# terms

id: GO:0097354
data:
  {"annotated_genes":["SJAG_02583","SJAG_03810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61907,69435],"is_not":false,"summary":null,"term":"GO:0097354"}]},"cv_name":"biological_process","definition":"The covalent attachment of a prenyl group to a molecule; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["PMID:21351751","PMID:22123822","PMID:22660767","PMID:18029206","GOC:di","PMID:22642693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_03810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylation","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0097354","terms_by_termid":{"GO:0097354":null}}


id: PBO:0057281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 502","termid":"PBO:0057281"}


id: PBO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein Srb mediator subunit kinase Srb10","termid":"PBO:0001045"}


id: PBO:0073254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 6","termid":"PBO:0073254"}


id: PR:O74555
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11208:SF6","OMA:SCHPO04361","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchpoint-bridging protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.06c","secondary_identifiers":["UniProtKB:O74555"],"synonyms":[{"name":"Spom972h-SF1","type":"exact"},{"name":"splicing factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"zinc finger protein bpb1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74555"}


id: GO:0003782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete F-actin capping activity (obsolete GO:0003782)","synonyms":[{"name":"F-actin capping activity","type":"exact"}],"termid":"GO:0003782"}


id: GO:0160225
data:
  {"annotated_genes":["SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114369],"is_not":false,"summary":null,"term":"GO:0160225"}]},"cv_name":"molecular_function","definition":"Unwinding G-quadruplex structures in nucleic acids. A G-quadruplex is a specialized structure formed in DNA/RNA when sequences rich in guanine (G) assemble into a unique four-stranded arrangement.","definition_xrefs":["PMID:34113828","PMID:1324186","PMID:26883636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a nucleic acid","termid":"GO:0140640"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"G-quadruplex unwinding activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-quadruplex resolving activity","type":"exact"},{"name":"G4 unwinding activity","type":"exact"}],"termid":"GO:0160225","terms_by_termid":{"GO:0160225":null}}


id: MONDO:0100182
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010943"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing schizophrenia.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"is_obsolete":false,"name":"schizophrenia, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:390920","UMLS:C2675945"],"termid":"MONDO:0100182","terms_by_termid":{"MONDO:0010943":null},"xrefs":{"Monarch":{"xref_id":"0100182"}}}


id: FYPO:0007950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is higher than normal when a cell is subject to nitrogen stress.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mating efficiency","termid":"FYPO:0001043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased mating efficency during nitrogen stress","termid":"FYPO:0007950"}


id: MONDO:0005697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections of the brain caused by the protozoan toxoplasma gondii that primarily arise in individuals with immunologic deficiency syndromes (see also aids-related opportunistic infections). The infection may involve the brain diffusely or form discrete abscesses. Clinical manifestations include seizures, altered mentation, headache, focal neurologic deficits, and intracranial hypertension. (From Joynt, Clinical Neurology, 1998, Ch27, pp41-3)","definition_xrefs":["MESH:D016781"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"toxoplasmosis","termid":"MONDO:0005989"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral toxoplasmosis","secondary_identifiers":["MEDGEN:38846","SCTID:192701001","UMLS:C0085315","DOID:10551","EFO:0007200","ICD9:130.0"],"synonyms":[{"name":"Toxoplasma encephalitis","type":"exact"},{"name":"encephalitis due to acquired toxoplasmosis","type":"related"},{"name":"meningoencephalitis due to toxoplasmosis","type":"related"}],"termid":"MONDO:0005697","xrefs":{"Monarch":{"xref_id":"0005697"}}}


id: GO:0016182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Budding of synaptic vesicles during the formation of constitutive recycling vesicles from early endosomes.","definition_xrefs":["GOC:curators","PMID:24596248","PMID:10099709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"synaptic vesicle budding","termid":"GO:0070142"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle budding from endosome","synonyms":[{"name":"endosome to synaptic vesicle budding","type":"related"},{"name":"synaptic vesicle budding involved in synaptic vesicle exocytosis","type":"exact"}],"termid":"GO:0016182"}


