{"annotations":[92639,90128,80639,92933,89941,73462,93752,98515,71680,111204,92030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006283"},{"annotations":[100089],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0019985"},{"annotations":[98903,65977,95434,97800,71717,89778,70440,66865,68952,107750,60739,67812,106026,114668,77353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolic process","termid":"GO:0090304"}],"gene_count":314,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00100":null,"SJAG_00111":null,"SJAG_00119":null,"SJAG_00153":null,"SJAG_00172":null,"SJAG_00177":null,"SJAG_00198":null,"SJAG_00208":null,"SJAG_00213":null,"SJAG_00247":null,"SJAG_00250":null,"SJAG_00266":null,"SJAG_00272":null,"SJAG_00293":null,"SJAG_00311":null,"SJAG_00312":null,"SJAG_00327":null,"SJAG_00329":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00377":null,"SJAG_00399":null,"SJAG_00400":null,"SJAG_00406":null,"SJAG_00429":null,"SJAG_00441":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00512":null,"SJAG_00536":null,"SJAG_00559":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00618":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_00696":null,"SJAG_00727":null,"SJAG_00728":null,"SJAG_00729":null,"SJAG_00757":null,"SJAG_00758":null,"SJAG_00783":null,"SJAG_00796":null,"SJAG_00805":null,"SJAG_00814":null,"SJAG_00819":null,"SJAG_00823":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00901":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00939":null,"SJAG_00941":null,"SJAG_00980":null,"SJAG_00995":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01049":null,"SJAG_01050":null,"SJAG_01067":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01119":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01185":null,"SJAG_01205":null,"SJAG_01207":null,"SJAG_01210":null,"SJAG_01221":null,"SJAG_01262":null,"SJAG_01263":null,"SJAG_01267":null,"SJAG_01332":null,"SJAG_01354":null,"SJAG_01374":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01385":null,"SJAG_01401":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01480":null,"SJAG_01495":null,"SJAG_01540":null,"SJAG_01572":null,"SJAG_01573":null,"SJAG_01584":null,"SJAG_01601":null,"SJAG_01605":null,"SJAG_01611":null,"SJAG_01620":null,"SJAG_01624":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01652":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01776":null,"SJAG_01777":null,"SJAG_01807":null,"SJAG_01823":null,"SJAG_01832":null,"SJAG_01864":null,"SJAG_01873":null,"SJAG_01878":null,"SJAG_01884":null,"SJAG_01887":null,"SJAG_01938":null,"SJAG_01948":null,"SJAG_01971":null,"SJAG_01979":null,"SJAG_02031":null,"SJAG_02039":null,"SJAG_02058":null,"SJAG_02074":null,"SJAG_02079":null,"SJAG_02082":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02116":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02181":null,"SJAG_02182":null,"SJAG_02187":null,"SJAG_02194":null,"SJAG_02198":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02212":null,"SJAG_02214":null,"SJAG_02223":null,"SJAG_02226":null,"SJAG_02237":null,"SJAG_02261":null,"SJAG_02262":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02295":null,"SJAG_02298":null,"SJAG_02299":null,"SJAG_02311":null,"SJAG_02334":null,"SJAG_02339":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02385":null,"SJAG_02394":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02503":null,"SJAG_02521":null,"SJAG_02527":null,"SJAG_02528":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02563":null,"SJAG_02575":null,"SJAG_02592":null,"SJAG_02607":null,"SJAG_02610":null,"SJAG_02616":null,"SJAG_02627":null,"SJAG_02652":null,"SJAG_02658":null,"SJAG_02667":null,"SJAG_02680":null,"SJAG_02690":null,"SJAG_02698":null,"SJAG_02708":null,"SJAG_02724":null,"SJAG_02748":null,"SJAG_02771":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_02837":null,"SJAG_02866":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_02918":null,"SJAG_02948":null,"SJAG_02992":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03051":null,"SJAG_03068":null,"SJAG_03092":null,"SJAG_03097":null,"SJAG_03160":null,"SJAG_03206":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03300":null,"SJAG_03417":null,"SJAG_03436":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03454":null,"SJAG_03495":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03612":null,"SJAG_03613":null,"SJAG_03618":null,"SJAG_03624":null,"SJAG_03665":null,"SJAG_03675":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03702":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03724":null,"SJAG_03728":null,"SJAG_03734":null,"SJAG_03751":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03926":null,"SJAG_03927":null,"SJAG_03941":null,"SJAG_03942":null,"SJAG_03957":null,"SJAG_03994":null,"SJAG_03997":null,"SJAG_04064":null,"SJAG_04089":null,"SJAG_04114":null,"SJAG_04142":null,"SJAG_04147":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04199":null,"SJAG_04205":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04266":null,"SJAG_04272":null,"SJAG_04303":null,"SJAG_04341":null,"SJAG_04353":null,"SJAG_04368":null,"SJAG_04372":null,"SJAG_04410":null,"SJAG_04418":null,"SJAG_04457":null,"SJAG_04530":null,"SJAG_04540":null,"SJAG_04586":null,"SJAG_04671":null,"SJAG_04748":null,"SJAG_04752":null,"SJAG_04778":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_04843":null,"SJAG_04855":null,"SJAG_04863":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04932":null,"SJAG_04950":null,"SJAG_04971":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05012":null,"SJAG_05020":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05180":null,"SJAG_05193":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05237":null,"SJAG_05239":null,"SJAG_05257":null,"SJAG_05280":null,"SJAG_05295":null,"SJAG_05301":null,"SJAG_05323":null,"SJAG_05333":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06022":null,"SJAG_06597":null,"SJAG_06642":null,"SJAG_07002":null,"SJAG_16460":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0055132"],"synonyms":[{"name":"DNA metabolism","type":"exact"},{"name":"cellular DNA metabolism","type":"exact"}],"termid":"GO:0006259","terms_by_termid":{"GO:0000012":null,"GO:0000018":null,"GO:0000706":null,"GO:0000707":null,"GO:0000708":null,"GO:0000709":null,"GO:0000710":null,"GO:0000712":null,"GO:0000720":null,"GO:0000722":null,"GO:0000723":null,"GO:0000724":null,"GO:0000725":null,"GO:0000727":null,"GO:0000729":null,"GO:0000730":null,"GO:0000731":null,"GO:0000736":null,"GO:0006260":null,"GO:0006264":null,"GO:0006265":null,"GO:0006269":null,"GO:0006270":null,"GO:0006271":null,"GO:0006272":null,"GO:0006273":null,"GO:0006279":null,"GO:0006281":null,"GO:0006283":null,"GO:0006284":null,"GO:0006285":null,"GO:0006287":null,"GO:0006289":null,"GO:0006290":null,"GO:0006294":null,"GO:0006297":null,"GO:0006298":null,"GO:0006301":null,"GO:0006302":null,"GO:0006303":null,"GO:0006307":null,"GO:0006308":null,"GO:0006310":null,"GO:0006311":null,"GO:0006312":null,"GO:0006314":null,"GO:0007004":null,"GO:0007131":null,"GO:0007534":null,"GO:0010520":null,"GO:0010569":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010833":null,"GO:0010845":null,"GO:0010846":null,"GO:0011000":null,"GO:0016233":null,"GO:0019985":null,"GO:0022616":null,"GO:0031297":null,"GO:0031582":null,"GO:0031848":null,"GO:0032042":null,"GO:0032043":null,"GO:0032210":null,"GO:0032215":null,"GO:0033260":null,"GO:0035825":null,"GO:0036297":null,"GO:0036298":null,"GO:0036299":null,"GO:0042138":null,"GO:0042148":null,"GO:0042276":null,"GO:0043007":null,"GO:0043137":null,"GO:0043504":null,"GO:0043570":null,"GO:0045002":null,"GO:0045003":null,"GO:0045004":null,"GO:0045007":null,"GO:0045128":null,"GO:0045458":null,"GO:0045739":null,"GO:0045951":null,"GO:0061674":null,"GO:0062209":null,"GO:0070911":null,"GO:0070914":null,"GO:0070987":null,"GO:0071140":null,"GO:0071170":null,"GO:0071171":null,"GO:0071807":null,"GO:0071897":null,"GO:0071932":null,"GO:0071946":null,"GO:0090001":null,"GO:0090297":null,"GO:0097510":null,"GO:0097552":null,"GO:0097680":null,"GO:0106300":null,"GO:0120290":null,"GO:0120292":null,"GO:0140529":null,"GO:0140530":null,"GO:1901255":null,"GO:1902298":null,"GO:1902315":null,"GO:1902346":null,"GO:1902681":null,"GO:1902975":null,"GO:1902977":null,"GO:1902983":null,"GO:1902985":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1903469":null,"GO:1904161":null,"GO:1904332":null,"GO:1904514":null,"GO:1905168":null,"GO:1905263":null,"GO:1990414":null,"GO:1990426":null,"GO:1990505":null,"GO:1990516":null,"GO:1990918":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: GO:0016331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of embryonic epithelia are generated and organized.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"}


id: GO:1990453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the disassembly and subsequent reassembly of nucleosomes. It associates with the coding region of transcriptionally active genes where it interacts with the RNA polymerase II and affects its processivity during co-transcriptional RNA processing and maturation. It exists as a functionally independent part of the NuA4 complex.","definition_xrefs":["PMID:24843044","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleosome disassembly/reassembly complex","synonyms":[{"name":"eaf5/7/3 complex","type":"narrow"}],"termid":"GO:1990453"}


id: GO:0032937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP), SREBP-cleavage-activating protein (SCAP), and an Insig protein (Insig-1 or Insig-2) in the ER membrane.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"SREBP-SCAP-Insig complex","termid":"GO:0032937"}


id: MONDO:1011144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, sheep","secondary_identifiers":["OMIA:001764-9940"],"termid":"MONDO:1011144","xrefs":{"Monarch":{"xref_id":"1011144"}}}


id: GO:1900269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of reverse transcription.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reverse transcription","termid":"GO:1900268"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"reverse transcription","termid":"GO:0001171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of reverse transcription","synonyms":[{"name":"down regulation of reverse transcription","type":"exact"},{"name":"down-regulation of reverse transcription","type":"exact"},{"name":"downregulation of reverse transcription","type":"exact"},{"name":"inhibition of reverse transcription","type":"narrow"}],"termid":"GO:1900269"}


id: MONDO:1012908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spontaneous systemic inflammation signs and increased delayed hypersensitivity response that occurs in pigs due to a mutation in the NLRP3 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:34580110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryopyrin-associated periodic syndrome, NLRP3-related, pig","secondary_identifiers":["OMIA:002464-9823"],"termid":"MONDO:1012908","xrefs":{"Monarch":{"xref_id":"1012908"}}}


id: PBO:0059331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6","termid":"PBO:0059331"}


id: GO:0031249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a denatured protein.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"denatured protein binding","termid":"GO:0031249"}


id: PBO:0029393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029393"}


id: PBO:0066244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 1 pseudogene 1","termid":"PBO:0066244"}


id: PBO:0034108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_subsequence","termid":"PBO:0034108"}


id: PBO:0080653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 pseudogene 2","termid":"PBO:0080653"}


id: PBO:0055711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMBR1 domain containing 1","termid":"PBO:0055711"}


id: MONDO:0010367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SHOX-related short stature is a primary bone dysplasia characterized by a height that is 2 standard deviations below the corresponding mean height for a given age, sex and population group, in the absence of obvious skeletal abnormalities and other diseases and with normal developmental milestones. Patients present normal bone age with normal limbs, shortening of the extremities (significantly lower extremities-trunk and sitting height-to-height ratios), normal hGH values, normal karyotype, and Leri-Weill dyschondrosteosis-like radiological signs (e.g. triangularization of distal radial epiphyses, pyramidalization of distal carpal row, and lucency of the distal radius on the ulnar side). Mesomelic disproportions and Madelung deformity are not apparent at a young age, but may develop later in life or never.","definition_xrefs":["Orphanet:314795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOX-related short stature","secondary_identifiers":["DOID:0112120","MEDGEN:375584","SCTID:763868006","GARD:17434","MESH:C564479","OMIM:300582","UMLS:C1845118"],"synonyms":[{"name":"ISS","type":"related"},{"name":"short stature, idiopathic familial","type":"exact"},{"name":"short stature, idiopathic, X-linked","type":"related"}],"termid":"MONDO:0010367","xrefs":{"Monarch":{"xref_id":"0010367"}}}


id: PBO:0035824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035824"}


id: PBO:0082721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cyclin genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; contains TPR repeats","termid":"PBO:0082721"}


id: GO:0002801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antifungal peptide production","termid":"GO:0002789"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide secretion","termid":"GO:0002795"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide secretion","termid":"GO:0002800"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide secretion","termid":"GO:0002782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antifungal peptide secretion","synonyms":[{"name":"down regulation of antifungal peptide secretion","type":"exact"},{"name":"down-regulation of antifungal peptide secretion","type":"exact"},{"name":"downregulation of antifungal peptide secretion","type":"exact"},{"name":"inhibition of antifungal peptide secretion","type":"narrow"}],"termid":"GO:0002801"}


id: PBO:0045473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRG1 pseudogene 2","termid":"PBO:0045473"}


id: PBO:0072474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 3","termid":"PBO:0072474"}


id: PBO:0090822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RAP1 ortholog, GTPase exchange factor, Zfs1 target number 1","termid":"PBO:0090822"}


id: GO:0032112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein histidine kinase activity (obsolete GO:0032112)","synonyms":[{"name":"down regulation of protein histidine kinase activity","type":"exact"},{"name":"down-regulation of protein histidine kinase activity","type":"exact"},{"name":"downregulation of protein histidine kinase activity","type":"exact"},{"name":"inhibition of protein histidine kinase activity","type":"narrow"},{"name":"protein histidine kinase inhibitor","type":"related"}],"termid":"GO:0032112"}


id: PBO:0029024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_silent_mating-type_cassette","termid":"PBO:0029024"}


