# terms

id: MONDO:0035314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare congenital tricuspid malformation characterized by irregular thickening of the leaflet tissue by myxoid connective tissue in a normally delaminated tricuspid valve, without septal leaflet displacement, and without an atrialized right ventricle. The chordae tendineae may be short or absent. The affected valve is stenotic and/or incompetent. Clinically, most patients are asymptomatic and are diagnosed in the context of the evaluation of a murmur. [Orphanet:555874]","definition_xrefs":["Orphanet:555874"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital tricuspid valve dysplasia (obsolete MONDO:0035314)","secondary_identifiers":["ICD10CM:Q22.8"],"termid":"MONDO:0035314","xrefs":{"Monarch":{"xref_id":"0035314"}}}


id: PBO:0042087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 154","termid":"PBO:0042087"}


id: PBO:0073383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SETBP1 divergent transcript","termid":"PBO:0073383"}


id: PBO:0049720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 5","termid":"PBO:0049720"}


id: MOD:00004
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Artifact entry from Unimod - OBSOLETE because organizational use is no longer required.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00004 artifact (obsolete MOD:00004)","termid":"MOD:00004"}


id: GO:0036043
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A dynamic, actin-rich projection extending from the surface of a migrating animal cell.","definition_xrefs":["PMID:12153987","PMID:11429692","PMID:19095735"],"gene_count":0,"genotype_count":0,"name":"obsolete microspike (obsolete GO:0036043)","synonyms":[{"name":"microspike","type":"exact"}],"termid":"GO:0036043"}


id: GO:1900107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nodal signaling pathway.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin receptor signaling pathway","termid":"GO:0032925"},{"relation_name":"regulates","term_name":"nodal signaling pathway","termid":"GO:0038092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nodal signaling pathway","synonyms":[{"name":"regulation of nodal signaling","type":"exact"},{"name":"regulation of nodal signalling pathway","type":"exact"}],"termid":"GO:1900107"}


id: FYPO:0002587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any mitochondrially-encoded polycistronic RNA precursors measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of mitochondrial polycistronic RNA precursors","synonyms":[{"name":"increased accumulation of mitochondrial polycistronic RNA precursors","type":"related"},{"name":"increased level of mitochondrial polycistronic RNA precursors during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial polycistronic RNA precursors during vegetative growth","type":"exact"}],"termid":"FYPO:0002587"}


id: CHEBI:46245
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10","termid":"CHEBI:46245"}


id: PBO:0026876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiotic_DNA_double-strand_break_clipping","termid":"PBO:0026876"}


id: MONDO:0012896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 10, susceptibility to","secondary_identifiers":["MEDGEN:854730","UMLS:C3888028","DOID:0111289","OMIM:612410"],"synonyms":[{"name":"PSORS10","type":"exact"},{"name":"psoriasis 10, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 10","type":"exact"}],"termid":"MONDO:0012896","xrefs":{"Monarch":{"xref_id":"0012896"}}}


id: MONDO:0014903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any benign familial infantile epilepsy in which the cause of the disease is a mutation in the SCN8A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 5","secondary_identifiers":["OMIM:617080","UMLS:C4310728","DOID:0081118","MEDGEN:934695","GARD:16506"],"synonyms":[{"name":"BFIS5","type":"exact"},{"name":"SCN8A benign familial infantile epilepsy","type":"exact"},{"name":"benign familial infantile epilepsy caused by mutation in SCN8A","type":"exact"},{"name":"convulsions, benign familial infantile, 5","type":"related"},{"name":"seizures, benign familial infantile, 5","type":"exact"},{"name":"seizures, benign familial infantile, 5; BFIS5","type":"exact"},{"name":"seizures, benign familial infantile, type 5","type":"exact"}],"termid":"MONDO:0014903","xrefs":{"Monarch":{"xref_id":"0014903"}}}


id: PR:Q9UST2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protease subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03408","PANTHER:PTHR12383:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protease subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.13c","secondary_identifiers":["UniProtKB:Q9UST2"],"synonyms":[{"name":"Spom972h-IMMP2L","type":"exact"}],"termid":"PR:Q9UST2"}


id: MONDO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival fibromatosis - hypertrichosis syndrome is a rare autosomal dominant disorder characterized by a generalized enlargement of the gingiva occurring at birth or during childhood that is associated with generalized hypertrichosis developing at birth, during the first years of life, or at puberty and predominantly affecting the face, upper limbs, and midback.","definition_xrefs":["Orphanet:2026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"gingival fibromatosis-hypertrichosis syndrome","secondary_identifiers":["MESH:C565016","GARD:2324","OMIM:135400","SCTID:716008002","MEDGEN:342675","UMLS:C1851120"],"synonyms":[{"name":"CGHT","type":"exact"},{"name":"HTC3","type":"related"},{"name":"chromosome 17Q24.2-q24.3 Duplication syndrome","type":"related"},{"name":"chromosome 17Q24.2-q24.3 deletion syndrome","type":"related"},{"name":"congenital generalised hypertrichosis terminalis","type":"exact"},{"name":"congenital generalized hypertrichosis terminalis","type":"exact"},{"name":"extreme hirsutism with gingival fibromatosis","type":"related"},{"name":"fibromatosis, gingival, with hypertrichosis","type":"related"},{"name":"gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hereditary gingival fibromatosis with hypertrichosis","type":"related"},{"name":"hirsutism-congenital gingival hyperplasia syndrome","type":"exact"},{"name":"hypertrichosis terminalis, generalized, with gingival hyperplasia","type":"related"},{"name":"hypertrichosis terminalis, generalized, with or without gingival hyperplasia","type":"related"},{"name":"hypertrichosis with or without gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with gingival hyperplasia","type":"exact"},{"name":"hypertrichosis, congenital generalized, with or without gingival hyperplasia","type":"related"},{"name":"microdeletion 17Q24.2-q24.3 syndrome","type":"related"},{"name":"microduplication 17Q24.2-q24.3 syndrome","type":"related"}],"termid":"MONDO:0007610","xrefs":{"Monarch":{"xref_id":"0007610"}}}


id: PBO:0058306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4679-2","termid":"PBO:0058306"}


id: GO:0120542
data:
  {"annotated_genes":["SJAG_03370","SJAG_03822","SJAG_01414","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100515,100516,116455,116456],"is_not":false,"summary":null,"term":"GO:0120542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanol + NAD+ = acetaldehyde + NADH + H+.","definition_xrefs":["RHEA:25290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ethanol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120542","terms_by_termid":{"GO:0120542":null}}


id: FYPO:0001255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to the level of oxygen is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during cellular response to oxygen","synonyms":[{"name":"increased protein accumulation during cellular response to oxygen","type":"related"},{"name":"increased protein level during cellular response to oxygen during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to oxygen during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to oxygen levels","type":"exact"}],"termid":"FYPO:0001255"}


id: MONDO:0017794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xq12-q13.3 duplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome X, characterized by global developmental delay, autistic behavior, microcephaly and facial dysmorphism (including down-slanting palpebral fissures, depressed nasal bridge, anteverted nares, long philtrum, down-slanting corners of the mouth). Seizures have also been reported in some patients.","definition_xrefs":["Orphanet:314389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xq12-q13.3 duplication syndrome","secondary_identifiers":["GARD:21369","MEDGEN:1648034","SCTID:764711007","UMLS:C4707094"],"synonyms":[{"name":"dup(X)(q12-q13.3)","type":"exact"}],"termid":"MONDO:0017794","xrefs":{"Monarch":{"xref_id":"0017794"}}}


id: GO:0090386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagosome maturation","termid":"GO:0090382"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"phagosome maturation involved in apoptotic cell clearance","termid":"GO:0090386"}


id: PR:O13658
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C27B12.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.11c","synonyms":[{"name":"Spom972h-pho7","type":"exact"}],"termid":"PR:O13658"}


id: GO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of ubiquitin groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deubiquitination (obsolete GO:0016578)","synonyms":[{"name":"histone deubiquitinylation","type":"exact"},{"name":"histone deubiquitylation","type":"exact"}],"termid":"GO:0016578"}


id: MONDO:0005830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poxvirus infection of cattle characterized by the appearance of nodules on all parts of the skin.","definition_xrefs":["MESH:D008166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumpy skin disease","secondary_identifiers":["EFO:0007349","UMLS:C0024106","MEDGEN:9815"],"termid":"MONDO:0005830","xrefs":{"Monarch":{"xref_id":"0005830"}}}


id: GO:0030850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.","definition_xrefs":["PMID:11839751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"urogenital system development","termid":"GO:0001655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland development","synonyms":[{"name":"prostate development","type":"exact"}],"termid":"GO:0030850"}


id: MONDO:0008928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-ataxia-deafness syndrome is characterized by mild intellectual deficit, congenital cataract, progressive sensorineural deafness and ataxia. It has been described in two sisters. The inheritance is likely to be autosomal recessive.","definition_xrefs":["Orphanet:1368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract-ataxia-deafness syndrome","secondary_identifiers":["GARD:1141","UMLS:C0796123","MESH:C538283","OMIM:212710","MEDGEN:163216"],"synonyms":[{"name":"Begeer syndrome","type":"related"},{"name":"cataract ataxia deafness","type":"related"},{"name":"cataract ataxia deafness syndrome","type":"related"},{"name":"cataract-ataxia-deafness-retardation syndrome","type":"related"},{"name":"polyneuropathy, cataract, deafness syndrome","type":"related"},{"name":"polyneuropathy-cataract-deafness syndrome","type":"related"}],"termid":"MONDO:0008928","xrefs":{"Monarch":{"xref_id":"0008928"}}}


id: GO:0046646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell proliferation","synonyms":[{"name":"regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"regulation of gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046646"}


id: PBO:0081769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 701","termid":"PBO:0081769"}


id: PBO:0005402
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.37","termid":"PBO:0005402"}


id: PR:O74890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11766:SF0","OMA:SCHPO04935","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.06c","secondary_identifiers":["UniProtKB:O74890"],"synonyms":[{"name":"Spom972h-YARS2","type":"exact"},{"name":"TyrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tyrosyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74890"}


id: PBO:0067725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 23","termid":"PBO:0067725"}


id: PBO:0055191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2615","termid":"PBO:0055191"}


id: GO:0060612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adipose tissue development","synonyms":[{"name":"adipogenesis","type":"related"}],"termid":"GO:0060612"}


id: PBO:0054991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2405","termid":"PBO:0054991"}


id: PBO:0027355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyruvate_decarboxylase_activity","termid":"PBO:0027355"}


id: FYPO:0000189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mRNA splicing via the spliceosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing, via spliceosome","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal mRNA splicing, via spliceosome","synonyms":[{"name":"abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abnormal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0000189"}


id: PBO:0081464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 334","termid":"PBO:0081464"}


id: FYPO:0003711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain any detectable Skb1-containing lateral cortical nodes.","definition_xrefs":["PMID:25009287","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"lateral cortical nodes absent from cell","synonyms":[{"name":"Skb1-containing cortical nodes absent from cell","type":"exact"},{"name":"absent lateral cortical nodes","type":"exact"},{"name":"lateral cortical nodes absent from cell during mitotic cell cycle","type":"related"},{"name":"lateral cortical nodes absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003711"}


id: PBO:0066840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 140","termid":"PBO:0066840"}


id: GO:0009298
data:
  {"annotated_genes":["SJAG_03188","SJAG_00890","SJAG_02648","SJAG_02783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69789,77110,79682,104886],"is_not":false,"summary":null,"term":"GO:0009298"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-mannose metabolic process","termid":"GO:0019673"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP-mannose biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446205"],"synonyms":[{"name":"GDP-mannose anabolism","type":"exact"},{"name":"GDP-mannose biosynthesis","type":"exact"},{"name":"GDP-mannose formation","type":"exact"},{"name":"GDP-mannose synthesis","type":"exact"}],"termid":"GO:0009298","terms_by_termid":{"GO:0009298":null}}


id: GO:0035143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the caudal fin are generated and organized. A caudal fin is an unpaired medial fin mounted at the caudal end of the fish, and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"caudal fin development","termid":"GO:0033336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin morphogenesis","termid":"GO:0035143"}


id: GO:0031020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An mRNA editing complex found in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA editing complex","termid":"GO:0045293"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"plastid mRNA editing complex","synonyms":[{"name":"plastid editosome","type":"exact"}],"termid":"GO:0031020"}


id: GO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine metabolic process","synonyms":[{"name":"dopamine metabolism","type":"exact"}],"termid":"GO:0042417"}


id: MONDO:0019897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 12","termid":"MONDO:0016877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 12q","secondary_identifiers":["GARD:19328","Orphanet:96149","UMLS:C5438460","MEDGEN:1761314"],"synonyms":[{"name":"distal deletion 12q","type":"exact"},{"name":"distal monosomy type 12q","type":"exact"},{"name":"monosomy 12qter","type":"exact"},{"name":"telomeric deletion 12q","type":"exact"}],"termid":"MONDO:0019897","xrefs":{"Monarch":{"xref_id":"0019897"}}}


id: MONDO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal ectasia","secondary_identifiers":["UMLS:C0155135","ICD9:371.71","SCTID:14748007","ICD10CM:H18.71","MEDGEN:509803","DOID:1436","icd11.foundation:1703179358"],"termid":"MONDO:0001950","xrefs":{"Monarch":{"xref_id":"0001950"}}}


id: GO:1905664
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115199,92988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[103939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bhm","PMID:17640527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion import","termid":"GO:0090279"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion import across plasma membrane","termid":"GO:0098703"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905664","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PBO:0030980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_inner_repeat","termid":"PBO:0030980"}


id: PBO:0052051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 1 like","termid":"PBO:0052051"}


id: GO:0034405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fluid shear stress","termid":"GO:0034405"}


id: PR:Q8WZK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI ethanolamine phosphate transferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02524","PANTHER:PTHR12250:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI ethanolamine phosphate transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.08c","secondary_identifiers":["UniProtKB:Q8WZK2"],"synonyms":[{"name":"Spom972h-PIGN","type":"exact"},{"name":"immunosuppresant and temperature-sensitive protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8WZK2"}


id: GO:1900656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"negatively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of diorcinol biosynthetic process","synonyms":[{"name":"down regulation of diorcinol anabolism","type":"exact"},{"name":"down regulation of diorcinol biosynthesis","type":"exact"},{"name":"down regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down regulation of diorcinol formation","type":"exact"},{"name":"down regulation of diorcinol synthesis","type":"exact"},{"name":"down-regulation of diorcinol anabolism","type":"exact"},{"name":"down-regulation of diorcinol biosynthesis","type":"exact"},{"name":"down-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down-regulation of diorcinol formation","type":"exact"},{"name":"down-regulation of diorcinol synthesis","type":"exact"},{"name":"downregulation of diorcinol anabolism","type":"exact"},{"name":"downregulation of diorcinol biosynthesis","type":"exact"},{"name":"downregulation of diorcinol biosynthetic process","type":"exact"},{"name":"downregulation of diorcinol formation","type":"exact"},{"name":"downregulation of diorcinol synthesis","type":"exact"},{"name":"inhibition of diorcinol anabolism","type":"exact"},{"name":"inhibition of diorcinol biosynthesis","type":"exact"},{"name":"inhibition of diorcinol biosynthetic process","type":"narrow"},{"name":"inhibition of diorcinol formation","type":"exact"},{"name":"inhibition of diorcinol synthesis","type":"exact"},{"name":"negative regulation of diorcinol anabolism","type":"exact"},{"name":"negative regulation of diorcinol biosynthesis","type":"exact"},{"name":"negative regulation of diorcinol formation","type":"exact"},{"name":"negative regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900656"}


id: PBO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 4","termid":"PBO:0048612"}


id: PBO:0069415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 677, pseudogene","termid":"PBO:0069415"}


id: PBO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Ste11","termid":"PBO:0002559"}


id: SO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base in the start codon is changed, but the start remains.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiator_codon_variant","termid":"SO:0001582"},{"relation_name":"is_a","term_name":"synonymous_variant","termid":"SO:0001819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_retained_variant","synonyms":[{"name":"snpEff:SYNONYMOUS_START","type":"exact"}],"termid":"SO:0002019"}


id: GO:0019207
data:
  {"annotated_genes":["SJAG_01020","SJAG_03802","SJAG_02699","SJAG_04614","SJAG_02026","SJAG_02332","SJAG_01821","SJAG_04666","SJAG_00236","SJAG_00439","SJAG_03695","SJAG_00142","SJAG_03699","SJAG_00100","SJAG_02232","SJAG_00333","SJAG_03090","SJAG_00318","SJAG_03618","SJAG_04020","SJAG_04140","SJAG_03591","SJAG_02404","SJAG_05017","SJAG_01605","SJAG_03525","SJAG_01274","SJAG_00424","SJAG_03340","SJAG_00296","SJAG_03371","SJAG_04509","SJAG_01401","SJAG_03974","SJAG_01210","SJAG_03931","SJAG_01118","SJAG_01213","SJAG_03936","SJAG_00973","SJAG_02057","SJAG_04200","SJAG_02785","SJAG_04502","SJAG_00457","SJAG_03453","SJAG_01245","SJAG_00613","SJAG_01411","SJAG_05030","SJAG_02605","SJAG_01716","SJAG_05978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098744"},{"annotations":[72656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[103421,81515,114805,113036,118923,67295,71944,75755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[110716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[72225,80815,71868,75558,108071,110180,62873,73187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016538"},{"annotations":[96406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035014"},{"annotations":[108956,118162,90992,93081,114319,113269,71832,74602,80132,72140,73961,100976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[77599,108826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[74251,120250,117984,99534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019887"},{"annotations":[92627,92960,112374,70493,91215,77140,91007,94204,106931,77145,120236,111094,89673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[119895,110226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00296":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01020":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_01716":null,"SJAG_01821":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02404":null,"SJAG_02605":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_03974":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null,"SJAG_05030":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"kinase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019207","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0016538":null,"GO:0019887":null,"GO:0030291":null,"GO:0030295":null,"GO:0035014":null,"GO:0043539":null,"GO:0061575":null,"GO:0098744":null}}


id: MONDO:1011863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute necrotising encephalopathy of Leigh, non-human animal","secondary_identifiers":["OMIA:001097"],"termid":"MONDO:1011863","xrefs":{"Monarch":{"xref_id":"1011863"}}}


id: MONDO:0005341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most frequently seen skin cancer. It arises from basal cells of the epidermis and pilosebaceous units. Clinically it is divided into the following types: nodular, ulcerative, superficial, multicentric, erythematous, and sclerosing or morphea-like. More than 95% of these carcinomas occur in patients over 40. They develop on hair-bearing skin, most commonly on sun-exposed areas. Approximately 85% are found on the head and neck and the remaining 15% on the trunk and extremities. Basal cell carcinoma usually grows in a slow and indolent fashion. However, if untreated, the tumor may invade the subcutaneous fat, skeletal muscle and bone. Distant metastases are rare. Excision, curettage and irradiation cure most basal cell carcinomas.","definition_xrefs":["NCIT:C2921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"basal cell carcinoma","termid":"MONDO:0020804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin basal cell carcinoma","secondary_identifiers":["CSP:2000-2719","DOID:2513","HP:0002671","MEDGEN:1648304","ONCOTREE:BCC","SCTID:254701007","ICDO:8090/3","UMLS:C4721806"],"synonyms":[{"name":"BCC","type":"broad"},{"name":"basal cell cancer","type":"broad"},{"name":"basal cell carcinoma","type":"broad"},{"name":"basal cell carcinoma of skin","type":"exact"},{"name":"basal cell carcinoma of the skin","type":"exact"},{"name":"basal cell epithelioma","type":"exact"},{"name":"basal cell skin carcinoma","type":"exact"},{"name":"basal cell tumor","type":"broad"},{"name":"basal cell tumour","type":"broad"},{"name":"basal cell tumour (morphologic abnormality)","type":"broad"},{"name":"epithelioma basal cell","type":"related"},{"name":"malignant basal cell tumour","type":"broad"},{"name":"malignant basal cell tumour (morphologic abnormality)","type":"broad"},{"name":"skin basal cell cancer","type":"exact"},{"name":"skin basal cell carcinoma","type":"exact"}],"termid":"MONDO:0005341","xrefs":{"Monarch":{"xref_id":"0005341"}}}