id: MONDO:0020531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder characterized by deficiency of the enzyme long-chain acyl-coenzyme A dehydrogenase that metabolizes long-chain fatty acids. Signs and symptoms appear in infancy or childhood and may be triggered during fasting, illness or exercise. They include hypoglycemia, muscle weakness and lethargy.","definition_xrefs":["NCIT:C84537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0005267"],"is_obsolete":false,"name":"long chain acyl-CoA dehydrogenase deficiency","secondary_identifiers":["icd11.foundation:692829041","Orphanet:99900","MEDGEN:65087","SCTID:237996001","MESH:C535690","UMLS:C0220711"],"synonyms":[{"name":"ACADL deficiency","type":"related"},{"name":"LCAD","type":"exact"},{"name":"LCAD deficiency","type":"related"},{"name":"acyl-CoA dehydrogenase, long-chain deficiency","type":"exact"},{"name":"inborn error of long-chain-acyl-CoA dehydrogenase activity","type":"exact"},{"name":"inborn long-chain-acyl-CoA dehydrogenase activity disorder","type":"exact"},{"name":"long chain acyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"long-chain acyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"long-chain acyl-Coenzyme A dehydrogenase deficiency","type":"exact"},{"name":"rare inborn error of long-chain-acyl-CoA dehydrogenase activity","type":"exact"}],"termid":"MONDO:0020531","xrefs":{"Monarch":{"xref_id":"0020531"}}}


id: MONDO:0015659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infectious disease with epilepsy (obsolete MONDO:0015659)","secondary_identifiers":["Orphanet:166490"],"termid":"MONDO:0015659","xrefs":{"Monarch":{"xref_id":"0015659"}}}


id: GO:0070376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["GOC:add","ISBN:0896039986","ISBN:0121245462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERK5 cascade","synonyms":[{"name":"regulation of BMK cascade","type":"exact"},{"name":"regulation of BMK signaling pathway","type":"exact"},{"name":"regulation of BMK signalling pathway","type":"exact"},{"name":"regulation of BMK1 cascade","type":"exact"},{"name":"regulation of ERK5 signaling pathway","type":"exact"},{"name":"regulation of MAPK7 cascade","type":"exact"}],"termid":"GO:0070376"}


id: PBO:0085779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the AP180 family, involved in clathrin cage assembly; binds Pan1p and clathrin; YAP1802 has a paralog, YAP1801, that arose from the whole genome duplication","termid":"PBO:0085779"}


id: PBO:0044427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 54, pseudogene","termid":"PBO:0044427"}


id: PBO:0076830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 1","termid":"PBO:0076830"}


id: PBO:0079049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 5-1","termid":"PBO:0079049"}


id: GO:0018295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via 3'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0144"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via 3'-(8alpha-FAD)-L-histidine (obsolete GO:0018295)","termid":"GO:0018295"}


id: MONDO:0008153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic bone disorder characterized clinically by progressive extraskeletal bone formation presenting in early life with cutaneous ossification, that progressively involves subcutaneous and then subsequently deep connective tissues, including muscle and fascia. POH overlaps with a number of related genetic disorders including Albright hereditary osteodystrophy, pseudohypoparathyroidism (see these terms), and primary osteoma cutis, that share the common features of superficial heterotopic ossification in association with inactivating mutations of GNAS gene (20q13.2-q13.3), coding for guanine nucleotide-binding proteins. POH can, however, be distinguished clinically by the deep and progressive nature of the heterotopic bone formation.","definition_xrefs":["Orphanet:2762"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with progressive ossification of skin, skeletal muscle, fascia, tendons and ligaments (obsolete MONDO:0018231)","termid":"MONDO:0018231"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"disorder of GNAS inactivation","termid":"MONDO:0800466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"progressive osseous heteroplasia","secondary_identifiers":["UMLS:C0334041","MedDRA:10048902","icd11.foundation:1107209347","MESH:C562735","MEDGEN:137714","OMIM:166350","SCTID:719271000","DOID:0111535","GARD:109","NORD:1618"],"synonyms":[{"name":"POH","type":"exact"},{"name":"ectopic ossification familial type","type":"related"},{"name":"ectopic ossification, familial","type":"related"},{"name":"familial ectopic ossification","type":"exact"},{"name":"osseous heteroplasia, progressive","type":"related"},{"name":"osteoma cutis","type":"related"},{"name":"poh","type":"exact"}],"termid":"MONDO:0008153","xrefs":{"Monarch":{"xref_id":"0008153"}}}