id: FYPO:0006564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to ethanol when the cell population is in stationary phase. Cells stop growing (and may die) at a concentration of ethanol that allows wild type cells to grow.","definition_xrefs":["PMID:9372444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical in stationary phase","termid":"FYPO:0008000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to ethanol in stationary phase","synonyms":[{"name":"decreased cell population growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"decreased growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"hypersensitive to ethanol in stationary phase","type":"exact"},{"name":"sensitive to ethanol during stationary phase","type":"exact"},{"name":"sensitive to ethyl alcohol in stationary phase","type":"exact"}],"termid":"FYPO:0006564"}


id: PBO:0039992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 6","termid":"PBO:0039992"}


id: MONDO:0017022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease specific to childhood associated with a systemic vasculitis (obsolete MONDO:0017022)","secondary_identifiers":["Orphanet:264709"],"synonyms":[{"name":"secondary ILD specific to childhood associated with a systemic vasculitis","type":"exact"}],"termid":"MONDO:0017022","xrefs":{"Monarch":{"xref_id":"0017022"}}}


id: MONDO:0008672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Watson syndrome is believed to be a variant of neurofibromatosis type 1. The symptoms of this condition are pulmonary valvular stenosis, cafe-au-lait spots and short stature. IQTest scores for individuals with Watson syndromecan rangebetween 60-100.Many people with this condition also have a larger than average head size (macrocephaly) and Lisch nodules. While mutations in the NF1 gene have been found in families with Watson syndrome, the exactcause of this condition is unknown. The conditionis inherited in an autosomal dominant pattern. Treatment aims at managing the specific symptoms of an individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis-Noonan syndrome","termid":"MONDO:0011035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Watson syndrome","secondary_identifiers":["UMLS:C0553586","DOID:0070483","OMIM:193520","ICD9:709.8","GARD:5540","MEDGEN:107817","Orphanet:3444","SCTID:403820003","icd11.foundation:1674178232"],"synonyms":[{"name":"WTSN","type":"related"},{"name":"Watson syndrome","type":"exact"},{"name":"cafe-Au-lait Spots with pulmonic stenosis","type":"related"},{"name":"pulmonic stenosis with cafe-Au-lait Spots","type":"related"}],"termid":"MONDO:0008672","xrefs":{"Monarch":{"xref_id":"0008672"}}}


id: MONDO:0013351
data:
  {"annotated_genes":["SJAG_00904"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88819],"is_not":false,"summary":null,"term":"MONDO:0013351"}]},"cv_name":"mondo","definition":"Infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly is a rare, central nervous system malformation syndrome characterized by progressive microcephaly with profound motor delay and intellectual disability, associated with hypertonia, spasticity, clonus, and seizures, with brain imaging revealing severe cerebral and cerebellar atrophy, and poor myelination.","definition_xrefs":["Orphanet:402364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00904":null},"genotype_count":0,"is_obsolete":false,"name":"infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462271","UMLS:C3150921","DOID:0111262","OMIM:613668","GARD:10995"],"synonyms":[{"name":"microcephaly, postnatal progressive, with seizures and brain atrophy","type":"related"},{"name":"postnatal progressive microcephaly, seizures, and brain atrophy","type":"related"}],"termid":"MONDO:0013351","terms_by_termid":{"MONDO:0013351":null},"xrefs":{"Monarch":{"xref_id":"0013351"}}}


id: GO:0018246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and coenzyme A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-coenzyme A linkage","termid":"GO:0018246"}


id: PBO:0028192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_DNA_replication_initiation","termid":"PBO:0028192"}


id: PBO:0060519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 1","termid":"PBO:0060519"}


id: GO:0002757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by a ligand binding to its receptor that lead to the activation or perpetuation of an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"immune response-activating signaling pathway","synonyms":[{"name":"immune response-activating signal transduction","type":"exact"}],"termid":"GO:0002757"}


id: PBO:0065781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 1","termid":"PBO:0065781"}


id: PATO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"semi-fertile","termid":"PATO:0001767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male semi-fertile","termid":"PATO:0001761"}


id: GO:1902606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["PMID:23407708","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of large conductance calcium-activated potassium channel activity (obsolete GO:1902606)","synonyms":[{"name":"regulation of BK KCa channels","type":"exact"},{"name":"regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"regulation of BK channel activity","type":"related"},{"name":"regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902606"}


id: GO:1902481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a gamma-tubulin complex.","definition_xrefs":["GOC:TermGenie","PMID:23885124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"gamma-tubulin complex assembly","synonyms":[{"name":"gamma-tubulin complex formation","type":"exact"}],"termid":"GO:1902481"}


id: GO:1903528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dCDP biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900397"},{"relation_name":"regulates","term_name":"dCDP biosynthetic process","termid":"GO:0006240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of dCDP biosynthetic process","synonyms":[{"name":"regulation of dCDP anabolism","type":"exact"},{"name":"regulation of dCDP biosynthesis","type":"exact"},{"name":"regulation of dCDP formation","type":"exact"},{"name":"regulation of dCDP synthesis","type":"exact"}],"termid":"GO:1903528"}


id: PBO:0091973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gut2","termid":"PBO:0091973"}


id: GO:0008668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + ATP + holo-[ACP] = 2,3-dihydroxybenzoyl-[ACP] + AMP + diphosphate.","definition_xrefs":["RHEA:61652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate--[aryl-carrier protein] ligase","secondary_identifiers":["EC:6.2.1.71","MetaCyc:RXN-19445","KEGG_REACTION:R12777"],"synonyms":[{"name":"(2,3-dihydroxybenzoyl)adenylate synthase activity","type":"narrow"},{"name":"2,3-dihydroxybenzoate-AMP ligase activity","type":"narrow"}],"termid":"GO:0008668"}


id: PBO:0052917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 17-1","termid":"PBO:0052917"}


id: PBO:0060914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 1","termid":"PBO:0060914"}


id: PBO:0091752
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kre9(Nine) Homolog","termid":"PBO:0091752"}


id: GO:0071042
data:
  {"annotated_genes":["SJAG_01521","SJAG_04084","SJAG_01191","SJAG_03179","SJAG_01818","SJAG_04824","SJAG_04006","SJAG_00854","SJAG_04818","SJAG_04153","SJAG_04321","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94018,94849,97697,99023,103877,106198,107066,108278,109272,117287,117726,120168],"is_not":false,"summary":null,"term":"GO:0071042"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target mRNA.","definition_xrefs":["GOC:dgf","PMID:15145828","PMID:16431988","PMID:17643380","PMID:18644474","PMID:15828860","PMID:18000032","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent mRNA catabolic process","termid":"GO:0071047"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent mRNA catabolic process","type":"related"}],"termid":"GO:0071042","terms_by_termid":{"GO:0071042":null}}


id: GO:1990972
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Glycoprotein complex of the C1q/TNF superfamily involved in cell adhesion. A homotrimer that will combine to form supramolecular Multimerin structures.","definition_xrefs":["GOC:bhm","PMID:9454761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-matrix adhesion","termid":"GO:0098637"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"multimerin complex","synonyms":[{"name":"EMILIN-3 complex","type":"narrow"},{"name":"EMILIN-4 complex","type":"narrow"},{"name":"Elastic microfibrillar interface 3 complex","type":"narrow"},{"name":"Elastic microfibrillar interface 4 complex","type":"narrow"},{"name":"Multimerin-1 complex","type":"narrow"},{"name":"Multimerin-2 complex","type":"narrow"},{"name":"Platelet glycoprotein Ia* complex","type":"narrow"},{"name":"p155 complex","type":"narrow"}],"termid":"GO:1990972"}


id: PBO:0011126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin homolog Far8 (predicted)","termid":"PBO:0011126"}


id: PBO:0084580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL003W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL004w","termid":"PBO:0084580"}


id: GO:0102060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (-)-endo-alpha-bergamotene + diphosphoric acid.","definition_xrefs":["RHEA:30471","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"endo-alpha-bergamotene synthase activity","secondary_identifiers":["EC:4.2.3.54","MetaCyc:RXN-10482"],"synonyms":[{"name":"endo-alpha-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102060"}


id: GO:0003150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the muscular septum is generated and organized. The muscular septum is the lower part of the ventricular septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue morphogenesis","termid":"GO:0060415"},{"relation_name":"part_of","term_name":"ventricular septum morphogenesis","termid":"GO:0060412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscular septum morphogenesis","termid":"GO:0003150"}


id: PBO:0063158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 4","termid":"PBO:0063158"}


id: PBO:0080591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 18","termid":"PBO:0080591"}


id: GO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature over time, from its formation to the mature structure. The vasculature is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the organism.","definition_xrefs":["UBERON:0002409","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"circulatory system development","termid":"GO:0072359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasculature development","synonyms":[{"name":"vascular system development","type":"related"}],"termid":"GO:0001944"}


id: GO:1900491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900491"}


id: PBO:0108574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo Sfi1 Interactor","termid":"PBO:0108574"}


id: PBO:0085050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; deletion mutant is synthetically sick or lethal with alpha-synuclein","termid":"PBO:0085050"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: GO:0015575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mannitol from one side of a membrane to the other. Mannitol is the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"mannitol transmembrane transporter activity","secondary_identifiers":["GO:0015586"],"synonyms":[{"name":"mannitol permease activity","type":"exact"}],"termid":"GO:0015575"}


id: PBO:0050718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 4","termid":"PBO:0050718"}


id: GO:1903415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of flavonoid from endoplasmic reticulum to plant-type vacuole.","definition_xrefs":["GO_REF:0000078","GOC:tb","GOC:TermGenie","PMID:25116949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"flavonoid transport from endoplasmic reticulum to plant-type vacuole","synonyms":[{"name":"flavonoid accumulation in vacuole","type":"related"}],"termid":"GO:1903415"}


id: GO:0090665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing at least one glycosylated protein, may be held together by both covalent and noncovalent bonds.","definition_xrefs":["GOC:pf","PMID:7693675","PMID:8662961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glycoprotein complex","termid":"GO:0090665"}


id: PBO:0060402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 10, NatA catalytic subunit","termid":"PBO:0060402"}


id: PBO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ypt subfamily","termid":"PBO:0001421"}


id: PBO:0054810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2223","termid":"PBO:0054810"}


id: PBO:0054239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1621","termid":"PBO:0054239"}


id: PBO:0052202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ1 antisense RNA 1","termid":"PBO:0052202"}


id: PBO:0049927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte growth factor-regulated tyrosine kinase substrate","termid":"PBO:0049927"}


id: PBO:0051750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inturned planar cell polarity protein","termid":"PBO:0051750"}


id: PR:Q9UUD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prp38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.08","synonyms":[{"name":"Spom972h-prp38","type":"exact"}],"termid":"PR:Q9UUD2"}


id: GO:1900827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"},{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization during cardiac muscle cell action potential","synonyms":[{"name":"activation of membrane depolarization during cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1900827"}


id: SO:0000878
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains the code for one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic","termid":"SO:0000878"}


id: MONDO:0011205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium chain 3-ketoacyl-Coa thiolase deficiency","secondary_identifiers":["MESH:C566566","OMIM:602199","UMLS:C1865781","MEDGEN:356367"],"synonyms":[{"name":"Mckat deficiency","type":"related"},{"name":"medium chain 3-ketoacyl-Coa thiolase deficiency","type":"exact"},{"name":"medium-chain 3-ketoacyl-coa thiolase deficiency","type":"related"}],"termid":"MONDO:0011205","xrefs":{"Monarch":{"xref_id":"0011205"}}}


id: PR:Q10499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An apoptosis-inducing factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.14c","secondary_identifiers":["UniProtKB:Q10499"],"synonyms":[{"name":"Spom972h-AIFM3","type":"exact"}],"termid":"PR:Q10499"}


id: PR:Q9UT00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An extended synaptotagmin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PYUK71.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUK71.03c","secondary_identifiers":["UniProtKB:Q9UT00"],"synonyms":[{"name":"Spom972h-ESYT1","type":"exact"}],"termid":"PR:Q9UT00"}


id: PBO:0090619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, xap-5-like protein","termid":"PBO:0090619"}


id: SO:0000028
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Two bases paired opposite each other by hydrogen bonds creating a secondary structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"base_pair","secondary_identifiers":["http://en.wikipedia.org/wiki/Base_pair"],"synonyms":[{"name":"base pair","type":"exact"}],"termid":"SO:0000028"}


id: PBO:0041045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 2","termid":"PBO:0041045"}


id: PBO:0030011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiosis_and_sporulation_in_haploid","termid":"PBO:0030011"}


id: PBO:0085243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; potential role in the secretory pathway; seamless-GFP and mCherry fusion proteins localize to the vacuole, while SWAT-GFP fusion localizes to both the endoplasmic reticulum and vacuole; suppresses toxicity of slow-folding human Z-type alpha1-antitrypsin variant associated with liver cirrhosis and emphysema","termid":"PBO:0085243"}


id: PBO:0085704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity","termid":"PBO:0085704"}


id: PATO:0015006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a structure by virtue of it consisting of many of repeated, similar or identical subunits, arranged in some orderly array.","definition_xrefs":["GOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymeric","termid":"PATO:0015006"}


id: PBO:0004248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rsv1","termid":"PBO:0004248"}


id: PBO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MAC1","termid":"PBO:0000338"}


id: PBO:0083522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PEX14/YGL153W","termid":"PBO:0083522"}


id: PBO:0064471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 2, accessory subunit","termid":"PBO:0064471"}


id: FYPO:0002500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein palmitoylation","synonyms":[{"name":"normal protein/peptide palmitoylation","type":"exact"}],"termid":"FYPO:0002500"}


id: PBO:0088394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2","termid":"PBO:0088394"}


id: PBO:0085386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-ATPase; isoform of Pma1p, involved in pumping protons out of the cell; regulator of cytoplasmic pH and plasma membrane potential","termid":"PBO:0085386"}


