# terms

id: PBO:0069513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 782, pseudogene","termid":"PBO:0069513"}


id: PBO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein","termid":"PBO:0000229"}


id: PBO:0054256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1640","termid":"PBO:0054256"}


id: GO:0005781
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome targeting signal receptor complex (obsolete GO:0005781)","synonyms":[{"name":"peroxisome targeting signal receptor complex","type":"exact"}],"termid":"GO:0005781"}


id: PBO:0041665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACTIN antisense RNA 1","termid":"PBO:0041665"}


id: MONDO:1012017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atopy, non-human animal","termid":"MONDO:1011733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atopy, dog","secondary_identifiers":["OMIA:000082-9615"],"termid":"MONDO:1012017","xrefs":{"Monarch":{"xref_id":"1012017"}}}


id: RO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a muscle and a motor neuron that synapses to it via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_by","termid":"RO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_by_via_type_Is_bouton","termid":"RO:0002112"}


id: SO:0002259
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a cluster of experimentally determined polyadenylation sites, typically less than 25 bp in length and associated with a single polyadenylation signal.","definition_xrefs":["PMID:24072873","PMID:25906188","PMID:17202160"],"direct_ancestors":[{"relation_name":"has_part","term_name":"polyA_site","termid":"SO:0000553"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_site_cluster","synonyms":[{"name":"polyA cluster","type":"exact"},{"name":"polyA site cluster","type":"exact"},{"name":"polyA_cluster","type":"exact"}],"termid":"SO:0002259"}


id: GO:0031058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent alteration of a histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone modification (obsolete GO:0031058)","synonyms":[{"name":"activation of histone modification","type":"narrow"},{"name":"stimulation of histone modification","type":"narrow"},{"name":"up regulation of histone modification","type":"exact"},{"name":"up-regulation of histone modification","type":"exact"},{"name":"upregulation of histone modification","type":"exact"}],"termid":"GO:0031058"}


id: MONDO:0010163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosinosis","secondary_identifiers":["OMIM:276800","MESH:C562659","ICD9:270.2","MEDGEN:78683","SCTID:57414003","UMLS:C0268484"],"synonyms":[{"name":"Tyrosinosis","type":"exact"}],"termid":"MONDO:0010163","xrefs":{"Monarch":{"xref_id":"0010163"}}}


id: PBO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis CGR1 family (predicted)","termid":"PBO:0002225"}


id: MONDO:0016063
data:
  {"annotated_genes":["SJAG_04206","SJAG_02426","SJAG_04394","SJAG_03131","SJAG_02539","SJAG_03153"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008021"},{"annotations":[86977,86978,86976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014048"},{"annotations":[87533,87534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014802"}]},"cv_name":"mondo","definition":"A genodermatosis characterized by the presence of multiple hamartomas in various tissues and an increased risk for malignancies of the breast, thyroid, endometrium, kidney and colorectum. When CS is accompanied by germline PTEN mutations, it belongs to the PTEN hamartoma tumor syndrome (PHTS) group.","definition_xrefs":["Orphanet:201"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"},{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_02539":null,"SJAG_03131":null,"SJAG_03153":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"Cowden disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10051906","SCTID:58037000","NANDO:2200918","NCIT:C3076","MEDGEN:5420","OMIMPS:158350","UMLS:C0018553","DOID:6457","GARD:6202","MESH:D006223","NCIT:C8419"],"synonyms":[{"name":"CD","type":"related"},{"name":"Cowden disease","type":"exact"},{"name":"Cowden syndrome","type":"exact"},{"name":"Cowden's disease","type":"exact"},{"name":"MHAM","type":"related"},{"name":"dysplastic gangliocytoma of cerebellum","type":"related"},{"name":"multiple hamartoma syndrome","type":"exact"}],"termid":"MONDO:0016063","terms_by_termid":{"MONDO:0008021":null,"MONDO:0014048":null,"MONDO:0014802":null},"xrefs":{"Monarch":{"xref_id":"0016063"}}}


id: PBO:0028145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleolus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028145"}


id: PBO:0078436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-6","termid":"PBO:0078436"}


id: GO:0030273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the cyclic peptide hormone melanin-concentrating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor activity","synonyms":[{"name":"MCH receptor","type":"exact"}],"termid":"GO:0030273"}


id: MONDO:0100476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing acquired partial lipodystrophy.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipodystrophy, partial, acquired, susceptibility to","secondary_identifiers":["OMIM:608709","UMLS:C3887501","MEDGEN:854363"],"synonyms":[{"name":"APLD, susceptibility to","type":"exact"},{"name":"barraquer-simons syndrome","type":"exact"},{"name":"lipodystrophy, cephalothoracic type","type":"exact"},{"name":"lipodystrophy, partial, acquired, susceptibility","type":"exact"},{"name":"lipodystrophy, partial, progressive","type":"exact"}],"termid":"MONDO:0100476","xrefs":{"Monarch":{"xref_id":"0100476"}}}


id: GO:0031381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A virus-specific protein complex that possesses RNA-dependent RNA polymerase activity and replicates the genome of an RNA virus.","definition_xrefs":["PMID:15613301","GOC:mah","PMID:15574411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"viral RNA-directed RNA polymerase complex","termid":"GO:0031381"}


id: GO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits.","definition_xrefs":["PMID:8918456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"endocytic targeting sequence binding","termid":"GO:0089710"}


id: FYPO:0003007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to caffeine is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during cellular response to caffeine","synonyms":[{"name":"decreased protein accumulation during cellular response to caffeine","type":"related"},{"name":"decreased protein level during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003007"}


id: GO:2000134
data:
  {"annotated_genes":["SJAG_00996","SJAG_00169","SJAG_00071","SJAG_03048","SJAG_05346","SJAG_01210","SJAG_02026","SJAG_03681","SJAG_00991","SJAG_03591","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93516,93930,95100,100659],"is_not":false,"summary":null,"term":"GO:2000134"},{"annotations":[103415,110709,117743,104156,90713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[93079,111494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G1/S phase transition","termid":"GO:1902807"},{"relation_name":"is_a","term_name":"regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000045"},{"relation_name":"negatively_regulates","term_name":"G1/S transition of mitotic cell cycle","termid":"GO:0000082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02026":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"negative regulation of G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000134","terms_by_termid":{"GO:0031568":null,"GO:0031571":null,"GO:2000134":null}}


id: SO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An internal RNA loop where the extent of the loop on both stands is the same size.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_internal_loop","termid":"SO:0000020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetric_RNA_internal_loop","synonyms":[{"name":"A-minor RNA motif","type":"exact"}],"termid":"SO:0000025"}


id: PBO:0064152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 4","termid":"PBO:0064152"}


id: MONDO:0014645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"BENTA disease (B cell Expansion with N F-N:B and T cell Anergy) is a very rare congenital immune deficiency disorder. The main symptoms include spleen enlargement (splenomegalia) and frequent ear, sinus, and lung infections early in life. Some patients can present with molluscum contagiosum or chronic Epstein-Barr virus (EBV) infection. Blood exams show alterations of several immune cells with very high numbers of polyclonal B cell lymphocytos (above 2200/N<l) and few memory B cells. Other findings are low levels of IgM in blood and poor antibody responses to specific vaccines. BENTA disease is caused by mutations in the CARD11 gene. There is no established treatment, but some patients have their spleen removed and there is one case of a hematopoietic stem cell transplantation with good results.","definition_xrefs":["GARD:0013339"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"BENTA disease","secondary_identifiers":["MEDGEN:1641265","Orphanet:464336","OMIM:616452","UMLS:C4551967","GARD:13339"],"synonyms":[{"name":"B-cell expansion with NF-kB and T-cell anergy disease","type":"exact"},{"name":"B-cell expansion with NFKB and T-cell anergy","type":"related"},{"name":"BENTA","type":"related"}],"termid":"MONDO:0014645","xrefs":{"Monarch":{"xref_id":"0014645"}}}


id: PBO:0060379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYRF antisense RNA 1","termid":"PBO:0060379"}


id: MONDO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Chandler syndrome (obsolete MONDO:0001311)","termid":"MONDO:0001311","xrefs":{"Monarch":{"xref_id":"0001311"}}}


id: GO:0043000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi to plasma membrane CFTR protein transport (obsolete GO:0043000)","synonyms":[{"name":"Golgi to plasma membrane cystic fibrosis transmembrane conductance regulator protein transport","type":"exact"}],"termid":"GO:0043000"}


id: PBO:0028951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_morphology_during_recovery_from_stationary_phase","termid":"PBO:0028951"}


id: SOFP:anticodon
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"anticodon coded for by a tRNA transcript feature","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon","termid":"SOFP:anticodon"}


id: FYPO:0002941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"swollen spheroid cell","synonyms":[{"name":"enlarged spheroid cell","type":"related"},{"name":"enlarged volume spheroid cell","type":"exact"},{"name":"large spheroid cell","type":"related"},{"name":"spheroid cell with increased cell size","type":"related"},{"name":"spheroid cell with increased cell volume","type":"exact"},{"name":"swollen rounded cell","type":"exact"}],"termid":"FYPO:0002941"}


id: CHEBI:27732
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine","termid":"CHEBI:27732"}


id: MONDO:0957397
data:
  {"annotated_genes":["SJAG_05349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88090],"is_not":false,"summary":null,"term":"MONDO:0957397"}]},"cv_name":"mondo","definition":"An autosomal dominant intellectual disability disorder characterized by developmental delay, predominant speech delay, autistic or attention-deficit/hyperactivity disorder features, overfriendliness, generalized hypotonia, overweight/obesity, and dysmorphic features.","definition_xrefs":["PMID:35567594","OMIM:620439","PMID:37272925","Orphanet:652487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 72","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1841248","UMLS:C5830612"],"synonyms":[{"name":"MRD72","type":"exact"},{"name":"SRRM2-related neurodevelopmental disorder","type":"exact"},{"name":"autosomal dominant intellectual developmental disorder-72","type":"exact"},{"name":"developmental delay-overweight-facial dysmorphism-behavioral abnormalities syndrome","type":"exact"}],"termid":"MONDO:0957397","terms_by_termid":{"MONDO:0957397":null},"xrefs":{"Monarch":{"xref_id":"0957397"}}}


id: PBO:0078947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 5-1","termid":"PBO:0078947"}


id: PBO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E7, pseudogene","termid":"PBO:0075527"}


id: GO:2000676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell apoptotic process","termid":"GO:2000674"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"positive regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"positive regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"positive regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000676"}


id: GO:0031041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 5 O-glycan structure, GalNAc-alpha-(1->3)-GalNAc.","definition_xrefs":["GOC:mah","PMID:10580130","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete O-glycan processing, core 5 (obsolete GO:0031041)","termid":"GO:0031041"}


id: MONDO:0018714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate, rarely metastasizing blood vessel neoplasm. It is characterized by the presence of lymphatic-like vascular channels and papillary endothelial proliferation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioendothelioma","termid":"MONDO:0021121"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary intralymphatic angioendothelioma","secondary_identifiers":["NCIT:C7526","Orphanet:458768","ICDO:9135/1","MEDGEN:138037","UMLS:C0346087","GARD:21909"],"synonyms":[{"name":"Dabska tumor","type":"exact"},{"name":"Dabska tumour","type":"exact"},{"name":"PILA","type":"exact"},{"name":"malignant endothelial papillary angioendothelioma","type":"exact"},{"name":"papillary Endovascular angioendothelioma","type":"exact"},{"name":"papillary intralymphatic angioendothelioma","type":"exact"},{"name":"pila","type":"exact"}],"termid":"MONDO:0018714","xrefs":{"Monarch":{"xref_id":"0018714"}}}


id: PBO:0052396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C2","termid":"PBO:0052396"}


id: MONDO:0014271
data:
  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87394],"is_not":false,"summary":null,"term":"MONDO:0014271"}]},"cv_name":"mondo","definition":"STT3B-CDG is a form of congenital disorders of N-linked glycosylation characterized by intrauterine growth retardation, microcephaly, failure to thrive, developmental delay, intellectual disability, hypotonia, seizures, optic nerve atrophy and respiratory difficulties. Genital abnormalities (micropenis, hypoplastic scrotum, undescended testes) have also been reported. STT3B-CDG is caused by mutations in the gene STT3B (3p24.1).","definition_xrefs":["Orphanet:370924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"STT3B-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17603","OMIM:615597","SCTID:733112007","MEDGEN:419309","UMLS:C2931007","MESH:C535751","DOID:0080573"],"synonyms":[{"name":"CDG IX","type":"related"},{"name":"CDG syndrome type IX","type":"exact"},{"name":"CDG-Ix","type":"exact"},{"name":"CDG1X","type":"exact"},{"name":"STT3B-CDG","type":"exact"},{"name":"STT3B-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IX","type":"exact"},{"name":"congenital disorder of glycosylation type 1x","type":"exact"},{"name":"congenital disorder of glycosylation type IX","type":"exact"},{"name":"congenital disorder of glycosylation, type IX","type":"related"}],"termid":"MONDO:0014271","terms_by_termid":{"MONDO:0014271":null},"xrefs":{"Monarch":{"xref_id":"0014271"}}}


id: PBO:0080222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIPR1 antisense RNA 1","termid":"PBO:0080222"}


id: PBO:0062422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 83 pseudogene","termid":"PBO:0062422"}


id: MONDO:0011358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue nevi, familial multiple","secondary_identifiers":["UMLS:C1863617","MEDGEN:400340","MESH:C566346","OMIM:603670"],"synonyms":[{"name":"blue nevi, familial multiple","type":"exact"}],"termid":"MONDO:0011358","xrefs":{"Monarch":{"xref_id":"0011358"}}}


id: GO:0019912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; increases the activity of a cyclin-dependent protein kinase (CDK).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase activating kinase activity (obsolete GO:0019912)","synonyms":[{"name":"CAK","type":"exact"},{"name":"cdk-activating kinase activity","type":"exact"},{"name":"cyclin-dependent protein kinase activating kinase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0019912"}


id: PBO:0063145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATJ crumbs cell polarity complex component","termid":"PBO:0063145"}


id: MONDO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","secondary_identifiers":["UMLS:C1850806","MEDGEN:338127","OMIM:254190","MESH:C564979"],"synonyms":[{"name":"myasthenia, congenital, refractory to acetylcholinesterase inhibitors","type":"exact"}],"termid":"MONDO:0009687","xrefs":{"Monarch":{"xref_id":"0009687"}}}


id: MONDO:0013099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypopituitarism is characterized by multiple pituitary hormone deficiency, including somatotroph, thyrotroph, lactotroph, corticotroph or gonadotroph deficiencies, due to mutations of pituitary transcription factors involved in pituitary ontogenesis. Congenital hypopituitarism is rare compared with the high incidence of hypopituitarism induced by pituitary adenomas, transsphenoidal surgery or radiotherapy.","definition_xrefs":["Orphanet:95494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hypopituitarism","termid":"MONDO:0005152"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"combined pituitary hormone deficiencies, genetic form","secondary_identifiers":["ICD10CM:E23.0","OMIMPS:613038","SCTID:718182008","GARD:10602","UMLS:C4273747","MEDGEN:906592"],"synonyms":[{"name":"combined pituitary hormone deficiencies, genetic forms","type":"related"},{"name":"familial congenital hypopituitarism","type":"exact"},{"name":"familial hypopituitarism","type":"related"},{"name":"genetic hypopituitarism","type":"exact"},{"name":"multiple pituitary hormone deficiencies, genetic forms","type":"exact"},{"name":"pituitary hormone deficiency, combined","type":"exact"}],"termid":"MONDO:0013099","xrefs":{"Monarch":{"xref_id":"0013099"}}}


id: GO:0042368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"vitamin D biosynthetic process","synonyms":[{"name":"calciferol biosynthesis","type":"narrow"},{"name":"calciferol biosynthetic process","type":"narrow"},{"name":"cholecalciferol biosynthesis","type":"narrow"},{"name":"cholecalciferol biosynthetic process","type":"narrow"},{"name":"ergocalciferol biosynthesis","type":"narrow"},{"name":"ergocalciferol biosynthetic process","type":"narrow"},{"name":"vitamin D anabolism","type":"exact"},{"name":"vitamin D biosynthesis","type":"exact"},{"name":"vitamin D formation","type":"exact"},{"name":"vitamin D synthesis","type":"exact"}],"termid":"GO:0042368"}


id: GO:0022810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"membrane potential driven uniporter activity","synonyms":[{"name":"porter","type":"broad"}],"termid":"GO:0022810"}


id: PBO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Cuf1","termid":"PBO:0002152"}


id: PATO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to being capable of indefinite growth or division.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immortal","termid":"PATO:0001991"}


id: PBO:0038336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurs_across","termid":"PBO:0038336"}


id: GO:0002814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-negative bacteria.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide biosynthetic process","termid":"GO:0002809"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002813"},{"relation_name":"negatively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-negative bacteria","termid":"GO:0002812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","synonyms":[{"name":"down regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"down-regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"downregulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"exact"},{"name":"inhibition of biosynthetic process of antibacterial peptides active against Gram-negative bacteria","type":"narrow"}],"termid":"GO:0002814"}


id: PBO:0068704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 85, pseudogene","termid":"PBO:0068704"}


id: PBO:0005049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght5","termid":"PBO:0005049"}


id: PBO:0072786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 1","termid":"PBO:0072786"}


id: FYPO:0004111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic G2 phase","synonyms":[{"name":"decreased protein phosphorylation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during mitotic G2-phase","type":"exact"},{"name":"decreased protein/peptide phosphorylation during mitotic G2 phase","type":"exact"},{"name":"reduced protein phosphorylation during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0004111"}


id: PBO:0116207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase, implicated in vacuole related processes","termid":"PBO:0116207"}