id: MONDO:0014664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the KIAA0586 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 23","secondary_identifiers":["MEDGEN:900119","OMIM:616490","DOID:0110992","UMLS:C4084822","GARD:16124"],"synonyms":[{"name":"JBTS23","type":"exact"},{"name":"Joubert syndrome 23","type":"exact"},{"name":"Joubert syndrome caused by mutation in KIAA0586","type":"exact"},{"name":"Joubert syndrome type 23","type":"exact"},{"name":"KIAA0586 Joubert syndrome","type":"exact"}],"termid":"MONDO:0014664","xrefs":{"Monarch":{"xref_id":"0014664"}}}


id: PBO:0039356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 2","termid":"PBO:0039356"}


id: FYPO:0005673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured the cell is lower than normal during a cellular response to methyl methanesulfonate. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during cellular response to methyl methanesulfonate","termid":"FYPO:0003143"},{"relation_name":"is_a","term_name":"decreased level of ubiquitinated protein in cell","termid":"FYPO:0005226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased accumulation of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to MMS","type":"exact"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased level of ubiquitylated protein in cell during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased ubiquitinated protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"reduced level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005673"}


id: GO:0072676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah","CL:0000542","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration","termid":"GO:0072676"}


id: PBO:0041515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 40","termid":"PBO:0041515"}


id: MONDO:0019871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 2p is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 2, with a highly variable phenotype principally characterized by pre- and post-natal growth failure, global developmental delay, facial dysmorphism (incl. high forehead/frontal bossing, abnormal ear shape and/or position, hypertelorism/telecanthus, broad/depressed nasal bridge) and ocular anomalies (e.g. exophthalmos, retinal hypopigmentation, optic nerve and foveal hypoplasia). Other reported anomalies include generalized hypotonia, pectus excavatum, long fingers and toes, syndactyly, congenital heart (e.g. ventricular and atrial septal defects) and neural tube defects, seizures, pulmonary hypoplasia, diaphragmatic hernia and urogenital anomalies.","definition_xrefs":["Orphanet:96070"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 2","termid":"MONDO:0016939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 2p","secondary_identifiers":["SCTID:764518004","UMLS:C4706937","GARD:19304","MEDGEN:1646233"],"synonyms":[{"name":"distal duplication 2p","type":"exact"},{"name":"distal trisomy type 2p","type":"exact"},{"name":"telomeric duplication 2p","type":"exact"},{"name":"trisomy 2pter","type":"exact"}],"termid":"MONDO:0019871","xrefs":{"Monarch":{"xref_id":"0019871"}}}


id: GO:0035881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an amacrine cell, an interneuron generated in the inner nuclear layer (INL) of the vertebrate retina. Amacrine cells integrate, modulate, and interpose a temporal domain in the visual message presented to the retinal ganglion cells, with which they synapse in the inner plexiform layer. Amacrine cells lack large axons.","definition_xrefs":["CL:0000561","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amacrine cell differentiation","synonyms":[{"name":"amacrine neuron differentiation","type":"exact"}],"termid":"GO:0035881"}


id: GO:0034943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-2-methyl-5-isopropylhexa-2,5-dienoic acid + ATP + CoASH = trans-2-methyl-5-isopropylhexa-2,5-dienoyl-CoA + AMP + PPi.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-2-methyl-5-isopropylhexa-2,5-dienoate-CoA ligase activity (obsolete GO:0034943)","termid":"GO:0034943"}


id: PBO:0068371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 157","termid":"PBO:0068371"}


id: GO:0102696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cis-zeatin = H+ + 9-(alpha-D-glucosyl)-cis-zeatin + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-zeatin UDP glycosyltransferase activity (obsolete GO:0102696)","termid":"GO:0102696"}


id: PBO:0059291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 6","termid":"PBO:0059291"}


id: PBO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis","termid":"PBO:0031266"}


id: GO:0016635
data:
  {"annotated_genes":["SJAG_00197","SJAG_01671","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[77691,67697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a quinone or related compound.","definition_xrefs":["EC:1.3.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016635","terms_by_termid":{"GO:0008177":null,"GO:0106430":null}}


id: GO:0030830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cGMP catabolic process (obsolete GO:0030830)","synonyms":[{"name":"down regulation of cGMP catabolic process","type":"exact"},{"name":"down-regulation of cGMP catabolic process","type":"exact"},{"name":"downregulation of cGMP catabolic process","type":"exact"},{"name":"inhibition of cGMP catabolic process","type":"narrow"},{"name":"negative regulation of cGMP breakdown","type":"exact"},{"name":"negative regulation of cGMP catabolism","type":"exact"},{"name":"negative regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030830"}


id: MONDO:0002970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the ciliary body.","direct_ancestors":[{"relation_name":"is_a","term_name":"iris disorder","termid":"MONDO:0002289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ciliary body disorder","secondary_identifiers":["DOID:4353","UMLS:C0271100","NCIT:C35775","SCTID:68575007","MEDGEN:124384"],"synonyms":[{"name":"ciliary body disease","type":"exact"},{"name":"ciliary body disease or disorder","type":"exact"},{"name":"ciliary body disorder","type":"exact"},{"name":"disease of ciliary body","type":"exact"},{"name":"disease or disorder of ciliary body","type":"exact"},{"name":"disorder of ciliary body","type":"exact"}],"termid":"MONDO:0002970","xrefs":{"Monarch":{"xref_id":"0002970"}}}


id: PBO:0040138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 1","termid":"PBO:0040138"}


id: MONDO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the anal canal","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"anal canal cancer","secondary_identifiers":["ICD9:154.2","SCTID:363352004","DOID:0050688","ICD10CM:C21.1","UMLS:C0153445","MEDGEN:509296"],"synonyms":[{"name":"anal canal cancer","type":"exact"},{"name":"cancer of anal canal","type":"exact"},{"name":"malignant anal canal neoplasm","type":"exact"},{"name":"malignant neoplasm of anal canal","type":"exact"}],"termid":"MONDO:0000405","xrefs":{"Monarch":{"xref_id":"0000405"}}}


id: PBO:0052607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAS proto-oncogene, GTPase pseudogene 1","termid":"PBO:0052607"}


id: PBO:0059656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 22","termid":"PBO:0059656"}


id: MONDO:0020292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of the great arteries","secondary_identifiers":["MedDRA:10061080","Orphanet:98724","UMLS:C0948632","MEDGEN:798768","GARD:19556"],"synonyms":[{"name":"congenital aorta, aortic arch or pulmonary arteries anomaly","type":"exact"}],"termid":"MONDO:0020292","xrefs":{"Monarch":{"xref_id":"0020292"}}}


id: PBO:0082878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cu(+2)-transporting P-type ATPase; required for export of copper from the cytosol into an extracytosolic compartment; similar to human proteins involved in Menkes and Wilsons diseases; protein abundance increases in response to DNA replication stress; affects TBSV model (+)RNA virus replication by regulating copper metabolism; human homologs ATP7A and ATP7B both complement yeast null mutant","termid":"PBO:0082878"}


id: PBO:0005806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB complex subunit Bdp1 (predicted)","termid":"PBO:0005806"}


id: PBO:0087171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II second largest subunit B150; part of central core; similar to bacterial beta subunit","termid":"PBO:0087171"}


id: MONDO:0011635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multinodular goiter","termid":"MONDO:0000334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goiter, multinodular 3","secondary_identifiers":["OMIM:606082","MESH:C565260","MEDGEN:342940","UMLS:C1853686"],"synonyms":[{"name":"MNG3","type":"exact"},{"name":"goiter, multinodular 3","type":"exact"},{"name":"goiter, multinodular, 3","type":"exact"}],"termid":"MONDO:0011635","xrefs":{"Monarch":{"xref_id":"0011635"}}}


id: PR:P87153
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit eta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03631","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit eta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.12c","secondary_identifiers":["UniProtKB:P87153"],"synonyms":[{"name":"CCT-eta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT7","type":"exact"},{"name":"TCP-1-eta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87153"}


id: PBO:0044154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD phosphatase subunit 1","termid":"PBO:0044154"}


id: PBO:0030826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_lithium_ion","termid":"PBO:0030826"}


id: GO:2001113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"negatively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"negative regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001113"}


id: PBO:0074098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 1","termid":"PBO:0074098"}


id: PR:Q9USN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transducin beta-like protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04481","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.02","secondary_identifiers":["UniProtKB:Q9USN3"],"synonyms":[{"name":"Spom972h-TBL3","type":"exact"},{"name":"U3 snoRNA-associated protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN3"}


id: GO:1903743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GOC:TermGenie","PMID:25329901","GOC:kmv","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle transport along microtubule","termid":"GO:1901609"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle transport","termid":"GO:1902804"},{"relation_name":"is_a","term_name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"},{"relation_name":"negatively_regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterograde synaptic vesicle transport","synonyms":[{"name":"down regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"down-regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"downregulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"inhibition of anterograde synaptic vesicle transport","type":"narrow"}],"termid":"GO:1903743"}


id: FYPO:0001399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle is normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic spindle","synonyms":[{"name":"normal mitotic spindle during vegetative growth","type":"exact"},{"name":"normal spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001399"}


id: PBO:0063994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 28","termid":"PBO:0063994"}


id: GO:0036216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["PMID:18787413","PMID:7520444","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stem cell factor","termid":"GO:0036215"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to stem cell factor stimulus","synonyms":[{"name":"cellular response to KIT ligand","type":"exact"},{"name":"cellular response to KITLG","type":"exact"},{"name":"cellular response to SCF","type":"exact"},{"name":"cellular response to hematopoietic growth factor KL","type":"exact"}],"termid":"GO:0036216"}


id: PBO:0039631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyloxyacyl hydrolase","termid":"PBO:0039631"}


id: PBO:0065370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presenilin 1","termid":"PBO:0065370"}


id: GO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any molecular mediator of the immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"production of molecular mediator of immune response","synonyms":[{"name":"production of cellular mediator of immune response","type":"related"}],"termid":"GO:0002440"}


id: PBO:0068257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 4","termid":"PBO:0068257"}


id: PBO:0087083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L43A; null mutation confers a dominant lethal phenotype; homologous to mammalian ribosomal protein L37A, no bacterial homolog; RPL43A has a paralog, RPL43B, that arose from the whole genome duplication","termid":"PBO:0087083"}


id: FYPO:0004982
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121287,121289],"is_not":false,"summary":null,"term":"FYPO:0004982"}],"single_locus_phenotype":[{"annotations":[121275],"is_not":false,"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromeric region are present at greater levels than normal.","definition_xrefs":["PMID:26369364","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"increased centromeric transcript level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"increased accumulation of centromeric transcripts","type":"related"},{"name":"increased accumulation of centromeric transcripts during vegetative growth","type":"related"},{"name":"increased centromere transcript level","type":"exact"},{"name":"increased centromere-derived transcript level","type":"exact"},{"name":"increased centromeric transcript level during mitotic cell cycle","type":"related"},{"name":"increased centromeric transcript level during vegetative growth","type":"exact"},{"name":"increased level of centromeric transcripts","type":"exact"}],"termid":"FYPO:0004982","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004982":null}}


id: GO:0140417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion from intracellular stores by a channel that opens when a ATP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:22736763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"intracellularly ATP-gated calcium channel activity","synonyms":[{"name":"ATP-sensitive calcium-release channel activity","type":"related"}],"termid":"GO:0140417"}


id: MONDO:0859574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"annular epidermolytic ichthyosis","termid":"MONDO:0011870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"ichthyosis, annular epidermolytic, 2","secondary_identifiers":["OMIM:620148","MEDGEN:1824037","UMLS:C5774264"],"termid":"MONDO:0859574","xrefs":{"Monarch":{"xref_id":"0859574"}}}


id: GO:0070043
data:
  {"annotated_genes":["SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96683],"is_not":false,"summary":null,"term":"GO:0070043"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N7-methylguanine.","definition_xrefs":["GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02281":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0140098","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790982"],"termid":"GO:0070043","terms_by_termid":{"GO:0070043":null}}


id: PBO:0074153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E2A (pseudogene)","termid":"PBO:0074153"}


id: MONDO:0009914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudodiastrophic dysplasia is characterized by rhizomelic shortening of the limbs and severe clubfoot deformity, in association with elbow and proximal interphalangeal joint dislocations, platyspondyly, and scoliosis. It has been described in about 10 patients. An autosomal recessive inheritance has been suggested. Pseudodiastrophic dysplasia differs from diastrophic dysplasia on the basis of clinical, radiographic, and histopathologic findings. Clubfoot can be treated by surgical therapy, and neonatal contractures and scoliosis can be relieved by physical therapy. Several of the reported patients died in the neonatal period or during infancy.","definition_xrefs":["Orphanet:85174"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudodiastrophic dysplasia","secondary_identifiers":["OMIM:264180","ICD9:756.9","MEDGEN:140924","MESH:C535826","SCTID:254058002","UMLS:C0432206","GARD:9463","icd11.foundation:902021042"],"synonyms":[{"name":"Pseudodiastrophic dwarfism","type":"related"},{"name":"pseudodiastrophic dysplasia","type":"exact"}],"termid":"MONDO:0009914","xrefs":{"Monarch":{"xref_id":"0009914"}}}


id: GO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of the IgM isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgM receptor activity","termid":"GO:0001793"}


id: GO:0036457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic, non-membrane bound granule of, at least, keratinocyte. Associated to keratin intermediate filaments and partially crosslinked to the cell envelope.","definition_xrefs":["PMID:15854042","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"keratohyalin granule","termid":"GO:0036457"}


id: PBO:0068752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 7, pseudogene","termid":"PBO:0068752"}


id: GO:1900492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"negative regulation of iron-sulfur cluster assembly","termid":"GO:1903330"},{"relation_name":"negatively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"negatively_regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"down regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"down-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"downregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"inhibition of 4Fe-4S cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"negative regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"negative regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900492"}


id: PBO:0081781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 708","termid":"PBO:0081781"}


id: GO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which the change in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","termid":"GO:0001978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"}


id: MOD:00486
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:114#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxProBiotinRed","type":"related"},{"name":"Oxidized proline biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00486"}


id: PBO:0063687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progastricsin","termid":"PBO:0063687"}


id: MONDO:0012654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the TBX20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 4","secondary_identifiers":["OMIM:611363","UMLS:C1969657","MEDGEN:369556","DOID:0110109","MESH:C566963","GARD:15512"],"synonyms":[{"name":"ASD4","type":"exact"},{"name":"TBX20 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in TBX20","type":"exact"},{"name":"atrial heart septal defect type 4","type":"exact"},{"name":"atrial septal defect 4","type":"exact"},{"name":"atrial septal defect type 4","type":"exact"}],"termid":"MONDO:0012654","xrefs":{"Monarch":{"xref_id":"0012654"}}}


id: GO:0050837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a selenide-sulfide bond to form the cystine-like L-cysteinyl-L-selenocysteine, as in vertebrate selenopeptide P.","definition_xrefs":["RESID:AA0358"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteinyl-L-selenocysteine (obsolete GO:0050837)","termid":"GO:0050837"}


id: FYPO:0007651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abolished during mitosis.","definition_xrefs":["PomBase:mah","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during mitosis","synonyms":[{"name":"abolished protein localization to centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to nuclear centromeric heterochromatin during mitosis","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic M phase","type":"related"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007651"}


id: PBO:0016924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS protein complex associated ATPase Bud32 (predicted)","termid":"PBO:0016924"}


id: MONDO:1012713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy that occurs in dogs due to a mutation in the LGI2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign familial juvenile epilepsy, LGI2-related, dog","secondary_identifiers":["OMIA:001596-9615"],"synonyms":[{"name":"BFJE","type":"exact"},{"name":"epilepsy, benign familial juvenile, LGI2-related, dog","type":"exact"}],"termid":"MONDO:1012713","xrefs":{"Monarch":{"xref_id":"1012713"}}}


id: PBO:0080763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 2","termid":"PBO:0080763"}


id: PBO:0076985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 3","termid":"PBO:0076985"}


id: PBO:0056063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 4","termid":"PBO:0056063"}


id: PBO:0049752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 2","termid":"PBO:0049752"}


id: MONDO:0019035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pancreatoblastoma is a rare malignant epithelial pancreatic neoplasm, most often found in children, which usually presents with the non-specific symptoms of a palpable mass, vomiting abdominal pain, jaundice, and weight loss/failure to thrive, and is characterized histologically by multiple lines of differentiation (acinar, ductal, mesenchymal, neuroendocrine) and the presence of squamoid nests.","definition_xrefs":["Orphanet:677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant exocrine pancreas neoplasm","termid":"MONDO:0002116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatoblastoma","secondary_identifiers":["UMLS:C0334489","ONCOTREE:PB","icd11.foundation:733863058","icd11.foundation:1310236105","MESH:C537162","MEDGEN:87250","NANDO:2200082","NCIT:C4265","DOID:6823","GARD:4210"],"synonyms":[{"name":"PB","type":"related"},{"name":"pancreatoblastoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0019035","xrefs":{"Monarch":{"xref_id":"0019035"}}}


id: PBO:0012605
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TPI1","termid":"PBO:0012605"}


id: GO:1904078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24530842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"regulation of estrogen biosynthetic process","termid":"GO:1904076"},{"relation_name":"positively_regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of estrogen biosynthetic process","synonyms":[{"name":"activation of estrogen anabolism","type":"narrow"},{"name":"activation of estrogen biosynthesis","type":"narrow"},{"name":"activation of estrogen biosynthetic process","type":"narrow"},{"name":"activation of estrogen formation","type":"narrow"},{"name":"activation of estrogen synthesis","type":"narrow"},{"name":"activation of oestrogen biosynthesis","type":"narrow"},{"name":"activation of oestrogen biosynthetic process","type":"narrow"},{"name":"positive regulation of estrogen anabolism","type":"exact"},{"name":"positive regulation of estrogen biosynthesis","type":"exact"},{"name":"positive regulation of estrogen formation","type":"exact"},{"name":"positive regulation of estrogen synthesis","type":"exact"},{"name":"positive regulation of oestrogen biosynthesis","type":"exact"},{"name":"positive regulation of oestrogen biosynthetic process","type":"exact"},{"name":"up regulation of estrogen anabolism","type":"exact"},{"name":"up regulation of estrogen biosynthesis","type":"exact"},{"name":"up regulation of estrogen biosynthetic process","type":"exact"},{"name":"up regulation of estrogen formation","type":"exact"},{"name":"up regulation of estrogen synthesis","type":"exact"},{"name":"up regulation of oestrogen biosynthesis","type":"exact"},{"name":"up regulation of oestrogen biosynthetic process","type":"exact"},{"name":"up-regulation of estrogen anabolism","type":"exact"},{"name":"up-regulation of estrogen biosynthesis","type":"exact"},{"name":"up-regulation of estrogen biosynthetic process","type":"exact"},{"name":"up-regulation of estrogen formation","type":"exact"},{"name":"up-regulation of estrogen synthesis","type":"exact"},{"name":"up-regulation of oestrogen biosynthesis","type":"exact"},{"name":"up-regulation of oestrogen biosynthetic process","type":"exact"},{"name":"upregulation of estrogen anabolism","type":"exact"},{"name":"upregulation of estrogen biosynthesis","type":"exact"},{"name":"upregulation of estrogen biosynthetic process","type":"exact"},{"name":"upregulation of estrogen formation","type":"exact"},{"name":"upregulation of estrogen synthesis","type":"exact"},{"name":"upregulation of oestrogen biosynthesis","type":"exact"},{"name":"upregulation of oestrogen biosynthetic process","type":"exact"}],"termid":"GO:1904078"}