id: MOD:01111
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a dimethoxybenzhydryl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethoxybenzhydryl modified residue","synonyms":[{"name":"4,4'-dimethoxybenzhydryl","type":"exact"},{"name":"Mbh","type":"exact"},{"name":"bis(4-methoxyphenyl)methyl","type":"exact"}],"termid":"MOD:01111"}


id: PBO:0045574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 26","termid":"PBO:0045574"}


id: GO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a fungus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of fungus","secondary_identifiers":["GO:0016047","GO:0009599"],"synonyms":[{"name":"detection of fungi","type":"exact"},{"name":"detection of parasitic fungi","type":"narrow"},{"name":"detection of parasitic fungus","type":"narrow"},{"name":"perception of fungi","type":"related"},{"name":"perception of fungus","type":"related"},{"name":"perception of parasitic fungi","type":"narrow"},{"name":"perception of parasitic fungus","type":"related"}],"termid":"GO:0016046"}


id: MONDO:1012822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myopathy that occurs in pigs due to a mutation in the SPTBN4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myopathy, SPTBN4-related, pig","secondary_identifiers":["OMIA:002232-9823"],"termid":"MONDO:1012822","xrefs":{"Monarch":{"xref_id":"1012822"}}}


id: PBO:0064220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 1","termid":"PBO:0064220"}


id: GO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hemopoietic stem cell acquires the specialized features of a B-1 B cell. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation","termid":"GO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1 B cell differentiation","synonyms":[{"name":"B-1 B cell development","type":"related"},{"name":"B-1 B lymphocyte differentiation","type":"exact"},{"name":"B-1 B-cell differentiation","type":"exact"},{"name":"B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001923"}


id: MONDO:0010140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypothyroidism due to dysfunction of the hypothalamus, assumed to result in reduced secretion of thyrotropin- releasing hormone.","definition_xrefs":["NCIT:C121741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"central congenital hypothyroidism","termid":"MONDO:0016410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated thyrotropin-releasing hormone deficiency","secondary_identifiers":["ICD9:253.4","GARD:17179","OMIM:275120","Orphanet:238670","MEDGEN:113137","SCTID:10736002","UMLS:C0220998"],"synonyms":[{"name":"TRH deficiency","type":"related"},{"name":"hypothalamic hypothyroidism","type":"related"},{"name":"isolated TRF deficiency","type":"exact"},{"name":"isolated TRH deficiency","type":"exact"},{"name":"isolated TSH-releasing factor deficiency","type":"exact"},{"name":"isolated prothyroliberin deficiency","type":"exact"},{"name":"isolated protirelin deficiency","type":"exact"},{"name":"isolated thyroliberin deficiency","type":"exact"},{"name":"isolated thyrotropin-releasing factor deficiency","type":"exact"},{"name":"tertiary hypothyroidism","type":"exact"},{"name":"thyrotropin-releasing hormone deficiency","type":"related"}],"termid":"MONDO:0010140","xrefs":{"Monarch":{"xref_id":"0010140"}}}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12542:SF7","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: PBO:0119640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR checkpoint kinase","termid":"PBO:0119640"}


id: MONDO:0018875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare cancer predisposition syndrome characterized by the early-onset of multiple primary cancers such as breast cancer, soft tissue and bone sarcomas, brain tumors and adrenal cortical carcinoma (ACC).","definition_xrefs":["Orphanet:524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Li-Fraumeni syndrome","secondary_identifiers":["MEDGEN:88399","MESH:D016864","NORD:1913","GARD:6902","ICD9:V84.01","NCIT:C3476","OMIM:609266","DOID:3012","MedDRA:10066795","OMIM:151623","icd11.foundation:1968061860","SCTID:428850001","UMLS:C0085390","DOID:0111503"],"synonyms":[{"name":"LFS","type":"exact"},{"name":"LFS1","type":"related"},{"name":"LFS3","type":"related"},{"name":"Li Fraumeni syndrome","type":"exact"},{"name":"Li-Fraumeni familial cancer susceptibility syndrome","type":"exact"},{"name":"Li-Fraumeni familiar cancer susceptibility syndrome","type":"exact"},{"name":"Li-Fraumeni syndrome","type":"exact"},{"name":"Li-Fraumeni syndrome caused by mutation in TP53","type":"exact"},{"name":"Li-Fraumeni-like syndrome","type":"related"},{"name":"SBLA syndrome","type":"exact"},{"name":"SBLA syndrome (sarcoma, breast, leukemia, and adrenal gland)","type":"related"},{"name":"TP53 Li-Fraumeni syndrome","type":"exact"},{"name":"sarcoma family syndrome of 51 and Fraumeni","type":"related"},{"name":"sarcoma family syndrome of Li and Fraumeni","type":"related"},{"name":"sarcoma, breast, leukaemia and adrenal gland syndrome","type":"exact"},{"name":"sarcoma, breast, leukemia and adrenal gland syndrome","type":"exact"}],"termid":"MONDO:0018875","xrefs":{"Monarch":{"xref_id":"0018875"}}}


id: GO:0032816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"positively_regulates","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell activation","synonyms":[{"name":"activation of natural killer cell activation","type":"narrow"},{"name":"positive regulation of NK cell activation","type":"exact"},{"name":"stimulation of natural killer cell activation","type":"narrow"},{"name":"up regulation of natural killer cell activation","type":"exact"},{"name":"up-regulation of natural killer cell activation","type":"exact"},{"name":"upregulation of natural killer cell activation","type":"exact"}],"termid":"GO:0032816"}


id: MONDO:0021446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the epiglottis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"},{"relation_name":"is_a","term_name":"epiglottis neoplasm","termid":"MONDO:0004109"},{"relation_name":"is_a","term_name":"benign neoplasm of hypopharynx","termid":"MONDO:0021461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of epiglottis","secondary_identifiers":["NCIT:C4606","SCTID:92089006","icd11.foundation:1549564600","MEDGEN:83861","UMLS:C0347236"],"synonyms":[{"name":"benign Epiglottis neoplasm","type":"exact"},{"name":"benign Epiglottis tumor","type":"exact"},{"name":"benign Epiglottis tumour","type":"exact"},{"name":"benign epiglottic neoplasm","type":"exact"},{"name":"benign epiglottic tumor","type":"exact"},{"name":"benign epiglottic tumour","type":"exact"},{"name":"benign neoplasm of the Epiglottis","type":"exact"},{"name":"benign tumor of Epiglottis","type":"exact"},{"name":"benign tumor of the Epiglottis","type":"exact"},{"name":"benign tumour of Epiglottis","type":"exact"},{"name":"benign tumour of the Epiglottis","type":"exact"},{"name":"epiglottis benign neoplasm","type":"exact"}],"termid":"MONDO:0021446","xrefs":{"Monarch":{"xref_id":"0021446"}}}


id: GO:1900991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of scopolamine.","definition_xrefs":["PMID:18251710","PMID:16720272","GOC:yaf","PMID:32879484","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"scopolamine biosynthetic process","secondary_identifiers":["GO:1900989"],"synonyms":[{"name":"scopolamine anabolism","type":"exact"},{"name":"scopolamine biosynthesis","type":"exact"},{"name":"scopolamine formation","type":"exact"},{"name":"scopolamine metabolic process","type":"broad"},{"name":"scopolamine metabolism","type":"broad"},{"name":"scopolamine synthesis","type":"exact"}],"termid":"GO:1900991"}


id: PBO:0056090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme g1","termid":"PBO:0056090"}


id: PBO:0070452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 9","termid":"PBO:0070452"}


id: GO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"is_a","term_name":"regulation of basidiospore formation","termid":"GO:0075302"},{"relation_name":"negatively_regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of basidiospore formation","termid":"GO:0075304"}


id: PBO:0082694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the INO80 chromatin remodeling complex; critical for INO80 function; involved in regulation of chromosome segregation and maintenance of normal centromeric chromatin structure; human ortholog INO80C is a member of the human INO80 complex; implicated in DNA repair based on genetic interactions with RAD52 epistasis genes","termid":"PBO:0082694"}


id: GO:0048079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental pigmentation","termid":"GO:0048070"},{"relation_name":"regulates","term_name":"cuticle pigmentation","termid":"GO:0048067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cuticle pigmentation","termid":"GO:0048079"}


id: MONDO:0002283
data:
  {"annotated_genes":["SJAG_04757","SJAG_05277","SJAG_00115","SJAG_03866"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88691,88690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[88676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[87370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"}]},"cv_name":"mondo","definition":"A nonspecific term referring both to the pathologic finding of swelling of distal portions of axons in the brain and to disorders which feature this finding. Neuroaxonal dystrophy is seen in various genetic diseases, vitamin deficiencies, and aging. Infantile neuroaxonal dystrophy is an autosomal recessive disease characterized by arrested psychomotor development at 6 months to 2 years of age, ataxia, brain stem dysfunction, and quadriparesis. Juvenile and adult forms also occur. Pathologic findings include brain atrophy and widespread accumulation of axonal spheroids throughout the neuroaxis, peripheral nerves, and dental pulp. (From Davis & Robertson, Textbook of Neuropathology, 2nd ed, p927)","definition_xrefs":["MESH:D019150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03866":null,"SJAG_04757":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neuroaxonal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2367","UMLS:C0338473","MEDGEN:90924","SCTID:230365004","NCIT:C161542"],"termid":"MONDO:0002283","terms_by_termid":{"MONDO:0010476":null,"MONDO:0011706":null,"MONDO:0014290":null},"xrefs":{"Monarch":{"xref_id":"0002283"}}}


id: PBO:0070606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 74","termid":"PBO:0070606"}


id: GO:1902649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GOC:di","GO_REF:0000058","PMID:22199252","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A-H2B dimer displacement (obsolete GO:1902649)","termid":"GO:1902649"}


id: PBO:0080352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 6 pseudogene","termid":"PBO:0080352"}


id: PBO:0063750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 15","termid":"PBO:0063750"}


id: PBO:0114485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial repliratory complex assembly factro/arginine methyltransferase, human NDUFAF7 ortholog","termid":"PBO:0114485"}


id: MONDO:1040031
data:
  {"annotated_genes":["SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"}]},"cv_name":"mondo","definition":"A spectrum of diseases related to monoallelic variants in DYNC1H1 and characterized by variable neuromuscular and/or neurodevelopmental presentations. While not absolute, there appear to be genotype-phenotype correlations based on the location of the variant. Patients with variants in the stem domain of DYNC1H1 have been reported with a predominantly neuromuscular presentation, including congenital myopathy, spinal muscular atrophy, Charcot-Marie-Tooth (CMT), and less frequently, intellectual disability and autism. Patients with variants in the motor domain predominantly present with neurodevelopmental presentations including intellectual disability, seizures, malformations of cortical development (abnormal brain MRI findings such as pachygyria, heterotopias, enlarged ventricles, hypoplasia of CC, brain stem, cerebellum), autism, and less frequently, neuromuscular phenotypes.","definition_xrefs":["PMID:32788638","PMID:38513047","PMID:33991169","PMID:32656949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"exudative vitreoretinopathy","termid":"MONDO:0019516"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dyneinopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:1040031","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null},"xrefs":{"Monarch":{"xref_id":"1040031"}}}


id: PBO:0030686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_vegetative_growth","termid":"PBO:0030686"}


id: PBO:0088716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase","termid":"PBO:0088716"}


id: PBO:0055320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2748","termid":"PBO:0055320"}


id: GO:0039658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing TBK1 (TANK-binding kinase 1), IKBKE (I-Kappa-B kinase epsilon/IKKE/IKK-epsilon) and the DEAD box family RNA helicase DDX3.","definition_xrefs":["PMID:18636090","VZ:719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TBK1-IKKE-DDX3 complex","synonyms":[{"name":"TBK1-IKBKE-DDX3 complex","type":"exact"}],"termid":"GO:0039658"}


id: GO:0070784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"}


id: PBO:0002668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb9","termid":"PBO:0002668"}


id: GO:1900983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vindoline.","definition_xrefs":["PMID:23864440","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid metabolic process","termid":"GO:0046447"},{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"vindoline metabolic process","synonyms":[{"name":"vindoline metabolism","type":"exact"}],"termid":"GO:1900983"}


id: MONDO:0022893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis arthrogryposis cleft palate","secondary_identifiers":["GARD:1587"],"termid":"MONDO:0022893","xrefs":{"Monarch":{"xref_id":"0022893"}}}


id: PBO:0042061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 124","termid":"PBO:0042061"}


id: GO:1904852
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of trimethylamine-N-oxide reductase (cytochrome c) activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","PMID:11056172","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"trimethylamine-N-oxide reductase (cytochrome c) complex","termid":"GO:1904852"}


id: GO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of cell wall invaginations in a synergid cell, similar to those in transfer cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"filiform apparatus","termid":"GO:0043680"}


id: PBO:0058995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX interacting protein","termid":"PBO:0058995"}


id: PBO:0060110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 11","termid":"PBO:0060110"}


id: PBO:0064316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 5","termid":"PBO:0064316"}


id: PBO:0109620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 14 pseudogene","termid":"PBO:0109620"}


id: MOD:00214
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-serine residue to the polymer dermatan 4-sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["PubMed:3472204","RESID:AA0209","PubMed:2914936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"beta-heparin","type":"exact"},{"name":"chondroitin sulfate B","type":"exact"},{"name":"dermatan 4-sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"},{"name":"poly[beta-1,4-L-idopyranuronosyl-alpha-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine","type":"exact"}],"termid":"MOD:00214"}


id: PBO:0061584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 4","termid":"PBO:0061584"}