id: GO:0043394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteoglycan, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"proteoglycan binding","termid":"GO:0043394"}


id: PBO:0076282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse defective Rho GTPase homolog 2","termid":"PBO:0076282"}


id: GO:0050497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alkylthio group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai","EC:2.8.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alkylthioltransferase activity","synonyms":[{"name":"transferase activity, transferring alkylthio groups","type":"exact"}],"termid":"GO:0050497"}


id: MONDO:0006508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infantile epileptic encephalopathy (obsolete MONDO:0006508)","termid":"MONDO:0006508","xrefs":{"Monarch":{"xref_id":"0006508"}}}


id: MONDO:0014493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatic mutation in the CTLA4 gene resulting in only a single functional gene. Haploinsufficiency for CTLA4 is associated with autoimmune lymphoproliferative syndrome, type V.","definition_xrefs":["NCIT:C126341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency","secondary_identifiers":["MEDGEN:863651","OMIM:616100","GARD:12316","UMLS:C4015214","Orphanet:436159"],"synonyms":[{"name":"ALPS due to CTLA4 haploinsufficiency","type":"exact"},{"name":"ALPS type 5","type":"exact"},{"name":"ALPS type V","type":"exact"},{"name":"ALPS5","type":"related"},{"name":"CHAI","type":"exact"},{"name":"CTLA-4 haploinsufficiency with autoimmune infiltration disease","type":"exact"},{"name":"CTLA4 haploinsufficiency","type":"exact"},{"name":"CTLA4 haploinsufficiency with autoimmune infiltration","type":"related"},{"name":"autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type 5","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type V","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 5","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type V","type":"related"},{"name":"chai","type":"exact"},{"name":"immune dysregulation with autoimmunity, immunodeficiency, and lymphoproliferation","type":"exact"}],"termid":"MONDO:0014493","xrefs":{"Monarch":{"xref_id":"0014493"}}}


id: PBO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 21 pseudogene","termid":"PBO:0070107"}


id: PBO:0091075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5","termid":"PBO:0091075"}


id: GO:0052903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(1)-acetylspermine + O2 = 3-acetamidopropanal + H2O2 + spermidine. Also converts N(1)-acetylspermidine to putrescine.","definition_xrefs":["EC:1.5.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N(1)-acetylpolyamine oxidase (3-acetamidopropanal-forming) activity","secondary_identifiers":["KEGG_REACTION:R03899","MetaCyc:RXN-12090"],"synonyms":[{"name":"N(1)-acetylpolyamine oxidase activity","type":"broad"},{"name":"N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity","type":"narrow"},{"name":"N1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity","type":"narrow"}],"termid":"GO:0052903"}


id: GO:0042196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorinated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with chlorine atoms.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chlorinated hydrocarbon metabolic process","synonyms":[{"name":"chlorinated hydrocarbon metabolism","type":"exact"}],"termid":"GO:0042196"}


id: PBO:0003769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3g","termid":"PBO:0003769"}


id: MONDO:0007158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal arthrogryposis type 5 is an inherited developmental defect syndrome characterized by multiple congenital contractures of limbs, without primary neurologic and/or muscle disease that affects limb function, and ocular anomalies (ptosis, external ophtalmoplegia and/or strabismus). Intelligence is normal.","definition_xrefs":["Orphanet:1154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis- oculomotor limitation-electroretinal anomalies syndrome","secondary_identifiers":["DOID:0111608","GARD:4047","SCTID:715217004","MEDGEN:350678","OMIM:108145","UMLS:C1862472"],"synonyms":[{"name":"Arthogryposis with oculomotor limitation and electroretinal abnormalities","type":"related"},{"name":"DA5","type":"related"},{"name":"arthrogryposis ophthalmoplegia retinopathy","type":"related"},{"name":"arthrogryposis with oculomotor limitation and electroretinal abnormalities","type":"related"},{"name":"arthrogryposis, distal, type 2B","type":"related"},{"name":"arthrogryposis, distal, type 5","type":"related"},{"name":"arthrogryposis- oculomotor limitation-electroretinal anomalies syndrome","type":"exact"},{"name":"arthrogryposis-oculomotor limitation-electroretinal anomalies syndrome","type":"related"},{"name":"distal arthrogryposis type 5","type":"exact"},{"name":"distal arthrogryposis type IIB","type":"exact"},{"name":"distal arthrogryposis with ophthalmoplegia","type":"exact"},{"name":"oculomelic amyoplasia","type":"exact"}],"termid":"MONDO:0007158","xrefs":{"Monarch":{"xref_id":"0007158"}}}


id: GO:0140423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of a pattern-triggered immunity PTI signaling pathway. PTI signaling pathways are found in plants.","definition_xrefs":["PMID:30584105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"effector-mediated suppression of host pattern-triggered immunity","termid":"GO:0052034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host pattern-triggered immunity signaling","synonyms":[{"name":"effector-mediated suppression of PTI signalling","type":"exact"},{"name":"effector-mediated suppression of host PRR signaling","type":"broad"},{"name":"effector-mediated suppression of host PRR signalling","type":"broad"},{"name":"effector-mediated suppression of host pattern recognition receptor signaling","type":"broad"},{"name":"effector-mediated suppression of pattern-triggered immunity signaling","type":"exact"}],"termid":"GO:0140423"}


id: PBO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 1","termid":"PBO:0045471"}


id: PBO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Complexed With cdc Five","termid":"PBO:0016524"}


id: PBO:0050901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha inducible protein 27 like 1","termid":"PBO:0050901"}


id: GO:0015931
data:
  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id: GO:0050360
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id: GO:0018235
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id: FYPO:0006754
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id: MONDO:0015383
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id: GO:0046213
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id: PBO:0048423
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-tRNA amidotransferase subunit B","termid":"PBO:0048423"}


id: PBO:0004229
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent tRNA methyltransferase (predicted)","termid":"PBO:0004229"}


id: MONDO:0032680
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id: MONDO:0018659
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id: PR:Q9UU94
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epl1 gene.","definition_xrefs":["UniProtKB:Q9UU94","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of polycomb-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.05c","synonyms":[{"name":"Spom972h-epl1","type":"exact"}],"termid":"PR:Q9UU94"}


id: GO:0072335
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id: GO:1903808
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id: GO:0090728
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id: GO:0010807
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id: GO:0072522
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synthesis","type":"exact"}],"termid":"GO:0072522","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006164":null,"GO:0006166":null,"GO:0006168":null,"GO:0006169":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006190":null,"GO:0006741":null,"GO:0009113":null,"GO:0009435":null,"GO:0015937":null,"GO:0019427":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0035338":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:0046084":null,"GO:0046086":null,"GO:1905707":null,"GO:1990181":null,"GO:2001295":null}}


id: MONDO:0004723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the liver. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"hepatobiliary benign neoplasm","termid":"MONDO:0859689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver leiomyoma","secondary_identifiers":["UMLS:C1333968","DOID:917","MEDGEN:232276"],"synonyms":[{"name":"hepatic leiomyoma","type":"exact"},{"name":"leiomyoma of liver","type":"exact"},{"name":"leiomyoma of the liver","type":"exact"},{"name":"liver leiomyoma","type":"exact"}],"termid":"MONDO:0004723","xrefs":{"Monarch":{"xref_id":"0004723"}}}


id: GO:1990809
data:
  {"annotated_genes":["SJAG_01460","SJAG_03812","SJAG_03795","SJAG_01848","SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105251,110376,110458,116809,120456],"is_not":false,"summary":null,"term":"GO:1990809"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) tubular network membrane.","definition_xrefs":["PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"},{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01460":null,"SJAG_01848":null,"SJAG_03795":null,"SJAG_03812":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990809","terms_by_termid":{"GO:1990809":null}}


id: GO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G-protein beta subunit.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G-protein beta-subunit binding","synonyms":[{"name":"G-beta protein subunit binding","type":"exact"}],"termid":"GO:0031681"}


id: FYPO:0007938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tea tree oil. Cells stop growing (and may die) at a concentration of tea tree oil that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to tea tree oil","termid":"FYPO:0007938"}


id: PBO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase family","termid":"PBO:0000250"}


id: MOD:00850
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an unnatural residue that is not considered to be derived from a natural residue by some chemical process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unnatural residue","termid":"MOD:00850"}


id: GO:0099092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane forming an electron dense disc. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic density","termid":"GO:0014069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic density, intracellular component","termid":"GO:0099092"}


id: PBO:0065631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 11","termid":"PBO:0065631"}


id: GO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of MyD88-independent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of MyD88-independent toll-like receptor signaling pathway","termid":"GO:0034127"},{"relation_name":"positively_regulates","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MyD88-independent toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of MyD88-independent TLR signaling pathway","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034129"}


id: PBO:0059467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSH5-SAPCD1 readthrough (NMD candidate)","termid":"PBO:0059467"}


id: PBO:0050111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 21","termid":"PBO:0050111"}


id: PBO:0066097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 2","termid":"PBO:0066097"}


id: GO:0070211
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone deacetylase complex that is part of the chromatin remodeling machinery. In Saccharomyces cerevisiae this complex contains Snt2p, Ecm5p and Rpd3p.","definition_xrefs":["GOC:rb","PMID:19040720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005694","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"Snt2C complex","termid":"GO:0070211"}


id: GO:0106222
data:
  {"annotated_genes":["SJAG_04601","SJAG_00145","SJAG_00701","SJAG_04942","SJAG_02622","SJAG_03193"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94603,96944,106099,113689,117268,119979],"is_not":false,"summary":null,"term":"GO:0106222"}]},"cv_name":"molecular_function","definition":"Binding to a long noncoding RNA (lncRNA).","definition_xrefs":["PMID:25578728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00701":null,"SJAG_02622":null,"SJAG_03193":null,"SJAG_04601":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lncRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long noncoding RNA binding","type":"exact"}],"termid":"GO:0106222","terms_by_termid":{"GO:0106222":null}}


id: GO:0018213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-valine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-valine modification","termid":"GO:0018213"}


id: SO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a ribosomal RNA (rRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_encoding","synonyms":[{"name":"rRNA encoding","type":"exact"}],"termid":"SO:0000573"}


id: PBO:0004532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs31 (predicted)","termid":"PBO:0004532"}


id: GO:0016656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 monodehydro-L-ascorbate radical + NADH + H+ = 2 L-ascorbate + NAD+.","definition_xrefs":["RHEA:14581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"monodehydroascorbate reductase (NADH) activity","secondary_identifiers":["MetaCyc:1.6.5.4-RXN","EC:1.6.5.4"],"synonyms":[{"name":"AFR","type":"related"},{"name":"AFR-reductase activity","type":"related"},{"name":"MDAsA reductase (NADPH)","type":"related"},{"name":"MDHA","type":"related"},{"name":"NADH-semidehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:AFR oxidoreductase activity","type":"related"},{"name":"NADH:ascorbate radical oxidoreductase activity","type":"related"},{"name":"NADH:monodehydroascorbate oxidoreductase activity","type":"related"},{"name":"NADH:semidehydroascorbic acid oxidoreductase activity","type":"related"},{"name":"SDA reductase activity","type":"related"},{"name":"ascorbate free radical reductase activity","type":"related"},{"name":"ascorbate free-radical reductase activity","type":"related"},{"name":"ascorbic free radical reductase activity","type":"related"},{"name":"monodehydroascorbate reductase activity","type":"exact"},{"name":"semidehydroascorbate reductase activity","type":"related"}],"termid":"GO:0016656"}


id: PBO:0052969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-L-3-hydroxyproline dehydratase","termid":"PBO:0052969"}


id: PBO:0001264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L30 (predicted)","termid":"PBO:0001264"}


id: GO:0016633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactono-1,4-lactone + 2 ferricytochrome c = L-ascorbate + 2 ferrocytochrome c.","definition_xrefs":["EC:1.3.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, cytochrome as acceptor","termid":"GO:0016632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactonolactone dehydrogenase activity","secondary_identifiers":["RHEA:32367","MetaCyc:GALACTONOLACTONE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"GLDHase activity","type":"related"},{"name":"GLDase activity","type":"related"},{"name":"L-galactono-1,4-lactone dehydrogenase activity","type":"exact"},{"name":"L-galactono-1,4-lactone:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"L-galactono-gamma-lactone dehydrogenase activity","type":"related"},{"name":"L-galactono-gamma-lactone:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"L-galactonolactone dehydrogenase activity","type":"related"}],"termid":"GO:0016633"}


id: GO:0004783
data:
  {"annotated_genes":["SJAG_05027","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71858,80020],"is_not":false,"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 NADP+ + 3 H2O = sulfite + 3 NADPH + 3 H+.","definition_xrefs":["RHEA:13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite reductase activity","termid":"GO:0016002"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfite reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SULFITE-REDUCT-RXN","EC:1.8.1.2"],"synonyms":[{"name":"H2S-NADP oxidoreductase activity","type":"related"},{"name":"NADPH-dependent sulfite reductase activity","type":"related"},{"name":"NADPH-sulfite reductase activity","type":"related"},{"name":"NADPH:sulfite reductase flavoprotein","type":"related"},{"name":"hydrogen-sulfide:NADP+ oxidoreductase activity","type":"related"},{"name":"sulfite (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"sulphite reductase (NADPH) activity","type":"exact"}],"termid":"GO:0004783","terms_by_termid":{"GO:0004783":null}}


id: MONDO:0017220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 0 is a congenital respiratory tract anomaly characterized by a submucosal laryngo-tracheo-esophageal cleft with minor symptoms or an asymptomatic course.","definition_xrefs":["Orphanet:280205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 0","secondary_identifiers":["GARD:21072","UMLS:C5438977","MEDGEN:1760178"],"synonyms":[{"name":"LTEC0","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 0","type":"exact"}],"termid":"MONDO:0017220","xrefs":{"Monarch":{"xref_id":"0017220"}}}


id: PBO:0061725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACHT and WD repeat domain containing 1","termid":"PBO:0061725"}


id: PBO:0076148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDS3 homolog, SIN3A corepressor complex component","termid":"PBO:0076148"}


id: PBO:0079463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog C","termid":"PBO:0079463"}


id: PBO:0046869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focally amplified long non-coding RNA in epithelial cancer","termid":"PBO:0046869"}


id: PBO:0058554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6133","termid":"PBO:0058554"}


id: PBO:0049355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 13","termid":"PBO:0049355"}


id: GO:0010823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a mitochondrion.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitochondrion organization (obsolete GO:0010823)","synonyms":[{"name":"negative regulation of mitochondrion organisation","type":"exact"}],"termid":"GO:0010823"}


id: MONDO:0015277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine carcinoma arising from the C-cells of the thyroid gland. It is closely associated with multiple endocrine neoplasia syndromes. Approximately 10% to 20% of medullary thyroid carcinomas are familial. Patients usually present with a thyroid nodule that is painless and firm. In the majority of cases nodal involvement is present at diagnosis. Surgery is the preferred treatment for both primary lesions and recurrences. This carcinoma is generally not very sensitive to radiation and almost unresponsive to chemotherapy.","definition_xrefs":["NCIT:C3879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"medullary thyroid gland carcinoma","secondary_identifiers":["HP:0002865","ONCOTREE:THME","GARD:7004","MEDGEN:66772","UMLS:C0238462","icd11.foundation:578519098","NANDO:2201054","DOID:3973","MedDRA:10027101","Orphanet:1332","SCTID:255032005"],"synonyms":[{"name":"C cell carcinoma","type":"exact"},{"name":"MTC","type":"exact"},{"name":"THME","type":"related"},{"name":"carcinoma of parafollicular cell","type":"exact"},{"name":"carcinoma, C-cell, malignant","type":"exact"},{"name":"medullary carcinoma","type":"exact"},{"name":"medullary carcinoma of the thyroid","type":"exact"},{"name":"medullary carcinoma of the thyroid gland","type":"exact"},{"name":"medullary carcinoma of thyroid","type":"exact"},{"name":"medullary carcinoma of thyroid gland","type":"exact"},{"name":"medullary thyroid cancer","type":"exact"},{"name":"medullary thyroid cancer (MTC)","type":"related"},{"name":"medullary thyroid carcinoma","type":"exact"},{"name":"medullary thyroid gland carcinoma","type":"exact"},{"name":"parafollicular cell carcinoma","type":"exact"},{"name":"thyroid cancer, medullary","type":"related"},{"name":"thyroid carcinoma, medullary","type":"related"},{"name":"thyroid gland medullary cancer","type":"exact"},{"name":"thyroid gland medullary carcinoma","type":"exact"},{"name":"thyroid gland neuroendocrine carcinoma","type":"exact"},{"name":"thyroid medullary carcinoma","type":"exact"},{"name":"ultimobranchial thyroid tumor","type":"exact"},{"name":"ultimobranchial thyroid tumour","type":"exact"}],"termid":"MONDO:0015277","xrefs":{"Monarch":{"xref_id":"0015277"}}}


id: GO:0033597
data:
  {"annotated_genes":["SJAG_01330","SJAG_04699","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70383,101923,117397],"is_not":false,"summary":null,"term":"GO:0033597"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that functions as a mitotic checkpoint inhibitor of the anaphase-promoting complex/cyclosome (APC/C). In budding yeast this complex consists of Mad2p, Mad3p, Bub3p and Cdc20p, and in mammalian cells it consists of MAD2, BUBR1, BUB3, and CDC20.","definition_xrefs":["PMID:11726501","PMID:17650307","PMID:11535616","PMID:10704439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_01330":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"mitotic checkpoint complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"MCC","type":"exact"}],"termid":"GO:0033597","terms_by_termid":{"GO:0033597":null}}