id: FYPO:0006488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"increased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"increased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006488"}


id: PBO:0071235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 76","termid":"PBO:0071235"}


id: GO:2000001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA damage checkpoint","synonyms":[{"name":"regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000001"}


id: PBO:0088290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26","termid":"PBO:0088290"}


id: MONDO:0005494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast carcinoma which is negative for expression of estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progesterone-receptor negative breast cancer","termid":"MONDO:0000616"},{"relation_name":"is_a","term_name":"Her2-receptor negative breast cancer","termid":"MONDO:0000618"},{"relation_name":"is_a","term_name":"estrogen-receptor negative breast cancer","termid":"MONDO:0006513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"triple-negative breast carcinoma","secondary_identifiers":["NCIT:C71732","MEDGEN:1649548","SCTID:706970001","UMLS:C4722518","MESH:D064726","DOID:0060081","EFO:0005537"],"synonyms":[{"name":"triple-negative breast cancer","type":"exact"},{"name":"triple-negative breast carcinoma","type":"exact"},{"name":"triple-receptor negative breast cancer","type":"exact"}],"termid":"MONDO:0005494","xrefs":{"Monarch":{"xref_id":"0005494"}}}


id: GO:0046479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"},{"relation_name":"is_a","term_name":"glycolipid catabolic process","termid":"GO:0019377"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycosphingolipid catabolic process","secondary_identifiers":["Reactome:R-HSA-9840310"],"synonyms":[{"name":"glycosphingolipid breakdown","type":"exact"},{"name":"glycosphingolipid catabolism","type":"exact"},{"name":"glycosphingolipid degradation","type":"exact"}],"termid":"GO:0046479"}


id: PBO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 8","termid":"PBO:0046835"}


id: MONDO:0017650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare myoclonus (obsolete MONDO:0017650)","secondary_identifiers":["Orphanet:306747"],"termid":"MONDO:0017650","xrefs":{"Monarch":{"xref_id":"0017650"}}}


id: MONDO:0016317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete limbic encephalitis with NMDA receptor antibodies (obsolete MONDO:0016317)","termid":"MONDO:0016317","xrefs":{"Monarch":{"xref_id":"0016317"}}}


id: PBO:0079981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 19","termid":"PBO:0079981"}


id: GO:0009909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of shoot system development","termid":"GO:0048831"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flower development","termid":"GO:0009909"}


id: PR:O94490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C417.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.09c","synonyms":[{"name":"Spom972h-SPCC417.09c","type":"exact"}],"termid":"PR:O94490"}


id: PBO:0070081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 38, pseudogene","termid":"PBO:0070081"}


id: PBO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faster-evolving copy","termid":"PBO:0002347"}


id: GO:0008002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The electron-lucent layer of the basal lamina adjacent to the basal plasma membrane of the cells that rest on the lamina.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete lamina lucida (obsolete GO:0008002)","secondary_identifiers":["Wikipedia:Lamina_lucida"],"termid":"GO:0008002"}


id: PBO:0061337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B15","termid":"PBO:0061337"}


id: PBO:0068405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 224","termid":"PBO:0068405"}


id: PBO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase Jmj1 (predicted)","termid":"PBO:0001591"}


id: PR:Q9UTL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribose-5-phosphate isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01935","PANTHER:PTHR11934:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-5-phosphate isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.12","secondary_identifiers":["UniProtKB:Q9UTL3"],"synonyms":[{"name":"D-ribose-5-phosphate ketol-isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphoriboisomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPIA","type":"exact"}],"termid":"PR:Q9UTL3"}


id: GO:0098833
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the plasma membrane and underlying cytoplasm which surround the the active zone, into which synaptic vesicle membranes are recycled following exocytosis. It is especially enriched in endocytic proteins following intense activity.","definition_xrefs":["PMID:17455288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic endocytic zone","termid":"GO:0098833"}


id: GO:0032056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation in response to stress","synonyms":[{"name":"activation of translation in response to stress","type":"narrow"},{"name":"stimulation of translation in response to stress","type":"narrow"},{"name":"up regulation of translation in response to stress","type":"exact"},{"name":"up-regulation of translation in response to stress","type":"exact"},{"name":"upregulation of translation in response to stress","type":"exact"}],"termid":"GO:0032056"}


id: MONDO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia infiltrating the central nervous system structures.","definition_xrefs":["NCIT:C5440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system hematopoietic neoplasm","termid":"MONDO:0003641"},{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"central nervous system leukemia","secondary_identifiers":["UMLS:C1332884","MEDGEN:234102","DOID:12969"],"synonyms":[{"name":"CNS leukaemia","type":"exact"},{"name":"CNS leukemia","type":"exact"},{"name":"central nervous system leukaemia (disease)","type":"exact"},{"name":"central nervous system leukemia","type":"exact"},{"name":"central nervous system leukemia (disease)","type":"exact"},{"name":"leukaemia (disease) of central nervous system","type":"exact"},{"name":"leukaemia of CNS","type":"exact"},{"name":"leukaemia of central nervous system","type":"exact"},{"name":"leukaemia of the CNS","type":"exact"},{"name":"leukaemia of the central nervous system","type":"exact"},{"name":"leukemia (disease) of central nervous system","type":"exact"},{"name":"leukemia of CNS","type":"exact"},{"name":"leukemia of central nervous system","type":"exact"},{"name":"leukemia of the CNS","type":"exact"},{"name":"leukemia of the central nervous system","type":"exact"}],"termid":"MONDO:0001606","xrefs":{"Monarch":{"xref_id":"0001606"}}}


id: PBO:0091338
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.1625092_1625093insC","termid":"PBO:0091338"}


id: GO:0102264
data:
  {"annotated_genes":["SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106495],"is_not":false,"summary":null,"term":"GO:0102264"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil20 in tRNA + NAD(P) = H+ + a uracil20 in tRNA + NAD(P)H.","definition_xrefs":["EC:1.3.1.91","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0140101","GO:0016491"],"is_obsolete":false,"name":"tRNA-dihydrouridine20 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12456"],"termid":"GO:0102264","terms_by_termid":{"GO:0102264":null}}


id: PBO:0080171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 6","termid":"PBO:0080171"}


id: PBO:0027001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_prospore_membrane","termid":"PBO:0027001"}


id: PR:P55306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A catalase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11465:SF0","OMA:SCHPO04165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.07c","secondary_identifiers":["UniProtKB:P55306"],"synonyms":[{"name":"Spom972h-CAT","type":"exact"}],"termid":"PR:P55306"}


id: MONDO:0035777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare hepatic disease characterized by intrahepatic cholestasis and deterioration of liver function in patients receiving parenteral nutrition for extended periods of time (signs may appear as early as within the first two weeks of initiation of parenteral nutrition). The condition commonly occurs in neonates and usually resolves with transition to enteral feeding, although severe cases may progress to liver fibrosis, cirrhosis, and portal hypertension.","definition_xrefs":["Orphanet:567983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholestasis","termid":"MONDO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"parenteral nutrition-associated cholestasis","secondary_identifiers":["MEDGEN:475934","UMLS:C3274301","GARD:22295","icd11.foundation:1572634308"],"synonyms":[{"name":"PNAC","type":"exact"}],"termid":"MONDO:0035777","xrefs":{"Monarch":{"xref_id":"0035777"}}}


id: PBO:0038881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 7","termid":"PBO:0038881"}


id: FYPO:0000853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome positioning","synonyms":[{"name":"abnormal nucleosome occupancy","type":"related"},{"name":"abnormal nucleosome positioning during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing","type":"exact"}],"termid":"FYPO:0000853"}


id: GO:0034209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an acetyl group to a sterol molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:rb","PMID:18034159"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol acetylation (obsolete GO:0034209)","termid":"GO:0034209"}


id: PBO:0082825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved peptide N-glycanase; deglycosylating enzyme that cleaves N-glycans that are attached to misfolded ERAD substrate glycoproteins prior to proteasome-dependent degradation; localizes to the cytoplasm and nucleus; activity is enhanced by interaction with Rad23p; human ortholog NGLY1 is associated with a syndrome characterized by developmental delays, epilepsy, absence of tears and liver disease","termid":"PBO:0082825"}


id: FYPO:0002070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal nucleus positioning","termid":"FYPO:0001389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleus location","synonyms":[{"name":"normal nuclear location","type":"exact"},{"name":"normal nucleus location during mitotic cell cycle","type":"related"},{"name":"normal nucleus location during vegetative growth","type":"exact"},{"name":"normal nucleus position","type":"exact"},{"name":"normally localized nucleus","type":"exact"}],"termid":"FYPO:0002070"}


id: PBO:0015656
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.1x10^4 min-1 M-1","termid":"PBO:0015656"}


id: PBO:0059866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 3","termid":"PBO:0059866"}


id: PBO:0061264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 4","termid":"PBO:0061264"}


id: PBO:0068043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 348","termid":"PBO:0068043"}


id: FYPO:0002365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H4 acetylation occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H4 acetylation during vegetative growth","termid":"FYPO:0002364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002365"}


id: MONDO:0017870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supravalvular pulmonary stenosis","secondary_identifiers":["MEDGEN:481842","Orphanet:3192","UMLS:C3280212","NANDO:2200278","GARD:4594"],"synonyms":[{"name":"pulmonary supravalvular stenosis","type":"related"}],"termid":"MONDO:0017870","xrefs":{"Monarch":{"xref_id":"0017870"}}}


id: FYPO:0003202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction is not spatially and temporally coupled to division septum assembly as in wild type. The edges of the growing septum and the plasma membrane do not remain in contact, and septum assembly may be slower than ring contraction.","definition_xrefs":["PMID:24165938","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"actomyosin contractile ring contraction uncoupled from septum assembly","synonyms":[{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during vegetative growth","type":"exact"},{"name":"cytokinetic contractile ring contraction uncoupled from septum assembly","type":"exact"}],"termid":"FYPO:0003202"}


id: PBO:0078269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 5-1","termid":"PBO:0078269"}


id: GO:0061812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyclic ADP-ribose + H20 = ADP-ribose (ADPR).","definition_xrefs":["PMID:11866528","GOC:pad","GOC:PARL","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclic ADP-ribose hydrolase (obsolete GO:0061812)","termid":"GO:0061812"}


id: GO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a plasmacytoid dendritic cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002470"}


id: PBO:0027812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_mitotic_spindle_during_metaphase","termid":"PBO:0027812"}


id: MONDO:0011058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the COCH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 9","secondary_identifiers":["MESH:C563335","OMIM:601369","GARD:18105","DOID:0110593","MEDGEN:371327","UMLS:C1832425"],"synonyms":[{"name":"COCH autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA9","type":"narrow"},{"name":"autosomal dominant deafness 9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in COCH","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 9","type":"narrow"},{"name":"deafness, autosomal dominant 9","type":"narrow"},{"name":"deafness, autosomal dominant type 9","type":"narrow"}],"termid":"MONDO:0011058","xrefs":{"Monarch":{"xref_id":"0011058"}}}


id: PBO:0090861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GAP, GTPase activating protein for Arf6, Ucp3","termid":"PBO:0090861"}


id: MONDO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"},{"relation_name":"is_a","term_name":"benign neoplasm of spinal cord","termid":"MONDO:0021506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord intramedullary teratoma","secondary_identifiers":["NCIT:C5428","MEDGEN:233575","DOID:3639","UMLS:C1334259"],"synonyms":[{"name":"intramedullary spinal cord teratoma","type":"exact"},{"name":"intramedullary spinal teratoma","type":"exact"},{"name":"intramedullary teratoma of spinal cord","type":"exact"},{"name":"intramedullary teratoma of the spinal cord","type":"exact"}],"termid":"MONDO:0002717","xrefs":{"Monarch":{"xref_id":"0002717"}}}


id: MONDO:0014901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tooth agenesis in which the cause of the disease is a mutation in the WNT10B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, 8","secondary_identifiers":["GARD:18250","OMIM:617073","MEDGEN:934697","UMLS:C4310730"],"synonyms":[{"name":"STHAG8","type":"exact"},{"name":"WNT10B tooth agenesis","type":"exact"},{"name":"tooth agenesis caused by mutation in WNT10B","type":"exact"},{"name":"tooth agenesis, selective, 8","type":"exact"},{"name":"tooth agenesis, selective, 8; STHAG8","type":"exact"},{"name":"tooth agenesis, selective, type 8","type":"exact"}],"termid":"MONDO:0014901","xrefs":{"Monarch":{"xref_id":"0014901"}}}


id: PBO:0109194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofissin Atg44","termid":"PBO:0109194"}


id: GO:0048037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor binding (obsolete GO:0048037)","termid":"GO:0048037"}


id: MONDO:0010848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 5 (SCA5) is a rare subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by the early-onset of cerebellar signs with eye movement abnormalities and a very slow disease progression.","definition_xrefs":["Orphanet:98766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 5","secondary_identifiers":["OMIM:600224","GARD:4953","icd11.foundation:78905851","MEDGEN:155705","UMLS:C0752123","DOID:0050882","SCTID:719302009"],"synonyms":[{"name":"SCA5","type":"exact"},{"name":"spinocerebellar ataxia 5","type":"related"},{"name":"spinocerebellar ataxia type 5","type":"exact"}],"termid":"MONDO:0010848","xrefs":{"Monarch":{"xref_id":"0010848"}}}


id: MONDO:1011436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Histiocytosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytosis, non-human animal","secondary_identifiers":["OMIA:000474"],"termid":"MONDO:1011436","xrefs":{"Monarch":{"xref_id":"1011436"}}}


id: GO:0006532
data:
  {"annotated_genes":["SJAG_03306"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79393],"is_not":false,"summary":null,"term":"GO:0006532"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"aspartate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aspartate anabolism","type":"exact"},{"name":"aspartate biosynthesis","type":"exact"},{"name":"aspartate formation","type":"exact"},{"name":"aspartate synthesis","type":"exact"}],"termid":"GO:0006532","terms_by_termid":{"GO:0006532":null}}


id: FYECO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which aminolevulinic acid was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ aminolevulinic acid","secondary_identifiers":["PMID:29549126"],"synonyms":[{"name":"+ ALA","type":"exact"}],"termid":"FYECO:0000352"}


id: MONDO:0010046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 23 (SPG23) is a rare, complex type of hereditary spastic paraplegia that presents in childhood with progressive spastic paraplegia, associated with peripheral neuropathy, skin pigment abnormalities (i.e. vitiligo, hyperpigmentation, diffuse lentigines), premature graying of hair, and characteristic facies (i.e. thin with ''sharp'' features). The SPG23 phenotype has been mapped to a locus on chromosome 1q24-q32.","definition_xrefs":["Orphanet:101003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 23","secondary_identifiers":["UMLS:C0796019","DOID:0110774","MEDGEN:167094","OMIM:270750","MESH:C536859","SCTID:726608002","GARD:336"],"synonyms":[{"name":"DSTYK autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"Lison syndrome","type":"exact"},{"name":"SPG 23","type":"related"},{"name":"SPG23","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in DSTYK","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 23","type":"related"},{"name":"hereditary spastic paraplegia type 23","type":"exact"},{"name":"spastic paraparesis, vitiligo, premature graying, characteristic facies","type":"related"},{"name":"spastic paraparesis-vitiligo-premature graying-characteristic facies syndrome","type":"exact"},{"name":"spastic paraplegia 23","type":"exact"},{"name":"spastic paraplegia and pigmentary abnormalities","type":"related"},{"name":"spastic paraplegia vitiligo premature graying and characteristic facies","type":"related"},{"name":"spastic paraplegia vitiligo premature greying and characteristic facies","type":"related"},{"name":"spastic paraplegia with pigmentary abnormalities","type":"exact"}],"termid":"MONDO:0010046","xrefs":{"Monarch":{"xref_id":"0010046"}}}


id: MONDO:0010041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic ataxia of Charlevoix-Saguenay (ARSACS) is a neurodegenerative disorder characterized by early-onset cerebellar ataxia with spasticity, a pyramidal syndrome and peripheral neuropathy.","definition_xrefs":["Orphanet:98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"},{"relation_name":"is_a","term_name":"autosomal recessive spastic ataxia","termid":"MONDO:0017847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Charlevoix-Saguenay spastic ataxia","secondary_identifiers":["MEDGEN:338620","MESH:C536787","UMLS:C1849140","OMIM:270550","SCTID:702445005","DOID:0050946","GARD:4910"],"synonyms":[{"name":"ARSACS","type":"exact"},{"name":"Charlevoix-Saguenay spastic ataxia","type":"exact"},{"name":"SPAX6","type":"exact"},{"name":"autosomal recessive spastic ataxia of Charlevoix-Saguenay","type":"related"},{"name":"autosomal recessive spastic ataxia type 6","type":"exact"},{"name":"sacs","type":"related"},{"name":"spastic ataxia 6, autosomal recessive","type":"related"},{"name":"spastic ataxia Charlevoix-Saguenay type","type":"related"},{"name":"spastic ataxia of Charlevoix-Saguenay","type":"related"},{"name":"spastic ataxia, Charlevoix-Saguenay type","type":"related"}],"termid":"MONDO:0010041","xrefs":{"Monarch":{"xref_id":"0010041"}}}


id: GO:0010420
data:
  {"annotated_genes":["SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78312],"is_not":false,"summary":null,"term":"GO:0010420"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3,4-dihydroxy-5-all-trans-polyprenylbenzoate + S-adenosyl-L-methionine = a 3-methoxy,4-hydroxy-5-all-trans-polyprenylbenzoate + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:9628017","PMID:10419476","RHEA:44452","PMID:23190198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"polyprenyldihydroxybenzoate methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:1990886","EC:2.1.1.114","MetaCyc:RXN-9281","Reactome:R-HSA-2162193"],"synonyms":[{"name":"3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity","type":"exact"}],"termid":"GO:0010420","terms_by_termid":{"GO:0010420":null}}


id: FYPO:0006932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of butylated hydroxyanisole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to butylated hydroxyanisole","synonyms":[{"name":"resistance to BHA","type":"exact"},{"name":"resistance to butylated hydroxyanisole during mitotic cell cycle","type":"related"},{"name":"resistance to butylated hydroxyanisole during vegetative growth","type":"exact"},{"name":"resistant to BHA","type":"exact"},{"name":"resistant to butylated hydroxyanisole","type":"exact"}],"termid":"FYPO:0006932"}


id: MONDO:0043009
data:
  {"annotated_genes":["SJAG_03557","SJAG_00773","SJAG_02712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87202,87203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012980"},{"annotations":[87160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"}]},"cv_name":"mondo","definition":"An instance of lethal multiple congenital anomalies/dysmorphic syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_02712":null,"SJAG_03557":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21947","MEDGEN:1843298","UMLS:C5681265","Orphanet:471383"],"synonyms":[{"name":"genetic lethal multiple congenital anomalies/dysmorphic syndrome","type":"exact"}],"termid":"MONDO:0043009","terms_by_termid":{"MONDO:0012980":null,"MONDO:0014552":null},"xrefs":{"Monarch":{"xref_id":"0043009"}}}