id: GO:1905480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:10377385"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glutamate-ammonia ligase activity (obsolete GO:1905480)","synonyms":[{"name":"activation of L-glutamate:ammonia ligase (ADP-forming)","type":"narrow"},{"name":"activation of L-glutamine synthetase activity","type":"narrow"},{"name":"activation of glutamate-ammonia ligase activity","type":"narrow"},{"name":"activation of glutamine synthetase activity","type":"narrow"},{"name":"activation of glutamylhydroxamic synthetase activity","type":"narrow"},{"name":"positive regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"positive regulation of L-glutamine synthetase activity","type":"exact"},{"name":"positive regulation of glutamine synthetase activity","type":"exact"},{"name":"positive regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"up regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"up regulation of L-glutamine synthetase activity","type":"exact"},{"name":"up regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"up regulation of glutamine synthetase activity","type":"exact"},{"name":"up regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"up-regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"up-regulation of L-glutamine synthetase activity","type":"exact"},{"name":"up-regulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"up-regulation of glutamine synthetase activity","type":"exact"},{"name":"up-regulation of glutamylhydroxamic synthetase activity","type":"exact"},{"name":"upregulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"upregulation of L-glutamine synthetase activity","type":"exact"},{"name":"upregulation of glutamate-ammonia ligase activity","type":"exact"},{"name":"upregulation of glutamine synthetase activity","type":"exact"},{"name":"upregulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905480"}


id: PBO:0047132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 171 member A1","termid":"PBO:0047132"}


id: PATO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000723 high yield (obsolete PATO:0000723)","termid":"PATO:0000723"}


id: MONDO:0011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, intellectual disability, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","secondary_identifiers":["UMLS:C1970039","OMIM:605856","MESH:C566989","MEDGEN:370814"],"synonyms":[{"name":"short stature, intellectual disability, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","type":"exact"},{"name":"short stature, mental retardation, callosal agenesis, Heminasal hypoplasia, microphthalmia, and atypical clefting","type":"exact"}],"termid":"MONDO:0011611","xrefs":{"Monarch":{"xref_id":"0011611"}}}


id: PBO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein Mug20","termid":"PBO:0001854"}


id: MOD:00069
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-palmitoyl-L-cysteine.","definition_xrefs":["RESID:AA0060","PubMed:4575979","PubMed:9593755","PubMed:10896212","PubMed:9056182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated-L-cysteine","termid":"MOD:01684"},{"relation_name":"is_a","term_name":"alpha-amino palmitoylated residue","termid":"MOD:01685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"N-palmitoyl-L-cysteine","synonyms":[{"name":"(2R)-2-hexadecanoylamino-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanamido-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-hexadecanoylamino-3-mercaptopropanoic acid","type":"exact"},{"name":"LIPID N-palmitoyl cysteine","type":"exact"},{"name":"N-(1-oxahexadecyl)-L-cysteine","type":"exact"},{"name":"N-hexadecanoylated L-cysteine","type":"exact"},{"name":"N-palmitoyl-L-cysteine","type":"exact"},{"name":"N-palmitoylated L-cysteine","type":"exact"},{"name":"NPamCys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"}],"termid":"MOD:00069"}


id: GO:0033691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sialic acid, a N- or O- substituted derivative of neuraminic acid, a nine carbon monosaccharide. Sialic acids often occur in polysaccharides, glycoproteins, and glycolipids in animals and bacteria.","definition_xrefs":["GOC:add","ISBN:9780721601465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sialic acid binding","synonyms":[{"name":"N-acetylneuraminic acid binding","type":"narrow"}],"termid":"GO:0033691"}


id: PBO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 192","termid":"PBO:0042120"}


id: PBO:0030243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_water_deprivation","termid":"PBO:0030243"}


id: FYPO:0000768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valinomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to valinomycin","synonyms":[{"name":"resistance to valinomycin during mitotic cell cycle","type":"related"},{"name":"resistance to valinomycin during vegetative growth","type":"exact"},{"name":"resistant to valinomycin","type":"exact"}],"termid":"FYPO:0000768"}


id: GO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a Langerhans cell.","definition_xrefs":["GOC:dph","PMID:22729249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell differentiation","termid":"GO:0043011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Langerhans cell differentiation","termid":"GO:0061520"}


id: GO:0034936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,6-dichloro-3-methylcatechol + O2 = 3,5-dichloro-3-methyl-cis,cis-muconate + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0959"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,6-dichloro-3-methylcatechol 1,2-dioxygenase activity (obsolete GO:0034936)","termid":"GO:0034936"}


id: GO:0035022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rac protein signal transduction","termid":"GO:0035020"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rac protein signal transduction","termid":"GO:0016601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Rac protein signal transduction","synonyms":[{"name":"activation of Rac protein signal transduction","type":"narrow"},{"name":"stimulation of Rac protein signal transduction","type":"narrow"},{"name":"up regulation of Rac protein signal transduction","type":"exact"},{"name":"up-regulation of Rac protein signal transduction","type":"exact"},{"name":"upregulation of Rac protein signal transduction","type":"exact"}],"termid":"GO:0035022"}


id: PBO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0000728"}


id: GO:0106229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutaryl-CoA + histone = CoA + H+ + N6-glutaryl-histone.","definition_xrefs":["GOC:sp","PMID:31542297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide glutaryltransferase activity","termid":"GO:0106228"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone glutaryltransferase activity","termid":"GO:0106229"}


id: PBO:0042935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC glutathione specific gamma-glutamylcyclotransferase 1","termid":"PBO:0042935"}


id: FYPO:0008337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' ends of non-polyadenylated RNA molecules occurs to a lower extent than normal.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased 3' end uridylation of non-polyadenylated RNA","termid":"FYPO:0008337"}


id: PBO:0111809
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0111809"}


id: PBO:0085354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid translocase (flippase); involved in generating phospholipid asymmetry in the plasma membrane; involved in endocytosis, vacuolar biogenesis and Golgi-to-ER vesicle-mediated transport; localizes to endosomes and the Golgi apparatus","termid":"PBO:0085354"}


id: GO:0099017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which localization of a protein is maintained at the cell tip.","definition_xrefs":["GOC:dos","GOC:vw","PMID:12894167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein localization at cell tip","synonyms":[{"name":"maintenance of protein location at cell tip","type":"exact"}],"termid":"GO:0099017"}


id: FYPO:0009071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to itraconazole. Cells stop growing (and may die) at a concentration of itraconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to itraconazole","synonyms":[{"name":"hypersensitive to itraconazole","type":"exact"},{"name":"sensitive to itraconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to itraconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0009071"}


id: GO:0032457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of membrane-bounded vesicles from peripheral endocytic compartments back to the plasma membrane where they are recycled for further rounds of transport.","definition_xrefs":["GOC:ecd","PMID:16473635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"fast endocytic recycling","synonyms":[{"name":"direct endocytic recycling","type":"exact"}],"termid":"GO:0032457"}


id: PBO:0038638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 4","termid":"PBO:0038638"}


id: PR:Q9P7H2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rex3 gene.","definition_xrefs":["UniProtKB:Q9P7H2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.08c","synonyms":[{"name":"Spom972h-rex3","type":"exact"}],"termid":"PR:Q9P7H2"}


id: GO:0042069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catecholamines.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine metabolic process","synonyms":[{"name":"regulation of catecholamine metabolism","type":"exact"}],"termid":"GO:0042069"}


id: GO:0046917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 3-dephospho-CoA = 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA + adenine.","definition_xrefs":["EC:2.4.2.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"triphosphoribosyl-dephospho-CoA synthase activity","secondary_identifiers":["MetaCyc:2.7.8.25-RXN","RHEA:15117"],"synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3-dephospho-CoA synthase activity","type":"related"},{"name":"ATP:3-dephospho-CoA 5''-triphosphoribosyltransferase activity","type":"exact"},{"name":"ATP:dephospho-CoA 5-triphosphoribosyl transferase activity","type":"exact"},{"name":"CitG activity","type":"related"}],"termid":"GO:0046917"}


id: PBO:0053116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 2","termid":"PBO:0053116"}


id: PBO:0088493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane trafficking protein, ER to Golgi Psg1","termid":"PBO:0088493"}


id: GO:0003697
data:
  {"annotated_genes":["SJAG_01762","SJAG_01436","SJAG_00796","SJAG_04995","SJAG_04418","SJAG_00327","SJAG_03832","SJAG_02267","SJAG_04863","SJAG_02503","SJAG_03436","SJAG_03682","SJAG_04933","SJAG_04574","SJAG_01049","SJAG_00857","SJAG_01887","SJAG_02348","SJAG_00619","SJAG_04245","SJAG_04156","SJAG_01708","SJAG_01410","SJAG_00399","SJAG_00768","SJAG_02627","SJAG_03495","SJAG_04210","SJAG_00939","SJAG_01076","SJAG_02556","SJAG_03855","SJAG_02079","SJAG_04410","SJAG_03780","SJAG_02822","SJAG_01677","SJAG_02194","SJAG_02545","SJAG_05214","SJAG_02362","SJAG_02828","SJAG_01771","SJAG_04530","SJAG_01354","SJAG_03886","SJAG_01698","SJAG_02031","SJAG_05239","SJAG_00871","SJAG_02667","SJAG_00757","SJAG_03068","SJAG_00884","SJAG_03161","SJAG_03722","SJAG_03957","SJAG_00819"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64549,65995,66074,66519,66878,66910,71606,71906,72647,73673,73835,73997,74344,74413,75091,75130,75550,76420,76457,76547,76619,76798,76958,77355,77472,78723,78892,79079,79968,80973,91485,91581,98033,107137,109482,110908,112326,113315,113888,114256,115409,116490,118098,118375,118658,120048],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[117757,115229,104981,114366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[78739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[64202,81980,81918,97851,109937,112199,113366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA.","definition_xrefs":["GOC:vw","PMID:22976174","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":58,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00399":null,"SJAG_00619":null,"SJAG_00757":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00819":null,"SJAG_00857":null,"SJAG_00871":null,"SJAG_00884":null,"SJAG_00939":null,"SJAG_01049":null,"SJAG_01076":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01436":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01771":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02079":null,"SJAG_02194":null,"SJAG_02267":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02503":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03068":null,"SJAG_03161":null,"SJAG_03436":null,"SJAG_03495":null,"SJAG_03682":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03832":null,"SJAG_03855":null,"SJAG_03886":null,"SJAG_03957":null,"SJAG_04156":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04410":null,"SJAG_04418":null,"SJAG_04530":null,"SJAG_04574":null,"SJAG_04863":null,"SJAG_04933":null,"SJAG_04995":null,"SJAG_05214":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"single-stranded DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0003698","GO:0003699"],"synonyms":[{"name":"ssDNA binding","type":"exact"}],"termid":"GO:0003697","terms_by_termid":{"GO:0003697":null,"GO:0043047":null,"GO:0098505":null,"GO:1990814":null}}


id: PBO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dopey family protein (predicted)","termid":"PBO:0000402"}


id: MOD:01293
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartic acid with one (18)O.","definition_xrefs":["OMSSA:139","PubMed:8382902","Unimod:366#N"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"deamidated L-asparagine","termid":"MOD:00684"},{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated L-asparagine","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"},{"name":"oxy18","type":"exact"}],"termid":"MOD:01293"}


id: GO:1904770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an intramembranous bone is generated and organized.","definition_xrefs":["GOC:TermGenie","GO_REF:0000083","PMID:26399686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous bone morphogenesis","synonyms":[{"name":"intramembranous bones morphogenesis","type":"related"},{"name":"membrane bone morphogenesis","type":"related"}],"termid":"GO:1904770"}


id: FYPO:0003310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which IMP cyclohydrolase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal IMP cyclohydrolase activity","termid":"FYPO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished IMP cyclohydrolase activity","synonyms":[{"name":"IMP cyclohydrolase activity abolished","type":"exact"}],"termid":"FYPO:0003310"}


id: PBO:0064047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 81","termid":"PBO:0064047"}


id: FYPO:0006192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, has no septum, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000032","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"normal volume aseptate spheroid vegetative cell","synonyms":[{"name":"normal volume aseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006192"}


id: PBO:0051798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing N","termid":"PBO:0051798"}


id: PBO:0116974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADORA1 antisense RNA 2","termid":"PBO:0116974"}


id: PBO:0043613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 4 pseudogene 1","termid":"PBO:0043613"}


id: PBO:0065414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 3","termid":"PBO:0065414"}


id: PBO:0054487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1887","termid":"PBO:0054487"}


id: PBO:0072568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras responsive element binding protein 1","termid":"PBO:0072568"}


id: PBO:0057059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 143","termid":"PBO:0057059"}


id: MONDO:0013582
data:
  {"annotated_genes":["SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87664],"is_not":false,"summary":null,"term":"MONDO:0013582"}]},"cv_name":"mondo","definition":"Any mosaic variegated aneuploidy syndrome in which the cause of the disease is a mutation in the CEP57 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mosaic variegated aneuploidy syndrome","termid":"MONDO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02795":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614114","UMLS:C3279843","GARD:15758","NCIT:C168989","DOID:0080142","MEDGEN:481473"],"synonyms":[{"name":"CEP57 mosaic variegated aneuploidy syndrome","type":"exact"},{"name":"MOSAIC variegated aneuploidy syndrome 2","type":"related"},{"name":"MVA2","type":"related"},{"name":"Mosaic variegated aneuploidy syndrome type 2","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome 2","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome caused by mutation in CEP57","type":"exact"},{"name":"mosaic variegated aneuploidy syndrome type 2","type":"exact"}],"termid":"MONDO:0013582","terms_by_termid":{"MONDO:0013582":null},"xrefs":{"Monarch":{"xref_id":"0013582"}}}


id: MONDO:0013149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrops fetalis, nonimmune, with gracile bones and dysmorphic features","secondary_identifiers":["MEDGEN:1677588","MESH:C567731","OMIM:613124","UMLS:C5193233"],"synonyms":[{"name":"hydrops fetalis, nonimmune, with gracile bones and dysmorphic features","type":"exact"}],"termid":"MONDO:0013149","xrefs":{"Monarch":{"xref_id":"0013149"}}}


id: PBO:0081713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 638","termid":"PBO:0081713"}


id: PBO:0070538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 4","termid":"PBO:0070538"}


id: PBO:0063850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 3","termid":"PBO:0063850"}


id: PBO:0050713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA (Hsp70) binding protein 1","termid":"PBO:0050713"}