id: MONDO:0030329
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88080],"is_not":false,"summary":null,"term":"MONDO:0030329"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543636","OMIM:619431","MEDGEN:1782906"],"synonyms":[{"name":"MMIHS5","type":"exact"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 5","type":"exact"}],"termid":"MONDO:0030329","terms_by_termid":{"MONDO:0030329":null},"xrefs":{"Monarch":{"xref_id":"0030329"}}}


id: GO:0097258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 20-hydroxy-leukotriene B4 + O2 + reduced [NADPH-hemoprotein reductase] = 20-oxo-leukotriene B4 + H+ + 2 H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:9675028","RHEA:48668","PMID:2836406","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"20-hydroxy-leukotriene B4 omega oxidase activity","secondary_identifiers":["Reactome:R-HSA-2161745"],"synonyms":[{"name":"20-hydroxy-leukotriene B4 omega-oxidase activity","type":"exact"},{"name":"20-hydroxy-leukotriene B4 omega-oxidation","type":"related"}],"termid":"GO:0097258"}


id: FYPO:0000481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic recombination is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic recombination","synonyms":[{"name":"abnormal mitotic recombination during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: abnormal","type":"related"}],"termid":"FYPO:0000481"}


id: MONDO:0015576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare viral disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare viral disease (obsolete MONDO:0015576)","secondary_identifiers":["Orphanet:163585"],"synonyms":[{"name":"rare viral disease","type":"exact"},{"name":"rare viral infectious disease","type":"exact"}],"termid":"MONDO:0015576","xrefs":{"Monarch":{"xref_id":"0015576"}}}


id: PBO:0039108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHNAK nucleoprotein","termid":"PBO:0039108"}


id: GO:0106039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process carried out at the cellular level, which is the final step in vesicle assembly. Vesicle fusion occurs when a newly assembled vesicle closes up, following vesicle vesicle scission (GO:0099050).","definition_xrefs":["PMID:25898166","GOC:aruk","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle fusion involved in vesicle assembly (obsolete GO:0106039)","termid":"GO:0106039"}


id: PBO:0079478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXK tyrosine kinase","termid":"PBO:0079478"}


id: PBO:0038964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin 5 (putative)","termid":"PBO:0038964"}


id: MONDO:0019630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital ectropion uveae is a rare, genetic, non-syndromic developmental defect of the eye characterized by the presence of iris pigment epithelium on the anterior surface of the iris, anterior insertion of the iris, angle dysgenesis and progressive open-angle glaucoma (the latter may present in infancy or may develop later in life). Patients may manifest with headaches, ocular pain, photophobia, and redness, watering and/or swelling of the eye. It can often be associated with neurofibromatosis and less commonly with other ocular abnormalities.","definition_xrefs":["Orphanet:91491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital ectropion uveae","secondary_identifiers":["MEDGEN:724517","ICD10CM:Q10.1","UMLS:C1303012","GARD:19169"],"termid":"MONDO:0019630","xrefs":{"Monarch":{"xref_id":"0019630"}}}


id: PBO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polysaccharide_level","termid":"PBO:0031149"}


id: GO:0047797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + cyclohexanone = AH(2) + cyclohex-2-enone.","definition_xrefs":["RHEA:21780","EC:1.3.99.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cyclohexanone dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02234","MetaCyc:CYCLOHEXANONE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"cyclohexanone:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"cyclohexanone:acceptor 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047797"}


id: PBO:0003622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RINT1 family protein (predicted)","termid":"PBO:0003622"}


id: MONDO:0044276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 11 (obsolete MONDO:0044276)","secondary_identifiers":["OMIM:612271"],"synonyms":[{"name":"Melanesian blond hair","type":"related"},{"name":"SHEP11","type":"related"},{"name":"skin/hair/eye pigmentation 11, blue/Nonblue eyes","type":"related"},{"name":"skin/hair/eye pigmentation, variation IN, 11","type":"related"},{"name":"skin/hair/eye pigmentation, variation in, 11 (melanesian blond hair)","type":"exact"}],"termid":"MONDO:0044276","xrefs":{"Monarch":{"xref_id":"0044276"}}}


id: MOD:01666
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with epicocconone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epicocconone derivatized residue","synonyms":[{"name":"(6S,9aS)-6-(hydroxymethyl)-3-[(1Z,4E,6E,8E)-1-hydroxy-3-oxodeca-1,4,6,8-tetraen-1-yl]-9a-methyl-5,6-dihydro-2H-furo[3,2-g]isochromene-2,9(9aH)-dione","type":"exact"},{"name":"Deep Purple","type":"exact"},{"name":"LavaPurple","type":"exact"},{"name":"Lightning Fast","type":"exact"}],"termid":"MOD:01666"}


id: GO:0009442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways by which allantoin is processed and converted to ureidoglycolate, and then into metabolically useful substrates. E. coli are able to utilize allantoin as a sole nitrogen source under anaerobic conditions by converting it to ureidoglycolate; this may be further metabolized to produce glyoxylate and thence 3-phosphoglycerate, or alternatively oxidized to oxolureate, which can converted into oxamate and carbamoylphosphate. This may then be further metabolized to CO2, NH4+ and ATP.","definition_xrefs":["MetaCyc:PWY0-41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin catabolic process","termid":"GO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin assimilation pathway","synonyms":[{"name":"allantoin catabolic process via ureidoglycolate","type":"exact"},{"name":"allantoin catabolism via ureidoglycolate","type":"exact"},{"name":"allantoin degradation pathway","type":"related"}],"termid":"GO:0009442"}


id: FYPO:0002178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which cells in the population are viable, and some cells are longer than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete viable mixed population including long cells (obsolete FYPO:0002178)","synonyms":[{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0002178"}


id: GO:0090073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein homodimerization activity (obsolete GO:0090073)","termid":"GO:0090073"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: MONDO:1011365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urinary system disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary system disorder, non-human animal","termid":"MONDO:1011365","xrefs":{"Monarch":{"xref_id":"1011365"}}}


id: PBO:0069968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1263, pseudogene","termid":"PBO:0069968"}


id: GO:0098770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the FBXO protein family. Members of this family have an F-box protein motif of approximately 50 amino acids that functions as a site of protein-protein interaction.","definition_xrefs":["PMID:11178263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"FBXO family protein binding","termid":"GO:0098770"}


id: MONDO:1012307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous papillomatosis, non-human animal","termid":"MONDO:1011741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous papillomatosis, cattle","secondary_identifiers":["OMIA:001147-9913"],"termid":"MONDO:1012307","xrefs":{"Monarch":{"xref_id":"1012307"}}}


id: GO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + taurine = AH(2) + NH4 + sulfoacetaldehyde.","definition_xrefs":["PMID:15073291","RHEA:18709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"taurine dehydrogenase activity","secondary_identifiers":["MetaCyc:TAURINE-DEHYDROGENASE-RXN","EC:1.4.99.2","KEGG_REACTION:R07167"],"synonyms":[{"name":"taurine:(acceptor) oxidoreductase (deaminating)","type":"related"},{"name":"taurine:acceptor oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050323"}


id: PBO:0067807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 109","termid":"PBO:0067807"}


id: MONDO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"Huntington disease-like syndrome","termid":"MONDO:0015548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"childhood-onset benign chorea with striatal involvement","secondary_identifiers":["GARD:17906","Orphanet:494541","UMLS:C5567463","MEDGEN:1798886"],"termid":"MONDO:0044332","xrefs":{"Monarch":{"xref_id":"0044332"}}}


id: PBO:0087438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit f of the F0 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0087438"}


id: PBO:0054115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1480","termid":"PBO:0054115"}


id: SO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendant of the coding portion of a coding transcript, part of a pseudogene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_region","termid":"SO:0000462"},{"relation_name":"part_of","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_CDS","synonyms":[{"name":"INSDC_feature:CDS","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic CDS","type":"exact"}],"termid":"SO:0002087"}


id: PBO:0030024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shmoo_formation_in_absence_of_opposite_mating_type","termid":"PBO:0030024"}


id: PBO:0030123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-canavanine","termid":"PBO:0030123"}


id: PBO:0089992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22","termid":"PBO:0089992"}


id: MONDO:0013437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PDE6A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"PDE6A-related retinopathy","termid":"MONDO:0700224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 43","secondary_identifiers":["UMLS:C3151139","MEDGEN:462489","GARD:15716","OMIM:613810","ICD10CM:H35.5","DOID:0110379"],"synonyms":[{"name":"PDE6A retinitis pigmentosa","type":"exact"},{"name":"RP43","type":"exact"},{"name":"retinitis pigmentosa 43","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PDE6A","type":"exact"},{"name":"retinitis pigmentosa type 43","type":"exact"}],"termid":"MONDO:0013437","xrefs":{"Monarch":{"xref_id":"0013437"}}}


id: PBO:0015249
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with non-coding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015249"}


id: PBO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 3","termid":"PBO:0046677"}


id: MONDO:0018441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatitis delta (obsolete MONDO:0018441)","termid":"MONDO:0018441","xrefs":{"Monarch":{"xref_id":"0018441"}}}


id: GO:0047690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-asparagine + H+ + hydroxylamine = beta-L-aspartylhydroxamate + NH4.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartyltransferase activity (obsolete GO:0047690)","synonyms":[{"name":"L-asparagine:hydroxylamine gamma-aspartyltransferase activity","type":"related"},{"name":"aspartotransferase activity","type":"related"},{"name":"beta-aspartyl transferase activity","type":"related"}],"termid":"GO:0047690"}


id: GO:0052636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an arabinosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"arabinosyltransferase activity","synonyms":[{"name":"arabinosyl transferase activity","type":"exact"}],"termid":"GO:0052636"}


id: PBO:0029283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0029283"}


id: GO:1900421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"positively_regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of alcohol catabolic process","synonyms":[{"name":"activation of cellular alcohol catabolic process","type":"narrow"},{"name":"up regulation of cellular alcohol catabolic process","type":"exact"},{"name":"up-regulation of cellular alcohol catabolic process","type":"exact"},{"name":"upregulation of cellular alcohol catabolic process","type":"exact"}],"termid":"GO:1900421"}


id: GO:0097655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the serpin protein family (serine protease inhibitors or classified inhibitor family I4). Serpins are a broadly distributed family of protease inhibitors that use a conformational change to inhibit target enzymes. They are central in controlling many important proteolytic cascades. The majority of serpins inhibit serine proteases, but serpins that inhibit caspases and papain-like cysteine proteases have also been identified. Rarely, serpins perform a non-inhibitory function; for example, several human serpins function as hormone transporters and certain serpins function as molecular chaperones or tumor suppressors.","definition_xrefs":["PMID:16737556","GOC:mr","InterPro:IPR000215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"serpin family protein binding","termid":"GO:0097655"}


id: GO:0005576
data:
  {"annotated_genes":["SJAG_02131","SJAG_04864","SJAG_03444","SJAG_00667","SJAG_03824","SJAG_01835","SJAG_03295","SJAG_04067","SJAG_02580","SJAG_02091","SJAG_00781","SJAG_02093","SJAG_00620","SJAG_01171","SJAG_00181","SJAG_04327","SJAG_05001","SJAG_00975","SJAG_02192","SJAG_04073","SJAG_02959","SJAG_00981","SJAG_01970","SJAG_02478","SJAG_02949","SJAG_04301","SJAG_02582"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61241,72268,74325,76785,78746,79599,79863,89205,89967,90460,90862,92314,93662,101935,102134,102601,103391,103392,104247,109586,115172,115173,115543,115544,117427,117467,117961],"is_not":false,"summary":null,"term":"GO:0005576"}]},"cv_name":"cellular_component","definition":"The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00620":null,"SJAG_00667":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00981":null,"SJAG_01171":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02192":null,"SJAG_02478":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02949":null,"SJAG_02959":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03824":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04301":null,"SJAG_04327":null,"SJAG_04864":null,"SJAG_05001":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Extracellular"],"synonyms":[{"name":"extracellular","type":"exact"}],"termid":"GO:0005576","terms_by_termid":{"GO:0005576":null}}


id: SO:1000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome which is a copy of another chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"free","termid":"SO:0001516"},{"relation_name":"is_a","term_name":"ring_chromosome","termid":"SO:1000045"},{"relation_name":"is_a","term_name":"free_duplication","termid":"SO:1000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free_ring_duplication","synonyms":[{"name":"(Drosophila)R","type":"related"},{"name":"free ring duplication","type":"exact"}],"termid":"SO:1000145"}


id: GO:0090008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypoblast over time, from its formation to the mature structure. The hypoblast is a tissue formed from the inner cell mass that lies beneath the epiblast.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoblast development","termid":"GO:0090008"}


id: PBO:0071395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 1","termid":"PBO:0071395"}


id: GO:0018892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclohexylsulfamate, also known as cyclamic acid. Sodium cyclohexylsulfamate (CHS-Na) was a widely used sweetening agent but was banned because of the suspicion of carcinogenicity and metabolic conversion to cyclohexylamine (CHA), a toxic substance. It is now used as a fungicide.","definition_xrefs":["UM-BBD_pathwayID:chs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"cyclohexylsulfamate metabolic process","synonyms":[{"name":"cyclohexylsulfamate metabolism","type":"exact"},{"name":"cyclohexylsulphamate metabolic process","type":"exact"},{"name":"cyclohexylsulphamate metabolism","type":"exact"}],"termid":"GO:0018892"}


id: FYPO:0005612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nuclear envelope is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus","termid":"FYPO:0006553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nuclear envelope","synonyms":[{"name":"normal protein localisation to nuclear envelope","type":"exact"}],"termid":"FYPO:0005612"}


id: PBO:0074641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 33","termid":"PBO:0074641"}


id: PBO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med27","termid":"PBO:0018255"}


id: PBO:0071874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 12","termid":"PBO:0071874"}


id: FYPO:0007939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any chromatin loop formation is normal (i.e. indistinguishable from wild type) during  the meiotic prophase I.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during meiotic cell cycle","termid":"FYPO:0007941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal chromatin loop formation during meiotic prophase I","synonyms":[{"name":"normal chromatin looping during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007939"}


id: GO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism stops, prevents, or reduces the frequency, rate or extent of translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host translation (obsolete GO:0044074)","synonyms":[{"name":"negative regulation of host translation by symbiont","type":"exact"}],"termid":"GO:0044074"}


id: GO:0045895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mating-type specific process that activates or increases the rate of cellular DNA-templated transcription.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating-type specific transcription, DNA-templated","termid":"GO:0007532"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mating-type specific transcription, DNA-templated","synonyms":[{"name":"activation of transcription, mating-type specific","type":"narrow"},{"name":"positive regulation of mating-type specific transcription, DNA-dependent","type":"exact"},{"name":"stimulation of transcription, mating-type specific","type":"narrow"},{"name":"up regulation of transcription, mating-type specific","type":"exact"},{"name":"up-regulation of transcription, mating-type specific","type":"exact"},{"name":"upregulation of transcription, mating-type specific","type":"exact"}],"termid":"GO:0045895"}


id: PBO:0063122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 6","termid":"PBO:0063122"}


id: GO:0016360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a sensory organ precursor cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination involved in pattern specification","termid":"GO:0060582"},{"relation_name":"part_of","term_name":"sensory organ boundary specification","termid":"GO:0008052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ precursor cell fate determination","synonyms":[{"name":"sense organ precursor cell fate determination","type":"exact"}],"termid":"GO:0016360"}


id: RO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"host_of","termid":"RO:0002453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","termid":"RO:0002557"}


id: GO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of membrane attack complex","termid":"GO:0001969"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activation of membrane attack complex","synonyms":[{"name":"down regulation of activation of membrane attack complex","type":"exact"},{"name":"down-regulation of activation of membrane attack complex","type":"exact"},{"name":"downregulation of activation of membrane attack complex","type":"exact"},{"name":"inhibition of activation of membrane attack complex","type":"narrow"},{"name":"negative regulation of MAC assembly","type":"exact"},{"name":"negative regulation of MAC formation","type":"exact"},{"name":"negative regulation of activation of MAC","type":"exact"},{"name":"negative regulation of activation of TCC","type":"narrow"},{"name":"negative regulation of activation of terminal complement complex","type":"narrow"},{"name":"negative regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"negative regulation of membrane attack complex assembly","type":"exact"},{"name":"negative regulation of membrane attack complex formation","type":"exact"}],"termid":"GO:0001971"}


id: MONDO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disuse amblyopia","secondary_identifiers":["DOID:10378","MEDGEN:508918","ICD10CM:H53.01","UMLS:C0152189","ICD9:368.02","SCTID:193638002"],"synonyms":[{"name":"deprivation amblyopia","type":"exact"}],"termid":"MONDO:0001022","xrefs":{"Monarch":{"xref_id":"0001022"}}}


id: PBO:0074678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 62","termid":"PBO:0074678"}


id: PBO:0087260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0087260"}


id: MONDO:0013257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leprosy","termid":"MONDO:0005124"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 6","secondary_identifiers":["UMLS:C3150676","MEDGEN:462026","OMIM:613407"],"synonyms":[{"name":"LPRS6","type":"exact"},{"name":"leprosy, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0013257","xrefs":{"Monarch":{"xref_id":"0013257"}}}


id: MONDO:0958129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"},{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0006025","MONDO:0005244","MONDO:0004069"],"is_obsolete":false,"name":"COQ7-related distal hereditary motor neuropathy","secondary_identifiers":["MEDGEN:1863922","Orphanet:658778","UMLS:C5925143"],"termid":"MONDO:0958129","xrefs":{"Monarch":{"xref_id":"0958129"}}}


id: PBO:0036369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot13 (predicted)","termid":"PBO:0036369"}


id: PBO:0028084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_density","termid":"PBO:0028084"}


id: PBO:0003658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A variant H2A.Z, Pht1","termid":"PBO:0003658"}


id: PBO:0027324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_normal_numbers","termid":"PBO:0027324"}