id: MONDO:0012619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 11","secondary_identifiers":["DOID:0081186","MEDGEN:369677","UMLS:C1970193","MESH:C567012","GARD:22546","OMIM:611097"],"synonyms":[{"name":"MRT11","type":"exact"},{"name":"intellectual disability, autosomal recessive 11","type":"exact"},{"name":"mental retardation, autosomal recessive 11","type":"related"},{"name":"mental retardation, autosomal recessive, 11","type":"exact"}],"termid":"MONDO:0012619","xrefs":{"Monarch":{"xref_id":"0012619"}}}


id: PBO:0113419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that modulates mRNA stability; regulates cell cycle, sister chromatid cohesion, and stress response genes; modulates stability and translational efficiency of CLN3 mRNA; colocalizes with P-bodies/stress granules to regulate target mRNAs; regulates cell fate and critical cell size for Start passage; regulates ploidy; self-templating mnemon that forms inactive super-assemblies, preventing G1 arrest in mother cells after unsuccessful mating and causing sterility in old cells","termid":"PBO:0113419"}


id: PBO:0048323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 34","termid":"PBO:0048323"}


id: PATO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape in which the bearer's surface is highly topographical with ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornamentation","termid":"PATO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornamented","termid":"PATO:0002441"}


id: PBO:0047661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 14","termid":"PBO:0047661"}


id: PBO:0066463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 1","termid":"PBO:0066463"}


id: PBO:0072502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 31","termid":"PBO:0072502"}


id: GO:0018379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of cytochromes and other heme proteins to heme via heme-bis-L-cysteine.","definition_xrefs":["RESID:AA0134"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c-heme linkage via heme-bis-L-cysteine (obsolete GO:0018379)","synonyms":[{"name":"cytochrome c-haem linkage via haem-bis-L-cysteine","type":"exact"}],"termid":"GO:0018379"}


id: PR:P23880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds21 gene.","definition_xrefs":["UniProtKB:P23880","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.05c","synonyms":[{"name":"Spom972h-sds21","type":"exact"},{"name":"suppressor protein SDS21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23880"}


id: GO:0010726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"positive regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010726"}


id: MONDO:0013152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 14","secondary_identifiers":["OMIM:613145","UMLS:C2751054","MEDGEN:413921"],"synonyms":[{"name":"SLEB14","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 14","type":"exact"}],"termid":"MONDO:0013152","xrefs":{"Monarch":{"xref_id":"0013152"}}}


id: GO:0014018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuroblast in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"neuroblast fate commitment","termid":"GO:0014017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate specification","termid":"GO:0014018"}


id: PR:Q9P6I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic non-specific dipeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11014:SF15","OMA:SCHPO02354","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cys-Gly metallodipeptidase dug1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.08","secondary_identifiers":["UniProtKB:Q9P6I2"],"synonyms":[{"name":"GSH degradosomal complex subunit DUG1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CNDP2","type":"exact"}],"termid":"PR:Q9P6I2"}


id: PATO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled inwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involute","termid":"PATO:0001962"}


id: PR:Q9USQ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-tubulin complex component 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.20c","secondary_identifiers":["UniProtKB:Q9USQ2"],"synonyms":[{"name":"Spom972h-TUBGCP3","type":"exact"},{"name":"altered polarity protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ2"}


id: PR:O74836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl101 gene.","definition_xrefs":["UniProtKB:O74836","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L1-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.08c","synonyms":[{"name":"L10a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl101","type":"exact"}],"termid":"PR:O74836"}


id: MONDO:0031213
data:
  {"annotated_genes":["SJAG_03396"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800042"}]},"cv_name":"mondo","definition":"A congenital genodermatosis with skin/mucosae involvement, characterized by very tight and thin skin with erosions and scaling, associated to a typical facial dysmorphism, arthrogryposis multiplex, fetal akinesia or hypokinesia deformation sequence (FADS) and pulmonary hypoplasia without neurological abnormalities.","definition_xrefs":["Orphanet:1662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03396":null},"genotype_count":0,"is_obsolete":false,"name":"restrictive dermopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:275210","UMLS:C0406585","DOID:0060762","GARD:1516","MEDGEN:98356"],"synonyms":[{"name":"hyperkeratosis-contracture syndrome","type":"narrow"},{"name":"lethal hyperkeratosis-contracture syndrome","type":"exact"},{"name":"lethal restrictive dermopathy","type":"exact"},{"name":"lethal tight skin-contracture syndrome","type":"exact"},{"name":"tight skin contracture syndrome","type":"exact"}],"termid":"MONDO:0031213","terms_by_termid":{"MONDO:0800042":null},"xrefs":{"Monarch":{"xref_id":"0031213"}}}


id: PBO:0003430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug97","termid":"PBO:0003430"}


id: MONDO:0005720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mild, eruptive skin disease of milk cows caused by cowpox virus, with lesions occurring principally on the udder and teats. Human infection may occur while milking an infected animal.","definition_xrefs":["MESH:D015605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cowpox","secondary_identifiers":["UMLS:C0010232","SCTID:70090004","DOID:8956","MEDGEN:3261","ICD9:051.01","icd11.foundation:1205745537","EFO:0007225","ICD10CM:B08.010"],"synonyms":[{"name":"yaba","type":"exact"}],"termid":"MONDO:0005720","xrefs":{"Monarch":{"xref_id":"0005720"}}}


id: MONDO:0019240
data:
  {"annotated_genes":["SJAG_04810","SJAG_03024","SJAG_04865","SJAG_02855","SJAG_03509","SJAG_01474","SJAG_03018","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[88496,88497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[88361,88362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[86794,86795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[88986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sterol biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"sterol metabolism disorder","termid":"MONDO:0019256"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"sterol biosynthesis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843040","Orphanet:79195","UMLS:C5681287","GARD:18969"],"synonyms":[{"name":"inborn error of sterol biosynthetic process","type":"exact"},{"name":"inborn sterol biosynthetic process disorder","type":"exact"},{"name":"rare inborn error of sterol biosynthetic process","type":"exact"}],"termid":"MONDO:0019240","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0019240"}}}


id: PBO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-10 (pseudogene)","termid":"PBO:0051357"}


id: GO:0034995
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consist of complement components C5b6 and C7 stably inserted in a cell membrane. Formation of the SC5b-7 complex is the first phase of membrane attack complex assembly.","definition_xrefs":["PMID:10090939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"SC5b-7 complex","termid":"GO:0034995"}


id: PBO:0066542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 7","termid":"PBO:0066542"}


id: PBO:0057530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR646 host gene","termid":"PBO:0057530"}


id: GO:0009388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete antisense RNA (obsolete GO:0009388)","synonyms":[{"name":"antisense RNA","type":"exact"}],"termid":"GO:0009388"}


id: GO:1903969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["GOC:TermGenie","PMID:19100238","GO_REF:0000058","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"regulation of response to M-CSF","type":"exact"},{"name":"regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903969"}


id: FYPO:0005626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light during S phase of the mitotic cell cycle. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","termid":"FYPO:0005299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint response after UV irradiation during S phase","type":"exact"}],"termid":"FYPO:0005626"}


id: PBO:0049006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein hormone subunit alpha 2","termid":"PBO:0049006"}


id: PBO:0059554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Val (GUN)","termid":"PBO:0059554"}


id: MONDO:0009211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor VII (FVII) deficiency is a rare hereditary hemorrhagic disease caused by the diminution or absence of this coagulation factor.","definition_xrefs":["Orphanet:327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor VII deficiency","termid":"MONDO:0002244"},{"relation_name":"is_a","term_name":"congenital vitamin K-dependent coagulation factors deficiency","termid":"MONDO:0015722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital factor VII deficiency","secondary_identifiers":["DOID:2215","MEDGEN:473015","OMIM:227500","NCIT:C131631","GARD:2238","UMLS:C0272320","MedDRA:10016079"],"synonyms":[{"name":"F7 deficiency","type":"related"},{"name":"congenital factor VII deficiency","type":"exact"},{"name":"congenital proconvertin deficiency","type":"exact"},{"name":"factor 7 deficiency","type":"related"},{"name":"factor VII deficiency","type":"related"},{"name":"hypoproconvertinemia","type":"exact"}],"termid":"MONDO:0009211","xrefs":{"Monarch":{"xref_id":"0009211"}}}


id: PBO:0003690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3H1 type","termid":"PBO:0003690"}


id: MONDO:0013333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An often asymptomatic developmental abnormality of the cervical spine. It is characterized by the hypoplasia of the odontoid which appears as a stubby peg of an odontoid process. Symptoms may develop after minor trauma and include localized neck pain, atlantoaxial instability, and transient or permanent neurologic manifestations.","definition_xrefs":["NCIT:C86969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"odontoid hypoplasia","secondary_identifiers":["MEDGEN:339524","OMIM:613628","UMLS:C1846439"],"synonyms":[{"name":"odontoid hypoplasia","type":"exact"}],"termid":"MONDO:0013333","xrefs":{"Monarch":{"xref_id":"0013333"}}}


id: PBO:0040601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 5","termid":"PBO:0040601"}


id: PBO:0040270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM interactor","termid":"PBO:0040270"}


id: MONDO:0100464
data:
  {"annotated_genes":["SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[87943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"}]},"cv_name":"mondo","definition":"An autosomal recessive lysosomal disease caused by biallelic loss of function variants in the SMPD1 gene. Clinical symptoms in affected individuals occur along a continuum. At the severe end of the spectrum are individuals historically diagnosed with Niemann-Pick disease type A (the neurovisceral form), which is characterized by hepatosplenomegaly with rapid neurological deterioration leading to death in the first few years of life. At the milder end of the spectrum are individuals historically diagnosed with Niemann-Pick disease type B, a later-onset, chronic visceral form, characterized by progressive visceral organ symptoms including hepatosplenomegaly and pulmonary insufficiency, and survival into adulthood. In addition, some affected individuals present with an intermediate phenotype, Niemann-Pick disease type A/B.","definition_xrefs":["PMID:34654332","PMID:20301544","PMID:28406489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease","termid":"MONDO:0001982"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0005046","MONDO:0002561"],"is_obsolete":false,"name":"acid sphingomyelinase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1800807","UMLS:C5243927"],"termid":"MONDO:0100464","terms_by_termid":{"MONDO:0009756":null,"MONDO:0011871":null},"xrefs":{"Monarch":{"xref_id":"0100464"}}}


id: PBO:0089887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein, claudin Dni1","termid":"PBO:0089887"}


id: PBO:0042220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 1","termid":"PBO:0042220"}


id: PBO:0038434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase","termid":"PBO:0038434"}


id: GO:1901068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanosine-containing compounds (guanosines).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"guanosine-containing compound metabolic process","synonyms":[{"name":"guanosine-containing compound metabolism","type":"exact"},{"name":"guanosines metabolic process","type":"exact"},{"name":"guanosines metabolism","type":"exact"}],"termid":"GO:1901068"}


id: MONDO:0015523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade malignant blood vessel neoplasm. It is characterized by the presence of epithelioid endothelial cells. The neoplastic cells are arranged in cords and nests, which are embedded in a myxoid to hyalinized stroma.","definition_xrefs":["NCIT:C3800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"hemangioendothelioma","termid":"MONDO:0021121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelioid hemangioendothelioma","secondary_identifiers":["ONCOTREE:EHAE","Orphanet:157791","DOID:0080190","MEDGEN:569676","ICDO:9133/3","SCTID:54124005","ICDO:9133/1","NORD:124536","SCTID:403981003","MESH:D018323","GARD:20014","ICDO:9130/3","UMLS:C0334538"],"synonyms":[{"name":"epithelioid angioendothelioma","type":"exact"},{"name":"epithelioid angiosarcoma","type":"exact"},{"name":"epithelioid hemangioendothelioma","type":"exact"},{"name":"malignant epithelioid hemangioendothelioma","type":"exact"}],"termid":"MONDO:0015523","xrefs":{"Monarch":{"xref_id":"0015523"}}}


id: SO:1000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The changed codon has the same translation product as the original codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000057 sequence_variant_causing_synonymous_codon_change_in_transcript (obsolete SO:1000057)","synonyms":[{"name":"mutation causing synonymous codon change in transcript","type":"related"},{"name":"sequence variant causing synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000057"}


id: PBO:0016903
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 RNA level regulated post-transcriptionally","termid":"PBO:0016903"}


id: GO:1905647
data:
  {"annotated_genes":["SJAG_04718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102140],"is_not":false,"summary":null,"term":"GO:1905647"}]},"cv_name":"biological_process","definition":"The directed movement of proline from outside of a cell into the cytoplasmic compartment.","definition_xrefs":["PMID:24344203","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline transmembrane transport","termid":"GO:0035524"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"proline import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902825"],"synonyms":[{"name":"proline import into cell","type":"exact"}],"termid":"GO:1905647","terms_by_termid":{"GO:1905647":null}}


id: PBO:0081689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 610","termid":"PBO:0081689"}


id: GO:0061409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a freezing stimulus, temperatures below 0 degrees Celsius.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to freezing (obsolete GO:0061409)","termid":"GO:0061409"}


id: MONDO:0032649
data:
  {"annotated_genes":["SJAG_00624"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88005],"is_not":false,"summary":null,"term":"MONDO:0032649"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00624":null},"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16335","MEDGEN:1648477","DOID:0080582","OMIM:618275","UMLS:C4748930"],"synonyms":[{"name":"HYPOTRICHOSIS 14","type":"related"},{"name":"HYPT14","type":"related"}],"termid":"MONDO:0032649","terms_by_termid":{"MONDO:0032649":null},"xrefs":{"Monarch":{"xref_id":"0032649"}}}


id: PBO:0075549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 1","termid":"PBO:0075549"}


id: PBO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase Tkt1","termid":"PBO:0090424"}


id: PBO:0064030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 64","termid":"PBO:0064030"}


id: GO:0008125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins, including elastin. Preferential cleavage: Ala-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase I activity (obsolete GO:0008125)","synonyms":[{"name":"elaszym","type":"related"},{"name":"pancreatic elastase I activity","type":"exact"},{"name":"pancreatopeptidase E activity","type":"related"},{"name":"serine elastase","type":"broad"}],"termid":"GO:0008125"}


id: PBO:0064718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 54","termid":"PBO:0064718"}


id: GO:1990117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["PMID:15214043","GOC:BHF","GOC:rl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"},{"relation_name":"part_of","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"B cell receptor apoptotic signaling pathway","synonyms":[{"name":"B cell receptor extrinsic apoptotic signaling pathway","type":"exact"},{"name":"extrinsic apoptotic signaling pathway via B cell antigen receptor","type":"related"},{"name":"extrinsic apoptotic signaling pathway via BCR","type":"related"}],"termid":"GO:1990117"}


id: MONDO:0975874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies, absent speech and ambulation, and brain abnormalities","secondary_identifiers":["OMIM:621012"],"termid":"MONDO:0975874","xrefs":{"Monarch":{"xref_id":"0975874"}}}


id: PBO:0031807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_passage_through_START_of_mitotic_cell_cycle","termid":"PBO:0031807"}


id: GO:0016606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that is enriched in the lymphoid cell-specific protein LYSp100B; LANDs are globular, electron-dense structures and are morphologically distinct from the annular structures characteristic of PML bodies.","definition_xrefs":["PMID:8695863","PMID:10921892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"LYSP100-associated nuclear domain","synonyms":[{"name":"LANDs","type":"exact"}],"termid":"GO:0016606"}


id: PATO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality that inheres in a bearer by virtue of the bearer's containing hollow areas.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure, cavities","termid":"PATO:0002014"}


id: MONDO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary necrotic tumor of the liver is a rare nonmalignant hepatic lesion characterized by a mass with a completely necrotic core often partially calcified, surrounded by a dense hyalinized fibrous capsule containing elastin fibers. Patients are usually asymptomatic but some may suffer from intermittent abdominal pain or discomfort.","definition_xrefs":["Orphanet:100035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"solitary necrotic nodule of the liver","secondary_identifiers":["MEDGEN:755361","SCTID:447058001","UMLS:C2960192","icd11.foundation:209168589","GARD:19743"],"synonyms":[{"name":"hepatic solitary necrotic nodule","type":"exact"}],"termid":"MONDO:0015049","xrefs":{"Monarch":{"xref_id":"0015049"}}}


id: PBO:0028818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_replication_forks_during_cellular_response_to_hydroxyurea","termid":"PBO:0028818"}


id: PBO:0046804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII associated 2","termid":"PBO:0046804"}


id: MONDO:0018872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute megakaryoblastic leukemia (AMKL) is a form of acute myeloid leukemia (AML) that occurs predominantly in childhood and particularly in children with Down syndrome (DS-AMKL). Nonspecific symptoms may be irritability, weakness, and dizziness while specific symptoms include pallor, fever, mucocutaneous bleeding, hepatosplenomegaly, neurological manifestations and rarely lymphadenopathy. Acute panmyelosis with myelofibrosis may also be associated with AMKL. In contrast to DS-AMKL (around 80 % survival), non-DS-AMKL is an AML subgroup associated with poor prognosis.","definition_xrefs":["Orphanet:518"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute megakaryoblastic leukemia","secondary_identifiers":["NCIT:C3170","ONCOTREE:AMKL","EFO:0003025","GARD:524","icd11.foundation:2057381869","MESH:D007947","SCTID:277602003","UMLS:C0023462","ICD10CM:C94.2","ICD9:207.2","Wikipedia:Acute_megakaryoblastic_leukemia","MEDGEN:44124","NANDO:2200011","DOID:8761","ICDO:9910/3","MedDRA:10060556"],"synonyms":[{"name":"AMKL","type":"exact"},{"name":"AML M7","type":"exact"},{"name":"FAB M7","type":"exact"},{"name":"acute M7 myeloid leukaemia","type":"exact"},{"name":"acute M7 myeloid leukemia","type":"exact"},{"name":"acute megakaryoblastic leukaemia (FAB type M7)","type":"exact"},{"name":"acute megakaryoblastic leukemia","type":"exact"},{"name":"acute megakaryoblastic leukemia (FAB type M7)","type":"exact"},{"name":"acute megakaryoblastic leukemia, FAB M7","type":"exact"},{"name":"acute megakaryocytic leukaemia","type":"exact"},{"name":"acute megakaryocytic leukemia","type":"exact"},{"name":"acute megakaryocytic leukemias","type":"exact"},{"name":"acute myeloblastic leukaemia type 7","type":"related"},{"name":"acute myeloblastic leukemia type 7","type":"related"},{"name":"acute myeloid leukaemia M7","type":"exact"},{"name":"acute myeloid leukemia M7","type":"exact"},{"name":"leukemia, megakaryocytic, malignant","type":"exact"},{"name":"megakaryocytic leukaemia","type":"related"},{"name":"megakaryocytic leukemia","type":"related"},{"name":"megakaryocytic myelosis","type":"exact"},{"name":"thrombocytic leukaemia","type":"exact"},{"name":"thrombocytic leukemia","type":"exact"}],"termid":"MONDO:0018872","xrefs":{"Monarch":{"xref_id":"0018872"}}}


id: PBO:0039374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antagonist of mitotic exit network 1 homolog","termid":"PBO:0039374"}


id: PBO:0075212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin beta 2","termid":"PBO:0075212"}