id: GO:1903948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of atrial cardiac muscle cell action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:nc","GO_REF:0000058","GOC:TermGenie","PMID:25281747","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"},{"relation_name":"negatively_regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of atrial cardiac muscle cell action potential","synonyms":[{"name":"down regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of atrial cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1903948"}


id: GO:0033894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing 3'-extranucleotides from tRNA precursor.","definition_xrefs":["EC:3.1.26.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribonuclease P4 activity","secondary_identifiers":["MetaCyc:3.1.26.7-RXN"],"termid":"GO:0033894"}


id: GO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by removal of a single nucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide deletion","synonyms":[{"name":"RNA nucleotide excision","type":"exact"}],"termid":"GO:0070706"}


id: MONDO:0014970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the PLCZ1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 17","secondary_identifiers":["DOID:0070174","MEDGEN:934633","OMIM:617214","UMLS:C4310666"],"synonyms":[{"name":"Male infertility due to oocyte Activation failure","type":"related"},{"name":"PLCZ1 azoospermia","type":"exact"},{"name":"SPGF17","type":"exact"},{"name":"azoospermia caused by mutation in PLCZ1","type":"exact"},{"name":"spermatogenic failure 17","type":"exact"},{"name":"spermatogenic failure 17; SPGF17","type":"exact"},{"name":"spermatogenic failure type 17","type":"exact"}],"termid":"MONDO:0014970","xrefs":{"Monarch":{"xref_id":"0014970"}}}


id: PBO:0049456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 1","termid":"PBO:0049456"}


id: GO:0090123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The polysaccharide-based coating on the inner side of a lysosomal membrane. It may be involved in protecting the membrane from digestion by lysosomal enzymes.","definition_xrefs":["PMID:29367433","PMID:10521503","GOC:ascb_2009","GOC:dph","GOC:krc","PMID:22809326","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lysosomal glycocalyx","termid":"GO:0090123"}


id: MONDO:0004707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a anal canal.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum carcinoma in situ","termid":"MONDO:0004725"},{"relation_name":"is_a","term_name":"anal canal carcinoma","termid":"MONDO:0007108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal canal carcinoma in situ","secondary_identifiers":["UMLS:C2242854","NCIT:C7794","SCTID:92531006","ICD9:230.5","MEDGEN:412201","DOID:9087","ICD9:230.6"],"synonyms":[{"name":"anal canal in situ carcinoma","type":"exact"},{"name":"anal carcinoma in situ","type":"related"},{"name":"anal carcinoma stage 0","type":"exact"},{"name":"anal intraepithelial neoplasia grade III","type":"exact"},{"name":"carcinoma in situ of anal canal","type":"exact"},{"name":"carcinoma in situ of anus","type":"exact"},{"name":"stage 0 anal canal cancer","type":"exact"},{"name":"stage 0 anal canal cancer aJCC v6","type":"exact"},{"name":"stage 0 anal canal cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 anal canal cancer aJCC v7","type":"exact"},{"name":"stage 0 anal canal carcinoma","type":"exact"},{"name":"stage 0 anal canal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 anal carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 anal carcinoma in situ","type":"exact"}],"termid":"MONDO:0004707","xrefs":{"Monarch":{"xref_id":"0004707"}}}


id: GO:0046555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the deacetylation of xylans and xylo-oligosaccharides.","definition_xrefs":["EC:3.1.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"acetylxylan esterase activity","secondary_identifiers":["MetaCyc:3.1.1.72-RXN"],"termid":"GO:0046555"}


id: PBO:0061874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP pseudogene 1","termid":"PBO:0061874"}


id: PR:000044700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is monomethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00085.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-monomethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me1","type":"exact"}],"termid":"PR:000044700"}


id: PBO:0075712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 1","termid":"PBO:0075712"}


id: PBO:0090246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein, implicated in tRNA metabolism (possible RNA binding domain associated with tRNA methyltransferases)","termid":"PBO:0090246"}


id: GO:0052349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of reactive oxygen species as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont reactive oxygen species production (obsolete GO:0052349)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont AOS production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont ROI production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont ROS production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont active oxygen species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont metabolic burst","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont oxidative burst","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxidative species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxygen intermediate production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont reactive oxygen species production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont respiratory burst","type":"exact"}],"termid":"GO:0052349"}


id: GO:1990384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the hyaloid vascular plexus is destroyed as a part of its normal progression.","definition_xrefs":["GOC:hjd","PMID:18841878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure regression","termid":"GO:0060033"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyaloid vascular plexus regression","termid":"GO:1990384"}


id: GO:0052692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: raffinose + H2O = alpha-D-galactose + sucrose.","definition_xrefs":["PMID:20739305","RHEA:70275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-galactosidase activity","termid":"GO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"raffinose alpha-galactosidase activity","secondary_identifiers":["KEGG_REACTION:R01103","MetaCyc:RXN-11502"],"synonyms":[{"name":"alkaline alpha-galactosidase activity","type":"broad"},{"name":"raffinose galactohydrolase activity","type":"broad"},{"name":"raffinose-specific alkaline alpha-galactosidase activity","type":"exact"}],"termid":"GO:0052692"}


id: PBO:0003976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol metabolism protein Opi10 (predicted)","termid":"PBO:0003976"}


id: PBO:0018063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Pet117 (predicted)","termid":"PBO:0018063"}


id: GO:0050136
data:
  {"annotated_genes":["SJAG_04152","SJAG_01539"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98502,114695],"is_not":false,"summary":null,"term":"GO:0050136"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + a quinone = NAD+ + a quinol.","definition_xrefs":["RHEA:46160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase activity","termid":"GO:0003954"},{"relation_name":"is_a","term_name":"NAD(P)H dehydrogenase (quinone) activity","termid":"GO:0003955"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01539":null,"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"NADH dehydrogenase (quinone) (non-electrogenic) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.6.99.5-RXN","EC:1.6.5.9"],"synonyms":[{"name":"NADH dehydrogenase (quinone) activity","type":"related"},{"name":"NADH:ubiquinone reductase (non-electrogenic) activity","type":"narrow"}],"termid":"GO:0050136","terms_by_termid":{"GO:0050136":null}}


id: PBO:0003855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial manganese ion transporter (predicted)","termid":"PBO:0003855"}


id: MONDO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive axial myopia associated with complications (especially posterior staphyloma and choroidal neovascularization) that can lead to blindness.","definition_xrefs":["MESH:D047728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"degenerative myopia","secondary_identifiers":["ICD9:360.21","UMLS:C0154778","DOID:11829","MEDGEN:57597","ICD10CM:H44.2","SCTID:32022003"],"synonyms":[{"name":"degenerative progressive high myopia","type":"exact"},{"name":"pathological myopia","type":"exact"},{"name":"progressive high (degenerative) myopia","type":"exact"},{"name":"progressive high myopia","type":"exact"}],"termid":"MONDO:0001383","xrefs":{"Monarch":{"xref_id":"0001383"}}}


id: GO:0016486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"peptide hormone processing","secondary_identifiers":["Reactome:R-HSA-422085","Reactome:R-HSA-209952","Reactome:R-HSA-400508"],"termid":"GO:0016486"}


id: PBO:0079465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23C pseudogene 1","termid":"PBO:0079465"}


id: GO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zygosporangium development","termid":"GO:0075272"}


id: MONDO:0004830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation process in fascia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciitis","secondary_identifiers":["HP:0100537","NCIT:C50559","MEDGEN:4658","UMLS:C0015645","MESH:D005208","DOID:9598","SCTID:36948007","ICD9:729.4"],"synonyms":[{"name":"Fascitis","type":"exact"},{"name":"fascia inflammation","type":"exact"},{"name":"fasciitis","type":"exact"},{"name":"fasciitis (disease)","type":"exact"},{"name":"inflammation of fascia","type":"exact"}],"termid":"MONDO:0004830","xrefs":{"Monarch":{"xref_id":"0004830"}}}


id: MONDO:0017428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital deformities of fingers (obsolete MONDO:0017428)","secondary_identifiers":["Orphanet:294947"],"termid":"MONDO:0017428","xrefs":{"Monarch":{"xref_id":"0017428"}}}


id: GO:0031348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response","synonyms":[{"name":"down regulation of defense response","type":"exact"},{"name":"down-regulation of defense response","type":"exact"},{"name":"downregulation of defense response","type":"exact"},{"name":"inhibition of defense response","type":"narrow"}],"termid":"GO:0031348"}


id: PBO:0030064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphoglycerate_mutase_activity","termid":"PBO:0030064"}


id: MONDO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloproliferative neoplasm (obsolete MONDO:0002248)","termid":"MONDO:0002248","xrefs":{"Monarch":{"xref_id":"0002248"}}}


id: PBO:0048321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 32","termid":"PBO:0048321"}


id: RO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite of in which a parasite steals resources from another organism, usually food or nest material","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kleptoparasite_of","termid":"RO:0008503"}


id: GO:2000524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of T cell costimulation","termid":"GO:2000523"},{"relation_name":"negatively_regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell costimulation","synonyms":[{"name":"negative regulation of T cell co-stimulation","type":"exact"},{"name":"negative regulation of T lymphocyte costimulation","type":"exact"},{"name":"negative regulation of T-cell co-stimulation","type":"exact"},{"name":"negative regulation of T-cell costimulation","type":"exact"},{"name":"negative regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000524"}


id: PBO:0029161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resistance_to_chemical","termid":"PBO:0029161"}


id: PBO:0017717
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pol1 promoter region contains 5 near matches to the MluI cell cycle box (MCB) consensus sequence","termid":"PBO:0017717"}


id: PBO:0085228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of evolutionarily-conserved CCR4-NOT regulatory complex; contains single ABC-type ATPase domain but no transmembrane domain; interacts with several subunits of Mediator","termid":"PBO:0085228"}


id: FYPO:0007037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phenylglyoxal. Cells stop growing (and may die) at a concentration of phenylglyoxal that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to phenylglyoxal","synonyms":[{"name":"hypersensitive to phenylglyoxal","type":"exact"},{"name":"sensitive to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"sensitive to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"sensitive to phenylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0007037"}


id: MONDO:0030064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia, type 9","secondary_identifiers":["UMLS:C5394520","OMIM:618924","MEDGEN:1714171","DOID:0060965"],"synonyms":[{"name":"EA9","type":"exact"},{"name":"EPISODIC ATAXIA, TYPE 9","type":"exact"},{"name":"episodic ataxia, type 9","type":"exact"}],"termid":"MONDO:0030064","xrefs":{"Monarch":{"xref_id":"0030064"}}}


id: PBO:0058131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4432 host gene","termid":"PBO:0058131"}


id: GO:1905881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26434723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of oogenesis","termid":"GO:1905879"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oogenesis","synonyms":[{"name":"activation of oogenesis","type":"narrow"},{"name":"activation of ovum development","type":"narrow"},{"name":"positive regulation of ovum development","type":"exact"},{"name":"up regulation of oogenesis","type":"exact"},{"name":"up regulation of ovum development","type":"exact"},{"name":"up-regulation of oogenesis","type":"exact"},{"name":"up-regulation of ovum development","type":"exact"},{"name":"upregulation of oogenesis","type":"exact"},{"name":"upregulation of ovum development","type":"exact"}],"termid":"GO:1905881"}


id: PBO:0087262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein phosphatase Z, isoform of Ppz1p; involved in regulation of potassium transport, which affects osmotic stability, cell cycle progression, and halotolerance","termid":"PBO:0087262"}


id: GO:0160168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=9 symmetry. The T=9 capsid is composed of 12 pentameric and 80 hexameric capsomeres.","definition_xrefs":["PMID:37138077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=9 icosahedral viral capsid","secondary_identifiers":["VZ:5316"],"termid":"GO:0160168"}


id: PBO:0076339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 7","termid":"PBO:0076339"}


id: GO:0033115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a cyanelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid membrane","termid":"GO:0055035"},{"relation_name":"part_of","term_name":"cyanelle thylakoid","termid":"GO:0009843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle thylakoid membrane","termid":"GO:0033115"}


id: PBO:0040915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 19","termid":"PBO:0040915"}


id: MONDO:0017757
data:
  {"annotated_genes":["SJAG_01466","SJAG_04077","SJAG_03371","SJAG_00379","SJAG_03447","SJAG_02399","SJAG_03596","SJAG_02117","SJAG_04042","SJAG_01199","SJAG_00835","SJAG_01007","SJAG_04425","SJAG_01616","SJAG_04260","SJAG_03362","SJAG_04459","SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011790"},{"annotations":[88390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013761"},{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011417"},{"annotations":[87076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87006,87007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[88504,88503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011174"},{"annotations":[87328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[86924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012251"},{"annotations":[87186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010651"},{"annotations":[86983,86984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"},{"annotations":[87844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032705"},{"annotations":[88858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[88788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013382"},{"annotations":[87166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[88899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010200"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_00835":null,"SJAG_01007":null,"SJAG_01199":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_02117":null,"SJAG_02399":null,"SJAG_03362":null,"SJAG_03371":null,"SJAG_03447":null,"SJAG_03596":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04077":null,"SJAG_04260":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of metabolite absorption and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21349","Orphanet:309824","UMLS:C5681033","MEDGEN:1842202"],"termid":"MONDO:0017757","terms_by_termid":{"MONDO:0008787":null,"MONDO:0009238":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null,"MONDO:0010200":null,"MONDO:0010572":null,"MONDO:0010651":null,"MONDO:0011174":null,"MONDO:0011417":null,"MONDO:0011790":null,"MONDO:0012251":null,"MONDO:0013382":null,"MONDO:0013761":null,"MONDO:0032705":null,"MONDO:0044726":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0017757"}}}


id: MONDO:0032703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, amelogenesis imperfecta, and skeletal dysplasia with scoliosis","secondary_identifiers":["UMLS:C5193055","MEDGEN:1676818","OMIM:618363"],"synonyms":[{"name":"SHORT STATURE, AMELOGENESIS IMPERFECTA, AND SKELETAL DYSPLASIA WITH SCOLIOSIS","type":"related"},{"name":"SSASKS","type":"related"}],"termid":"MONDO:0032703","xrefs":{"Monarch":{"xref_id":"0032703"}}}