id: GO:0021653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 1. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 structural organization","synonyms":[{"name":"rhombomere 1 structural organisation","type":"exact"}],"termid":"GO:0021653"}


id: PR:O74354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acidic repeat-containing protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03821","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein dnt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.02c","secondary_identifiers":["UniProtKB:O74354"],"synonyms":[{"name":"Spom972h-ACRC","type":"exact"}],"termid":"PR:O74354"}


id: GO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the cumulus oophorus to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["PMID:21380641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of cumulus oophorus","synonyms":[{"name":"penetration of cumulus cells layer","type":"exact"},{"name":"penetration of cumulus mass","type":"exact"}],"termid":"GO:0061956"}


id: PBO:0083954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin small complex (gamma-TuSC) receptor; recruits the gamma-TuSC complex to the cytoplasmic side of the SPB, connecting nuclear microtubules to the SPB; involved in astral microtubule formation, stabilization, and with Stu2p, anchoring astral MTs at the cytoplasmic face of the SPB, and regulating plus-end MT dynamics; regulated by Cdc5 kinase","termid":"PBO:0083954"}


id: GO:0039572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by stopping, preventing, or reducing the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT2 protein. For example, the measles virus V protein inhibits tyrosine phosphorylation of STAT2, thereby preventing STAT2 activation.","definition_xrefs":["PMID:12804771"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT2 activity by negative regulation of STAT2 tyrosine phosphorylation (obsolete GO:0039572)","synonyms":[{"name":"inhibition by virus of tyrosine phosphorylation of STAT2","type":"exact"}],"termid":"GO:0039572"}


id: GO:0050223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxybenzoate + H+ = catechol + CO2.","definition_xrefs":["RHEA:22416","EC:4.1.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"protocatechuate decarboxylase activity","secondary_identifiers":["MetaCyc:PROTOCATECHUATE-DECARBOXYLASE-RXN","KEGG_REACTION:R00822"],"synonyms":[{"name":"3,4-dihydrobenzoate decarboxylase activity","type":"related"},{"name":"3,4-dihydroxybenzoate carboxy-lyase (catechol-forming)","type":"related"},{"name":"3,4-dihydroxybenzoate decarboxylase activity","type":"related"},{"name":"protocatechuate carboxy-lyase activity","type":"related"}],"termid":"GO:0050223"}


id: PBO:0044288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 51B","termid":"PBO:0044288"}


id: PR:000027558
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A that is a translation product of the Schizosaccharomyces pombe 972h- hta1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha","synonyms":[{"name":"H2A.1","type":"broad"},{"name":"hta1","type":"exact"}],"termid":"PR:000027558"}


id: PBO:0065896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB40B, member RAS oncogene family","termid":"PBO:0065896"}


id: SOFP:reported_na_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reported_na_change","termid":"SOFP:reported_na_change"}


id: GO:1900768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fonsecin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"fonsecin metabolic process","termid":"GO:1900767"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone catabolic process","termid":"GO:1900786"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fonsecin catabolic process","synonyms":[{"name":"fonsecin breakdown","type":"exact"},{"name":"fonsecin catabolism","type":"exact"},{"name":"fonsecin degradation","type":"exact"}],"termid":"GO:1900768"}


id: PBO:0011960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild_type","termid":"PBO:0011960"}


id: MONDO:0015053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary angioedema type 1 (HAE 1) is a form of hereditary angioedema characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema with C1Inh deficiency","termid":"MONDO:0033946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema type 1","secondary_identifiers":["GARD:16933","UMLS:C2717906","SCTID:234619000","ICD9:279.8","MEDGEN:403466"],"synonyms":[{"name":"HAE 1","type":"exact"},{"name":"HAE-I","type":"exact"},{"name":"hereditary angioneurotic edema type 1","type":"exact"},{"name":"hereditary angioneurotic oedema type 1","type":"exact"}],"termid":"MONDO:0015053","xrefs":{"Monarch":{"xref_id":"0015053"}}}