id: GO:0070797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cleistothecium development","termid":"GO:0070796"},{"relation_name":"is_a","term_name":"negative regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902059"},{"relation_name":"negatively_regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cleistothecium development","termid":"GO:0070797"}


id: PBO:0084016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoprotein involved in cell wall beta-glucan assembly; null mutation leads to severe growth defects, aberrant multibudded morphology, and mating defects","termid":"PBO:0084016"}


id: MONDO:0040673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that affects the peritoneum.","definition_xrefs":["NCIT:C136410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneum cancer","termid":"MONDO:0002087"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant peritoneal germ cell tumor","secondary_identifiers":["MEDGEN:1612836","UMLS:C4526657"],"synonyms":[{"name":"malignant peritoneal germ cell tumor","type":"exact"}],"termid":"MONDO:0040673","xrefs":{"Monarch":{"xref_id":"0040673"}}}


id: PBO:0063534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing ring finger 3","termid":"PBO:0063534"}


id: GO:0008479
data:
  {"annotated_genes":["SJAG_06284","SJAG_00683"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74290,97575],"is_not":false,"summary":null,"term":"GO:0008479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine34 in tRNA + queuine = guanine + queuosine34 in tRNA.","definition_xrefs":["RHEA:16633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016740","GO:0016757","GO:0140101"],"is_obsolete":false,"name":"tRNA-guanosine(34) queuine transglycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.2.64","MetaCyc:QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN","Reactome:R-HSA-6782443"],"synonyms":[{"name":"Q-insertase","type":"broad"},{"name":"TGT","type":"broad"},{"name":"eTGT","type":"exact"},{"name":"guanine insertion enzyme","type":"related"},{"name":"queuine tRNA-ribosyltransferase","type":"exact"},{"name":"queuine tRNA-ribosyltransferase activity","type":"broad"},{"name":"queuine(34) transfer ribonucleate ribosyltransferase","type":"exact"},{"name":"tRNA guanine transglycosylase","type":"broad"},{"name":"tRNA transglycosylase","type":"broad"},{"name":"tRNA-guanosine(34) queuine transglycosylase","type":"exact"}],"termid":"GO:0008479","terms_by_termid":{"GO:0008479":null}}


id: PBO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner MTOC Attachment site","termid":"PBO:0005688"}


id: PBO:0003414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc knuckle TRAMP complex subunit Air1","termid":"PBO:0003414"}


id: PBO:0066444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV1 DNA directed polymerase","termid":"PBO:0066444"}


id: PBO:0051608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 32","termid":"PBO:0051608"}


id: MONDO:0007084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial focal alopecia","secondary_identifiers":["OMIM:104110","UMLS:C1863092","MESH:C566301","MEDGEN:350835"],"synonyms":[{"name":"ALPF","type":"related"},{"name":"alopecia, familial focal","type":"exact"}],"termid":"MONDO:0007084","xrefs":{"Monarch":{"xref_id":"0007084"}}}


id: GO:0051265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diolein + mono-olein = triolein + glycerol. Mono-olein, also known as mono-oleoylglycerol, is the monoglyceride formed from oleic acid, 9-octodecenoic acid; diolein is also known as dioleoylglycerol, and triolein as trioleoylglycerol and olein.","definition_xrefs":["GOC:ai","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"diolein transacylation activity","synonyms":[{"name":"DOG transacylation","type":"exact"},{"name":"acyl-CoA-independent diolein transacylation","type":"exact"},{"name":"dioleoylglycerol O-acyltransferase activity","type":"exact"},{"name":"dioleoylglycerol transacylase activity","type":"exact"}],"termid":"GO:0051265"}


id: PBO:0048026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled related protein","termid":"PBO:0048026"}


id: PBO:0073501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small glutamine rich tetratricopeptide repeat co-chaperone beta","termid":"PBO:0073501"}


id: MONDO:1011449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunoglobulin A glomerulonephropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis, non-human animal","termid":"MONDO:1010258"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin A glomerulonephropathy, non-human animal","secondary_identifiers":["OMIA:000553"],"termid":"MONDO:1011449","xrefs":{"Monarch":{"xref_id":"1011449"}}}


id: PBO:0070129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 43 pseudogene","termid":"PBO:0070129"}


id: PBO:0051526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 2","termid":"PBO:0051526"}


id: PBO:0056281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2C member 1","termid":"PBO:0056281"}


id: PBO:0058237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4525","termid":"PBO:0058237"}


id: FYPO:0006613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II occurs to a lower extent than normal. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["GO:0006369","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"},{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased termination of RNA polymerase II transcription","synonyms":[{"name":"decreased RNA polymerase II transcription termination","type":"exact"},{"name":"decreased termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"decreased termination of RNA polymerase II transcription during vegetative growth","type":"exact"},{"name":"reduced termination of RNA polymerase II transcription","type":"exact"}],"termid":"FYPO:0006613"}


id: GO:1901420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to alcohol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"negatively_regulates","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to alcohol","synonyms":[{"name":"down regulation of response to alcohol","type":"exact"},{"name":"down-regulation of response to alcohol","type":"exact"},{"name":"downregulation of response to alcohol","type":"exact"},{"name":"inhibition of response to alcohol","type":"narrow"}],"termid":"GO:1901420"}


id: PATO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex quadrilateral is a parallelogram if and only if any one of the following statements are true:\\n1. Each diagonal divides the quadrilateral into two congruent triangles with the same orientation.\\n2. The opposite sides are congruent in pairs.\\n3. The diagonals bisect each other.\\n4. The opposite angles are congruent in pairs.\\n5. The sum of the squares of the sides equals the sum of the squares of the diagonals. (This is the parallelogram law)\\n6.It possesses rotational symmetry.\\n7.One pair of opposite sides are parallel and congruent.\\n8.Two pairs of adjacent angles are supplementary.","definition_xrefs":["wikipedia:Parallelogram"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parallelogram","termid":"PATO:0002317"}


id: MONDO:0004687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"background diabetic retinopathy","termid":"MONDO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"severe nonproliferative diabetic retinopathy","secondary_identifiers":["DOID:8946","UMLS:C0730278","ICD9:362.06","SCTID:312905005","MEDGEN:676487","icd11.foundation:561966379"],"synonyms":[{"name":"high risk non proliferative diabetic retinopathy","type":"exact"},{"name":"severe NPDR","type":"exact"},{"name":"severe nonproliferative diabetic retinopathy","type":"exact"},{"name":"severe nonproliferative retinopathy","type":"related"},{"name":"severe npdr","type":"related"}],"termid":"MONDO:0004687","xrefs":{"Monarch":{"xref_id":"0004687"}}}


id: PBO:0004802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM-associated protein Mcm10","termid":"PBO:0004802"}


id: PBO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 30","termid":"PBO:0072153"}


id: GO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytosine metabolic process","synonyms":[{"name":"cytosine metabolism","type":"exact"}],"termid":"GO:0019858"}


id: GO:0004009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-binding cassette (ABC) transporter activity (obsolete GO:0004009)","synonyms":[{"name":"ATP-binding cassette (ABC) transporter activity","type":"exact"}],"termid":"GO:0004009"}


id: PBO:0076732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 1","termid":"PBO:0076732"}


id: GO:0010702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the breakdown of tissues; usually, if not always, accompanied by cell death.","definition_xrefs":["GOC:rl","GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histolysis (obsolete GO:0010702)","termid":"GO:0010702"}


id: GO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to histone deacetylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"histone deacetylase binding","termid":"GO:0042826"}


id: GO:1905507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cytoplasmic sequestering of protein that is involved in mitotic G2 DNA damage checkpoint.","definition_xrefs":["GO_REF:0000060","PMID:10523629","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of protein involved in mitotic G2 DNA damage checkpoint (obsolete GO:1905507)","termid":"GO:1905507"}


id: GO:0097021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.","definition_xrefs":["GOC:pr","PMID:18379575","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration into lymphoid organs","synonyms":[{"name":"lymphocyte homing","type":"narrow"}],"termid":"GO:0097021"}


id: PBO:0067698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 6","termid":"PBO:0067698"}


id: GO:0022607
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data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); involved in DNA mismatch repair during slow growth; weak similarity to Msh1p; structural study suggests Hsm3p is a scaffold protein for Rpt1p-Rpt2p complex formation; ortholog of human 19S subunit S5b","termid":"PBO:0083835"}


id: GO:0008512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + H+(out) = sulfate(in) + H+(in).","definition_xrefs":["TC:2.A.53.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sulfate:proton symporter activity","secondary_identifiers":["RHEA:28574"],"synonyms":[{"name":"sulfate/hydrogen symporter activity","type":"exact"},{"name":"sulfate:hydrogen symporter activity","type":"exact"},{"name":"sulphate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0008512"}


id: MONDO:0060642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features","secondary_identifiers":["UMLS:C4693405","OMIM:617865","MEDGEN:1647077"],"synonyms":[{"name":"NEDMAGA","type":"related"},{"name":"neurodevelopmental disorder with movement abnormalities, abnormal gait, and autistic features","type":"exact"}],"termid":"MONDO:0060642","xrefs":{"Monarch":{"xref_id":"0060642"}}}


id: PBO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved protein","termid":"PBO:0002420"}


id: GO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["PMID:9133426","PMID:12154375","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell activation","synonyms":[{"name":"regulation of NK T lymphocyte activation","type":"exact"},{"name":"regulation of NK T-cell activation","type":"exact"},{"name":"regulation of NK T-lymphocyte activation","type":"exact"},{"name":"regulation of NKT cell activation","type":"exact"},{"name":"regulation of NT cell activation","type":"exact"},{"name":"regulation of natural T cell activation","type":"exact"},{"name":"regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051133"}


id: PBO:0082435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Broad-specificity, low-affinity amino acid permease; minor serine permease with major contributions from paralog Gnp1p; involved in uptake of asparagine, glutamine, and other amino acids; expression induced by amino acids and regulated by SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p)","termid":"PBO:0082435"}


id: MONDO:0020290
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"}]},"cv_name":"mondo","definition":"A spectrum of septal defects involving the atrial septum; ventricular septum; and the atrioventricular valves (tricuspid valve; bicuspid valve). These defects are due to incomplete growth and fusion of the endocardial cushions which are important in the formation of two atrioventricular canals, site of future atrioventricular valves.","definition_xrefs":["MESH:D004694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart septal defect","termid":"MONDO:0002078"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial atrioventricular septal defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C101029","DOID:0050651","OMIMPS:606215","ICD9:745.6","ICD9:745.60","ICD9:745.69","NORD:821","Orphanet:98722","GARD:802","ICD10CM:Q21.2","SCTID:15459006"],"synonyms":[{"name":"AV septal defect","type":"narrow"},{"name":"AVCD","type":"narrow"},{"name":"AVSD","type":"narrow"},{"name":"Atrioventricular Septal Defect","type":"exact"},{"name":"ECD","type":"narrow"},{"name":"atrioventricular canal defect","type":"narrow"},{"name":"atrioventricular septal defect","type":"narrow"},{"name":"common AV canal","type":"narrow"},{"name":"common atrioventricular canal","type":"narrow"},{"name":"endocardial cushion defect","type":"narrow"}],"termid":"MONDO:0020290","terms_by_termid":{"MONDO:0013769":null},"xrefs":{"Monarch":{"xref_id":"0020290"}}}


id: GO:1990222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ProVWX complex belongs to the family of ATP-binding cassette (ABC) transporter proteins complexes. It consists of a cytoplasmic ATPase subunit ProV, a transmembrane subunit ProW and a periplasmic binding protein ProX. It is capable of translocating a wide variety of solute (e.g. glycine betaine) across the plasma membrane and is activated under osmotic stress conditions.","definition_xrefs":["GOC:bhm","PMID:23249124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ProVWX complex","synonyms":[{"name":"ATP-binding cassette (ABC) transporter complex ProVWX","type":"exact"}],"termid":"GO:1990222"}


id: GO:0120019
data:
  {"annotated_genes":["SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99339],"is_not":false,"summary":null,"term":"GO:0120019"}]},"cv_name":"molecular_function","definition":"Removes phosphatidylcholine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:krc","PMID:24220498","PMID:25797198","PMID:20823909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"phosphatidylcholine transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483219","Reactome:R-HSA-1483211","Reactome:R-HSA-1483087"],"synonyms":[{"name":"intermembrane phosphatidylcholine transfer activity","type":"narrow"},{"name":"phosphatidylcholine carrier activity","type":"exact"}],"termid":"GO:0120019","terms_by_termid":{"GO:0120019":null}}


id: MONDO:0011771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neuromuscular disease characterized by progressive muscular weakness and atrophy predominantly affecting distal parts of limbs, later involvement of proximal and trunk muscles with marked hyperlordosis and late diaphragmatic dysfunction.","definition_xrefs":["Orphanet:139547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 3","secondary_identifiers":["OMIM:607088","GARD:16956","MESH:C564626","DOID:0111211","MEDGEN:337659","UMLS:C1846823"],"synonyms":[{"name":"HMN 3","type":"related"},{"name":"HMN 4","type":"related"},{"name":"autosomal recessive distal spinal muscular atrophy type 3","type":"exact"},{"name":"dHMN3","type":"related"},{"name":"dHMN3 and dHMN4","type":"exact"},{"name":"dHMN4","type":"related"},{"name":"dSMA3","type":"exact"},{"name":"distal hereditary motor neuropathy type 3 and type 4","type":"exact"},{"name":"distal spinal muscular atrophy type 3","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type 3","type":"related"},{"name":"neuronopathy, distal hereditary motor, type 4","type":"related"},{"name":"neuropathy, distal hereditary motor, type 4","type":"related"},{"name":"spinal muscular atrophy, chronic distal, autosomal recessive","type":"exact"},{"name":"spinal muscular atrophy, distal, autosomal recessive, 3","type":"related"}],"termid":"MONDO:0011771","xrefs":{"Monarch":{"xref_id":"0011771"}}}


id: PBO:0082509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form active complex, Psy4p may provide substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; involved in activation of Gln3p to alleviate nitrogen catabolite repression; Pph3p and Psy2p localize to foci on meiotic chromosomes","termid":"PBO:0082509"}


id: PBO:0047240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 234 member B","termid":"PBO:0047240"}


id: PBO:0054619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2024","termid":"PBO:0054619"}


id: MONDO:0016027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic epilepsy syndrome characterized by the occurrence of afebrile seizures in otherwise healthy newborns with onset in the first few days of life.","definition_xrefs":["Orphanet:1949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal epilepsy syndrome","termid":"MONDO:0020070"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign neonatal seizures","secondary_identifiers":["MEDGEN:65082","UMLS:C0220669","DOID:14777","GARD:1519","OMIMPS:121200","SCTID:230410004","MedDRA:10067866","NCIT:C117307","DOID:14264","SCTID:279953009","SCTID:38281008"],"synonyms":[{"name":"BFNS","type":"exact"},{"name":"benign familal neonatal seizures","type":"exact"},{"name":"benign familial convulsion","type":"exact"},{"name":"benign familial convulsions","type":"exact"},{"name":"benign familial neonatal convulsions","type":"exact"},{"name":"benign familial neonatal epilepsy","type":"exact"},{"name":"benign familial neonatal seizures","type":"exact"},{"name":"benign neonatal convulsions","type":"exact"},{"name":"familial neonatal seizures","type":"exact"},{"name":"seizures, benign familial neonatal","type":"exact"}],"termid":"MONDO:0016027","xrefs":{"Monarch":{"xref_id":"0016027"}}}


id: PBO:0088514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb1","termid":"PBO:0088514"}


id: MONDO:0005125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of leprosy in which there are clinical manifestations of both principal types (lepromatous and tuberculoid). The disease may shift toward one of these two polar or principal forms.","definition_xrefs":["MESH:D015439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leprosy","termid":"MONDO:0005124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"borderline leprosy","secondary_identifiers":["SCTID:400154003","icd11.foundation:56771163","MEDGEN:7305","EFO:0001055","ICD9:030.3","UMLS:C0023346","DOID:1023","ICD10CM:A30.3"],"synonyms":[{"name":"Midborderline leprosy","type":"exact"},{"name":"borderline leprosy [group B]","type":"exact"},{"name":"borderline or dimorphous leprosy","type":"exact"}],"termid":"MONDO:0005125","xrefs":{"Monarch":{"xref_id":"0005125"}}}


id: PBO:0085664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nonstop mRNA decay; predicted to be palmitoylated","termid":"PBO:0085664"}


id: PBO:0066024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 3 like","termid":"PBO:0066024"}


id: MONDO:0016542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare immune dysregulation disease with immunodeficiency characterized by severe, progressive infantile onset inflammatory bowel disease with pancolitis, perianal disease (ulceration, fistulae), recurrent respiratory, genitourinary and cutaneous infections, arthritis and a high risk of B-cell lymphoma.","definition_xrefs":["Orphanet:238569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"IL10-related early-onset inflammatory bowel disease","secondary_identifiers":["NANDO:2200446","GARD:13016","UMLS:C4749850","MEDGEN:1661450"],"synonyms":[{"name":"IL10-related early-onset IBD","type":"exact"},{"name":"IL10-related early-onset inflammatory bowel disease","type":"exact"},{"name":"autosomal recessive early-onset IBD","type":"related"},{"name":"autosomal recessive early-onset inflammatory bowel disease","type":"related"},{"name":"immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections syndrome","type":"exact"}],"termid":"MONDO:0016542","xrefs":{"Monarch":{"xref_id":"0016542"}}}


id: PBO:0062305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 2","termid":"PBO:0062305"}


id: PBO:0075716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin","termid":"PBO:0075716"}


id: PBO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain ribosome biogenesis protein Rpf2","termid":"PBO:0018250"}


id: PBO:0055683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member M","termid":"PBO:0055683"}


id: PBO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 4 (pseudogene)","termid":"PBO:0060156"}


id: PBO:0055737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomodin 3","termid":"PBO:0055737"}


id: PBO:0060066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 13","termid":"PBO:0060066"}


id: MONDO:0012509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary pigmented nodular adrenocortical disease in which the cause of the disease is a mutation in the PRKAR1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented nodular adrenocortical disease, primary, 1","secondary_identifiers":["GARD:18620","MESH:C566469","MEDGEN:400627","UMLS:C1864846","DOID:0070546","OMIM:610489"],"synonyms":[{"name":"Cushing syndrome, adrenal, due to PPNAD1","type":"related"},{"name":"PPNAD1","type":"related"},{"name":"PRKAR1A primary pigmented nodular adrenocortical disease","type":"exact"},{"name":"adrenocortical nodular dysplasia, primary","type":"related"},{"name":"pigmented micronodular adrenocortical disease, primary, 1","type":"related"},{"name":"pigmented nodular adrenocortical disease, primary, 1","type":"exact"},{"name":"pigmented nodular adrenocortical disease, primary, type 1","type":"exact"},{"name":"primary pigmented nodular adrenocortical disease caused by mutation in PRKAR1A","type":"exact"}],"termid":"MONDO:0012509","xrefs":{"Monarch":{"xref_id":"0012509"}}}


id: MONDO:0018701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital nemaline myopathy (obsolete MONDO:0018701)","secondary_identifiers":["Orphanet:457074"],"termid":"MONDO:0018701","xrefs":{"Monarch":{"xref_id":"0018701"}}}


id: PBO:0027775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone","termid":"PBO:0027775"}


id: GO:0062162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of a pyocyanine biosynthetic process.","definition_xrefs":["PMID:28715477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of pyocyanine biosynthetic process","termid":"GO:0062161"},{"relation_name":"positively_regulates","term_name":"pyocyanine biosynthetic process","termid":"GO:0106220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyocyanine biosynthetic process","synonyms":[{"name":"positive regulation of pyocyanin biosynthetic process","type":"exact"}],"termid":"GO:0062162"}