id: PBO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor (predicted)","termid":"PBO:0005436"}


id: PBO:0035985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_neddylation_during_vegetative_growth","termid":"PBO:0035985"}


id: PBO:0078560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 48","termid":"PBO:0078560"}


id: GO:0036448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the accumulation of glucose-phosphate.","definition_xrefs":["PMID:17383224","GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to sugar-phosphate stress","termid":"GO:0036447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose-phosphate stress","termid":"GO:0036448"}


id: FYPO:0000061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"multinucleate","termid":"FYPO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"multinucleate vegetative cell","synonyms":[{"name":"multinucleate cells during vegetative growth","type":"exact"},{"name":"multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"multiple nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0000061"}


id: GO:0007423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ development","synonyms":[{"name":"sense organ development","type":"exact"}],"termid":"GO:0007423"}


id: FYPO:0004920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a catalytic activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of molecular function","termid":"FYPO:0004919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal regulation of catalytic activity","synonyms":[{"name":"normal regulation of catalytic activity during mitotic cell cycle","type":"related"},{"name":"normal regulation of catalytic activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004920"}


id: GO:1903292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a Golgi membrane.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:11378902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to Golgi membrane","synonyms":[{"name":"protein localisation in Golgi membrane","type":"exact"},{"name":"protein localisation to Golgi membrane","type":"exact"},{"name":"protein localization in Golgi membrane","type":"exact"}],"termid":"GO:1903292"}


id: PBO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_division_site","termid":"PBO:0030017"}


id: GO:0046150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanin metabolic process","termid":"GO:0006582"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"melanin catabolic process","synonyms":[{"name":"melanin breakdown","type":"exact"},{"name":"melanin catabolism","type":"exact"},{"name":"melanin degradation","type":"exact"}],"termid":"GO:0046150"}


id: PBO:0059259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL23 antisense RNA 1","termid":"PBO:0059259"}


id: PATO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown and green hues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown green","synonyms":[{"name":"olive green","type":"exact"}],"termid":"PATO:0001942"}


id: PBO:0056038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 3","termid":"PBO:0056038"}


id: PBO:0076827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase associated protein 1","termid":"PBO:0076827"}


id: GO:0031535
data:
  {"annotated_genes":["SJAG_01613","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101018],"is_not":false,"summary":null,"term":"GO:0031535"},{"annotations":[103240],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"The movement of one microtubule along another microtubule, where the motion is directed towards the plus ends of the microtubules.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule sliding","termid":"GO:0051012"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031535","terms_by_termid":{"GO:0031535":null,"GO:0062168":null}}


id: PBO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex sigma subunit Aps1","termid":"PBO:0001075"}


id: PBO:0042784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 128","termid":"PBO:0042784"}


id: GO:0003429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte in the growth plate cartilage are generated and organized.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte morphogenesis involved in endochondral bone morphogenesis","termid":"GO:0003414"},{"relation_name":"is_a","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte morphogenesis","termid":"GO:0003429"}


id: SO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_C_cluster","synonyms":[{"name":"V D DJ C cluster","type":"exact"},{"name":"V-D-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000527"}


id: PBO:0075333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 2","termid":"PBO:0075333"}


id: GO:0061815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ubiquitin units from Met1-linked (or linear) polyubiquitin chains.","definition_xrefs":["PMID:27702987","GOC:dph","PMID:26503766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type deubiquitinase activity","termid":"GO:0004843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0003824","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"Met1-linked polyubiquitin deubiquitinase activity","secondary_identifiers":["Reactome:R-HSA-9818975"],"synonyms":[{"name":"Met1 linkage specific DUB","type":"exact"},{"name":"cysteine-type deubiquitinase activity, acting on linear ubiquitin","type":"exact"},{"name":"deubiquitinase, acting on linear ubiquitin","type":"broad"},{"name":"linear ubiquitin specific deubiquitinase activity","type":"exact"},{"name":"ubiquitinyl hydrolase activity, acting on linear ubiquitin","type":"exact"}],"termid":"GO:0061815"}


id: MONDO:0005203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adverse functional, metabolic, or structural changes in ischemic tissues resulting from the restoration of blood flow to the tissue (reperfusion), including swelling; hemorrhage; necrosis; and damage from free radicals. The most common instance is myocardial reperfusion injury.","definition_xrefs":["MESH:D015427"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ischemia reperfusion injury","secondary_identifiers":["EFO:0002687","PMID:10685060"],"termid":"MONDO:0005203","xrefs":{"Monarch":{"xref_id":"0005203"}}}


id: PBO:0088652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transporter-like, implicated in autophagy Ctl1","termid":"PBO:0088652"}


id: FYPO:0000075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of lovastatin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to lovastatin","synonyms":[{"name":"resistance to lovastatin during mitotic cell cycle","type":"related"},{"name":"resistance to lovastatin during vegetative growth","type":"exact"},{"name":"resistant to lovastatin","type":"exact"}],"termid":"FYPO:0000075"}


id: PBO:0065315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 38","termid":"PBO:0065315"}


id: MONDO:0010110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetraamelia - multiple malformations is an extremely rare mostly lethal congenital disorder characterized by absence of all four limbs and frequent associated major malformations involving the head, face, eyes, skeleton, heart, lungs, anus, urogenital, and central nervous systems. The syndrome has been described in fewer than 20 patients mainly of middle Eastern descent.","definition_xrefs":["Orphanet:3301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tetraamelia-multiple malformations syndrome","secondary_identifiers":["UMLS:C2931218","GARD:386","SCTID:716249009","MESH:C536500","DOID:0112191","OMIMPS:273395","MEDGEN:419746"],"synonyms":[{"name":"TETAMS","type":"related"},{"name":"TETRAAMELIA syndrome, autosomal recessive","type":"related"},{"name":"Tetraamelia multiple malformations X-linked","type":"related"},{"name":"Zimmer Taub Sova syndrome","type":"related"},{"name":"Zimmer phocomelia","type":"exact"}],"termid":"MONDO:0010110","xrefs":{"Monarch":{"xref_id":"0010110"}}}


id: PBO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCCTC-binding factor","termid":"PBO:0044148"}


id: FYPO:0006264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation is decreased at the telomeric regions during anaphase B. The remainder of the sister chromatids may or may not separate normally.","definition_xrefs":["PomBase:mah","PMID:21540296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomeric DNA separation","termid":"FYPO:0005442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased telomeric DNA separation during anaphase B","synonyms":[{"name":"decreased DNA separation at telomere during anaphase B","type":"exact"},{"name":"decreased mitotic sister chromatid separation at telomere during anaphase B","type":"exact"},{"name":"decreased mitotic telomeric DNA separation during anaphase B","type":"exact"},{"name":"decreased segregation of telomeric DNA during anaphase B","type":"related"},{"name":"decreased telomere disjunction during anaphase B","type":"exact"},{"name":"decreased telomere separation during anaphase B","type":"exact"},{"name":"decreased telomeric DNA separation during anaphase B during mitotic cell cycle","type":"related"},{"name":"decreased telomeric DNA separation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased telomeric DNA separation during anaphase B of mitosis","type":"exact"},{"name":"increased sister chromatid telomere nondisjunction at anaphase B","type":"exact"},{"name":"increased taz1 foci at anaphase B","type":"related"},{"name":"reduced telomeric DNA separation during anaphase B","type":"related"}],"termid":"FYPO:0006264"}


id: PBO:0078958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-1","termid":"PBO:0078958"}


id: PBO:0054184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1559","termid":"PBO:0054184"}


id: GO:1900342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"}


id: PBO:0091388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Rrg9","termid":"PBO:0091388"}


id: PBO:0079949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 3","termid":"PBO:0079949"}


id: PBO:0040524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antizyme inhibitor 1","termid":"PBO:0040524"}


id: PBO:0046945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member B","termid":"PBO:0046945"}


id: GO:0070720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the receptor adaptor proteins Grb2 and SHP-2, and is involved signaling via the PDGFR signaling pathway.","definition_xrefs":["PMID:8943348","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"Grb2-SHP-2 complex","synonyms":[{"name":"GRB2-SHP-2 complex, PDGF stimulated","type":"narrow"}],"termid":"GO:0070720"}


id: FYECO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which queuosine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ queuosine","termid":"FYECO:0000299"}


id: MONDO:0000512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ameloblastoma (obsolete MONDO:0000512)","termid":"MONDO:0000512","xrefs":{"Monarch":{"xref_id":"0000512"}}}


id: PBO:0041322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 74","termid":"PBO:0041322"}


id: PBO:0068508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 97, pseudogene","termid":"PBO:0068508"}


id: PBO:0035838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_to_cell_tip_during_vegetative_growth","termid":"PBO:0035838"}


id: MONDO:0008251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare chronic papulosquamous disorder of unknown etiology characterized by small follicular papules, scaly red-orange patches, and palmoplantar hyperkeratosis, which may progress to plaques or erythroderma. Although most of the cases are sporadic and acquired, a familial form of the disease exists.","definition_xrefs":["Orphanet:2897"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"excluded_subClassOf","term_name":"exanthem","termid":"MONDO:0006547"},{"relation_name":"excluded_subClassOf","term_name":"erythrokeratoderma","termid":"MONDO:0019270"},{"relation_name":"is_a","term_name":"pityriasis rubra pilaris","termid":"MONDO:0100017"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial pityriasis rubra pilaris","secondary_identifiers":["UMLS:C2930842","OMIM:173200","MedDRA:10035116","MEDGEN:443914","MESH:C531784","ICD9:696.4"],"synonyms":[{"name":"Devergie's disease","type":"exact"},{"name":"PRP","type":"exact"},{"name":"hereditary pityriasis rubra pilaris","type":"exact"},{"name":"pityriasis rubra pilaris","type":"broad"},{"name":"pityriasis rubra pilaris--familial type","type":"exact"}],"termid":"MONDO:0008251","xrefs":{"Monarch":{"xref_id":"0008251"}}}


id: GO:1905274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of postsynaptic actin cytoskeleton.","definition_xrefs":["PMID:21068295","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of modification of postsynaptic structure","termid":"GO:0099159"},{"relation_name":"regulates","term_name":"modification of postsynaptic actin cytoskeleton","termid":"GO:0098885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of postsynaptic actin cytoskeleton","synonyms":[{"name":"regulation of postsynaptic actin cytoskeleton remodelling","type":"exact"}],"termid":"GO:1905274"}


id: GO:0006615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an SRP-bound ribosome forms a complex with the SRP receptor in the ER membrane, allowing the ribosome to bind to the membrane, during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein to membrane docking","termid":"GO:0022615"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, docking","synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, docking","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, docking","type":"exact"},{"name":"protein docking during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006615"}


id: PBO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 4","termid":"PBO:0061486"}


id: PR:O94284
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sulfide:quinone oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10632:SF0","OMA:SCHPO03338","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide:quinone oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.06c","secondary_identifiers":["UniProtKB:O94284"],"synonyms":[{"name":"Spom972h-SQRDL","type":"exact"},{"name":"cadmium resistance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heavy metal tolerance protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94284"}


id: PATO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having an open, latticed, or porous structure; used especially of bone.","definition_xrefs":["TheFreeDictionary:cancellous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancellous","termid":"PATO:0002519"}


id: PBO:0031743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_invasive_growth_(obsolete_FYPO:0000466)","termid":"PBO:0031743"}


id: PBO:0051745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 11","termid":"PBO:0051745"}


id: PBO:0042773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 83","termid":"PBO:0042773"}


id: FYPO:0006913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ketoconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on ketoconazole","synonyms":[{"name":"normal cell population growth in presence of ketoconazole","type":"exact"},{"name":"normal cell population growth on ketoconazole","type":"exact"},{"name":"normal cellular response to ketoconazole","type":"related"},{"name":"normal vegetative cell population growth on ketoconazole","type":"exact"}],"termid":"FYPO:0006913"}


id: PBO:0059414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36","termid":"PBO:0059414"}


id: GO:0099164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization of a symmetric synapse. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization membrane of symmetric synapse","termid":"GO:0099164"}


id: PATO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000216 heart rate (obsolete PATO:0000216)","termid":"PATO:0000216"}


id: GO:1903633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:2280766"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of leucine-tRNA ligase activity (obsolete GO:1903633)","synonyms":[{"name":"regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"regulation of leucine translase activity","type":"exact"},{"name":"regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903633"}


id: GO:0070354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the zinc finger transcription factor GATA2, the LIM domain protein Lmo2 (RBTN2), the basic helix-loop-helix protein TAL1 and its binding partner TCF3. The complex is involved transcriptional regulation in hematopoiesis.","definition_xrefs":["PMID:7568177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GATA2-TAL1-TCF3-Lmo2 complex","termid":"GO:0070354"}


id: PBO:0063405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 1","termid":"PBO:0063405"}


id: PBO:0074757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 116","termid":"PBO:0074757"}


id: PBO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030671"}


id: MONDO:0004055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute inflammation of lacrimal passage","secondary_identifiers":["DOID:6970","MEDGEN:572973","ICD9:375.3","UMLS:C0339129","SCTID:302900006"],"termid":"MONDO:0004055","xrefs":{"Monarch":{"xref_id":"0004055"}}}


id: PBO:0072715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 2","termid":"PBO:0072715"}


id: PBO:0079785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A6","termid":"PBO:0079785"}


id: GO:0071031
data:
  {"annotated_genes":["SJAG_02622","SJAG_03984","SJAG_04006","SJAG_00961","SJAG_03179"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71951,76273,95216,99022,119970],"is_not":false,"summary":null,"term":"GO:0071031"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading mRNAs with incorrectly formed 3'-ends within the nucleus.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:18644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00961":null,"SJAG_02622":null,"SJAG_03179":null,"SJAG_03984":null,"SJAG_04006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear mRNA surveillance of mRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA catabolic process of mRNA with aberrant 3'-ends","type":"exact"},{"name":"nuclear mRNA quality control of mRNAs with aberrant 3'-ends","type":"exact"}],"termid":"GO:0071031","terms_by_termid":{"GO:0071031":null}}