id: PR:O14093
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01639","PRO:DNx","PANTHER:PTHR12965:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.10","secondary_identifiers":["UniProtKB:O14093"],"synonyms":[{"name":"Spom972h-VPS54","type":"exact"}],"termid":"PR:O14093"}


id: PBO:0028610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_urease_activity","termid":"PBO:0028610"}


id: PBO:0072681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 2","termid":"PBO:0072681"}


id: GO:0033280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin D","synonyms":[{"name":"response to calciferol","type":"exact"},{"name":"response to cholecalciferol","type":"narrow"},{"name":"response to ergocalciferol","type":"narrow"}],"termid":"GO:0033280"}


id: PBO:0088408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway ATPase Sec18","termid":"PBO:0088408"}


id: PBO:0006326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Efg1 (predicted)","termid":"PBO:0006326"}


id: GO:0018809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: E-phenylitaconyl-CoA + H2O = (hydroxymethylphenyl)succinyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete E-phenylitaconyl-CoA hydratase activity (obsolete GO:0018809)","termid":"GO:0018809"}


id: GO:1900756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein processing that takes place in the phagosome. Most protein processing in the phagosome represents protein degradation.","definition_xrefs":["GOC:rjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"protein processing in phagocytic vesicle","synonyms":[{"name":"peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"peptidolysis during protein maturation in phagosome","type":"related"},{"name":"protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"protein maturation by proteolysis in phagosome","type":"related"},{"name":"protein processing in phagosome","type":"exact"}],"termid":"GO:1900756"}


id: PBO:0076168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 4","termid":"PBO:0076168"}


id: MONDO:0014076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of RTEL1 on chromosome 20q13.33.","definition_xrefs":["DOID:0070020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"dyskeratosis congenita and related telomere biology disorder","termid":"MONDO:0800467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 5","secondary_identifiers":["NCIT:C176928","GARD:15917","UMLS:C3554656","OMIM:615190","MEDGEN:767570","DOID:0070022"],"synonyms":[{"name":"DKCB5","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita 5","type":"related"},{"name":"dyskeratosis congenita, autosomal dominant 4","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 5","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 5","type":"exact"}],"termid":"MONDO:0014076","xrefs":{"Monarch":{"xref_id":"0014076"}}}


id: PBO:0029257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029257"}


id: PBO:0029226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homologous_chromosome_pairing","termid":"PBO:0029226"}


id: PBO:0090169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein involved in ascospore wall assembly, GPI anchored Meu10","termid":"PBO:0090169"}


id: PBO:0041608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 39","termid":"PBO:0041608"}


id: GO:0098575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the lumen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"lumenal side of lysosomal membrane","synonyms":[{"name":"internal leaflet of lysosomal membrane","type":"exact"},{"name":"internal side of lysosomal membrane","type":"exact"}],"termid":"GO:0098575"}


id: MONDO:0005716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pleuropneumonia of cattle and goats caused by species of mycoplasma.","definition_xrefs":["MESH:D011002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contagious pleuropneumonia","secondary_identifiers":["EFO:0007221","MEDGEN:19357","UMLS:C0032243"],"termid":"MONDO:0005716","xrefs":{"Monarch":{"xref_id":"0005716"}}}


id: GO:0044730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bone sialoprotein, an extracellular matrix glycoprotein found on the surface of bones and dentin.","definition_xrefs":["PMID:10642520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"bone sialoprotein binding","secondary_identifiers":["InterPro:IPR008412"],"synonyms":[{"name":"bone sialoprotein II binding","type":"exact"}],"termid":"GO:0044730"}


id: FYPO:0003317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased, and the protein is also detected distributed throughout the plasma membrane and/or cell cortex.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to growing cell tip","termid":"FYPO:0002871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex","synonyms":[{"name":"decreased protein localisation to growing cell tip, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell end, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell tip, with protein distributed in cell cortex","type":"narrow"},{"name":"decreased protein localization to growing cell tip, with protein distributed in cell membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane","type":"narrow"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip, with protein distributed in plasma membrane or cortex","type":"exact"}],"termid":"FYPO:0003317"}


id: GO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + D-glutamine = gamma-D-glutamyl-D-glutamate + NH4+. Can also transfer additional glutamyl residues to a peptide, extending the polypeptide chain.","definition_xrefs":["EC:2.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"D-glutamyltransferase activity","secondary_identifiers":["RHEA:35623","MetaCyc:D-GLUTAMYLTRANSFERASE-RXN"],"synonyms":[{"name":"D-gamma-glutamyl transpeptidase activity","type":"related"},{"name":"D-glutamyl transpeptidase activity","type":"related"},{"name":"glutamine:D-glutamyl-peptide 5-glutamyltransferase activity","type":"related"}],"termid":"GO:0047823"}


id: MONDO:0008514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly type 3 (SD3) is a rare congenital distal limb malformation characterized by complete and bilateral syndactyly between the 4th and 5th fingers.","definition_xrefs":["Orphanet:93404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly type 3","secondary_identifiers":["MESH:C538154","DOID:0111817","GARD:5088","icd11.foundation:144846004","MEDGEN:396117","SCTID:715725001","UMLS:C1861366","OMIM:186100"],"synonyms":[{"name":"GJA1 non-syndromic syndactyly","type":"exact"},{"name":"Ring and Little finger syndactyly","type":"related"},{"name":"SD3","type":"exact"},{"name":"Sdty3","type":"related"},{"name":"non-syndromic syndactyly caused by mutation in GJA1","type":"exact"},{"name":"syndactyly of fingers 4 and 5","type":"exact"},{"name":"syndactyly of fingers four and five","type":"related"},{"name":"syndactyly of the ring and little finger","type":"related"},{"name":"syndactyly, type 3","type":"related"},{"name":"syndactyly, type III","type":"related"}],"termid":"MONDO:0008514","xrefs":{"Monarch":{"xref_id":"0008514"}}}


id: GO:0071376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticotropin-releasing hormone stimulus. Corticotropin-releasing hormone is a peptide hormone involved in the stress response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to corticotropin-releasing hormone","termid":"GO:0043435"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to corticotropin-releasing hormone stimulus","synonyms":[{"name":"cellular response to CRF stimulus","type":"exact"},{"name":"cellular response to CRH stimulus","type":"exact"},{"name":"cellular response to corticoliberin stimulus","type":"exact"},{"name":"cellular response to corticotropin-releasing factor stimulus","type":"exact"}],"termid":"GO:0071376"}


id: MONDO:0008306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cerebral amyloid angiopathy characterized by onset in the 4th to 6th decade of life, progressive mental deterioration, spasticity, muscular rigidity but no tremors, spontaneous movements or sensory changes that has material basis in an autosomal dominant mutation of ITM2B on chromosome 13q14.2.","definition_xrefs":["DOID:0070029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy","termid":"MONDO:0005620"},{"relation_name":"is_a","term_name":"ITM2B amyloidosis","termid":"MONDO:0018591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179","MONDO:0005559"],"is_obsolete":false,"name":"ABri amyloidosis","secondary_identifiers":["MESH:C538208","GARD:8344","icd11.foundation:1037669378","ICD10EXP:E85.4+","UMLS:C5190835","Orphanet:97345","MEDGEN:1677186","ICD10EXP:I68.0*","OMIM:176500"],"synonyms":[{"name":"ABri amyloidosis","type":"exact"},{"name":"Bri amyloidosis","type":"related"},{"name":"FBD","type":"exact"},{"name":"ITM2B-related cerebral amyloid angiopathy 1","type":"related"},{"name":"cerebral amyloid angiopathy, British type","type":"exact"},{"name":"cerebral amyloid angiopathy, ITM2B-RELATED, 1","type":"related"},{"name":"cerebral amyloid angiopathy, ITM2B-related, type 1","type":"exact"},{"name":"dementia familial British","type":"related"},{"name":"dementia, familial British","type":"related"},{"name":"familial British dementia","type":"exact"},{"name":"familial dementia, British type","type":"exact"},{"name":"presenile dementia with spastic ataxia","type":"exact"}],"termid":"MONDO:0008306","xrefs":{"Monarch":{"xref_id":"0008306"}}}


id: SO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is mono- methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_monomethylation_site","synonyms":[{"name":"H3K79 mono-methylation site","type":"exact"},{"name":"H3K79me1","type":"related"}],"termid":"SO:0001710"}


id: PBO:0016113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin involved in G1","termid":"PBO:0016113"}


id: GO:0031025
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104120],"is_not":false,"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"The process in which the equatorial microtubule organizing center is disassembled at the end of mitosis.","definition_xrefs":["GOC:mah","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"equatorial microtubule organization","termid":"GO:0031121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"equatorial microtubule organizing center disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organising center disassembly","type":"exact"}],"termid":"GO:0031025","terms_by_termid":{"GO:0031025":null}}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: GO:0035809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urine volume","synonyms":[{"name":"regulation of urinary volume","type":"exact"},{"name":"regulation of urine flow","type":"exact"}],"termid":"GO:0035809"}


id: FYPO:0000338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the position or morphology of the mitotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle","termid":"FYPO:0000120"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0000120","FYPO:0000002","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal mitotic spindle","secondary_identifiers":["FYPO:0000277"],"synonyms":[{"name":"abnormal mitotic spindle during vegetative growth","type":"exact"},{"name":"abnormal spindle during mitotic cell cycle","type":"related"},{"name":"mitotic spindle defects","type":"exact"},{"name":"spindle polarity defects","type":"related"}],"termid":"FYPO:0000338"}


id: MOD:00831
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.","definition_xrefs":["PubMed:1694179","PubMed:5490222","RESID:AA0151#var","PubMed:111247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"N4-(N-acetylamino)hexosyl-L-asparagine","termid":"MOD:01674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)glucosyl-L-asparagine","synonyms":[{"name":"CARBOHYD N-linked (GlcNAc) asparagine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N4GlcNAcAsn","type":"exact"}],"termid":"MOD:00831"}


id: PBO:0066559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 22","termid":"PBO:0066559"}


id: PATO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female","termid":"PATO:0000383"}


id: MONDO:0024647
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88236,88237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020722"}]},"cv_name":"mondo","definition":"Stone(s) within the urinary tract.","definition_xrefs":["NCIT:C114688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"is_obsolete":false,"name":"urolithiasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:N20-N23","icd11.foundation:1746821938","MEDGEN:141536","DOID:0080653","ICD10CM:N21","MESH:D052878","SCTID:95566004","UMLS:C0451641"],"synonyms":[{"name":"calculus","type":"exact"},{"name":"kidney stone","type":"broad"},{"name":"urinary stones","type":"exact"},{"name":"urolithiasis","type":"exact"}],"termid":"MONDO:0024647","terms_by_termid":{"MONDO:0020722":null},"xrefs":{"Monarch":{"xref_id":"0024647"}}}


id: FYECO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glutamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glutamine","termid":"FYECO:0000085"}


id: PBO:0055861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 8","termid":"PBO:0055861"}


id: GO:0099555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of nitric oxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by nitric oxide, modulating synaptic transmission","termid":"GO:0099555"}


id: PBO:0075446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 1","termid":"PBO:0075446"}


id: PBO:0058939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule interacting and trafficking domain containing 1","termid":"PBO:0058939"}


id: PATO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three angles.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triangular","synonyms":[{"name":"delta shaped","type":"related"},{"name":"deltoid","type":"exact"},{"name":"triangle","type":"related"},{"name":"triangle-shaped","type":"related"}],"termid":"PATO:0001875"}


id: GO:1902357
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:18682385","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopropylmalate transport","termid":"GO:0034659"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"2-isopropylmalate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902357","terms_by_termid":{"GO:1990556":null}}


id: PBO:0057044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133b","termid":"PBO:0057044"}


id: PBO:0089376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec74","termid":"PBO:0089376"}


id: GO:2000870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of progesterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female gonad development","termid":"GO:2000194"},{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"progesterone secretion","termid":"GO:0042701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of progesterone secretion","termid":"GO:2000870"}


id: PATO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in an bearer by virtue of how that bearer interacts with electromagnetic radiation.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electromagnetic_radiation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}


id: PBO:0040752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bradykinin receptor B1","termid":"PBO:0040752"}


id: MONDO:0003076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinoblastoma that only involves a single eye.","definition_xrefs":["NCIT:C8714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"unilateral retinoblastoma","secondary_identifiers":["UMLS:C0854915","DOID:4651","MEDGEN:208929"],"termid":"MONDO:0003076","xrefs":{"Monarch":{"xref_id":"0003076"}}}


id: GO:0016466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in archae.","definition_xrefs":["TC:3.A.2.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating A-type ATPase activity (obsolete GO:0016466)","synonyms":[{"name":"hydrogen-translocating A-type ATPase activity","type":"exact"},{"name":"proton-translocating A-type ATPase activity","type":"exact"}],"termid":"GO:0016466"}


id: FYPO:0002624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that fewer dots are observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased punctate nuclear protein localization","synonyms":[{"name":"decreased punctate nuclear protein localisation","type":"exact"},{"name":"decreased punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"decreased punctate nuclear protein localization during vegetative growth","type":"exact"},{"name":"reduced punctate nuclear protein localization","type":"exact"}],"termid":"FYPO:0002624"}


id: MONDO:0018720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete common cystic lymphatic malformation (obsolete MONDO:0018720)","secondary_identifiers":["Orphanet:458833"],"termid":"MONDO:0018720","xrefs":{"Monarch":{"xref_id":"0018720"}}}


id: GO:1990140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex that catalyses sulfur transfer from the sulfur carrier subunit of molybdopterin synthase to precursor Z to synthesize molybdopterin as part of molybdopterin cofactor (Moco) biosynthesis. In E. coli the subunits are MoaE and MoaD; in human, MOCS2B and MOCS2A. Moco biosynthesis and its constituent molecules are evolutionarily conserved.","definition_xrefs":["GOC:bhm","PMID:11135669","PMID:16669776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"molybdopterin synthase complex","synonyms":[{"name":"MPT synthase complex","type":"exact"},{"name":"molybdopterin cofactor (Moco) biosynthesis sulfurtransferase complex","type":"related"},{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:1990140"}


id: GO:1905051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of base-excision repair.","definition_xrefs":["GOC:ah","GOC:TermGenie","GO_REF:0000058","PMID:18973764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"regulation of base-excision repair","synonyms":[{"name":"regulation of BER","type":"exact"}],"termid":"GO:1905051"}


id: GO:0033367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a secretory granule in a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to secretory granule","termid":"GO:0033366"},{"relation_name":"part_of","term_name":"mast cell secretory granule organization","termid":"GO:0033364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mast cell secretory granule","synonyms":[{"name":"protein localisation in mast cell secretory granule","type":"exact"},{"name":"protein localization in mast cell secretory granule","type":"exact"}],"termid":"GO:0033367"}


id: PBO:0017665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit MrpS12 (predicted)","termid":"PBO:0017665"}


id: PBO:0079779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A complex locus","termid":"PBO:0079779"}


id: GO:0019405
data:
  {"annotated_genes":["SJAG_00237","SJAG_04048","SJAG_04192","SJAG_04320"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[73714,80336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[90375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[74301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alditol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"alditol breakdown","type":"exact"},{"name":"alditol catabolism","type":"exact"},{"name":"alditol degradation","type":"exact"}],"termid":"GO:0019405","terms_by_termid":{"GO:0006062":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: GO:0032000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation","termid":"GO:0031998"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid oxidation","termid":"GO:0046321"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"positively_regulates","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation","synonyms":[{"name":"activation of fatty acid beta-oxidation","type":"narrow"},{"name":"stimulation of fatty acid beta-oxidation","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation","type":"exact"}],"termid":"GO:0032000"}


id: MONDO:0017343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-related tumor","termid":"MONDO:0017342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","secondary_identifiers":["UMLS:C2363744","MEDGEN:797800","GARD:21147","MedDRA:10068349","Orphanet:289644"],"synonyms":[{"name":"EBV-associated lymphoproliferative disorder","type":"exact"}],"termid":"MONDO:0017343","xrefs":{"Monarch":{"xref_id":"0017343"}}}


id: PBO:0048147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 3","termid":"PBO:0048147"}


id: GO:0046237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of phenanthrene, a tricyclic aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene biosynthetic process (obsolete GO:0046237)","synonyms":[{"name":"phenanthrene anabolism","type":"exact"},{"name":"phenanthrene biosynthesis","type":"exact"},{"name":"phenanthrene biosynthetic process","type":"exact"},{"name":"phenanthrene formation","type":"exact"},{"name":"phenanthrene synthesis","type":"exact"}],"termid":"GO:0046237"}


id: MONDO:0007366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any benign neonatal seizures in which the cause of the disease is a mutation in the KCNQ3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neonatal seizures","termid":"MONDO:0016027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial neonatal, 2","secondary_identifiers":["OMIM:121201","UMLS:C1852581","GARD:15054","MEDGEN:377707"],"synonyms":[{"name":"BFNS2","type":"related"},{"name":"KCNQ3 benign neonatal seizures","type":"exact"},{"name":"benign neonatal seizures caused by mutation in KCNQ3","type":"exact"},{"name":"convulsions, benign familial neonatal, 2","type":"related"},{"name":"seizures, benign familial neonatal, 2","type":"exact"},{"name":"seizures, benign familial neonatal, type 2","type":"exact"},{"name":"seizures, benign neonatal, 2","type":"exact"}],"termid":"MONDO:0007366","xrefs":{"Monarch":{"xref_id":"0007366"}}}


id: MONDO:1011936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthritis deformans, non-human animal","secondary_identifiers":["OMIA:000065"],"termid":"MONDO:1011936","xrefs":{"Monarch":{"xref_id":"1011936"}}}