id: GO:0031835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance P receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"substance P receptor binding","synonyms":[{"name":"neurokinin-1 receptor binding","type":"exact"},{"name":"substance P receptor ligand","type":"narrow"}],"termid":"GO:0031835"}


id: GO:0090581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannosylglycerate(out) = protein cysteine + mannosylglycerate phosphate(in).","definition_xrefs":["PMID:14645248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein-phosphocysteine-mannosylglycerate-phosphotransferase system transporter activity","termid":"GO:0090581"}


id: PBO:0064384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 6","termid":"PBO:0064384"}


id: MONDO:0001959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labyrinthine bilateral reactive loss","secondary_identifiers":["UMLS:C0155520","ICD9:386.56","MEDGEN:510006","DOID:14413","SCTID:194377001"],"synonyms":[{"name":"bilateral loss of labyrinthine reactivity","type":"exact"},{"name":"loss of labyrinthine reactivity, bilateral","type":"exact"}],"termid":"MONDO:0001959","xrefs":{"Monarch":{"xref_id":"0001959"}}}


id: FYECO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiabendazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiabendazole","synonyms":[{"name":"TBZ added","type":"exact"}],"termid":"FYECO:0000079"}


id: FYPO:0003859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to wortmannin. Cells stop growing (and may die) at a concentration of wortmannin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to wortmannin","synonyms":[{"name":"hypersensitive to wortmannin","type":"exact"},{"name":"sensitive to wortmannin during mitotic cell cycle","type":"related"},{"name":"sensitive to wortmannin during vegetative growth","type":"exact"}],"termid":"FYPO:0003859"}


id: MONDO:1011041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary lack of melanin pigmentation in Mexican tetra due to a variation in the OCA2 gene.","definition_xrefs":["PMID:24282555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, OCA2-related, Mexican tetra","secondary_identifiers":["OMIA:002130-7994"],"termid":"MONDO:1011041","xrefs":{"Monarch":{"xref_id":"1011041"}}}


id: MONDO:0019540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse alveolar hemorrhage","secondary_identifiers":["GARD:19110","Orphanet:90060","MEDGEN:1381751","HP:0025420","UMLS:C4476767"],"synonyms":[{"name":"diffuse alveolar haemorrhage (disease)","type":"exact"},{"name":"diffuse alveolar hemorrhage","type":"exact"},{"name":"diffuse alveolar hemorrhage (disease)","type":"exact"}],"termid":"MONDO:0019540","xrefs":{"Monarch":{"xref_id":"0019540"}}}


id: PBO:0117045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound glycerophospholipid O-acyltransferase 2","termid":"PBO:0117045"}


id: PBO:0046709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 7","termid":"PBO:0046709"}


id: PBO:0044552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein kinase 3","termid":"PBO:0044552"}


id: MONDO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to perceive any auditory information but whose hearing is intact.","definition_xrefs":["DOID:0060140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory agnosia","termid":"MONDO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical deafness","secondary_identifiers":["MEDGEN:98233","UMLS:C0392704"],"termid":"MONDO:0000670","xrefs":{"Monarch":{"xref_id":"0000670"}}}


id: FYPO:0003242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mRNA splicing via the spliceosome is decreased, where introns have low A/U content.","definition_xrefs":["PomBase:mah","PMID:23754748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with low A/U content","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with low A/U content","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with low A/U content","type":"exact"},{"name":"decreased splicing of mRNA introns with low A/U content","type":"broad"},{"name":"decreased splicing of mRNA introns with low A/U content during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with low A/U content during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with low A/U content","type":"exact"}],"termid":"FYPO:0003242"}


id: GO:0042801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the addition of a phosphate group onto a serine or threonine residue in any member of the polo kinase class of proteins.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete polo kinase kinase activity (obsolete GO:0042801)","termid":"GO:0042801"}


id: PBO:0071933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 10","termid":"PBO:0071933"}


id: PBO:0030164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_sporulation","termid":"PBO:0030164"}


id: MONDO:0014158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the ANKS6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 16","secondary_identifiers":["DOID:0111124","MEDGEN:815650","OMIM:615382","GARD:18183","SCTID:444558002","UMLS:C3809320"],"synonyms":[{"name":"ANKS6 nephronophthisis (disease)","type":"exact"},{"name":"NPHP16","type":"exact"},{"name":"autosomal recessive infantile NPHP","type":"related"},{"name":"autosomal recessive infantile nephronophthisis","type":"related"},{"name":"infantile nephronophthisis","type":"related"},{"name":"nephronophthisis (disease) caused by mutation in ANKS6","type":"exact"},{"name":"nephronophthisis 16","type":"exact"},{"name":"nephronophthisis type 16","type":"exact"}],"termid":"MONDO:0014158","xrefs":{"Monarch":{"xref_id":"0014158"}}}


id: MONDO:1010681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in northern tree shrew.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, northern tree shrew","secondary_identifiers":["OMIA:000038-37347"],"termid":"MONDO:1010681","xrefs":{"Monarch":{"xref_id":"1010681"}}}


id: MONDO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute conjunctivitis that is characterized by bleeding into the conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"},{"relation_name":"is_a","term_name":"viral conjunctivitis","termid":"MONDO:0043541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute hemorrhagic conjunctivitis","secondary_identifiers":["UMLS:C0009765","MESH:D003232","NCIT:C34505","SCTID:398264003","DOID:11227","EFO:0007131","MEDGEN:1094","ICD9:077.4"],"synonyms":[{"name":"Apollo disease","type":"exact"},{"name":"epidemic hemorrhagic conjunctivitis","type":"exact"},{"name":"viral conjunctivitis","type":"related"}],"termid":"MONDO:0005634","xrefs":{"Monarch":{"xref_id":"0005634"}}}


id: PBO:0073641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 28, pseudogene","termid":"PBO:0073641"}


id: GO:0048754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching morphogenesis of an epithelial tube","synonyms":[{"name":"tubulogenesis","type":"related"}],"termid":"GO:0048754"}


id: GO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excessive phosphorylation of a protein, as a result of activation of kinases, deactivation of phosphatases, or both.","definition_xrefs":["ISBN:039751820X","PMID:12859672","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperphosphorylation (obsolete GO:0048151)","synonyms":[{"name":"hyperphosphorylation","type":"exact"}],"termid":"GO:0048151"}


id: SO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide resides of type VIa or type VIb and where the i+2 residue is cis-proline.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six","synonyms":[{"name":"beta turn type six","type":"exact"},{"name":"cis-proline loop","type":"exact"},{"name":"type VI beta turn","type":"exact"},{"name":"type VI turn","type":"exact"}],"termid":"SO:0001150"}


id: MONDO:0044765
data:
  {"annotated_genes":["SJAG_00093","SJAG_04148","SJAG_03361","SJAG_01185","SJAG_04621","SJAG_00933","SJAG_03182","SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[86830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[87638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[87562,87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[87560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[87566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"Nephrotic syndrome, occurring in the pediatric population, in which proteinuria does not normalize with administration of steroids; this condition is unresponsive to a minimum of four weeks administration of oral corticosteroids.","definition_xrefs":["NCIT:C122798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome","termid":"MONDO:0005377"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_04000":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"steroid-resistant nephrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:588369","GTR:AN0255485","SCTID:236381000","UMLS:C0403397","GTR:AN0200342","GTR:AN0096391","GTR:AN0096395"],"synonyms":[{"name":"NPHS2","type":"related"},{"name":"SRNS - steroid-resistant nephrotic syndrome","type":"related"},{"name":"nephrotic syndrome of childhood - steroid resistant","type":"exact"},{"name":"nephrotic syndrome, idiopathic, steroid-resistant","type":"narrow"},{"name":"nephrotic syndrome, steroid-resistant, autosomal recessive","type":"narrow"},{"name":"nephrotic syndrome-steroid-resistant","type":"exact"},{"name":"steroid-resistant nephrotic syndrome","type":"exact"},{"name":"steroid-unresponsive nephrotic syndrome","type":"related"}],"termid":"MONDO:0044765","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null},"xrefs":{"Monarch":{"xref_id":"0044765"}}}


id: GO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that activates or increases the rate of transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription by galactose","synonyms":[{"name":"activation of transcription by galactose","type":"narrow"},{"name":"stimulation of transcription by galactose","type":"narrow"},{"name":"up regulation of transcription by galactose","type":"exact"},{"name":"up-regulation of transcription by galactose","type":"exact"},{"name":"upregulation of transcription by galactose","type":"exact"}],"termid":"GO:0000411"}


id: MONDO:0859526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 109 with lymphoproliferation","secondary_identifiers":["OMIM:620282","MEDGEN:1840982","UMLS:C5830346"],"termid":"MONDO:0859526","xrefs":{"Monarch":{"xref_id":"0859526"}}}


id: PBO:0017676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion transmembrane transporter Trk1","termid":"PBO:0017676"}


id: MONDO:0006665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrophic gastritis that is persistent and long-standing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic gastritis","termid":"MONDO:0005001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic atrophic gastritis","secondary_identifiers":["EFO:1000826","UMLS:C0017154","ICD10CM:K29.4","MEDGEN:42157","DOID:8929","ICD9:535.10","SCTID:84568007","MedDRA:10003685","ICD9:535.1","ICD9:535.11","MESH:D005757","NCIT:C7405"],"synonyms":[{"name":"Gastritides, atrophic","type":"exact"},{"name":"atrophic Gastritides","type":"exact"},{"name":"atrophic gastritis","type":"exact"},{"name":"gastric atrophy","type":"exact"}],"termid":"MONDO:0006665","xrefs":{"Monarch":{"xref_id":"0006665"}}}


id: PBO:0078611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64B","termid":"PBO:0078611"}


id: PBO:0061345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 3","termid":"PBO:0061345"}


id: PBO:0088422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25","termid":"PBO:0088422"}


id: PBO:0083989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent disulfide oxidoreductase; hydroperoxide and superoxide-radical responsive, heat-stable, with active site cysteine pair; protects cells from oxidative damage; GRX1 has a paralog, GRX2, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0083989"}


id: PBO:0068087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 393","termid":"PBO:0068087"}


id: GO:0006372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete lariat formation, 5'-splice site cleavage (obsolete GO:0006372)","synonyms":[{"name":"lariat formation, 5'-splice site cleavage","type":"exact"}],"termid":"GO:0006372"}


id: PBO:0116641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF interacting protein 2","termid":"PBO:0116641"}


id: PBO:0071343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 1","termid":"PBO:0071343"}


id: GO:0102795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-naphthaldehyde + O2 + H2O = H+ + 1-naphthoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-naphthaldehyde:oxygen oxidoreductase activity (obsolete GO:0102795)","termid":"GO:0102795"}


id: PBO:0090564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein, serine/threonine repeat","termid":"PBO:0090564"}


id: MONDO:0015843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine hypoplasia","secondary_identifiers":["GARD:20184","MedDRA:10063146","MEDGEN:120575","Orphanet:180139","icd11.foundation:1858530341","UMLS:C0266399"],"termid":"MONDO:0015843","xrefs":{"Monarch":{"xref_id":"0015843"}}}


id: PBO:0027163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_kinetochore_during_meiosis","termid":"PBO:0027163"}


id: PBO:0076268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWT1 RNA endoribonuclease homolog","termid":"PBO:0076268"}


id: MONDO:0007003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete twin-to-twin transfusion syndrome (obsolete MONDO:0007003)","termid":"MONDO:0007003","xrefs":{"Monarch":{"xref_id":"0007003"}}}


id: GO:0007087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which nuclear pore complexes reform during mitotic cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore complex assembly","termid":"GO:0051292"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear pore complex reassembly","termid":"GO:0007087"}


id: GO:0035108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a limb are generated and organized. A limb is a paired appendage of a tetrapod used for locomotion or grasping.","definition_xrefs":["UBERON:0002101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb morphogenesis","synonyms":[{"name":"limb bud morphogenesis","type":"narrow"}],"termid":"GO:0035108"}


id: PBO:0069956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1249, pseudogene","termid":"PBO:0069956"}


id: MONDO:1012003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal sequestra, non-human animal","secondary_identifiers":["OMIA:002574"],"termid":"MONDO:1012003","xrefs":{"Monarch":{"xref_id":"1012003"}}}


id: PBO:0034560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_mitotic_S_phase","termid":"PBO:0034560"}


id: GO:0048040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + UDP-alpha-D-glucuronate = CO2 + UDP-alpha-D-xylose.","definition_xrefs":["EC:4.1.1.35","RHEA:23916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"UDP-glucuronate decarboxylase activity","secondary_identifiers":["MetaCyc:UDP-GLUCURONATE-DECARBOXYLASE-RXN","Reactome:R-HSA-8863761","KEGG_REACTION:R01384"],"synonyms":[{"name":"UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming)","type":"related"},{"name":"UDP-D-glucuronate carboxy-lyase activity","type":"related"},{"name":"UDP-glucuronic acid decarboxylase activity","type":"exact"},{"name":"UDPglucuronate decarboxylase activity","type":"related"},{"name":"uridine-diphosphoglucuronate decarboxylase activity","type":"related"}],"termid":"GO:0048040"}


id: GO:0019018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of two sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete bipartite viral genome (obsolete GO:0019018)","termid":"GO:0019018"}


id: GO:0047163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dichloroaniline + malonyl-CoA = N-(3,4-dichlorophenyl)malonamate + CoA.","definition_xrefs":["EC:2.3.1.114","RHEA:21060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"3,4-dichloroaniline N-malonyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04050","MetaCyc:2.3.1.114-RXN"],"synonyms":[{"name":"malonyl-CoA:3,4-dichloroaniline N-malonyltransferase activity","type":"related"}],"termid":"GO:0047163"}


id: MOD:01392
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue, and C-4 methylates to form L-asparagine 5-methylthiazole-4-carboxylic acid.","definition_xrefs":["PubMed:10625477","PubMed:1880060","PubMed:7844053","RESID:AA0469"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"C-methylated residue","termid":"MOD:00656"},{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-bisazanyl-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-5-methyl-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methylthiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine 5-methylthiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01392"}


id: PBO:0062822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSER1 divergent transcript","termid":"PBO:0062822"}


id: PBO:0059246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L15 pseudogene 1","termid":"PBO:0059246"}


id: GO:0034462
data:
  {"annotated_genes":["SJAG_01169","SJAG_04524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74595,114907],"is_not":false,"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a small-subunit processome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic small ribosomal subunit assembly","termid":"GO:0180025"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"small-subunit processome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SSU processome assembly","type":"exact"},{"name":"small subunit processome assembly","type":"exact"}],"termid":"GO:0034462","terms_by_termid":{"GO:0034462":null}}


id: GO:1900585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arugosin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"arugosin metabolic process","synonyms":[{"name":"arugosin metabolism","type":"exact"}],"termid":"GO:1900585"}


id: GO:0008398
data:
  {"annotated_genes":["SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90246],"is_not":false,"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 14alpha-methyl steroid + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = a delta14 steroid + formate + 4 H+ + 4 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:54028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sterol 14-demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.14.13.70-RXN","EC:1.14.14.154"],"synonyms":[{"name":"cytochrome P450 51 activity","type":"narrow"},{"name":"cytochrome P450 CYP51","type":"narrow"},{"name":"lanosterol 14-alpha-demethylase activity","type":"narrow"},{"name":"lanosterol 14-demethylase activity","type":"narrow"},{"name":"lanosterol 14alpha-demethylase activity","type":"related"},{"name":"obtusufoliol 14-demethylase activity","type":"narrow"},{"name":"sterol 14-alpha-demethylase activity","type":"related"},{"name":"sterol 14alpha-demethylase activity","type":"related"}],"termid":"GO:0008398","terms_by_termid":{"GO:0008398":null}}


id: MONDO:0021358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the hypopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of hypopharynx","secondary_identifiers":["MEDGEN:43797","UMLS:C0020627","SCTID:126686005","NCIT:C3127"],"synonyms":[{"name":"hypopharyngeal neoplasm","type":"exact"},{"name":"hypopharyngeal neoplasms","type":"exact"},{"name":"hypopharyngeal tumor","type":"exact"},{"name":"hypopharyngeal tumour","type":"exact"},{"name":"hypopharynx neoplasm","type":"exact"},{"name":"hypopharynx neoplasm (disease)","type":"exact"},{"name":"hypopharynx tumor","type":"exact"},{"name":"hypopharynx tumour","type":"exact"},{"name":"neoplasm of hypopharynx","type":"exact"},{"name":"neoplasm of the hypopharynx","type":"exact"},{"name":"tumor of hypopharynx","type":"exact"},{"name":"tumor of the hypopharynx","type":"exact"},{"name":"tumour of hypopharynx","type":"exact"},{"name":"tumour of the hypopharynx","type":"exact"}],"termid":"MONDO:0021358","xrefs":{"Monarch":{"xref_id":"0021358"}}}


id: GO:0034658
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90183],"is_not":false,"summary":null,"term":"GO:0034658"}]},"cv_name":"molecular_function","definition":"Enables the transfer of isopropylmalate from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"isopropylmalate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034658","terms_by_termid":{"GO:0034658":null}}


id: GO:0008841
data:
  {"annotated_genes":["SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81039],"is_not":false,"summary":null,"term":"GO:0008841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dihydropterate + L-glutamate = ADP + phosphate + dihydrofolate.","definition_xrefs":["EC:6.3.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"dihydrofolate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DIHYDROFOLATESYNTH-RXN","RHEA:23584"],"synonyms":[{"name":"7,8-dihydrofolate synthetase activity","type":"related"},{"name":"7,8-dihydropteroate:L-glutamate ligase (ADP) activity","type":"related"},{"name":"7,8-dihydropteroate:L-glutamate ligase (ADP-forming)","type":"related"},{"name":"DHFS activity","type":"related"},{"name":"FHFS activity","type":"related"},{"name":"FHFS/FPGS activity","type":"related"},{"name":"H(2)-folate synthetase activity","type":"related"},{"name":"H2-folate synthetase activity","type":"related"},{"name":"dihydrofolate synthetase activity","type":"related"},{"name":"dihydrofolate synthetase-folylpolyglutamate synthetase activity","type":"related"},{"name":"dihydropteroate:L-glutamate ligase (ADP-forming) activity","type":"related"},{"name":"folylpoly-(gamma-glutamate) synthetase-dihydrofolate synthase activity","type":"related"}],"termid":"GO:0008841","terms_by_termid":{"GO:0008841":null}}


id: MONDO:0016068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrochondrogenesis is a rare, neonatally lethal, rhizomelic chondrodysplasia. Eleven cases have been reported. The face is distinctive and characterized by protuberant eyes, flat midface, flat small nose with anteverted nares and a small mouth with long upper lip. Cleft palate, micrognathia and bifid tongue can occur. The limbs show marked shortness of all segments with relatively normal hands and feet. No internal anomalies other than omphalocele have been reported. Transmission is probably autosomal recessive. Recurrence in a consanguineous family (affecting both sexes) and concordance of affected male twins have been reported.","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibrochondrogenesis","secondary_identifiers":["MEDGEN:82700","OMIMPS:228520","MESH:C562524","GARD:2321","NANDO:2201016","icd11.foundation:1412541453","DOID:0060465","UMLS:C0265282","Orphanet:2021","SCTID:17144009"],"termid":"MONDO:0016068","xrefs":{"Monarch":{"xref_id":"0016068"}}}