id: MONDO:0012372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features (obsolete MONDO:0012372)","termid":"MONDO:0012372","xrefs":{"Monarch":{"xref_id":"0012372"}}}


id: PBO:0083080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responds to stresses including heat, ethanol, and sodium arsenite; involved in [PSI+] propagation; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; potentiated Hsp104p variants decrease TDP-43 proteotoxicity by eliminating its cytoplasmic aggregation","termid":"PBO:0083080"}


id: MONDO:0001250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eye disorder that results from vitamin A deficiency, with basis in disruption of maintenance of the specialized epithelial surfaces, leading to atrophic changes in the normal mucosal surface, with loss of goblet cells, and replacement of the normal epithelium by an inappropriate keratinized stratified squamous epithelium. In addition, the substantia propria of the cornea breaks down and liquefies, resulting in keratomalacia.","definition_xrefs":["Wikipedia:Keratomalacia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratomalacia","secondary_identifiers":["DOID:11267","MEDGEN:57777","ICD9:371.45","MESH:C536156","ICD10CM:H18.44","UMLS:C0152455","icd11.foundation:497316188","SCTID:85149007"],"termid":"MONDO:0001250","xrefs":{"Monarch":{"xref_id":"0001250"}}}


id: PBO:0080543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 2","termid":"PBO:0080543"}


id: PBO:0040014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARMC2 antisense RNA 1","termid":"PBO:0040014"}


id: PBO:0064825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3G","termid":"PBO:0064825"}


id: MONDO:0008442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-neuropathy-poikiloderma syndrome is a complex form of hereditary spastic paraplegia characterized by spastic paraplegia, demyelinating peripheral sensorimotor neuropathy, poikiloderma (manifesting with loss of eyebrows and eyelashes in childhood in addition to delicate, smooth, and wasted skin) and distal amyotrophy (presenting after puberty). There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:2821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spastic paraplegia-neuropathy-poikiloderma syndrome","secondary_identifiers":["UMLS:C1866851","GARD:4921","OMIM:182815","MESH:C536870","MEDGEN:355814"],"synonyms":[{"name":"Antinolo-Nieto-Borrego syndrome","type":"exact"},{"name":"familial spastic paraplegia with neuropathy and poikiloderma","type":"related"},{"name":"spastic paraplegia neuropathy poikiloderma","type":"related"},{"name":"spastic paraplegia with neuropathy and poikiloderma","type":"related"}],"termid":"MONDO:0008442","xrefs":{"Monarch":{"xref_id":"0008442"}}}


id: PBO:0061962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 41 pseudogene","termid":"PBO:0061962"}


id: MONDO:0009771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculotrichodysplasia is characterized by retinitis pigmentosa, trichodysplasia, dental anomalies, and onychodysplasia. It has been described in two siblings (brother and sister) born to first cousin parents. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:2718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"oculotrichodysplasia","secondary_identifiers":["UMLS:C1850332","OMIM:257960","GARD:16607","MEDGEN:340517","icd11.foundation:1202969811","SCTID:722062004","MESH:C564934"],"synonyms":[{"name":"Cecato de Lima-Pinheiro syndrome","type":"exact"},{"name":"OTD","type":"related"},{"name":"oculotrichodysplasia","type":"exact"}],"termid":"MONDO:0009771","xrefs":{"Monarch":{"xref_id":"0009771"}}}


id: PBO:0072250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 25","termid":"PBO:0072250"}


id: PBO:0053269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LILRA2 pseudogene 1","termid":"PBO:0053269"}


id: PBO:0089222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family nonsense-mediated mRNA decay (NMD) pathway protein Ebs1","termid":"PBO:0089222"}


id: PBO:0054131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1497","termid":"PBO:0054131"}


id: MONDO:0004441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal carcinoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian embryonal carcinoma","termid":"MONDO:0003581"},{"relation_name":"is_a","term_name":"pediatric ovarian germ cell tumor","termid":"MONDO:0003760"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood ovarian embryonal carcinoma","secondary_identifiers":["DOID:8036","UMLS:C1332989","MEDGEN:232352","NCIT:C6546"],"synonyms":[{"name":"childhood embryonal carcinoma of ovary","type":"exact"},{"name":"childhood embryonal carcinoma of the ovary","type":"related"},{"name":"ovarian embryonal carcinoma of childhood","type":"exact"},{"name":"paediatric embryonal carcinoma of ovary","type":"exact"},{"name":"paediatric embryonal carcinoma of the ovary","type":"exact"},{"name":"paediatric ovarian embryonal carcinoma","type":"exact"},{"name":"pediatric embryonal carcinoma of ovary","type":"exact"},{"name":"pediatric embryonal carcinoma of the ovary","type":"exact"},{"name":"pediatric ovarian embryonal carcinoma","type":"exact"}],"termid":"MONDO:0004441","xrefs":{"Monarch":{"xref_id":"0004441"}}}


id: PATO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001122 absolute power value (obsolete PATO:0001122)","termid":"PATO:0001122"}


id: PBO:0005339
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.10","termid":"PBO:0005339"}


id: MONDO:0957786
data:
  {"annotated_genes":["SJAG_01433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87966],"is_not":false,"summary":null,"term":"MONDO:0957786"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01433":null},"genotype_count":0,"is_obsolete":false,"name":"xerosis and growth failure with immune and pulmonary dysfunction syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1848919","UMLS:C5882692","OMIM:620510"],"termid":"MONDO:0957786","terms_by_termid":{"MONDO:0957786":null},"xrefs":{"Monarch":{"xref_id":"0957786"}}}


id: PBO:0082816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal protein with similarity to zinc carboxypeptidases; in some strains required for normal cell wall assembly","termid":"PBO:0082816"}


id: PBO:0059613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 25","termid":"PBO:0059613"}


id: MONDO:0012870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2q31.2 deletion syndrome","secondary_identifiers":["UMLS:C2676724","MEDGEN:394109","MESH:C567344","OMIM:612345","DOID:0060416"],"synonyms":[{"name":"chromosome 2q31.2 deletion syndrome","type":"exact"}],"termid":"MONDO:0012870","xrefs":{"Monarch":{"xref_id":"0012870"}}}


id: PBO:0069970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1265, pseudogene","termid":"PBO:0069970"}


id: MONDO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the endocervix. It is the most common type of endocervical adenocarcinoma. The neoplastic epithelium shows a pseudostratified architecture and the malignant cells have enlarged, elongated, and hyperchromatic nuclei.","definition_xrefs":["NCIT:C127907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocervical carcinoma","termid":"MONDO:0004259"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endocervical adenocarcinoma","secondary_identifiers":["MEDGEN:688039","DOID:0050940","UMLS:C1263762","ONCOTREE:ECAD","SCTID:123842006"],"synonyms":[{"name":"endocervical adenocarcinoma, usual type","type":"exact"},{"name":"endocervix adenocarcinoma","type":"exact"}],"termid":"MONDO:0000554","xrefs":{"Monarch":{"xref_id":"0000554"}}}


id: MONDO:0015421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orofaciodigital syndrome type 12 is a rare subtype of orofaciodigital syndrome, with sporadic occurrence, characterized by cardiac (septum hypertrophy) and central nervous system abnormalities (myelomeningocele, Sylvius aqueduct stenosis, corpus callosum agenesis, vermis hypoplasia), in addition to oral, facial and digital malformations (gingival frenulae, bifid tongue, supernumerary teeth, macrocephaly, hypertelorism, pre- and post-axial polydactyly in hands, preaxial polydactyly in feet and club feet). Skeletal anomalies, such as short tibiae and central, Y-shaped metacarpals, are also associated.","definition_xrefs":["Orphanet:141327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome type 12","secondary_identifiers":["MEDGEN:420948","UMLS:C2932679","GARD:10693","MESH:C548034","SCTID:763834000"],"synonyms":[{"name":"Moran-Barroso syndrome","type":"exact"},{"name":"OFD12","type":"exact"},{"name":"OFDS 12","type":"related"},{"name":"oral facial digital syndrome 12","type":"related"},{"name":"oral facial digital syndrome type 12","type":"related"},{"name":"oral-facial-digital syndrome 12","type":"related"},{"name":"oral-facial-digital syndrome type 12","type":"exact"},{"name":"orofaciodigital syndrome 12","type":"related"},{"name":"orofaciodigital syndrome XII","type":"related"}],"termid":"MONDO:0015421","xrefs":{"Monarch":{"xref_id":"0015421"}}}


id: MONDO:0015831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mullerian aplasia","termid":"MONDO:0019128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral aplasia of the mullerian ducts","secondary_identifiers":["Orphanet:180071","UMLS:C0266389","GARD:20173","MEDGEN:78600"],"synonyms":[{"name":"unicornuate uterus","type":"exact"},{"name":"unilateral aplasia of the Müllerian ducts","type":"related"}],"termid":"MONDO:0015831","xrefs":{"Monarch":{"xref_id":"0015831"}}}


id: FYPO:0003422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and tapered, i.e. tapers at one end to a diameter smaller than the other, contains more than one septum, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, septated cell with abnormal morphology","termid":"FYPO:0002450"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated tapered cell","termid":"FYPO:0002733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate tapered cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate bottle-shaped cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate bottle/skittle cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate skittle-shaped cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"}],"termid":"FYPO:0003422"}


id: GO:1905866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Atg1/ULK1 kinase complex assembly.","definition_xrefs":["GOC:mf","GOC:TermGenie","GO_REF:0000058","PMID:26567215","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of Atg1/ULK1 kinase complex assembly","termid":"GO:1905864"},{"relation_name":"positively_regulates","term_name":"Atg1/ULK1 kinase complex assembly","termid":"GO:1904745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"activation of ATG1 kinase complex assembly","type":"narrow"},{"name":"activation of ATG1 kinase complex formation","type":"narrow"},{"name":"activation of ATG1-ATG13 complex assembly","type":"narrow"},{"name":"activation of ATG1-ATG13 complex formation","type":"narrow"},{"name":"activation of ATG1/ULK1 kinase complex assembly","type":"narrow"},{"name":"activation of ATG1/ULK1 kinase complex formation","type":"narrow"},{"name":"activation of ATG1/ULK1 signaling complex assembly","type":"narrow"},{"name":"activation of ATG1/ULK1 signaling complex formation","type":"narrow"},{"name":"activation of Atg1p signalling complex assembly","type":"narrow"},{"name":"activation of Atg1p signalling complex formation","type":"narrow"},{"name":"activation of ULK1 signaling complex assembly","type":"narrow"},{"name":"activation of ULK1 signaling complex formation","type":"narrow"},{"name":"activation of ULK1-ATG13-FIP200 complex assembly","type":"narrow"},{"name":"activation of ULK1-ATG13-FIP200 complex formation","type":"narrow"},{"name":"activation of ULK1-ATG13-RB1CC1 complex assembly","type":"narrow"},{"name":"activation of ULK1-ATG13-RB1CC1 complex formation","type":"narrow"},{"name":"positive regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"positive regulation of ATG1 kinase complex formation","type":"exact"},{"name":"positive regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"positive regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"positive regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"positive regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"positive regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"positive regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"positive regulation of Atg1p signalling complex formation","type":"exact"},{"name":"positive regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"positive regulation of ULK1 signaling complex formation","type":"exact"},{"name":"positive regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"positive regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"positive regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"positive regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"up regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"up regulation of ATG1 kinase complex formation","type":"exact"},{"name":"up regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"up regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"up regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"up regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"up regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"up regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"up regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"up regulation of Atg1p signalling complex formation","type":"exact"},{"name":"up regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"up regulation of ULK1 signaling complex formation","type":"exact"},{"name":"up regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"up regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"up regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"up regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"up-regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"up-regulation of ATG1 kinase complex formation","type":"exact"},{"name":"up-regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"up-regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"up-regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"up-regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"up-regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"up-regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"up-regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"up-regulation of Atg1p signalling complex formation","type":"exact"},{"name":"up-regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"up-regulation of ULK1 signaling complex formation","type":"exact"},{"name":"up-regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"up-regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"up-regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"up-regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"upregulation of ATG1 kinase complex assembly","type":"exact"},{"name":"upregulation of ATG1 kinase complex formation","type":"exact"},{"name":"upregulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"upregulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"upregulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"upregulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"upregulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"upregulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"upregulation of Atg1p signalling complex assembly","type":"exact"},{"name":"upregulation of Atg1p signalling complex formation","type":"exact"},{"name":"upregulation of ULK1 signaling complex assembly","type":"exact"},{"name":"upregulation of ULK1 signaling complex formation","type":"exact"},{"name":"upregulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"upregulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"upregulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"upregulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1905866"}


id: PR:P36606
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sod2 gene.","definition_xrefs":["UniProtKB:P36606","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Na(+)/H(+) antiporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.10","synonyms":[{"name":"Spom972h-sod2","type":"exact"}],"termid":"PR:P36606"}


id: PBO:0078718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 3-1","termid":"PBO:0078718"}


id: MONDO:0958265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic scleritis","secondary_identifiers":["Orphanet:648675","MEDGEN:1853157","UMLS:C5816747"],"termid":"MONDO:0958265","xrefs":{"Monarch":{"xref_id":"0958265"}}}


id: PBO:0058034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4255","termid":"PBO:0058034"}


id: PBO:0046822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 1","termid":"PBO:0046822"}


id: GO:0018412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein by glucuronidation on an amino acid oxygen atom.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein O-glucuronidation (obsolete GO:0018412)","synonyms":[{"name":"protein amino acid O-glucuronidation","type":"exact"}],"termid":"GO:0018412"}


id: PBO:0060837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 pseudogene 1","termid":"PBO:0060837"}