id: GO:0102615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ent-cassa-12,15-diene + NADPH + O2 + H+ = 2alpha-hydroxy-ent-cassadiene + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-cassadiene-C2-hydroxylase activity (obsolete GO:0102615)","termid":"GO:0102615"}


id: GO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the mesoderm.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate commitment","synonyms":[{"name":"mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0001710"}


id: PBO:0077786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II beta","termid":"PBO:0077786"}


id: FYPO:0004975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending behind a moving spindle pole body occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization behind moving spindle pole body","synonyms":[{"name":"decreased microtubule shrinkage behind moving spindle pole body","type":"related"},{"name":"decreased rate of backward-extending microtubule depolymerization","type":"exact"},{"name":"decreased rate of microtubule catastrophe behind moving spindle pole body","type":"related"},{"name":"decreased rate of microtubule depolymerisation behind moving spindle pole body","type":"exact"},{"name":"decreased rate of microtubule depolymerization behind moving SPB","type":"exact"},{"name":"decreased rate of microtubule depolymerization behind moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization behind moving spindle pole body during vegetative growth","type":"exact"},{"name":"increased microtubule stability behind moving spindle pole body","type":"related"},{"name":"increased stability of backwards-extending microtubules","type":"related"},{"name":"reduced rate of microtubule depolymerization behind moving spindle pole body","type":"exact"}],"termid":"FYPO:0004975"}


id: PBO:0027003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_sporulation","termid":"PBO:0027003"}


id: GO:0042265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-asparagine to form peptidyl-hydroxyasparagine.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine hydroxylation (obsolete GO:0042265)","synonyms":[{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"broad"}],"termid":"GO:0042265"}


id: MONDO:1011785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal multi-organ developmental dysplasia, non-human animal","secondary_identifiers":["OMIA:001722"],"termid":"MONDO:1011785","xrefs":{"Monarch":{"xref_id":"1011785"}}}


id: PBO:0091114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Ost4","termid":"PBO:0091114"}


id: PBO:0034550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_6-azauracil","termid":"PBO:0034550"}


id: PBO:0064536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase mitochondrial pseudogene 1","termid":"PBO:0064536"}


id: PBO:0108546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor complex RNA-binding protein Rna15","termid":"PBO:0108546"}


id: GO:1904189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12200142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of transformation of host cell by virus","termid":"GO:1904187"},{"relation_name":"positively_regulates","term_name":"symbiont-mediated transformation of host cell","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transformation of host cell by virus","synonyms":[{"name":"activation of transformation of host cell by virus","type":"narrow"},{"name":"activation of viral transformation","type":"narrow"},{"name":"activation of viral transformation of host cell","type":"narrow"},{"name":"positive regulation of viral transformation","type":"exact"},{"name":"positive regulation of viral transformation of host cell","type":"exact"},{"name":"up regulation of transformation of host cell by virus","type":"exact"},{"name":"up regulation of viral transformation","type":"exact"},{"name":"up regulation of viral transformation of host cell","type":"exact"},{"name":"up-regulation of transformation of host cell by virus","type":"exact"},{"name":"up-regulation of viral transformation","type":"exact"},{"name":"up-regulation of viral transformation of host cell","type":"exact"},{"name":"upregulation of transformation of host cell by virus","type":"exact"},{"name":"upregulation of viral transformation","type":"exact"},{"name":"upregulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904189"}


id: PBO:0087811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetradecameric mitochondrial chaperonin; required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; phosphorylated","termid":"PBO:0087811"}


id: PBO:0052577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 5C","termid":"PBO:0052577"}


id: PBO:0117378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRID1 antisense RNA 2","termid":"PBO:0117378"}


id: PBO:0051385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 2","termid":"PBO:0051385"}


id: PR:Q9UUB4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade7 gene.","definition_xrefs":["UniProtKB:Q9UUB4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole-succinocarboxamide synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.10","synonyms":[{"name":"SAICAR synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade7","type":"exact"}],"termid":"PR:Q9UUB4"}


id: GO:0075045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"regulates","term_name":"formation of haustorium for nutrient acquisition","termid":"GO:0052094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075045"}


id: GO:2001042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of septum digestion after cytokinesis","synonyms":[{"name":"negative regulation of cytokinetic cell separation","type":"exact"}],"termid":"GO:2001042"}


id: PR:Q9UT46
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- moc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein moc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.07c","synonyms":[{"name":"Spom972h-moc3","type":"exact"},{"name":"multicopy suppressor of overexpressed cyr1 protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT46"}


id: PBO:0076466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWIST1 associated long noncoding RNA regulated by androgen receptor","termid":"PBO:0076466"}


id: PBO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling (RGS) domain (predicted)","termid":"PBO:0000635"}


id: PBO:0034192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_xenology_relationship_with","termid":"PBO:0034192"}


id: PR:Q1MTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle control protein 50B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02403","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 89 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.11c","secondary_identifiers":["UniProtKB:Q1MTQ5"],"synonyms":[{"name":"Spom972h-TMEM30B","type":"exact"}],"termid":"PR:Q1MTQ5"}


id: GO:0004749
data:
  {"annotated_genes":["SJAG_03811","SJAG_04970","SJAG_04882"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64357,74104,75552],"is_not":false,"summary":null,"term":"GO:0004749"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP = 5-phospho-alpha-D-ribose 1-diphosphate + AMP + 2 H+.","definition_xrefs":["RHEA:15609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribose phosphate diphosphokinase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-111215","KEGG_REACTION:R01049","EC:2.7.6.1","MetaCyc:PRPPSYN-RXN","Reactome:R-HSA-73580"],"synonyms":[{"name":"5-phosphoribose pyrophosphorylase activity","type":"related"},{"name":"5-phosphoribosyl-1-pyrophosphate synthetase activity","type":"related"},{"name":"5-phosphoribosyl-alpha-1-pyrophosphate synthetase activity","type":"related"},{"name":"ATP:D-ribose-5-phosphate diphosphotransferase activity","type":"related"},{"name":"PP-ribose P synthetase activity","type":"related"},{"name":"PPRibP synthetase activity","type":"related"},{"name":"PRPP synthetase activity","type":"related"},{"name":"phosphoribosyl diphosphate synthetase activity","type":"related"},{"name":"phosphoribosyl pyrophosphate synthetase activity","type":"related"},{"name":"phosphoribosyl-diphosphate synthetase activity","type":"related"},{"name":"phosphoribosylpyrophosphate synthase activity","type":"related"},{"name":"phosphoribosylpyrophosphate synthetase activity","type":"related"},{"name":"pyrophosphoribosylphosphate synthetase activity","type":"related"},{"name":"ribophosphate pyrophosphokinase activity","type":"related"},{"name":"ribose-5-phosphate pyrophosphokinase activity","type":"related"},{"name":"ribose-phosphate diphosphokinase activity","type":"related"},{"name":"ribose-phosphate pyrophosphokinase activity","type":"exact"}],"termid":"GO:0004749","terms_by_termid":{"GO:0004749":null}}


id: PR:O74995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH basal transcription factor complex p47 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.07","secondary_identifiers":["UniProtKB:O74995"],"synonyms":[{"name":"SPCC1682.07","type":"related"},{"name":"SSL1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H2","type":"exact"},{"name":"ssl1","type":"related"},{"name":"suppressor of stem-loop protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74995"}


id: FYPO:0003965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}


id: MONDO:0013345
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88811],"is_not":false,"summary":null,"term":"MONDO:0013345"}]},"cv_name":"mondo","definition":"Any D-2-hydroxyglutaric aciduria in which the cause of the disease is a mutation in the IDH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-2-hydroxyglutaric aciduria","termid":"MONDO:0010924"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"d-2-hydroxyglutaric aciduria 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462259","UMLS:C3150909","GARD:15685","DOID:0111352","OMIM:613657"],"synonyms":[{"name":"D-2-hydroxyglutaric aciduria 2","type":"related"},{"name":"D-2-hydroxyglutaric aciduria caused by mutation in IDH2","type":"exact"},{"name":"D-2-hydroxyglutaric aciduria type 2","type":"exact"},{"name":"D2HGA2","type":"related"},{"name":"IDH2 D-2-hydroxyglutaric aciduria","type":"exact"},{"name":"d-2-hydroxyglutaric aciduria 2","type":"exact"}],"termid":"MONDO:0013345","terms_by_termid":{"MONDO:0013345":null},"xrefs":{"Monarch":{"xref_id":"0013345"}}}


id: PR:Q9Y7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC2H8.02 gene.","definition_xrefs":["UniProtKB:Q9Y7Q9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolite transporter C2H8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC2H8.02","synonyms":[{"name":"Spom972h-SPCC2H8.02","type":"exact"}],"termid":"PR:Q9Y7Q9"}


id: SOFP:feature_property
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A general purpose relation between a biological feature and some value","definition_xrefs":["so:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_property","termid":"SOFP:feature_property"}


id: PBO:0054852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2266","termid":"PBO:0054852"}


id: PBO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase Pho4","termid":"PBO:0003191"}


id: PBO:0114320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, ubiquitin conjugatiing enzyme-like","termid":"PBO:0114320"}


id: PBO:0108981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 5","termid":"PBO:0108981"}


id: PBO:0048411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 1","termid":"PBO:0048411"}


id: GO:0045305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to either promote or inhibit the establishment of competence for transformation.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete regulator of establishment of competence for transformation activity (obsolete GO:0045305)","synonyms":[{"name":"regulator of establishment of competence for transformation activity","type":"exact"}],"termid":"GO:0045305"}


id: PBO:0060794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5","termid":"PBO:0060794"}


id: GO:0047219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + UDP-D-glucose = (-)-menthyl beta-D-glucoside + H+ + UDP.","definition_xrefs":["EC:2.4.1.127","RHEA:11520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"monoterpenol beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.127-RXN","KEGG_REACTION:R02179"],"synonyms":[{"name":"UDP-glucose:(-)-menthol O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:(-)-menthol O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:monoterpenol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-monoterpenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047219"}


id: PBO:0054797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINC02210-CRHR1 readthrough","termid":"PBO:0054797"}


id: PBO:0053120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 10","termid":"PBO:0053120"}


id: GO:1901415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process from glycine and succinyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:1901413"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:0033527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0033013","GO:0006520","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"activation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"narrow"},{"name":"activation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"activation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:1901415"}


id: MONDO:0018534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Squamous cell carcinoma of liver and intrahepatic biliary tract is an extremely rare, primary, malignant liver and biliray tract epithelial tumor originating in the intrahepatic bile duct epithelium histologically characterized by the presence of keratinization and/or intracellular bridges. Patients typically present abdominal pain in the right upper quadrant, jaundice, nausea, vomiting, anorexia, weight loss, fever and/or dyspepsia.","definition_xrefs":["Orphanet:424975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell carcinoma of liver and intrahepatic biliary tract","secondary_identifiers":["UMLS:C4749400","GARD:21789","MEDGEN:1668494"],"synonyms":[{"name":"squamous cell carcinoma of liver and IBT","type":"exact"}],"termid":"MONDO:0018534","xrefs":{"Monarch":{"xref_id":"0018534"}}}


id: MONDO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anonychia congenita (obsolete MONDO:0000388)","synonyms":[{"name":"hyponychia congenita","type":"exact"}],"termid":"MONDO:0000388","xrefs":{"Monarch":{"xref_id":"0000388"}}}


id: MONDO:0100546
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id: PBO:0082130
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin assembly factor; C-terminal WCA domain activates Arp2/3 complex-mediated nucleation of branched actin filaments, polyproline domain nucleates actin filaments independent of Arp2/3; mutants are defective in endocytosis, bud site selection, cytokinesis; human homolog WAS (Wiskott-Aldrich Syndrome) implicated in severe immunodeficiency; human WAS complements yeast null mutant, but only in presence of WIPF1, which mediates localization of WAS to cortical patches","termid":"PBO:0082130"}


id: FYPO:0000986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a higher-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000986)","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"increased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"increased transcriptional response to pheromone","type":"related"},{"name":"sensitive to pheromone","type":"related"}],"termid":"FYPO:0000986"}


id: GO:0016005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme phospholipase A2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"phospholipase A2 activator activity","termid":"GO:0016005"}


id: PBO:0073103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 7","termid":"PBO:0073103"}


id: GO:0032235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel.","definition_xrefs":["PMID:16582901","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium ion transport via store-operated calcium channel activity (obsolete GO:0032235)","synonyms":[{"name":"down regulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"down-regulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"downregulation of calcium ion transport via store-operated calcium channel","type":"exact"},{"name":"inhibition of calcium ion transport via store-operated calcium channel","type":"narrow"},{"name":"negative regulation of calcium ion transport via store-operated calcium channel activity","type":"exact"},{"name":"negative regulation of calcium transport via store-operated calcium channel","type":"exact"},{"name":"negative regulation of store-operated calcium channel activity","type":"exact"}],"termid":"GO:0032235"}


id: PBO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein coding overlap with adjacent gene","termid":"PBO:0001756"}


id: GO:2000233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"negative regulation of ribosome biogenesis","termid":"GO:0090071"},{"relation_name":"is_a","term_name":"regulation of rRNA processing","termid":"GO:2000232"},{"relation_name":"negatively_regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of rRNA processing","synonyms":[{"name":"negative regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000233"}


id: PBO:0087976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase that catalyzes final step in tRNA splicing: the transfer of the 2'-PO(4) from the splice junction to NAD(+) to form ADP-ribose 1''-2''cyclic phosphate and nicotinamide","termid":"PBO:0087976"}


id: PBO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diadenosine 5',5'''-p1,p6-hexaphosphate hydrolase Aps1","termid":"PBO:0000200"}


id: PBO:0064532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit K","termid":"PBO:0064532"}


id: MONDO:0025369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arbovirus infection of sheep and goats transmitted by ticks. It is characterized by high fever and hemorrhagic gastroenteritis.","definition_xrefs":["MESH:D009265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"tick-borne infectious disease, non-human animal","termid":"MONDO:0700201"},{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease, non-human animal","termid":"MONDO:0700202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nairobi sheep disease","secondary_identifiers":["SCTID:24069003"],"synonyms":[{"name":"disease, Nairobi sheep","type":"related"},{"name":"sheep disease, Nairobi","type":"related"}],"termid":"MONDO:0025369","xrefs":{"Monarch":{"xref_id":"0025369"}}}


id: GO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070955"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of bacterium","type":"narrow"}],"termid":"GO:0070956"}


id: GO:0102746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + tetrahydrogeranylgeranyl-PP + NADPH = (E)-3,7,11,15-tetramethylhexadec-2-en-1-yl diphosphate + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrahydrogeranylgeranyl-PP reductase activity (obsolete GO:0102746)","termid":"GO:0102746"}


id: GO:0010428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a methylated cytosine/unspecified/guanine trinucleotide.","definition_xrefs":["PMID:17239600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"methyl-CpNpG binding","termid":"GO:0010428"}


id: PBO:0046431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 1","termid":"PBO:0046431"}


id: GO:0031941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A two-stranded helical polymer of the protein actin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin filament","termid":"GO:0005884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"filamentous actin","secondary_identifiers":["Wikipedia:Actin"],"synonyms":[{"name":"F-actin","type":"exact"}],"termid":"GO:0031941"}


id: PBO:0005662
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Thi1","termid":"PBO:0005662"}


id: MONDO:0006198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary carcinoma of the endometrium characterized by the presence of malignant squamous cells.","definition_xrefs":["NCIT:C8719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial carcinoma","termid":"MONDO:0002447"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial squamous cell carcinoma","secondary_identifiers":["EFO:1000240","MEDGEN:234217","DOID:5533","UMLS:C1333396","icd11.foundation:1130568776"],"synonyms":[{"name":"endometrial squamous cell carcinoma","type":"exact"},{"name":"endometrium squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of endometrium","type":"exact"},{"name":"squamous cell carcinoma of the endometrium","type":"exact"}],"termid":"MONDO:0006198","xrefs":{"Monarch":{"xref_id":"0006198"}}}


id: PBO:0046999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A2, pseudogene","termid":"PBO:0046999"}


id: PBO:0052777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 19","termid":"PBO:0052777"}


id: MONDO:0958303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A renal cell carcinoma with MiT translocations that is characterized by a TFE3 or TFEB-rearranged renal cell carcinoma that occurs during childhood.","definition_xrefs":["DOID:0081416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MIT family translocation renal cell carcinoma","termid":"MONDO:0017886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"childhood renal cell carcinoma with MiT translocations","secondary_identifiers":["MEDGEN:1817233","UMLS:C5708328"],"termid":"MONDO:0958303","xrefs":{"Monarch":{"xref_id":"0958303"}}}


id: PBO:0066011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY RNA binding protein like","termid":"PBO:0066011"}


id: PBO:0051815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 1","termid":"PBO:0051815"}


id: PBO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family","termid":"PBO:0000741"}


id: PBO:0065239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 7","termid":"PBO:0065239"}


id: PBO:0063638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin family member 4","termid":"PBO:0063638"}


id: PBO:0053656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 709","termid":"PBO:0053656"}


id: GO:0033315
data:
  {"annotated_genes":["SJAG_04287","SJAG_02771","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93201,108426,117898],"is_not":false,"summary":null,"term":"GO:0033315"}]},"cv_name":"biological_process","definition":"A signal transduction process that controls the G2/M1 transition of the meiotic cell cycle and prevents the initiation of nuclear division until DNA replication is complete.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication checkpoint signaling","termid":"GO:0000076"},{"relation_name":"is_a","term_name":"meiotic DNA integrity checkpoint signaling","termid":"GO:0044778"},{"relation_name":"is_a","term_name":"negative regulation of G2/MI transition of meiotic cell cycle","termid":"GO:0110031"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic G2/MI DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072440"],"synonyms":[{"name":"meiotic G2/MI DNA replication checkpoint","type":"exact"},{"name":"meiotic cell cycle DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0033315","terms_by_termid":{"GO:0033315":null}}