id: MONDO:0009919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peroxisomal acyl-CoA oxidase deficiency is a rare neurodegenerative disorder that belongs to the group of inherited peroxisomal disorders and is characterized by hypotonia and seizures in the neonatal period and neurological regression in early infancy.","definition_xrefs":["Orphanet:2971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"peroxisomal acyl-CoA oxidase deficiency","secondary_identifiers":["SCTID:238069004","NANDO:1200765","OMIM:264470","DOID:0050797","icd11.foundation:927825451","ICD9:255.41","MESH:C536662","UMLS:C1849678","GARD:4543","MEDGEN:376636","NCIT:C170437"],"synonyms":[{"name":"ACOX1 deficiency","type":"exact"},{"name":"Pseudoadrenoleukodystrophy","type":"exact"},{"name":"Pseudoneonatal adrenoleukodystrophy","type":"related"},{"name":"peroxisomal acyl-CoA oxidase deficiency","type":"exact"},{"name":"peroxisomal acyl-coenzyme A oxidase","type":"exact"},{"name":"pseudo-NALD","type":"exact"},{"name":"pseudo-neonatal adrenoleukodystrophy","type":"exact"},{"name":"straight-chain acyl-Coa oxidase deficiency","type":"related"}],"termid":"MONDO:0009919","xrefs":{"Monarch":{"xref_id":"0009919"}}}


id: PBO:0051103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-14 (pseudogene)","termid":"PBO:0051103"}


id: MONDO:1010411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, dog","secondary_identifiers":["OMIA:000344-9615"],"termid":"MONDO:1010411","xrefs":{"Monarch":{"xref_id":"1010411"}}}


id: PBO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_formation","termid":"PBO:0031236"}


id: PBO:0051807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain 3 pseudogene 1","termid":"PBO:0051807"}


id: GO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vasoconstriction that is triggered by vasomotor excitation resulting from the detection of high carbon dioxide levels in the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure","termid":"GO:0002014"}


id: GO:0071762
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgNAR isotype held together by disulfide bonds and lacking immunoglobulin light chains.","definition_xrefs":["GOC:add","PMID:12543123","PMID:16051357","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"heavy chain immunoglobulin complex","synonyms":[{"name":"HCab","type":"narrow"},{"name":"Ig NAR immunoglobulin complex","type":"narrow"},{"name":"IgNAR antibody","type":"narrow"},{"name":"IgNAR immunoglobulin complex","type":"narrow"}],"termid":"GO:0071762"}


id: PBO:0058188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4481","termid":"PBO:0058188"}


id: PBO:0050937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 7","termid":"PBO:0050937"}


id: GO:0000220
data:
  {"annotated_genes":["SJAG_00516","SJAG_01913","SJAG_02782","SJAG_02023","SJAG_03962","SJAG_03406","SJAG_05294"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62649,91930,93826,97430,97611,101732,105703],"is_not":false,"summary":null,"term":"GO:0000220"}]},"cv_name":"cellular_component","definition":"The V0 domain of a proton-transporting V-type ATPase found in the vacuolar membrane.","definition_xrefs":["GOC:mah","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V0 domain","termid":"GO:0033179"},{"relation_name":"part_of","term_name":"vacuolar proton-transporting V-type ATPase complex","termid":"GO:0016471"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase, V0 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar hydrogen ion-transporting ATPase V0 domain","type":"exact"}],"termid":"GO:0000220","terms_by_termid":{"GO:0000220":null}}


id: PBO:0044221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 2","termid":"PBO:0044221"}


id: PR:O13732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 2-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15A10.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.12c","secondary_identifiers":["UniProtKB:O13732"],"synonyms":[{"name":"Spom972h-TRAPPC2L","type":"exact"}],"termid":"PR:O13732"}


id: PBO:0062938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 3","termid":"PBO:0062938"}


id: FYPO:0000063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA recombination is abnormal. DNA recombination is a process that results in reassortment of genes, producing gene combinations different from those that were present in the parents.","definition_xrefs":["PomBase:mah","GO:0006310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal DNA recombination","synonyms":[{"name":"abnormal recombination","type":"exact"},{"name":"recombination defects","type":"exact"}],"termid":"FYPO:0000063"}


id: GO:0046322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fatty acid oxidation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"regulation of fatty acid oxidation","termid":"GO:0046320"},{"relation_name":"negatively_regulates","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of fatty acid oxidation","synonyms":[{"name":"down regulation of fatty acid oxidation","type":"exact"},{"name":"down-regulation of fatty acid oxidation","type":"exact"},{"name":"downregulation of fatty acid oxidation","type":"exact"},{"name":"inhibition of fatty acid oxidation","type":"narrow"}],"termid":"GO:0046322"}


id: PBO:0051733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 4 pseudogene 2","termid":"PBO:0051733"}


id: PBO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide B","termid":"PBO:0061295"}


id: GO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the embryonic placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"}


id: MONDO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroectodermal tumor that involves the central nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system primitive neuroectodermal neoplasm","secondary_identifiers":["MEDGEN:854517","DOID:0060103","NANDO:2200099","UMLS:C3887678","NANDO:2200100","NCIT:C5398"],"synonyms":[{"name":"CNS PNET","type":"exact"},{"name":"CNS primitive neuroectodermal neoplasm","type":"exact"},{"name":"CNS primitive neuroectodermal tumor","type":"exact"},{"name":"CNS primitive neuroectodermal tumour","type":"exact"},{"name":"central nervous system PNET","type":"exact"},{"name":"central nervous system neuroectodermal tumor","type":"exact"},{"name":"central nervous system neuroectodermal tumour","type":"exact"},{"name":"central nervous system primitive neuroectodermal neoplasm","type":"exact"},{"name":"central nervous system primitive neuroectodermal tumor","type":"exact"},{"name":"central nervous system primitive neuroectodermal tumor (WHO grade IV)","type":"exact"},{"name":"central nervous system primitive neuroectodermal tumour","type":"exact"},{"name":"central nervous system primitive neuroectodermal tumour (WHO grade IV)","type":"exact"},{"name":"central primitive neuroectodermal neoplasm","type":"exact"},{"name":"central primitive neuroectodermal tumor","type":"exact"},{"name":"central primitive neuroectodermal tumour","type":"exact"},{"name":"primitive neuroectodermal tumor of central nervous system","type":"exact"},{"name":"primitive neuroectodermal tumour of central nervous system","type":"exact"}],"termid":"MONDO:0000640","xrefs":{"Monarch":{"xref_id":"0000640"}}}


id: PR:O74562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14146:SF0","PRO:DNx","OMA:SCHPO04337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.09","secondary_identifiers":["UniProtKB:O74562"],"synonyms":[{"name":"Spom972h-EXOC4","type":"exact"}],"termid":"PR:O74562"}


id: FYPO:0001213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is higher than normal. Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PMID:9813085","CHEBI:64048","CHEBI:64052","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased Man8GlcNAc level","synonyms":[{"name":"increased Man8GlcNAc accumulation","type":"related"},{"name":"increased Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"increased Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"increased Man8GlcNAc2 level","type":"exact"},{"name":"increased cellular Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001213"}


id: GO:0015096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete manganese resistance permease activity (obsolete GO:0015096)","synonyms":[{"name":"manganese resistance permease activity","type":"exact"}],"termid":"GO:0015096"}


id: MONDO:0016726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuronal tumor (obsolete MONDO:0016726)","secondary_identifiers":["Orphanet:251924"],"termid":"MONDO:0016726","xrefs":{"Monarch":{"xref_id":"0016726"}}}


id: FYPO:0005195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation during mitotic S phase","synonyms":[{"name":"normal protein breakdown during mitotic S phase","type":"exact"},{"name":"normal protein catabolic process during mitotic S phase","type":"exact"},{"name":"normal protein catabolism during mitotic S phase","type":"exact"},{"name":"normal protein degradation during S phase during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005195"}


id: PBO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 3","termid":"PBO:0046469"}


id: MONDO:0013403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any visceral heterotaxy in which the cause of the disease is a mutation in the ACVR2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 4, autosomal","secondary_identifiers":["UMLS:C3151057","MEDGEN:462407","OMIM:613751"],"synonyms":[{"name":"ACVR2B visceral heterotaxy","type":"exact"},{"name":"HTX4","type":"related"},{"name":"heterotaxy, visceral, 4, autosomal","type":"exact"},{"name":"visceral heterotaxy caused by mutation in ACVR2B","type":"exact"}],"termid":"MONDO:0013403","xrefs":{"Monarch":{"xref_id":"0013403"}}}


id: PBO:0048369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 binding adaptor protein, transmembrane","termid":"PBO:0048369"}


id: MONDO:1010767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, horse","secondary_identifiers":["OMIA:001055-9796"],"termid":"MONDO:1010767","xrefs":{"Monarch":{"xref_id":"1010767"}}}


id: PBO:0085747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; component of the EKC/KEOPS complex with Kae1p, Cgi121p, Pcc1p, and Gon7p; Pyrococcus Bud32 ortholog functions as a P-loop ATPase rather than a protein kinase in the context of the complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; mutation is functionally complemented by human TP53RK","termid":"PBO:0085747"}


id: PBO:0082800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic; role in cell wall beta-glucan biosynthesis and the stress response","termid":"PBO:0082800"}


id: MONDO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"combined deficiency of factor VII and factor X","secondary_identifiers":["GARD:22418","MEDGEN:1843297","Orphanet:600691","UMLS:C5681529"],"termid":"MONDO:0035776","xrefs":{"Monarch":{"xref_id":"0035776"}}}


id: PBO:0062664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily F member 1","termid":"PBO:0062664"}


id: PR:Q9P381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13A2.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.03","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-DG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTP:phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC13A2.03","type":"exact"}],"termid":"PR:Q9P381"}


id: PBO:0054930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2344","termid":"PBO:0054930"}


id: PBO:0049959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 5","termid":"PBO:0049959"}


id: PR:O59824
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent zinc metalloprotease FtsH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent zinc metalloprotease YME1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.04c","secondary_identifiers":["UniProtKB:O59824"],"synonyms":[{"name":"Spom972h-ftsH","type":"exact"}],"termid":"PR:O59824"}


id: PBO:0047600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHIP1A divergent transcript","termid":"PBO:0047600"}


id: PBO:0068667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 48, pseudogene","termid":"PBO:0068667"}


id: PBO:0057767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2113","termid":"PBO:0057767"}


id: PBO:0079088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-1","termid":"PBO:0079088"}


id: GO:0019297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme B (7-mercaptoheptanoylthreonine phosphate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"coenzyme B metabolic process","synonyms":[{"name":"coenzyme B metabolism","type":"exact"}],"termid":"GO:0019297"}


id: GO:0005818
data:
  {"annotated_genes":["SJAG_02286","SJAG_00655","SJAG_02695","SJAG_04003","SJAG_02509","SJAG_04387","SJAG_02045","SJAG_01297","SJAG_01370","SJAG_02336","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100987,113957,105804,109021,109234],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000235"},{"annotations":[92756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032117"},{"annotations":[89519],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990574"},{"annotations":[93149,63003,80530],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061673"},{"annotations":[98753],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"}]},"cv_name":"cellular_component","definition":"An array of microtubules emanating from a spindle pole MTOC that do not connect to kinetochores.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"aster","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0005818","terms_by_termid":{"GO:0000235":null,"GO:0032117":null,"GO:0061673":null,"GO:1905721":null,"GO:1990574":null}}


id: GO:0034692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises three core spliceosomal proteins, designated E, F, and G. Formation of the E.F.G complex is essential but not sufficient for the formation of a stable U1 snRNP complex.","definition_xrefs":["PMID:8641291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"E.F.G complex","termid":"GO:0034692"}


id: GO:0034856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4E)-2-hydroxyhexa-2,4-dienoate + H2O = 4-hydroxy-2-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r1281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyhexa-2,4-dienoate hydratase activity","secondary_identifiers":["RHEA:32535","EC:4.2.1.132"],"termid":"GO:0034856"}


id: FYPO:0008202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister chromatid separation occurs in meiosis I due to erroneous merotelic kinetochore attachment.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"equational sister chromatid separation at meiosis I","termid":"FYPO:0008202"}


id: FYPO:0006989
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121285,121286],"is_not":false,"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[121278],"is_not":false,"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type) at transposable elements.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"normal histone H3-K9 dimethylation at transposable element during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at transposon during vegetative growth","type":"exact"},{"name":"normal histone H3K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at transposable element during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006989","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: GO:2000313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000313"}


id: PBO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.51","termid":"PBO:0002553"}


id: GO:1905257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of RNA binding transcription factor activity.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","PMID:25116364","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of RNA binding transcription factor activity (obsolete GO:1905257)","synonyms":[{"name":"activation of RNA binding transcription factor activity","type":"narrow"},{"name":"up regulation of RNA binding transcription factor activity","type":"exact"},{"name":"up-regulation of RNA binding transcription factor activity","type":"exact"},{"name":"upregulation of RNA binding transcription factor activity","type":"exact"}],"termid":"GO:1905257"}


id: PBO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SLC5A family","termid":"PBO:0011471"}


id: PBO:0042156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 17","termid":"PBO:0042156"}


id: PBO:0066077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 5","termid":"PBO:0066077"}


id: GO:0032581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of peroxisome organization in which assembly or arrangement of constituent parts takes place in the endoplasmic reticulum.","definition_xrefs":["PMID:17646399","PMID:16717127","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0007031","GO:0008150"],"is_obsolete":false,"name":"ER-dependent peroxisome organization","synonyms":[{"name":"ER-dependent peroxisome biogenesis","type":"related"},{"name":"ER-dependent peroxisome organisation","type":"exact"},{"name":"endoplasmic reticulum-dependent peroxisome organization","type":"exact"}],"termid":"GO:0032581"}


id: FYPO:0003323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which succinate dehydrogenase (ubiquinone) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal succinate dehydrogenase (ubiquinone) activity","termid":"FYPO:0003322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished succinate dehydrogenase (ubiquinone) activity","synonyms":[{"name":"succinate dehydrogenase (ubiquinone) activity abolished","type":"exact"}],"termid":"FYPO:0003323"}


id: PBO:0087560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of signal peptidase complex; complex catalyzes cleavage of N-terminal signal sequences of proteins targeted to the secretory pathway; inhibits SRP-independent translocation into the ER with STE24; homologous to mammalian SPC25; other members of the complex are Spc1p, Spc1p, and Sec11p","termid":"PBO:0087560"}


id: MONDO:1011403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000494"],"termid":"MONDO:1011403","xrefs":{"Monarch":{"xref_id":"1011403"}}}


id: PBO:0075002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-13","termid":"PBO:0075002"}


id: GO:2000552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of type 2 immune response","termid":"GO:0002829"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell cytokine production","termid":"GO:2000551"},{"relation_name":"negatively_regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"negative regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000552"}


id: PBO:0076187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 2","termid":"PBO:0076187"}


id: PBO:0114420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIF family member 3","termid":"PBO:0114420"}


id: PBO:0082554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane","termid":"PBO:0082554"}


id: GO:0140605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A motor activity driven by an electrochemical proton gradient (proton-motive force). PMF-driven motors are used by bacterial flagella.","definition_xrefs":["PMID:18216858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003774","GO:0003674"],"is_obsolete":false,"name":"proton motive force-driven motor activity","termid":"GO:0140605"}


id: MONDO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific term used to denote any cutaneous lesion or group of lesions, or eruptions of any type on the leg. (From Stedman, 25th ed)","definition_xrefs":["MESH:D007868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"leg dermatosis","secondary_identifiers":["MEDGEN:9700","DOID:3142","UMLS:C0023219"],"termid":"MONDO:0006569","xrefs":{"Monarch":{"xref_id":"0006569"}}}


id: GO:0008423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of bleomycin B2 (a cytotoxic glycometallopeptide) by hydrolysis of a peptide bond of beta-aminoalanine, but also shows general aminopeptidase activity. The specificity varies somewhat with source, but amino acid arylamides of Met, Leu and Ala are preferred.","definition_xrefs":["EC:3.4.22.40"],"gene_count":0,"genotype_count":0,"name":"obsolete bleomycin hydrolase activity (obsolete GO:0008423)","synonyms":[{"name":"aminopeptidase C (Lactococcus lactis)","type":"narrow"},{"name":"bleomycin hydrolase activity","type":"exact"}],"termid":"GO:0008423"}


id: PBO:0083283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified gene AVT3","termid":"PBO:0083283"}


id: PBO:0065577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone 2","termid":"PBO:0065577"}


id: GO:0030395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lactose, a disaccharide of glucose and galactose, the carbohydrate of milk.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lactose binding","termid":"GO:0030395"}


id: PBO:0053773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1018","termid":"PBO:0053773"}


id: GO:1990659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining manganese ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:bhm","PMID:25417112"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of manganese ion (obsolete GO:1990659)","synonyms":[{"name":"manganese ion retention","type":"exact"},{"name":"manganese ion sequestering","type":"exact"},{"name":"manganese ion sequestration","type":"exact"},{"name":"manganese ion storage","type":"exact"},{"name":"retention of manganese ion","type":"exact"},{"name":"sequestration of manganese ion","type":"exact"},{"name":"storage of manganese ion","type":"exact"}],"termid":"GO:1990659"}


id: PR:Q9C0W3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP22H7.04 gene.","definition_xrefs":["UniProtKB:Q9C0W3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein P22H7.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.04","synonyms":[{"name":"Spom972h-SPBP22H7.04","type":"exact"}],"termid":"PR:Q9C0W3"}


id: SO:0100012
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Irregular, unstructured regions of a protein's backbone, as distinct from the regular region (namely alpha helix and beta strand - characterised by specific patterns of main-chain hydrogen bonds).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"peptide_coil","synonyms":[{"name":"coil","type":"related"},{"name":"peptide coil","type":"exact"},{"name":"random coil","type":"related"}],"termid":"SO:0100012"}


id: GO:1904709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["PMID:19208546","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of granulosa cell apoptotic process","termid":"GO:1904708"},{"relation_name":"negatively_regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulosa cell apoptotic process","synonyms":[{"name":"down regulation of granulosa cell apoptosis","type":"narrow"},{"name":"down regulation of granulosa cell apoptotic process","type":"exact"},{"name":"down regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"down regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"down-regulation of granulosa cell apoptosis","type":"narrow"},{"name":"down-regulation of granulosa cell apoptotic process","type":"exact"},{"name":"down-regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"down-regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"downregulation of granulosa cell apoptosis","type":"narrow"},{"name":"downregulation of granulosa cell apoptotic process","type":"exact"},{"name":"downregulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"downregulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"inhibition of granulosa cell apoptosis","type":"narrow"},{"name":"inhibition of granulosa cell apoptotic process","type":"narrow"},{"name":"inhibition of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"inhibition of granulosa cell of ovary apoptotic process","type":"narrow"},{"name":"negative regulation of granulosa cell apoptosis","type":"narrow"},{"name":"negative regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"negative regulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904709"}


id: PBO:0018180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin involved in ubiquitin-dependent endocytosis","termid":"PBO:0018180"}


id: MONDO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hemoglobinopathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired hemoglobinopathy","secondary_identifiers":["SCTID:127039000","MEDGEN:688237","UMLS:C1263995"],"synonyms":[{"name":"acquired hemoglobinopathy","type":"exact"}],"termid":"MONDO:0044349","xrefs":{"Monarch":{"xref_id":"0044349"}}}


id: PBO:0054672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2078","termid":"PBO:0054672"}


id: PBO:0039919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho/Rac guanine nucleotide exchange factor 18","termid":"PBO:0039919"}