id: PBO:0079444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 2","termid":"PBO:0079444"}


id: PBO:0059993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 13","termid":"PBO:0059993"}


id: GO:0019781
data:
  {"annotated_genes":["SJAG_03950","SJAG_00878"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73044,81379],"is_not":false,"summary":null,"term":"GO:0019781"}]},"cv_name":"molecular_function","definition":"Catalysis of the initiation of the NEDD8 (RUB1) conjugation cascade.","definition_xrefs":["PMID:12646924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00878":null,"SJAG_03950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"NEDD8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0019944","EC:6.2.1.64"],"synonyms":[{"name":"RUB1 activating enzyme activity","type":"exact"}],"termid":"GO:0019781","terms_by_termid":{"GO:0019781":null}}


id: MONDO:1011079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in domestic ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, domestic ferret","secondary_identifiers":["OMIA:001033-9669"],"termid":"MONDO:1011079","xrefs":{"Monarch":{"xref_id":"1011079"}}}


id: PBO:0077744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript overexpressed in dedifferentiated liposarcoma","termid":"PBO:0077744"}


id: PBO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase (predicted)","termid":"PBO:0000751"}


id: PBO:0005076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Pex1 (predicted)","termid":"PBO:0005076"}


id: PBO:0064723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 59","termid":"PBO:0064723"}


id: GO:0140164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Golgi transport complex, a multisubunit tethering complex of the CATCHR family.","definition_xrefs":["GOC:ha","PMID:28100664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Golgi transport complex binding","synonyms":[{"name":"COG complex binding","type":"exact"}],"termid":"GO:0140164"}


id: MONDO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign neoplasm that arises from the prostate gland and is characterized by the presence of hyperplastic glands and stroma that contains spindle-shaped cells.","definition_xrefs":["NCIT:C5532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"prostate phyllodes tumor","termid":"MONDO:0021102"},{"relation_name":"is_a","term_name":"benign neoplasm of prostate","termid":"MONDO:0021510"},{"relation_name":"is_a","term_name":"benign phyllodes tumor","termid":"MONDO:0037002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostate phyllodes tumor","secondary_identifiers":["UMLS:C1332535","DOID:2885","MEDGEN:272364"],"synonyms":[{"name":"benign phyllodes neoplasm of prostate","type":"exact"},{"name":"benign phyllodes neoplasm of the prostate","type":"exact"},{"name":"benign phyllodes tumor of prostate","type":"exact"},{"name":"benign phyllodes tumor of the prostate","type":"exact"},{"name":"benign phyllodes tumour of prostate","type":"exact"},{"name":"benign phyllodes tumour of the prostate","type":"exact"},{"name":"benign prostate phyllodes neoplasm","type":"exact"},{"name":"benign prostate phyllodes tumor","type":"exact"},{"name":"phyllodes neoplasm of the prostate","type":"broad"},{"name":"prostate phyllodes tumor","type":"broad"},{"name":"prostate phyllodes tumor, benign","type":"exact"},{"name":"prostate phyllodes tumour","type":"broad"}],"termid":"MONDO:0002451","xrefs":{"Monarch":{"xref_id":"0002451"}}}


id: GO:0022856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sorbitol(out) = protein histidine + sorbitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"sorbitol transmembrane transporter activity","termid":"GO:0015576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sorbitol phosphotransferase system transporter activity","synonyms":[{"name":"sorbitol PTS transporter activity","type":"exact"}],"termid":"GO:0022856"}


id: MOD:01727
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"derives_from","term_name":"cysTMT6plex-zero reporter+balance reagent cysteine disulfide","termid":"MOD:01822"},{"relation_name":"derives_from","term_name":"cysTMT6plex-126 reporter+balance reagent cysteine disulfide","termid":"MOD:01823"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-126 reporter fragment","type":"exact"}],"termid":"MOD:01727"}


id: PBO:0066474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 1","termid":"PBO:0066474"}


id: PBO:0061480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 1","termid":"PBO:0061480"}


id: PBO:0069066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 313, pseudogene","termid":"PBO:0069066"}


id: GO:0048382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesendoderm over time, from its formation to the mature structure. In animal embryos, mesendoderm development gives rise to both mesoderm and endoderm tissues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"endoderm development","termid":"GO:0007492"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesendoderm development","termid":"GO:0048382"}


id: FYPO:0006289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phytoceramide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular ceramide level","termid":"FYPO:0008288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phytoceramide level","synonyms":[{"name":"increased cellular phytoceramide level during mitotic cell cycle","type":"related"},{"name":"increased cellular phytoceramide level during vegetative growth","type":"exact"},{"name":"increased phytoceramide accumulation","type":"related"}],"termid":"FYPO:0006289"}


id: MOD:01147
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Hex)3-HexNAc-(dHex)HexNAc","termid":"MOD:01147"}


id: PBO:0002730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx1","termid":"PBO:0002730"}


id: PBO:0087364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific exo-1,3-beta-glucanase; contributes to ascospore thermoresistance; SPR1 has a paralog, EXG1, that arose from the whole genome duplication","termid":"PBO:0087364"}


id: PBO:0066605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T2","termid":"PBO:0066605"}


id: PBO:0077260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10","termid":"PBO:0077260"}


id: MONDO:0023692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A maple syrup urine disease caused by mutations in BCKDHB.","direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"maple syrup urine disease type 1B","secondary_identifiers":["OMIM:620698","MEDGEN:443951","GARD:8597","UMLS:C2930990"],"synonyms":[{"name":"MSUD due to deficiency of E1-beta subunit of branched-chain alpha-keto acid dehydrogenase complex","type":"related"},{"name":"MSUD type 3 (formerly)","type":"related"},{"name":"MSUD type IB","type":"related"},{"name":"maple syrup urine disease type 1B","type":"exact"}],"termid":"MONDO:0023692","xrefs":{"Monarch":{"xref_id":"0023692"}}}


id: PBO:0113208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial HMG-box protein; limits the copy number of mitochondrial DNA (mtDNA), antagonizing HMG-box containing protein Abf2p, a mtDNA packaging factor; localizes to the mitochondrial matrix; contains two HMG-boxes similar to Abf2p; null mutant is viable","termid":"PBO:0113208"}


id: PBO:0069452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 717, pseudogene","termid":"PBO:0069452"}


id: PR:000044505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein ypt5 (Schizosaccharomyces pombe) that is prenylated with Geranylgeranyl moieties on the Cys residues within the CxC motif. In addition, the C-terminal Cys is further methylated. Example: UniProtKB:P36586-1, Cys-209/Cys-211, MOD:00113|Cys-211, MOD:00114.","definition_xrefs":["PMID:1597466","PomBase:MAH","PMID:8226998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","termid":"PR:000030005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt5 methylated and prenylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"SpYPT5p prenylated","type":"related"}],"termid":"PR:000044505"}


id: PBO:0044729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 12B, pseudogene","termid":"PBO:0044729"}


id: PBO:0108539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 202","termid":"PBO:0108539"}


id: FYECO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which diethyl maleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ diethyl maleate","synonyms":[{"name":"diethyl maleate added","type":"exact"}],"termid":"FYECO:0000153"}


id: PBO:0029032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_telomere","termid":"PBO:0029032"}


id: PBO:0081807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736","termid":"PBO:0081807"}


id: GO:0046523
data:
  {"annotated_genes":["SJAG_03614"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78571],"is_not":false,"summary":null,"term":"GO:0046523"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-5-thio-alpha-D-ribose 1-phosphate = S-methyl-5-thio-D-ribulose 1-phosphate.","definition_xrefs":["RHEA:19989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-methyl-5-thioribose-1-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:5.3.1.23","MetaCyc:5.3.1.23-RXN","Reactome:R-HSA-1237096","Reactome:R-HSA-1299507","KEGG_REACTION:R04420"],"synonyms":[{"name":"1-PMTR isomerase activity","type":"related"},{"name":"1-phospho-5'-S-methylthioribose isomerase activity","type":"related"},{"name":"5-methylthio-5-deoxy-D-ribose-1-phosphate ketol-isomerase activity","type":"related"},{"name":"5-methylthioribose-1-phosphate isomerase activity","type":"exact"},{"name":"MTR-1-P isomerase activity","type":"related"},{"name":"S-methyl-5-thio-5-deoxy-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-5-deoxy-D-ribose-1-phosphate ketol-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-alpha-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"methylthioribose 1-phosphate isomerase activity","type":"related"}],"termid":"GO:0046523","terms_by_termid":{"GO:0046523":null}}


id: MONDO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic neuropathy","termid":"MONDO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"diabetic polyneuropathy","secondary_identifiers":["icd11.foundation:1837670870","UMLS:C0271680","SCTID:49455004","MEDGEN:75763","DOID:12785","ICD9:357.2"],"synonyms":[{"name":"diabetes mellitus with polyneuropathy","type":"exact"},{"name":"polyneuropathy in diabetes","type":"exact"}],"termid":"MONDO:0001583","xrefs":{"Monarch":{"xref_id":"0001583"}}}


id: MONDO:0021913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aquagenic pruritus is a conditionin which contact with water of any temperature causes intense itching, without any visible skin changes. The symptoms may begin immediately after contact and can last for an hour or more. The cause of aquagenic pruritus is unknown; however, familial cases have been described. It may be a symptom of polycythemia vera or another underlying condition. Overall, treatment is a challenge. Antihistamines, UVB phototherapy, PUVA therapy and various medications have been tried with varying degrees of success.","definition_xrefs":["GARD:0010278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aquagenic pruritus","secondary_identifiers":["MEDGEN:98026","UMLS:C0406409","icd11.foundation:1090223712","ICD9:698.8","SCTID:238695001"],"synonyms":[{"name":"aquagenic pruritus","type":"exact"},{"name":"water-induced itching","type":"related"}],"termid":"MONDO:0021913","xrefs":{"Monarch":{"xref_id":"0021913"}}}


id: MONDO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary epidermolysis bullosa associated with ocular features (obsolete MONDO:0016997)","secondary_identifiers":["Orphanet:263676"],"termid":"MONDO:0016997","xrefs":{"Monarch":{"xref_id":"0016997"}}}


id: PBO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 2","termid":"PBO:0075329"}


id: SO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ISRE is a transcriptional cis regulatory region, containing the consensus region: YAGTTTC(A/T)YTTTYCC, responsible for increased transcription via interferon binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISRE","synonyms":[{"name":"interferon stimulated response element","type":"exact"}],"termid":"SO:0001715"}


id: FYPO:0001153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular methylamine level","synonyms":[{"name":"normal cellular methylamine accumulation","type":"related"},{"name":"normal cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular methylamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001153"}


id: PBO:0082824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved oxidoreductase involved in lipid droplet morphology; mutant shows defects in CPY processing and vacuolar morphology; required for replication of Brome mosaic virus in S. cerevisiae, a model system for studying replication of positive-strand RNA viruses in their natural hosts; homologus to human RDH12 linked to Leber Congenital Amaurosis","termid":"PBO:0082824"}


id: GO:0061171
data:
  {"annotated_genes":["SJAG_04322","SJAG_03596","SJAG_02838","SJAG_03705","SJAG_01456","SJAG_04522","SJAG_01373","SJAG_00216","SJAG_04724","SJAG_00845","SJAG_00317","SJAG_00030","SJAG_00514","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94362,106451,121198],"is_not":false,"summary":null,"term":"GO:0061171"},{"annotations":[118323,119752,89821,112588,101526,105283,108665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[92731],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[105494,109424,114309],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"The specification and formation of bipolar intracellular organization or cell growth patterns. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00216":null,"SJAG_00317":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03596":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04522":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"termid":"GO:0061171","terms_by_termid":{"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:1904846":null}}


id: MONDO:0035408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"furuncular myiasis","termid":"MONDO:0018941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"furuncular myiasis due to Cordylobia rodhaini","secondary_identifiers":["ICD10CM:B87.0","MEDGEN:1685143","Orphanet:563690","UMLS:C5231033","GARD:22261"],"synonyms":[{"name":"furunculoid myiasis due to Cordylobia rodhaini","type":"exact"},{"name":"furunculous myiasis due to Cordylobia rodhaini","type":"exact"}],"termid":"MONDO:0035408","xrefs":{"Monarch":{"xref_id":"0035408"}}}


id: PBO:0058634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6766","termid":"PBO:0058634"}


id: PBO:0056797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofusin 1","termid":"PBO:0056797"}


id: PBO:0056322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K5 antisense RNA 2","termid":"PBO:0056322"}


id: PBO:0041234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 68","termid":"PBO:0041234"}


id: RO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part_that_occurs_in","termid":"RO:0002479"}


id: PBO:0046400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPB41L4A divergent transcript","termid":"PBO:0046400"}


id: GO:0019727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NAD+ = H+ + mevaldate + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADH) activity (obsolete GO:0019727)","termid":"GO:0019727"}


id: PBO:0050270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 48","termid":"PBO:0050270"}


id: MONDO:0008391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Robinow-Sorauf syndrome","secondary_identifiers":["icd11.foundation:1272297510","MESH:C537183","OMIM:180750","Orphanet:3106","UMLS:C1867146","GARD:4730","MEDGEN:356703"],"synonyms":[{"name":"Robinow-Sorauf syndrome","type":"exact"},{"name":"acrocephalosyndactyly, Robinow-Sorauf type","type":"related"},{"name":"craniosynostosis-bifid hallux syndrome","type":"related"}],"termid":"MONDO:0008391","xrefs":{"Monarch":{"xref_id":"0008391"}}}


id: FYPO:0003618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing aculeacin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on aculeacin A","synonyms":[{"name":"normal cell population growth in presence of aculeacin A","type":"exact"},{"name":"normal cell population growth on aculeacin A","type":"exact"},{"name":"normal cellular response to aculeacin A","type":"related"},{"name":"normal vegetative cell population growth on aculeacin A","type":"exact"}],"termid":"FYPO:0003618"}


id: GO:0043590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a bacterial cell to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial nucleoid","termid":"GO:0043590"}