id: GO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular mesangium over time, from its formation to the mature structure. The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangium development","termid":"GO:0072223"}


id: PBO:0069618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 895, pseudogene","termid":"PBO:0069618"}


id: PBO:0110323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 2 (JR blood group)","termid":"PBO:0110323"}


id: PBO:0012834
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens HRAS","termid":"PBO:0012834"}


id: PBO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus3 (predicted)","termid":"PBO:0002514"}


id: GO:0141184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts an anti-inflammatory cytokine signaling pathway in the host organism by initiating, promoting, or enhancing its activation.","definition_xrefs":["PMID:29924996","PMID:23284742","PMID:27437422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host anti-inflammatory cytokine signaling","termid":"GO:0141184"}


id: PBO:0065094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAG2 antisense RNA 1","termid":"PBO:0065094"}


id: FYPO:0007362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding that bridges two double-stranded DNA regions does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:30626735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000653"],"is_obsolete":false,"name":"abolished double-stranded DNA bridging","synonyms":[{"name":"abolished dsDNA bridging","type":"exact"}],"termid":"FYPO:0007362"}


id: GO:1900778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fumiquinazoline A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A biosynthetic process (obsolete GO:1900778)","synonyms":[{"name":"fumiquinazoline A anabolism","type":"exact"},{"name":"fumiquinazoline A biosynthesis","type":"exact"},{"name":"fumiquinazoline A formation","type":"exact"},{"name":"fumiquinazoline A synthesis","type":"exact"}],"termid":"GO:1900778"}


id: GO:0098815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory postsynaptic potential (EPSP). EPSP is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"}


id: PBO:0014246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1 (predicted)","termid":"PBO:0014246"}


id: GO:1900962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanophenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of methanophenazine metabolic process","termid":"GO:1900965"},{"relation_name":"regulates","term_name":"methanophenazine biosynthetic process","termid":"GO:1900630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanophenazine biosynthetic process","synonyms":[{"name":"regulation of methanophenazine anabolism","type":"exact"},{"name":"regulation of methanophenazine biosynthesis","type":"exact"},{"name":"regulation of methanophenazine formation","type":"exact"},{"name":"regulation of methanophenazine synthesis","type":"exact"}],"termid":"GO:1900962"}


id: MONDO:0018119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with peripheral nerves predominant involvement (obsolete MONDO:0018119)","secondary_identifiers":["Orphanet:352309"],"termid":"MONDO:0018119","xrefs":{"Monarch":{"xref_id":"0018119"}}}


id: PBO:0067799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 101","termid":"PBO:0067799"}


id: FYPO:0005567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase to G1. Cell length is normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell during recovery from quiescence","termid":"FYPO:0005810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0005447","FYPO:0001985","FYPO:0005568","FYPO:0000002"],"is_obsolete":false,"name":"T-shaped cell during G0 to G1 transition","synonyms":[{"name":"T-shaped cell during cell cycle re-entry at G1","type":"exact"},{"name":"T-shaped cell during cell quiescence to G1 transition","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence into G1","type":"exact"},{"name":"T-shaped cell during quiescence to G1 transition","type":"exact"},{"name":"T-shaped cell during recovery from quiescence following G1 arrest","type":"exact"},{"name":"T-shaped cell during recovery from quiescence into G1","type":"exact"},{"name":"cell morphology, T shaped during G0 to G1 transition","type":"exact"}],"termid":"FYPO:0005567"}


id: PBO:0031913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic26/27 (predicted)","termid":"PBO:0031913"}


id: PBO:0091993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane leucine transmembrane transporter Agp3","termid":"PBO:0091993"}


id: MONDO:0024879
data:
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id: PBO:0017863
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id: _global:results_in_acquisition_of_features_of
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id: PBO:0002173
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id: GO:0033045
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id: MONDO:0009861
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id: GO:0019240
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id: PBO:0067718
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id: GO:0010876
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id: PBO:0072739
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id: GO:2001285
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id: GO:1901570
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id: PBO:0082963
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id: MONDO:0009824
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id: MONDO:1011651
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id: PBO:0066751
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id: PBO:0067821
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id: SO:0001003
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id: MOD:00150
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-molybdenum seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl molybdenum heptairon nonasulfide.","definition_xrefs":["PubMed:10525412","PubMed:12215645","PubMed:12733878","PubMed:1529354","RESID:AA0141","PubMed:8027059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"molybdenum containing modified residue","termid":"MOD:00743"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl molybdenum heptairon nonasulfide","synonyms":[{"name":"L-cysteinyl-L-histidino-homocitryl molybdenum heptairon nonasulfide carbide","type":"exact"},{"name":"cysteinato-8kappaS-histidino-1kappaN(tau)-[(2R)-4-carboxy-2-(carboxymethyl)-2-oxidobutanoate-1kappaO(1),1kappaO(2)]-mu6-carbido-2:3:4:5:6:7kappa(6)C-hexa-mu3-sulfido-1:2:3kappa(3)S;1:2:4kappa(3)S;1:3:4kappa(3)S;5:6:8kappa(3)S;5:7:8kappa(3)S;6:7:8kappa(3)S-tri-mu2-sulfido-2:5kappa(2)S;3:6kappa(2)S;4:7kappa(2)S molybdenum heptairon","type":"exact"},{"name":"nitrogenase iron-molybdenum cofactor","type":"exact"}],"termid":"MOD:00150"}


id: PBO:0005453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit (predicted)","termid":"PBO:0005453"}


id: PBO:0090951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha SNAP","termid":"PBO:0090951"}


id: PBO:0056816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 9","termid":"PBO:0056816"}


id: MONDO:0700236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS9 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS9-related ciliopathy","synonyms":[{"name":"BBS9-related ciliopathy","type":"exact"}],"termid":"MONDO:0700236","xrefs":{"Monarch":{"xref_id":"0700236"}}}


id: PBO:0063732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 4","termid":"PBO:0063732"}


id: GO:2000836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of androgen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of androgen secretion","termid":"GO:2000834"},{"relation_name":"positively_regulates","term_name":"androgen secretion","termid":"GO:0035935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of androgen secretion","termid":"GO:2000836"}


id: SO:0001221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone modification.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced","termid":"SO:0000893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_modification","synonyms":[{"name":"silenced by histone modification","type":"exact"}],"termid":"SO:0001221"}


id: GO:0031468
data:
  {"annotated_genes":["SJAG_01745","SJAG_03783","SJAG_03891","SJAG_04489","SJAG_05207","SJAG_00900","SJAG_00416","SJAG_01050","SJAG_01467","SJAG_01242","SJAG_03892"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73796],"is_not":false,"summary":null,"term":"GO:0031468"},{"annotations":[102680,121051,104944,97745,93115,121053,108373,121052,99740,121054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"The reformation of the nuclear membranes following their breakdown in the context of a normal process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"nuclear membrane reassembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear envelope reassembly","type":"related"}],"termid":"GO:0031468","terms_by_termid":{"GO:0007084":null,"GO:0031468":null}}


id: GO:1904600
data:
  {"annotated_genes":["SJAG_01894","SJAG_02700","SJAG_02989","SJAG_02864","SJAG_01943","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90026,94286,100070,100682,100763,116163],"is_not":false,"summary":null,"term":"GO:1904600"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an actin fusion focus.","definition_xrefs":["PMID:25825517","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"part_of","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0044085","GO:0007010","GO:0000747"],"is_obsolete":false,"name":"mating projection actin fusion focus assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin fusion focus assembly","type":"broad"},{"name":"actin fusion focus formation","type":"exact"}],"termid":"GO:1904600","terms_by_termid":{"GO:1904600":null}}


id: GO:0098517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which low humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of low humidity","termid":"GO:0098517"}


id: GO:0035398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Positive regulation of a T cell mediated immune response mediated via cytokine production by a helper T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"helper T cell enhancement of adaptive immune response","termid":"GO:0035397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell enhancement of T cell mediated immune response","synonyms":[{"name":"helper T cell enhancement of T cell mediated immunity","type":"exact"},{"name":"provision of T cell help to T cell","type":"exact"}],"termid":"GO:0035398"}


id: GO:0021881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell that contributes to the commitment of a neuroblast to aneuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:jid","GOC:dgh","PMID:16226447","GO_REF:0000021","GOC:cls","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt-activated signaling pathway involved in forebrain neuron fate commitment (obsolete GO:0021881)","synonyms":[{"name":"Wnt receptor signaling pathway involved in forebrain neuron fate commitment","type":"exact"},{"name":"Wnt receptor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0021881"}


id: GO:0033412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UAG codon-amino acid adaptor activity","synonyms":[{"name":"TAG codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033412"}


id: PBO:0017631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator Whi2","termid":"PBO:0017631"}


id: PR:Q9UUK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An OTU domain-containing protein 6B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin thioesterase otu2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.03","secondary_identifiers":["UniProtKB:Q9UUK3"],"synonyms":[{"name":"OTU domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1952.03","type":"related"},{"name":"Spom972h-OTUD6B","type":"exact"}],"termid":"PR:Q9UUK3"}


id: GO:0043033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages.","definition_xrefs":["PMID:10333591","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"isoamylase complex","synonyms":[{"name":"debranching enzyme complex","type":"broad"}],"termid":"GO:0043033"}


id: GO:0042451
data:
  {"annotated_genes":["SJAG_00044","SJAG_01859","SJAG_00134","SJAG_06634","SJAG_03881","SJAG_03096","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[118682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[62491,75121,95532,67824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any purine nucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside anabolism","type":"exact"},{"name":"purine nucleoside biosynthesis","type":"exact"},{"name":"purine nucleoside formation","type":"exact"},{"name":"purine nucleoside synthesis","type":"exact"}],"termid":"GO:0042451","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null}}


id: PBO:0038648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase 3, pristanoyl","termid":"PBO:0038648"}


id: PBO:0053055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucyl-tRNA synthetase 1","termid":"PBO:0053055"}


id: PR:000046670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe sre2 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor sre2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"Spom-sre2","type":"exact"},{"name":"sterol regulatory element-binding protein 2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000046670"}


id: PBO:0083851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp46p (EXOSC5)","termid":"PBO:0083851"}


id: MONDO:0012348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the CEL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0019254","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 8","secondary_identifiers":["MEDGEN:342845","SCTID:609575003","UMLS:C1853297","MESH:C565225","DOID:0111105","GARD:10662","OMIM:609812"],"synonyms":[{"name":"CEL maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"DPED","type":"related"},{"name":"MODY type 8","type":"exact"},{"name":"MODY8","type":"exact"},{"name":"diabetes and pancreatic exocrine","type":"exact"},{"name":"diabetes and pancreatic exocrine dysfunction","type":"related"},{"name":"diabetes mellitus MODY type 8","type":"related"},{"name":"diabetes-pancreatic exocrine dysfunction syndrome","type":"related"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in CEL","type":"exact"},{"name":"maturity-onset diabetes of the young type 8 with exocrine dysfunction","type":"exact"},{"name":"maturity-onset diabetes of the young, type 8","type":"related"},{"name":"maturity-onset diabetes of the young, type 8, with exocrine dysfunction","type":"related"},{"name":"maturity-onset diabetes of the young, type VIII","type":"exact"},{"name":"type 8 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0012348","xrefs":{"Monarch":{"xref_id":"0012348"}}}


id: PBO:0065076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 3","termid":"PBO:0065076"}


id: PBO:0059208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoregulin","termid":"PBO:0059208"}


id: PBO:0064512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J4, pseudogene","termid":"PBO:0064512"}


id: PBO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 10","termid":"PBO:0052686"}


id: MONDO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preaxial polydactyly of fingers is a limb malformation syndrome characterized by the attachment of a superfluous digit on the first digit. Four types have been defined: Type I (PPD1 or biphalangeal thumb polydactyly) which shows duplication of one or more skeletal components of a biphalangeal thumb; type II (PPD2 or polydactyly of a triphalangeal thumb) which involves the presence of a usually opposable triphalangeal thumb with or without additional duplication of thumb; type III (PPD3 or polydactyly of an index finger) where the thumb is replaced by one or two triphalangeal digits with dermatoglyphic pattern specific for the index finger; and type IV (PPD4 or polysyndactyly) which shows variably mild degrees of thumb duplication and variable syndactyly between 3rd and 4th fingers. Among the four types, PPD1 is the most frequent form. Preaxial polydactyly of fingers is caused by disruptions to the developmental patterning of the limb along the anterior-posterior axis that lead to changes in digit number and identity.","definition_xrefs":["Orphanet:294939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preaxial polydactyly of fingers","secondary_identifiers":["MEDGEN:87498","OMIMPS:174400","icd11.foundation:1066753144","GARD:12767","UMLS:C0345354"],"synonyms":[{"name":"preaxial polydactyly of hand","type":"exact"}],"termid":"MONDO:0017425","xrefs":{"Monarch":{"xref_id":"0017425"}}}


id: GO:1900323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of maltotetraose transport","termid":"GO:1900321"},{"relation_name":"positively_regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltotetraose transport","synonyms":[{"name":"activation of maltotetraose transport","type":"narrow"},{"name":"up regulation of maltotetraose transport","type":"exact"},{"name":"up-regulation of maltotetraose transport","type":"exact"},{"name":"upregulation of maltotetraose transport","type":"exact"}],"termid":"GO:1900323"}


id: PBO:0003972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA/DNA helicase (predicted)","termid":"PBO:0003972"}


id: GO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"negatively_regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin biosynthetic process","synonyms":[{"name":"down regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"down-regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"downregulation of prostaglandin biosynthetic process","type":"exact"},{"name":"inhibition of prostaglandin biosynthetic process","type":"narrow"},{"name":"negative regulation of prostaglandin anabolism","type":"exact"},{"name":"negative regulation of prostaglandin biosynthesis","type":"exact"},{"name":"negative regulation of prostaglandin formation","type":"exact"},{"name":"negative regulation of prostaglandin synthesis","type":"exact"}],"termid":"GO:0031393"}


id: MONDO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete corneal dystrophy, Fuchs endothelial (obsolete MONDO:0000164)","termid":"MONDO:0000164","xrefs":{"Monarch":{"xref_id":"0000164"}}}


id: PBO:0078379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 3, pseudogene","termid":"PBO:0078379"}


id: PBO:0109402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 29, pseudogene","termid":"PBO:0109402"}


id: GO:0072467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that occurs in response to signals generated as a result of cell shape checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete response to cell shape checkpoint signaling (obsolete GO:0072467)","synonyms":[{"name":"cell shape checkpoint effector process","type":"exact"},{"name":"response to signal involved in cell shape checkpoint","type":"exact"}],"termid":"GO:0072467"}


id: PBO:0091955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf13","termid":"PBO:0091955"}


id: PR:Q8TFH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-splicing endonuclease subunit Sen2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21227:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.07c","secondary_identifiers":["UniProtKB:Q8TFH7"],"synonyms":[{"name":"SPAPB17E12.07c","type":"related"},{"name":"Spom972h-TSEN2","type":"exact"},{"name":"tRNA-intron endonuclease sen2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH7"}


id: MONDO:0011169
data:
  {"annotated_genes":["SJAG_04290"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88515],"is_not":false,"summary":null,"term":"MONDO:0011169"}]},"cv_name":"mondo","definition":"Keratosis linearis-ichthyosis congenita-sclerosing keratoderma (KLICK) syndrome is an inherited epidermal disorder characterized by palmoplantar keratoderma, linear hyperkeratotic papules on the flexural side of large joints (cord-like distribution around wrists, in antecubital and popliteal folds), hyperkeratotic plaques (on neck, axillae, elbows, wrists, and knees), mild ichthyosiform scaling, and sclerotic constrictions around fingers that present flexural deformities.","definition_xrefs":["Orphanet:281201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis linearis-ichthyosis congenita-sclerosing keratoderma syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:763775000","GARD:17306","MEDGEN:356430","UMLS:C1866029","MESH:C566600","OMIM:601952"],"synonyms":[{"name":"KLICK","type":"related"},{"name":"KLICK syndrome","type":"exact"},{"name":"Klick syndrome","type":"related"},{"name":"keratosis linearis with ichthyosis congenita and sclerosing keratoderma","type":"related"},{"name":"keratosis linearis-ichthyosis congenita-sclerosing keratoderma syndrome","type":"exact"}],"termid":"MONDO:0011169","terms_by_termid":{"MONDO:0011169":null},"xrefs":{"Monarch":{"xref_id":"0011169"}}}


id: PBO:0058182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4476","termid":"PBO:0058182"}


id: PBO:0088937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex subunit Gar1","termid":"PBO:0088937"}


id: PBO:0003738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP dehydrogenase Gua1 (predicted)","termid":"PBO:0003738"}


id: MONDO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete trichorhinophalangeal syndrome (obsolete MONDO:0000100)","termid":"MONDO:0000100","xrefs":{"Monarch":{"xref_id":"0000100"}}}


id: GO:0007009
data:
  {"annotated_genes":["SJAG_01470","SJAG_00700","SJAG_04887","SJAG_00185","SJAG_02338","SJAG_02087","SJAG_02613","SJAG_02838","SJAG_04930","SJAG_02878","SJAG_00870","SJAG_00261","SJAG_03170","SJAG_01912","SJAG_00053","SJAG_02924","SJAG_04227","SJAG_02351","SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59711,91928,92181,93677,105670,112593,116521,119379,119694,120332],"is_not":false,"summary":null,"term":"GO:0007009"},{"annotations":[97075,98155,112018,79477,94126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"},{"annotations":[74915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[73869,75639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097320"},{"annotations":[73628,102993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097036"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00185":null,"SJAG_00261":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_01233":null,"SJAG_01470":null,"SJAG_01912":null,"SJAG_02087":null,"SJAG_02338":null,"SJAG_02351":null,"SJAG_02613":null,"SJAG_02838":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_03170":null,"SJAG_04227":null,"SJAG_04887":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"plasma membrane organisation","type":"exact"},{"name":"plasma membrane organization and biogenesis","type":"related"}],"termid":"GO:0007009","terms_by_termid":{"GO:0007009":null,"GO:0017121":null,"GO:0032220":null,"GO:0097036":null,"GO:0097320":null}}