id: GO:0102450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferide + S-adenosyl-L-methionine = 7,4'-O-dimethylkaempferol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"kaempferide 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13936"],"termid":"GO:0102450"}


id: GO:1990323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXIV) chains; type XXIV collagen triple helices may participate in regulating type I collagen fibrillogenesis at specific anatomical locations during fetal development.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XXIV trimer","termid":"GO:1990323"}


id: MONDO:1012919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any XY sex reversal that occurs in Chinook salmon due to a mutation in the sdY gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY sex reversal, sdY-related, Chinook salmon","secondary_identifiers":["OMIA:002531-74940"],"termid":"MONDO:1012919","xrefs":{"Monarch":{"xref_id":"1012919"}}}


id: GO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-mitochondrial processing peptidase (obsolete GO:0004241)","synonyms":[{"name":"alpha-MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"exact"}],"termid":"GO:0004241"}


id: MONDO:0020207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare isolated myopia is a rare, genetic, refraction anomaly disorder characterized by non-syndromic severe myopia, which may be associated with cataract and vitreoretinal degeneration (retinal detachment) that may lead to blindness.","definition_xrefs":["Orphanet:98619"],"gene_count":0,"genotype_count":0,"name":"obsolete rare isolated myopia (obsolete MONDO:0020207)","termid":"MONDO:0020207","xrefs":{"Monarch":{"xref_id":"0020207"}}}


id: PBO:0027898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_siRNA_level","termid":"PBO:0027898"}


id: PBO:0027560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0027560"}


id: MONDO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leukodystrophy, hypomyelinating (obsolete MONDO:0000052)","termid":"MONDO:0000052","xrefs":{"Monarch":{"xref_id":"0000052"}}}


id: FYPO:0007369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell's redox status differs from normal, as measured by the ratios of reduced to oxidized forms of one or more metabolites (e.g. NAD+:NADH).","definition_xrefs":["PMID:32319721","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular redox status","termid":"FYPO:0007369"}


id: PBO:0066347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 domain containing 1","termid":"PBO:0066347"}


id: PBO:0087883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087883"}


id: GO:0047799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclopentanone + H+ + NADPH + O2 = 5-valerolactone + H2O + NADP+.","definition_xrefs":["RHEA:15737","EC:1.14.13.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cyclopentanone monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02554","MetaCyc:CYCLOPENTANONE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"cyclopentanone 1,2-monooxygenase activity","type":"related"},{"name":"cyclopentanone oxygenase activity","type":"related"},{"name":"cyclopentanone,NADPH:oxygen oxidoreductase (5-hydroxylating, lactonizing)","type":"related"}],"termid":"GO:0047799"}


id: PBO:0081912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 879","termid":"PBO:0081912"}


id: PBO:0072487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 16","termid":"PBO:0072487"}


id: PATO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light brown","termid":"PATO:0001246"}


id: MONDO:0009924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypocalcemic vitamin D-dependent rickets (VDDR-I) is an early-onset hereditary vitamin D metabolism disorder characterized by severe hypocalcemia leading to osteomalacia and rachitic bone deformations, and moderate hypophosphatemia.","definition_xrefs":["Orphanet:289157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcemic rickets","termid":"MONDO:0017323"},{"relation_name":"is_a","term_name":"vitamin D-dependent rickets","termid":"MONDO:0024299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 1","secondary_identifiers":["MEDGEN:124344","GARD:17319","MESH:C562688","SCTID:67049004","NANDO:1200782","NCIT:C131073","UMLS:C0268689","icd11.foundation:1270705227"],"synonyms":[{"name":"1 Alpha-hydroxylase deficiency","type":"exact"},{"name":"1-alpha-hydroxylase deficiency","type":"exact"},{"name":"PDDRI","type":"exact"},{"name":"VDDI","type":"exact"},{"name":"VDDR-I","type":"exact"},{"name":"VDDR1","type":"exact"},{"name":"hypocalcemic vitamin D-dependent rickets","type":"exact"},{"name":"pseudo vitamin-D deficient rickets","type":"exact"},{"name":"pseudovitamin D-deficient rickets","type":"exact"},{"name":"selective 1-alpha, 25-hydroxyvitamin D3 deficiency","type":"exact"},{"name":"vitamin D 1 Alpha-Hydroxylase deficiency","type":"exact"},{"name":"vitamin D dependency, type 1","type":"related"},{"name":"vitamin D dependent rickets type I","type":"exact"},{"name":"vitamin D-dependency type I","type":"exact"},{"name":"vitamin D-dependent rickets type 1","type":"exact"}],"termid":"MONDO:0009924","xrefs":{"Monarch":{"xref_id":"0009924"}}}


id: PBO:0039042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 4","termid":"PBO:0039042"}


id: PBO:0064292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen receptor with a C-terminal lysine","termid":"PBO:0064292"}


id: PBO:0056630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 10","termid":"PBO:0056630"}


id: GO:0060443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland are generated and organized. Morphogenesis refers to the creation of shape. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland morphogenesis","termid":"GO:0060443"}


id: PBO:0029319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat","termid":"PBO:0029319"}


id: PATO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000104 osmotic response sensitivity (obsolete PATO:0000104)","termid":"PATO:0000104"}


id: GO:0000445
data:
  {"annotated_genes":["SJAG_04310","SJAG_04115","SJAG_00992","SJAG_05328","SJAG_04202","SJAG_04536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65276,77760,78501,103658,112952,120793],"is_not":false,"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The THO complex when it is part of the TREX (TRanscription EXport) complex that is involved in coupling transcription to export of mRNAs to the cytoplasm. In S. cerevisiae, it is composed of four subunits: Hpr1, Tho2, Thp1, and Mft1, while the human complex is composed of 7 subunits.","definition_xrefs":["PMID:11979277","PMID:16983072","PMID:11060033","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"THO complex","termid":"GO:0000347"},{"relation_name":"part_of","term_name":"transcription export complex","termid":"GO:0000346"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"THO complex part of transcription export complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"THO complex part of TREX complex","type":"exact"}],"termid":"GO:0000445","terms_by_termid":{"GO:0000445":null}}


id: PATO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being in a position that produces a separation in, or acting to separate, another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separating","termid":"PATO:0002525"}


id: MONDO:0010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mitochondrial oxidative phosphorylation disorder characterized by myoclonic seizures, ataxia, generalized epilepsy, muscle weakness and ragged red fibers in the muscle biopsy.","definition_xrefs":["Orphanet:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"mitochondrial encephalomyopathy","termid":"MONDO:0004675"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005027","MONDO:0005066","MONDO:0002320","MONDO:0004069"],"is_obsolete":false,"name":"MERRF syndrome","secondary_identifiers":["ICD10CM:E88.42","MESH:D017243","NANDO:1200177","NORD:1441","SCTID:68448003","MEDGEN:56486","NCIT:C84889","DOID:310","MedDRA:10069825","NANDO:2200526","UMLS:C0162672","OMIM:545000","ICD9:277.87","GARD:7144"],"synonyms":[{"name":"Fukuhara syndrome","type":"exact"},{"name":"MERRF","type":"exact"},{"name":"MERRF syndrome","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibers","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibres","type":"exact"},{"name":"myoclonic epilepsy associated with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged red fibres","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibres","type":"related"},{"name":"myoclonic epilepsy with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy with ragged red fibres","type":"related"},{"name":"myoclonus epilepsy and ragged red fibers","type":"exact"},{"name":"myoclonus epilepsy and ragged red fibres","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibers","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers (MERRF syndrome)","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres (MERRF syndrome)","type":"exact"},{"name":"myoencephalopathy ragged-red fiber disease","type":"related"},{"name":"myoencephalopathy ragged-red fibre disease","type":"related"}],"termid":"MONDO:0010790","xrefs":{"Monarch":{"xref_id":"0010790"}}}


id: FYPO:0000744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to actin cortical patch","synonyms":[{"name":"normal protein localisation to actin cortical patch","type":"exact"},{"name":"normal protein localization to F-actin patch","type":"exact"},{"name":"normal protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"normal protein localization to actin patch","type":"exact"}],"termid":"FYPO:0000744"}


id: PBO:0065375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 3","termid":"PBO:0065375"}


id: MONDO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal prostatitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"gonococcal prostatitis","termid":"MONDO:0021161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal prostatitis","secondary_identifiers":["SCTID:111806005","UMLS:C0153192","DOID:13943","ICD9:098.12","icd11.foundation:1552826290","MEDGEN:509194"],"synonyms":[{"name":"acute gonococcal prostatitis","type":"exact"},{"name":"gonococcal prostatitis","type":"broad"},{"name":"gonococcal prostatitis (acute)","type":"exact"},{"name":"gonococcal prostatitis, acute","type":"exact"}],"termid":"MONDO:0001838","xrefs":{"Monarch":{"xref_id":"0001838"}}}


id: PBO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B12","termid":"PBO:0061334"}


id: PBO:0049136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein pathway suppressor 2 pseudogene 2","termid":"PBO:0049136"}


id: PBO:0012253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 2 (predicted)","termid":"PBO:0012253"}


id: PBO:0062757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 2","termid":"PBO:0062757"}


id: MONDO:0002804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the apocrine sweat glands. Representative examples include tubular apocrine adenoma and external auditory canal ceruminous adenoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"apocrine adenoma","secondary_identifiers":["MEDGEN:90767","NCIT:C4168","ICDO:8401/0","DOID:3895","UMLS:C0334345","SCTID:307596009"],"synonyms":[{"name":"tubular apocrine adenoma","type":"narrow"}],"termid":"MONDO:0002804","xrefs":{"Monarch":{"xref_id":"0002804"}}}


id: MONDO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Gadus morhua.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete Atlantic cod allergy (obsolete MONDO:0000789)","secondary_identifiers":["DOID:0060514"],"synonyms":[{"name":"Gadus morhua allergic disease","type":"exact"},{"name":"Gadus morhua caused allergic disease","type":"exact"},{"name":"Gadus morhua fish allergy","type":"exact"},{"name":"allergy of Gadus morhua","type":"exact"}],"termid":"MONDO:0000789","xrefs":{"Monarch":{"xref_id":"0000789"}}}


id: GO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme and prosthetic group catabolic process (obsolete GO:0046139)","synonyms":[{"name":"coenzyme and prosthetic group breakdown","type":"exact"},{"name":"coenzyme and prosthetic group catabolic process","type":"exact"},{"name":"coenzyme and prosthetic group catabolism","type":"exact"},{"name":"coenzyme and prosthetic group degradation","type":"exact"}],"termid":"GO:0046139"}


id: PBO:0073552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and multiple ankyrin repeat domains 3","termid":"PBO:0073552"}


id: PBO:0034669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_sumoylated_protein_in_cell","termid":"PBO:0034669"}


id: GO:0033847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + hydrogen sulfide = L-cysteine + phosphate.","definition_xrefs":["EC:2.5.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"O-phosphoserine sulfhydrylase activity","secondary_identifiers":["MetaCyc:2.5.1.65-RXN","RHEA:10252"],"synonyms":[{"name":"O-phospho-L-serine:hydrogen-sulfide 2-amino-2-carboxyethyltransferase activity","type":"related"},{"name":"O-phosphoserine(thiol)-lyase activity","type":"related"}],"termid":"GO:0033847"}


id: PATO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A porosity quality inhering in a bearer by virtue of the bearer's being incapable of admitting the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porosity","termid":"PATO:0000973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-porous","termid":"PATO:0000985"}


id: FYPO:0001442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 acetylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone lysine H3 K9 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001442"}


id: PBO:0042258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4","termid":"PBO:0042258"}


id: GO:0102646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 14betaH-scalarane-17alpha-19-diol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["GOC:pz","PMID:24200803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"14betaH-scalarane-17alpha-19-diol synthase activity","secondary_identifiers":["MetaCyc:RXN-15759"],"termid":"GO:0102646"}


id: PBO:0083460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ILS1/YBL076C","termid":"PBO:0083460"}


id: PBO:0034389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_directly_develop_into","termid":"PBO:0034389"}


id: GO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the site in the cell of an imaginal disc-derived wing at which a prehair initiates outgrowth. Restriction of prehair initiation to the distalmost part of a cell is essential to ensure that each wing epithelial cell produces one adult hair that points distally.","definition_xrefs":["ISBN:0815340729","PMID:8947551","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"},{"relation_name":"part_of","term_name":"establishment of imaginal disc-derived wing hair orientation","termid":"GO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair site selection","synonyms":[{"name":"prehair localization","type":"related"},{"name":"wing hair site selection","type":"exact"}],"termid":"GO:0035320"}


id: PBO:0062844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1 pseudogene 1","termid":"PBO:0062844"}


id: MONDO:0007897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leukemia, chronic lymphocytic (obsolete MONDO:0007897)","termid":"MONDO:0007897","xrefs":{"Monarch":{"xref_id":"0007897"}}}


id: PBO:0054819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2232","termid":"PBO:0054819"}


id: PBO:0062262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 18","termid":"PBO:0062262"}


id: FYPO:0002803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole organization is abnormal. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GO:0007033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole organization","synonyms":[{"name":"abnormal vacuolar organisation","type":"exact"},{"name":"abnormal vacuolar organization","type":"exact"},{"name":"abnormal vacuole organisation","type":"exact"}],"termid":"FYPO:0002803"}


id: PBO:0017093
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(6)","termid":"PBO:0017093"}


id: PR:O74407
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aspartate--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.07c","secondary_identifiers":["UniProtKB:O74407"],"synonyms":[{"name":"AspRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DARS","type":"exact"},{"name":"aspartyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74407"}


id: FYPO:0001085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered polysaccharide level during vegetative growth","synonyms":[{"name":"abnormal polysaccharide level during vegetative growth","type":"exact"},{"name":"altered cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"altered polysaccharide level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001085"}


id: PBO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sh3 Homology Domain","termid":"PBO:0002081"}


id: GO:0004845
data:
  {"annotated_genes":["SJAG_04713","SJAG_04354","SJAG_04709","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89226,90220,93748,116761],"is_not":false,"summary":null,"term":"GO:0004845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil.","definition_xrefs":["RHEA:13017","EC:2.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"uracil phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00966","MetaCyc:URACIL-PRIBOSYLTRANS-RXN"],"synonyms":[{"name":"UMP diphosphorylase activity","type":"related"},{"name":"UMP pyrophosphorylase activity","type":"related"},{"name":"UMP:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"UMP:pyrophosphate phosphoribosyltransferase activity","type":"related"},{"name":"UPRTase activity","type":"related"},{"name":"uridine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"uridine monophosphate pyrophosphorylase activity","type":"related"},{"name":"uridylate pyrophosphorylase activity","type":"related"},{"name":"uridylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004845","terms_by_termid":{"GO:0004845":null}}


id: GO:2000508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"}


id: PBO:0017420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contains","termid":"PBO:0017420"}


id: GO:0046162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme c, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme C metabolic process","synonyms":[{"name":"haem C metabolic process","type":"exact"},{"name":"haem C metabolism","type":"exact"},{"name":"heme C metabolism","type":"exact"}],"termid":"GO:0046162"}


id: GO:0051624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of norepinephrine uptake","termid":"GO:0051622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inhibition of norepinephrine uptake","synonyms":[{"name":"inhibition of levarterenol uptake","type":"exact"},{"name":"inhibition of noradrenaline uptake","type":"exact"},{"name":"inhibition of norepinephrine import","type":"exact"}],"termid":"GO:0051624"}


id: FYPO:0007113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton during all or part of the meiotic cell cycle. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GO:0000226","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","synonyms":[{"name":"abnormal microtubule cytoskeleton organisation during meiotic cell cycle","type":"exact"},{"name":"abnormal microtubule organisation during meiotic cell cycle","type":"related"},{"name":"abnormal microtubule organization during meiotic cell cycle","type":"related"},{"name":"disorganized microtubule cytoskeleton during meiotic cell cycle","type":"related"},{"name":"microtubule cytoskeleton defects during meiotic cell cycle","type":"exact"},{"name":"microtubule organization defects during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007113"}


id: PBO:0080533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 4","termid":"PBO:0080533"}


id: MONDO:0003370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the retroperitoneum. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C27904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retroperitoneal sarcoma","termid":"MONDO:0001501"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"retroperitoneal leiomyosarcoma","secondary_identifiers":["UMLS:C2187547","DOID:5284","MEDGEN:412162"],"synonyms":[{"name":"leiomyosarcoma of retroperitoneal space","type":"exact"},{"name":"retroperitoneal leiomyosarcoma","type":"exact"},{"name":"retroperitoneal space leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003370","xrefs":{"Monarch":{"xref_id":"0003370"}}}


id: PBO:0076314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synemin","termid":"PBO:0076314"}


id: MONDO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelioid cell melanoma that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant ciliary body melanoma","termid":"MONDO:0003912"},{"relation_name":"is_a","term_name":"epithelioid cell uveal melanoma","termid":"MONDO:0006200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"ciliary body epithelioid cell melanoma","secondary_identifiers":["MEDGEN:272484","DOID:7042","UMLS:C1333050","NCIT:C6119"],"synonyms":[{"name":"ciliary body epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma of ciliary body","type":"exact"},{"name":"epithelioid cell melanoma of the ciliary body","type":"exact"}],"termid":"MONDO:0004086","xrefs":{"Monarch":{"xref_id":"0004086"}}}


id: PATO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000086 absolute sensitivity (obsolete PATO:0000086)","termid":"PATO:0000086"}


id: SO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed transcript that does not contain a CDS that fullfills annotation criteria and not necessarily functionally non-coding.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene_processed_transcript","termid":"SO:0002111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_pseudogene_processed_transcript","synonyms":[{"name":"polymorphic pseudogene processed transcript","type":"exact"}],"termid":"SO:0002116"}


id: PBO:0084981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; enzymatic component of one of several partly redundant surveillance pathways involved in decapping of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; also possesses deCoAping activity involved in the decapping of non-canonical dephospho-CoA capped RNA (dpCoA-RNA); nudix hydrolase family member","termid":"PBO:0084981"}


id: PBO:0002994
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.77","termid":"PBO:0002994"}


id: GO:0035753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of DNA trinucleotide repeats. DNA trinucleotide repeats are naturally occurring runs of three base-pairs.","definition_xrefs":["PMID:21347277","SO:0000291","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"maintenance of DNA trinucleotide repeats","termid":"GO:0035753"}


id: GO:0099072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the the local concentration of neurotransmitter receptor at the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"}


id: PBO:0071478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 19","termid":"PBO:0071478"}


id: GO:0097092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.","definition_xrefs":["GOC:rs","PMID:19729090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyacyltrehalose metabolic process","synonyms":[{"name":"polyacyltrehalose metabolism","type":"exact"}],"termid":"GO:0097092"}


id: MONDO:0018579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of ketone body transport (obsolete MONDO:0018579)","secondary_identifiers":["Orphanet:438072"],"synonyms":[{"name":"disorder of keton body transport","type":"related"},{"name":"disorder of ketone body transport","type":"exact"}],"termid":"MONDO:0018579","xrefs":{"Monarch":{"xref_id":"0018579"}}}


id: PBO:0088241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S41","termid":"PBO:0088241"}


id: FYPO:0006373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin islands occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:29214404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0006373"}


id: PBO:0055214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2640","termid":"PBO:0055214"}


id: CL:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"cell","definition":"A thick walled spore that stores and protects one or more nuclei following sexual reproduction in an Ascomycete.","definition_xrefs":["GOC:tfm","ISBN:08199377X","SGD:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell","termid":"CL:0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ascospore","termid":"CL:0000607"}