id: MONDO:1011886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy with cerebellar abiotrophy, non-human animal","secondary_identifiers":["OMIA:001606"],"termid":"MONDO:1011886","xrefs":{"Monarch":{"xref_id":"1011886"}}}


id: PBO:0047644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 1C","termid":"PBO:0047644"}


id: PBO:0111872
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein","termid":"PBO:0111872"}


id: PBO:0067709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 7","termid":"PBO:0067709"}


id: FYPO:0005401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal during arrest of the mitotic cell cycle in G1 phase due to nitrogen starvation. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during mitotic G1 cell cycle arrest in response to nitrogen starvation","synonyms":[{"name":"increased protein accumulation during mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"related"},{"name":"increased protein level during G1 arrest in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005401"}


id: MONDO:0010757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"widow's peak syndrome","secondary_identifiers":["MESH:C564040","MEDGEN:374133","OMIM:314570","UMLS:C1839112"],"synonyms":[{"name":"widow's peak syndrome","type":"exact"},{"name":"widow's peak, ptosis, and skeletal anomalies","type":"related"}],"termid":"MONDO:0010757","xrefs":{"Monarch":{"xref_id":"0010757"}}}


id: GO:0015908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fatty acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fatty acid transport","termid":"GO:0015908"}


id: PBO:0083707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-luminal alpha 1,3 glucosyltransferase; involved in transfer of oligosaccharides from dolichyl pyrophosphate to asparagine residues of proteins during N-linked protein glycosylation; C998T transition in human ortholog ALG6 causes carbohydrate-deficient glycoprotein syndrome type-Ic; wild-type human ortholog ALG6 can partially complement yeast alg6 mutant","termid":"PBO:0083707"}


id: GO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.","definition_xrefs":["Wikipedia:Myelin","NIF_Subcellular:sao593830697","GOC:jl","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"myelin sheath","secondary_identifiers":["FMA:62983"],"synonyms":[{"name":"Schwann cell myelin sheath","type":"narrow"},{"name":"astrocyte sheath","type":"narrow"},{"name":"oligodendrocyte myelin sheath","type":"narrow"}],"termid":"GO:0043209"}


id: FYPO:0002201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable stubby vegetative cell population (obsolete FYPO:0002201)","synonyms":[{"name":"stubby viable vegetative cell population","type":"exact"}],"termid":"FYPO:0002201"}


id: PBO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug103","termid":"PBO:0016910"}


id: MONDO:0010659
data:
  {"annotated_genes":["SJAG_02238"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86764],"is_not":false,"summary":null,"term":"MONDO:0010659"}]},"cv_name":"mondo","definition":"A nonsyndromic X-linked mental retardation (NS-XLMR) characterized by mild intellectual deficit. FRAXE is the most common form of NS-XLMR.","definition_xrefs":["Orphanet:100973"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02238":null},"genotype_count":0,"is_obsolete":false,"name":"FRAXE intellectual disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2378","UMLS:C0751157","DOID:0080984","MEDGEN:155512","SCTID:716709002","OMIM:309548"],"synonyms":[{"name":"FRAXE intellectual disability","type":"exact"},{"name":"FRAXE intellectual disability syndrome","type":"related"},{"name":"FRAXE mental retardation syndrome","type":"related"},{"name":"FRAXE syndrome","type":"related"},{"name":"X-linked intellectual disability associated with fragile site FRAXE","type":"related"},{"name":"X-linked mental retardation associated with fragile site FRAXE","type":"related"},{"name":"fragile XE syndrome","type":"related"},{"name":"fragile site, folic acid type","type":"related"},{"name":"intellectual developmental disorder, X-linked 109, X-linked recessive","type":"exact"},{"name":"intellectual disability associated with fragile site FRAXE","type":"exact"},{"name":"intellectual disability, X-linked, associated with fragile site FRAXE","type":"related"},{"name":"mental retardation, X-linked, associated with fragile site FRAXE","type":"related"}],"termid":"MONDO:0010659","terms_by_termid":{"MONDO:0010659":null},"xrefs":{"Monarch":{"xref_id":"0010659"}}}


id: PBO:0038491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 2","termid":"PBO:0038491"}


id: PBO:0045769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1","termid":"PBO:0045769"}


id: PBO:0071592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 9","termid":"PBO:0071592"}


id: GO:0010122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including alanine, via ornithine.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"arginine catabolic process to alanine via ornithine","synonyms":[{"name":"arginine breakdown to alanine via ornithine","type":"exact"},{"name":"arginine degradation to alanine via ornithine","type":"exact"}],"termid":"GO:0010122"}


id: PBO:0078696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 7-1","termid":"PBO:0078696"}


id: FYPO:0006103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short cytoplasmic microtubules","termid":"FYPO:0002760"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"short interphase microtubules","synonyms":[{"name":"short cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short interphase cytoplasmic microtubules","type":"exact"},{"name":"short interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006103"}


id: MONDO:0003240
data:
  {"annotated_genes":["SJAG_03689","SJAG_04300","SJAG_03453","SJAG_02463","SJAG_04067","SJAG_01926","SJAG_01941","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"},{"annotations":[88242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007785"},{"annotations":[87654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026731"},{"annotations":[87424,87423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010134"},{"annotations":[87591,89068,89069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A disease involving the thyroid gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01926":null,"SJAG_01941":null,"SJAG_01970":null,"SJAG_02463":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04067":null,"SJAG_04300":null},"genotype_count":0,"is_obsolete":false,"name":"thyroid gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26893","DOID:50","ICD10CM:E00-E07","ICD9:240-246","MEDGEN:1378579","EFO:1000627","SCTID:14304000","ICD9:246.8","Wikipedia:Thyroid_disease","ICD9:246.9","UMLS:C4317107","MESH:D013959"],"synonyms":[{"name":"disease of thyroid gland","type":"exact"},{"name":"disease or disorder of thyroid gland","type":"exact"},{"name":"disorder of thyroid gland","type":"exact"},{"name":"thyroid disease","type":"exact"},{"name":"thyroid gland disease","type":"exact"},{"name":"thyroid gland disease or disorder","type":"exact"},{"name":"thyroid gland diseases","type":"exact"},{"name":"thyroid gland disorder","type":"exact"},{"name":"thyroid gland disorders","type":"exact"}],"termid":"MONDO:0003240","terms_by_termid":{"MONDO:0007681":null,"MONDO:0007785":null,"MONDO:0008566":null,"MONDO:0010134":null,"MONDO:0026731":null},"xrefs":{"Monarch":{"xref_id":"0003240"}}}


id: GO:0051516
data:
  {"annotated_genes":["SJAG_03581","SJAG_00244","SJAG_00514","SJAG_02392","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116889],"is_not":false,"summary":null,"term":"GO:0051516"},{"annotations":[91638,96354,97628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[92495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"regulates","term_name":"bipolar cell growth","termid":"GO:0042815"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051516","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: GO:0048730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the epidermis are generated and organized. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.","definition_xrefs":["GOC:jid","UBERON:0001003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermis morphogenesis","synonyms":[{"name":"hypodermis morphogenesis","type":"related"}],"termid":"GO:0048730"}


id: PBO:0088535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin-A, F-box protein Pof4","termid":"PBO:0088535"}


id: GO:1990539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose substance from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transport","termid":"GO:0015755"},{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"fructose import across plasma membrane","secondary_identifiers":["GO:0032445"],"synonyms":[{"name":"fructose import","type":"related"},{"name":"fructose uptake","type":"exact"}],"termid":"GO:1990539"}


id: PR:O94699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein C83.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.16c","synonyms":[{"name":"Spom972h-SPBC83.16c","type":"exact"}],"termid":"PR:O94699"}


id: PBO:0051673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 3","termid":"PBO:0051673"}


id: PBO:0067629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 801, pseudogene","termid":"PBO:0067629"}


id: PBO:0066050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap1 GTPase-GDP dissociation stimulator 1","termid":"PBO:0066050"}


id: GO:1904432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ferrous iron binding.","definition_xrefs":["PMID:18353247","GOC:kom","GO_REF:0000059","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ferrous iron binding (obsolete GO:1904432)","termid":"GO:1904432"}


id: PBO:0030389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_nuclear_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030389"}


id: GO:0050225
data:
  {"annotated_genes":["SJAG_03213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107302],"is_not":false,"summary":null,"term":"GO:0050225"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pseudouridine = ADP + 2 H+ + pseudouridine 5'-phosphate.","definition_xrefs":["EC:2.7.1.83","RHEA:22448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"pseudouridine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PSEUDOURIDINE-KINASE-RXN","KEGG_REACTION:R03315"],"synonyms":[{"name":"ATP:pseudouridine 5'-phosphotransferase activity","type":"related"},{"name":"pseudouridine kinase (phosphorylating)","type":"related"}],"termid":"GO:0050225","terms_by_termid":{"GO:0050225":null}}


id: GO:0010970
data:
  {"annotated_genes":["SJAG_01775","SJAG_01224","SJAG_02761","SJAG_01211","SJAG_02336","SJAG_02431","SJAG_00918","SJAG_02651","SJAG_02045","SJAG_01371","SJAG_05319","SJAG_01613","SJAG_02731","SJAG_01662","SJAG_02561","SJAG_02286","SJAG_02737","SJAG_05185","SJAG_03673","SJAG_05266","SJAG_03073","SJAG_01863","SJAG_05220","SJAG_04597","SJAG_01546","SJAG_00594","SJAG_00140","SJAG_00397","SJAG_04143","SJAG_01370","SJAG_03540","SJAG_03437","SJAG_00851","SJAG_00113","SJAG_00368","SJAG_04001","SJAG_00332","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92921],"is_not":false,"summary":null,"term":"GO:0010970"},{"annotations":[118791,99360,102516,93156,104764,105055,89524,112883,113234,96990,92763,93620,115785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[108401,113057,103230],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[101016,99435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[89528,93158,99362,78014,101017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[96189],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[105543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[120534,102174,105698,110083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[91521,100408,92751,110706,102312,109320,111716,115936,90914,118762,98556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[106346,106679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The movement of organelles or other particles from one location in the cell to another along microtubules, driven by motor activity.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"cytoskeleton-dependent intracellular transport","termid":"GO:0030705"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"transport along microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of localization by movement along microtubule","type":"exact"},{"name":"microtubule-based transport","type":"broad"},{"name":"movement along microtubule","type":"exact"}],"termid":"GO:0010970","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: GO:1905013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 'de novo' NAD biosynthetic process from L-tryptophan.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:12140278","GOC:PARL","PMID:19843166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of NAD metabolic process","termid":"GO:1902689"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:1905012"},{"relation_name":"negatively_regulates","term_name":"'de novo' NAD+ biosynthetic process from L-tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"negative regulation of 'de novo' NAD biosynthetic process from L-tryptophan","synonyms":[{"name":"down regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"down-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"downregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"downregulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"inhibition of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"inhibition of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"negative regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"broad"},{"name":"negative regulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905013"}


id: MONDO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"So-called nephrogenic adenoma is a distinct metaplastic lesion of the urothelium characterized by aggregates of cuboidal or hobnail cells. These cells line thin papillary fronds on the surface or form tubular structures within the lamina propria.","definition_xrefs":["NCIT:C7413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic adenoma","secondary_identifiers":["UMLS:C0334039","DOID:7334","MEDGEN:452429"],"synonyms":[{"name":"nephrogenic adenoma","type":"exact"}],"termid":"MONDO:0004191","xrefs":{"Monarch":{"xref_id":"0004191"}}}


id: PBO:0076219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite oxidase","termid":"PBO:0076219"}


id: GO:1901631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of presynaptic membrane organization","termid":"GO:1901629"},{"relation_name":"positively_regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of presynaptic membrane organization","synonyms":[{"name":"activation of presynaptic membrane organisation","type":"narrow"},{"name":"activation of presynaptic membrane organization","type":"narrow"},{"name":"positive regulation of pre-synaptic membrane organization","type":"exact"},{"name":"positive regulation of presynaptic membrane organisation","type":"exact"},{"name":"up regulation of presynaptic membrane organisation","type":"exact"},{"name":"up regulation of presynaptic membrane organization","type":"exact"},{"name":"up-regulation of presynaptic membrane organisation","type":"exact"},{"name":"up-regulation of presynaptic membrane organization","type":"exact"},{"name":"upregulation of presynaptic membrane organisation","type":"exact"},{"name":"upregulation of presynaptic membrane organization","type":"exact"}],"termid":"GO:1901631"}


id: PBO:0055939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 46","termid":"PBO:0055939"}


id: PBO:0050023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP beta 1","termid":"PBO:0050023"}


id: GO:1904200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which iodide is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:20392814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodide transport","termid":"GO:0015705"},{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"iodide transmembrane transport","termid":"GO:1904200"}


id: PBO:0040766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 1","termid":"PBO:0040766"}


id: MONDO:0700280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder caused by the infection in Lyme disease and manifesting after the original infection.","definition_xrefs":["MONDO:patterns/post_infectious_disease","PMID:37209716","PMID:36958992","PMID:27407225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-bacterial disorder","termid":"MONDO:0021673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-treatment Lyme disease syndrome","secondary_identifiers":["NCIT:C119039","MEDGEN:855646","UMLS:C3890422"],"synonyms":[{"name":"PLDS","type":"exact"},{"name":"disorder due to consequences of Lyme disease","type":"exact"},{"name":"post-Lyme disease","type":"exact"},{"name":"post-Lyme disease syndrome","type":"exact"},{"name":"post-treatment Lyme disease syndrome","type":"exact"}],"termid":"MONDO:0700280","xrefs":{"Monarch":{"xref_id":"0700280"}}}


id: GO:0060673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another.","definition_xrefs":["PMID:16916377","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"embryonic placenta development","termid":"GO:0001892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in placenta development","synonyms":[{"name":"cell-cell signalling involved in placenta development","type":"exact"}],"termid":"GO:0060673"}


id: PBO:0051124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-2 (pseudogene)","termid":"PBO:0051124"}


id: PBO:0029499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_population_(obsolete_FYPO:0002216)","termid":"PBO:0029499"}


id: GO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"negative regulation of protein activation cascade","termid":"GO:2000258"},{"relation_name":"negatively_regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"negative regulation of kinin cascade","synonyms":[{"name":"down regulation of kinin cascade","type":"exact"},{"name":"down-regulation of kinin cascade","type":"exact"},{"name":"downregulation of kinin cascade","type":"exact"},{"name":"inhibition of kinin cascade","type":"narrow"}],"termid":"GO:0002257"}


id: FYPO:0001974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a greater than normal number of cells contain 1C DNA content. This may result from cell cycle arrest or delay.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased number of cells with 1C DNA content","synonyms":[{"name":"increased amount of cells with 1C DNA content","type":"exact"},{"name":"increased number of cells containing 1C DNA","type":"exact"}],"termid":"FYPO:0001974"}


id: GO:0035725
data:
  {"annotated_genes":["SJAG_04167","SJAG_04616","SJAG_04028","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61998,68736,91089],"is_not":false,"summary":null,"term":"GO:0035725"},{"annotations":[68246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"}]},"cv_name":"biological_process","definition":"A process in which a sodium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transport","termid":"GO:0006814"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"sodium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sodium ion membrane transport","type":"exact"}],"termid":"GO:0035725","terms_by_termid":{"GO:0035725":null,"GO:0036376":null}}


id: PBO:0085058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonessential serine/threonine protein kinase; possible role in DNA damage response; influences tolerance to high levels of ethanol","termid":"PBO:0085058"}


id: PBO:0113176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin adaptor required for nuclear translocation of the proteasome; mediates interaction between nuclear import factor Srp1p and the proteasome; nuclear import of the 26S proteasome is coupled to RanGTP-initiated, ubiquitin-independent proteasomal degradation of Sts1p; Sts1p and Srp1p couple proteasomes to nascent polypeptides emerging from the ribosome for cotranslational degradation; role in ubiquitin-mediated protein degradation; contains a bipartite nuclear localization sequence","termid":"PBO:0113176"}


id: PBO:0079416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 10","termid":"PBO:0079416"}


id: GO:0005832
data:
  {"annotated_genes":["SJAG_04121","SJAG_00447","SJAG_02926","SJAG_03320","SJAG_02378","SJAG_00609","SJAG_03570","SJAG_01002"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71490,74347,75292,77858,78480,79752,79846,81491],"is_not":false,"summary":null,"term":"GO:0005832"}]},"cv_name":"cellular_component","definition":"A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor.","definition_xrefs":["GOC:sgd_curators","PMID:11580267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_02378":null,"SJAG_02926":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04121":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"chaperonin-containing T-complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CCT particle","type":"exact"},{"name":"TriC","type":"exact"}],"termid":"GO:0005832","terms_by_termid":{"GO:0005832":null}}


id: MONDO:0021066
data:
  {"annotated_genes":["SJAG_01671","SJAG_00260","SJAG_01895","SJAG_03453","SJAG_03787","SJAG_03677","SJAG_02231","SJAG_00440","SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88528,88526,88527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[88786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[87577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[88029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001187"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm involving the urinary system. --2003","definition_xrefs":["NCIT:C3431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00440":null,"SJAG_01144":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02231":null,"SJAG_03453":null,"SJAG_03677":null,"SJAG_03787":null},"genotype_count":0,"is_obsolete":false,"name":"urinary system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:126879004","ONCOTREE:BLADDER","NCIT:C192666","UMLS:C0042076","MEDGEN:52949","ICD9:239.5"],"synonyms":[{"name":"neoplasm of renal system","type":"exact"},{"name":"neoplasm of the urinary system","type":"exact"},{"name":"neoplasm of the urinary tract","type":"exact"},{"name":"neoplasm of urinary system","type":"exact"},{"name":"neoplasm of urinary tract","type":"exact"},{"name":"renal system neoplasm","type":"exact"},{"name":"renal system neoplasm (disease)","type":"exact"},{"name":"renal system tumor","type":"exact"},{"name":"renal system tumour","type":"exact"},{"name":"tumor of renal system","type":"exact"},{"name":"tumor of the urinary system","type":"exact"},{"name":"tumor of the urinary tract","type":"exact"},{"name":"tumor of urinary system","type":"exact"},{"name":"tumor of urinary tract","type":"exact"},{"name":"tumour of renal system","type":"exact"},{"name":"tumour of the urinary system","type":"exact"},{"name":"tumour of the urinary tract","type":"exact"},{"name":"tumour of urinary system","type":"exact"},{"name":"tumour of urinary tract","type":"exact"},{"name":"urinary system neoplasm","type":"exact"},{"name":"urinary system tumor","type":"exact"},{"name":"urinary system tumour","type":"exact"},{"name":"urinary tract neoplasm","type":"exact"},{"name":"urinary tract tumor","type":"exact"},{"name":"urinary tract tumour","type":"exact"}],"termid":"MONDO:0021066","terms_by_termid":{"MONDO:0001187":null,"MONDO:0003789":null,"MONDO:0007273":null,"MONDO:0007763":null,"MONDO:0011121":null,"MONDO:0013602":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021066"}}}


id: GO:0051672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the cell wall peptidoglycans of another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall peptidoglycan in other organism (obsolete GO:0051672)","synonyms":[{"name":"catabolic process of cell wall peptidoglycans of other organism","type":"exact"},{"name":"catabolism of cell wall peptidoglycans of other organism","type":"exact"},{"name":"cell wall catabolic process in other organism","type":"narrow"},{"name":"cell wall catabolism in other organism","type":"narrow"},{"name":"cell wall peptidoglycan catabolic process in another organism","type":"exact"}],"termid":"GO:0051672"}


id: PBO:0046539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 2","termid":"PBO:0046539"}


id: GO:0019161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha,omega-diamine + 2-oxoglutarate = an omega-aminoaldehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"diamine transaminase activity","secondary_identifiers":["MetaCyc:DIAMTRANSAM-RXN","RHEA:18217"],"synonyms":[{"name":"amine transaminase activity","type":"related"},{"name":"amine-ketoacid transaminase activity","type":"related"},{"name":"diamine aminotransferase activity","type":"exact"},{"name":"diamine-ketoglutaric transaminase activity","type":"related"},{"name":"diamine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0019161"}


id: PBO:0038437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 3","termid":"PBO:0038437"}


id: MONDO:0009451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital T-cell immunodeficiency","termid":"MONDO:0001222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Nezelof syndrome","secondary_identifiers":["icd11.foundation:215376282","DOID:2012","GARD:7201","MEDGEN:101814","MESH:C536288","OMIM:242700","SCTID:55602000","ICD9:279.13","UMLS:C0152094","ICD10CM:D81.4","Orphanet:83471"],"synonyms":[{"name":"Nezelof syndrome","type":"exact"},{"name":"Nezelof's syndrome","type":"exact"},{"name":"T-lymphocyte deficiency","type":"exact"},{"name":"immune defect due to absence Of Thymus","type":"related"},{"name":"immune defect due to absence of THYMUS","type":"related"},{"name":"thymic aplasia","type":"related"}],"termid":"MONDO:0009451","xrefs":{"Monarch":{"xref_id":"0009451"}}}


id: PBO:0044708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6 pseudogene 2","termid":"PBO:0044708"}


id: PBO:0038734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7A","termid":"PBO:0038734"}


id: PBO:0049389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 2","termid":"PBO:0049389"}


id: PBO:0064554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proopiomelanocortin","termid":"PBO:0064554"}


id: MONDO:0003452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes of the snail-like structure (cochlea) of the inner ear (labyrinth) which can involve its nervous tissue, blood vessels, or fluid (endolymph).","definition_xrefs":["MESH:D015834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cochlear disorder","secondary_identifiers":["UMLS:C0009197","DOID:5463","MEDGEN:1023"],"synonyms":[{"name":"cochlea disease","type":"exact"},{"name":"cochlea disease or disorder","type":"exact"},{"name":"disease of cochlea","type":"exact"},{"name":"disease or disorder of cochlea","type":"exact"},{"name":"disorder of cochlea","type":"exact"}],"termid":"MONDO:0003452","xrefs":{"Monarch":{"xref_id":"0003452"}}}


id: MONDO:0018584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete placental insufficiency (obsolete MONDO:0018584)","termid":"MONDO:0018584","xrefs":{"Monarch":{"xref_id":"0018584"}}}


id: MONDO:0014624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brown syndrome is a rare eye disorder characterized by defects in eye movements caused by abnormalities of the superior oblique tendon sheath of the superior oblique muscle.","direct_ancestors":[{"relation_name":"is_a","term_name":"mechanical strabismus","termid":"MONDO:0004753"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brown syndrome","secondary_identifiers":["ICD10CM:H50.61","DOID:10235","ICD9:378.61","OMIM:616407","SCTID:35929003","UMLS:C0155339","MEDGEN:102332"],"synonyms":[{"name":"BRWNS","type":"exact"},{"name":"Brown syndrome","type":"exact"},{"name":"Brown tendon sheath syndrome","type":"exact"},{"name":"Brown's (tendon) sheath syndrome","type":"exact"},{"name":"Brown's sheath syndrome","type":"exact"},{"name":"Brown's tendon sheath syndrome","type":"exact"},{"name":"superior oblique tendon sheath syndrome","type":"exact"},{"name":"tendon sheath adherence, Superior oblique","type":"exact"}],"termid":"MONDO:0014624","xrefs":{"Monarch":{"xref_id":"0014624"}}}


id: PBO:0064231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCH1 antisense RNA 1","termid":"PBO:0064231"}


id: PBO:0063326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 2","termid":"PBO:0063326"}


id: PBO:0031300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_spindle","termid":"PBO:0031300"}


id: PBO:0071620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 38","termid":"PBO:0071620"}


id: MONDO:0012287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome type 1","termid":"MONDO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005497"],"is_obsolete":false,"name":"Stickler syndrome, type I, nonsyndromic ocular","secondary_identifiers":["GARD:15461","MEDGEN:322820","MESH:C563709","OMIM:609508","UMLS:C1836080"],"synonyms":[{"name":"Stickler syndrome, atypical","type":"related"},{"name":"Stickler syndrome, type I, predominantly ocular","type":"related"},{"name":"Stickler syndrome, type i, nonsyndromic ocular","type":"exact"},{"name":"rhegmatogenous retinal detachment, autosomal dominant","type":"related"}],"termid":"MONDO:0012287","xrefs":{"Monarch":{"xref_id":"0012287"}}}


id: GO:0120286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of tryptophan.","definition_xrefs":["GOC:krc","PMID:31498992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"tryptophan sensor activity","synonyms":[{"name":"tryptophan sensing activity","type":"exact"}],"termid":"GO:0120286"}


id: GO:0009627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The salicylic acid-mediated response to a pathogen which confers broad spectrum resistance.","definition_xrefs":["GOC:lr","Wikipedia:Systemic_acquired_resistance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"systemic acquired resistance","synonyms":[{"name":"salicylic acid-dependent systemic resistance","type":"exact"}],"termid":"GO:0009627"}


id: PBO:0068476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 55, pseudogene","termid":"PBO:0068476"}


id: MONDO:0005372
data:
  {"annotated_genes":["SJAG_01941","SJAG_05196","SJAG_02006","SJAG_03867","SJAG_02035","SJAG_00786","SJAG_00377","SJAG_03286","SJAG_00663","SJAG_04663","SJAG_03051","SJAG_02223","SJAG_01465","SJAG_03635","SJAG_02500","SJAG_02439","SJAG_04324","SJAG_04176","SJAG_03698","SJAG_01837","SJAG_03418","SJAG_02463","SJAG_02294","SJAG_02690","SJAG_02339","SJAG_04758"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[88954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[87121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[86949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[88148,88147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[88558,88557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[86900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[87448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"},{"annotations":[87817,87818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[87835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[88853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[88705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[87703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[87754,87755,87756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0976123"},{"annotations":[87719,87718,87721,87724,87720,87722,87723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","definition":"The inability of the male to effect fertilization of an ovum after a specified period of unprotected intercourse. Male sterility is permanent infertility.","definition_xrefs":["MESH:D007248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00663":null,"SJAG_00786":null,"SJAG_01465":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02223":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02439":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02690":null,"SJAG_03051":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_03867":null,"SJAG_04176":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04758":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"male infertility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0021364","icd11.foundation:753457327","SCTID:2904007","ICD10CM:N46","ICD9:606.9","MEDGEN:5796","EFO:0004248","ICD9:606","DOID:12336"],"synonyms":[{"name":"infertility disorder of male reproductive system","type":"exact"},{"name":"male reproductive system infertility","type":"exact"},{"name":"male reproductive system infertility disorder","type":"exact"}],"termid":"MONDO:0005372","terms_by_termid":{"MONDO:0009461":null,"MONDO:0010767":null,"MONDO:0011720":null,"MONDO:0013901":null,"MONDO:0014961":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null,"MONDO:0976123":null},"xrefs":{"Monarch":{"xref_id":"0005372"}}}


id: GO:0052321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phytoalexin metabolism, the chemical reactions and pathways involving phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phytoalexin metabolic process (obsolete GO:0052321)","synonyms":[{"name":"down regulation of phytoalexin metabolism","type":"exact"},{"name":"down-regulation of phytoalexin metabolism","type":"exact"},{"name":"downregulation of phytoalexin metabolism","type":"exact"},{"name":"inhibition of phytoalexin metabolism","type":"narrow"},{"name":"negative regulation of phytoalexin metabolism","type":"exact"}],"termid":"GO:0052321"}


id: GO:0047401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + trithionate = H+ + sulfate + thiosulfate.","definition_xrefs":["RHEA:21884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid sulfur-sulfur bonds","termid":"GO:0016828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trithionate hydrolase activity","secondary_identifiers":["EC:3.12.1.1","MetaCyc:3.12.1.1-RXN","KEGG_REACTION:R01930"],"synonyms":[{"name":"trithionate thiosulfohydrolase activity","type":"related"}],"termid":"GO:0047401"}


id: PBO:0066638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal modification protein rimK like family member A","termid":"PBO:0066638"}


id: MONDO:0018416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 59","secondary_identifiers":["UMLS:C4750857","Orphanet:401795","GARD:21695","MEDGEN:1669596"],"synonyms":[{"name":"SPG59","type":"exact"}],"termid":"MONDO:0018416","xrefs":{"Monarch":{"xref_id":"0018416"}}}


id: GO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9751024","Reactome:R-HSA-109529","Reactome:R-HSA-727740","Reactome:R-HSA-109534","Reactome:R-HSA-109527","Reactome:R-HSA-109536","Reactome:R-HSA-727749","Reactome:R-HSA-727768","Reactome:R-HSA-9754929","Reactome:R-HSA-9755015","Reactome:R-HSA-9755035","Reactome:R-HSA-727767","Reactome:R-HSA-5628807"],"synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"narrow"}],"termid":"GO:0005337"}


id: GO:0075189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hyphopodium formation","termid":"GO:0075188"},{"relation_name":"positively_regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hyphopodium formation","synonyms":[{"name":"positive regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075189"}


id: PBO:0116301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the TTT complex and the telomere cap complex; subunit of the TTT Hsp90 cochaperone complex that is involved in chromatin remodeling and telomeric chromatin regulation, and  involved in chromatin remodeling and the telomere cap complex; DNA-binding protein specific to single-stranded yeast telomeric DNA repeats; required for telomere length regulation and telomere position effect; involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0116301"}


id: GO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication and chromosome cycle (obsolete GO:0000067)","synonyms":[{"name":"DNA replication and chromosome cycle","type":"exact"}],"termid":"GO:0000067"}


id: PBO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 16","termid":"PBO:0071475"}


id: PBO:0026845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_polymerase_II_carboxy-terminal_domain_kinase_activity","termid":"PBO:0026845"}


id: PBO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAT regulator of WNT signaling pathway 1","termid":"PBO:0047961"}


id: PBO:0041379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5 3' UTR overlapping transcript 1","termid":"PBO:0041379"}


id: PBO:0001436
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MAPRE1","termid":"PBO:0001436"}


id: PBO:0072607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 2","termid":"PBO:0072607"}


id: GO:2000065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid biosynthetic process","termid":"GO:0031947"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"is_a","term_name":"regulation of cortisol biosynthetic process","termid":"GO:2000064"},{"relation_name":"negatively_regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cortisol biosynthetic process","synonyms":[{"name":"negative regulation of cortisol anabolism","type":"related"},{"name":"negative regulation of cortisol biosynthesis","type":"exact"},{"name":"negative regulation of cortisol formation","type":"exact"},{"name":"negative regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000065"}


id: GO:0052739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylserine + H2O = 2-acyl-sn-glycero-3-phosphoserine + fatty acid.","definition_xrefs":["KEGG_REACTION:R04034"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylserine 1-acylhydrolase activity (obsolete GO:0052739)","termid":"GO:0052739"}


id: MONDO:0030983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome, IIa 2F","secondary_identifiers":["MEDGEN:1809587","OMIM:619947","UMLS:C5677013"],"synonyms":[{"name":"WS2F","type":"exact"},{"name":"Waardenburg syndrome, IIa 2F","type":"exact"}],"termid":"MONDO:0030983","xrefs":{"Monarch":{"xref_id":"0030983"}}}


id: MONDO:0012138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital muscular dystrophy characterized by autosomal recessive inheritance of muscular dystrophy with mental retardation and structural brain abnormalities that has material basis in homozygous or compound heterozygous mutation in the LARGE gene on chromosome 22q12.","definition_xrefs":["PMID:12966029","DOID:0110637","PMID:19067344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy type B6","secondary_identifiers":["OMIM:608840","MESH:C563844","Orphanet:98894","UMLS:C1837229","MEDGEN:373284"],"synonyms":[{"name":"MDC1D","type":"exact"},{"name":"MDDGB6","type":"exact"},{"name":"congenital muscular dystrophy large-related","type":"exact"},{"name":"congenital muscular dystrophy type 1D","type":"exact"},{"name":"muscular dystrophy, congenital, large-related","type":"related"},{"name":"muscular dystrophy, congenital, type 1D","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B, 6","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type B, 6","type":"exact"}],"termid":"MONDO:0012138","xrefs":{"Monarch":{"xref_id":"0012138"}}}


id: GO:0008118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP + H+.","definition_xrefs":["RHEA:52316","PMID:10206952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase activity","secondary_identifiers":["EC:2.4.3.6","MetaCyc:2.4.99.6-RXN"],"synonyms":[{"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase","type":"exact"},{"name":"alpha2->3 sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-beta-galactosyl(1->4)acetylglucosaminide alpha2->3-sialyltransferase activity","type":"related"},{"name":"neolactotetraosylceramide alpha-2,3-sialyltransferase activity","type":"narrow"}],"termid":"GO:0008118"}


id: PBO:0079117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 54","termid":"PBO:0079117"}


id: PBO:0059240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11 pseudogene 3","termid":"PBO:0059240"}


id: GO:0004820
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74629],"is_not":false,"summary":null,"term":"GO:0004820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).","definition_xrefs":["EC:6.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016874","GO:0140098","GO:0003674","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"glycine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380048","Reactome:R-HSA-380240","RHEA:16013"],"synonyms":[{"name":"glycine:tRNAGly ligase (AMP-forming) activity","type":"related"},{"name":"glycyl translase activity","type":"related"},{"name":"glycyl-tRNA synthetase activity","type":"exact"},{"name":"glycyl-transfer RNA synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004820","terms_by_termid":{"GO:0004820":null}}


id: GO:0052779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any amino disaccharide, a disaccharide having one or more substituted or unsubstituted amino groups in place of hydroxy groups at unspecified positions.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino disaccharide metabolic process","termid":"GO:0052779"}


id: GO:0046926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The post-translational cross-linking of a cysteine residue to an L-threonine residue to form 2-(S-L-cysteinyl)-D-allo-threonine.","definition_xrefs":["RESID:AA0342","PMID:12696888","PMID:36302388"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-(S-L-cysteinyl)-D-allo-threonine (obsolete GO:0046926)","termid":"GO:0046926"}


id: MONDO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyper-IgE recurrent infection syndrome (obsolete MONDO:0000038)","termid":"MONDO:0000038","xrefs":{"Monarch":{"xref_id":"0000038"}}}


id: MONDO:0012607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the IRAK3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 5","secondary_identifiers":["MEDGEN:370858","UMLS:C1970224","OMIM:611064"],"synonyms":[{"name":"ASRT5","type":"related"},{"name":"IRAK3 inherited susceptibility to asthma","type":"exact"},{"name":"asthma susceptibility 5","type":"exact"},{"name":"asthma-related traits, susceptibility to, 5","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 5","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in IRAK3","type":"exact"}],"termid":"MONDO:0012607","xrefs":{"Monarch":{"xref_id":"0012607"}}}


id: GO:1903481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903481)","synonyms":[{"name":"down regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"downregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"inhibition of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"inhibition of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"inhibition of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"negative regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"negative regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903481"}