id: PBO:0055375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2804","termid":"PBO:0055375"}


id: MONDO:0009096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary diffuse leukoencephalopathy with axonal spheroids and pigmented glia (obsolete MONDO:0009096)","secondary_identifiers":["NANDO:1200546"],"termid":"MONDO:0009096","xrefs":{"Monarch":{"xref_id":"0009096"}}}


id: PBO:0110379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 5","termid":"PBO:0110379"}


id: PBO:0071631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 50","termid":"PBO:0071631"}


id: PBO:0078453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5P (pseudogene)","termid":"PBO:0078453"}


id: GO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.","definition_xrefs":["GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune system process","secondary_identifiers":["Wikipedia:Immune_system"],"termid":"GO:0002376"}


id: PBO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_endocytosis","termid":"PBO:0031776"}


id: GO:0015946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of methanol to methyl-Coenzyme M.","definition_xrefs":["MetaCyc:CO2FORM-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanol oxidation","termid":"GO:0015946"}


id: MONDO:0015587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic epilepsy characterized by speech disorder (including a range of symptoms from dysarthria, speech dyspraxia, receptive and expressive language delay/regression and acquired aphasia to subtle impairments of conversational speech) and epilepsy (mostly focal and secondary generalized childhood-onset seizures, sometimes with aura). Mild to severe intellectual disability may also be observed.","definition_xrefs":["Orphanet:163721"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"rolandic epilepsy-speech dyspraxia syndrome","secondary_identifiers":["GARD:17002","MEDGEN:1633042","icd11.foundation:288052868","UMLS:C4707308"],"termid":"MONDO:0015587","xrefs":{"Monarch":{"xref_id":"0015587"}}}


id: GO:0120288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of intramembrane cleaving aspartic-type endopeptidase activity.","definition_xrefs":["GOC:krc","PMID:32616437"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic endopeptidase activity, intramembrane cleaving (obsolete GO:0120288)","termid":"GO:0120288"}


id: PBO:0080292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 56 pseudogene","termid":"PBO:0080292"}


id: PR:Q09785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine dehydrogenase [decarboxylating], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11773:SF0","PRO:DNx","OMA:SCHPO00067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine dehydrogenase (decarboxylating), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.06c","secondary_identifiers":["UniProtKB:Q09785"],"synonyms":[{"name":"Spom972h-GLDC","type":"exact"},{"name":"glycine cleavage system P protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycine decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glycine dehydrogenase (aminomethyl-transferring) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09785"}


id: GO:0048069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the eye of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigmentation","secondary_identifiers":["Wikipedia:Eye_color"],"termid":"GO:0048069"}


id: PBO:0042167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 28","termid":"PBO:0042167"}


id: MONDO:0017883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multilocular cystic clear cell renal cell neoplasm of low malignant potential (obsolete MONDO:0017883)","termid":"MONDO:0017883","xrefs":{"Monarch":{"xref_id":"0017883"}}}


id: MONDO:0030723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 83","secondary_identifiers":["OMIM:619808","MEDGEN:1812664","UMLS:C5676951"],"synonyms":[{"name":"DFNA83","type":"exact"},{"name":"deafness, autosomal dominant 83","type":"narrow"}],"termid":"MONDO:0030723","xrefs":{"Monarch":{"xref_id":"0030723"}}}


id: GO:0090235
data:
  {"annotated_genes":["SJAG_04280","SJAG_04140","SJAG_03048","SJAG_01837","SJAG_00082","SJAG_05290","SJAG_01805","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[106985,113793,117849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[118522,91773,95581,104179,113033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of metaphase plate congression, the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"metaphase chromosome alignment","termid":"GO:0051310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaphase plate congression","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome congression","type":"exact"}],"termid":"GO:0090235","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null}}


id: PBO:0052821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 87, pseudogene","termid":"PBO:0052821"}


id: PBO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR pseudogene 2","termid":"PBO:0042919"}


id: PBO:0005232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase Pin1","termid":"PBO:0005232"}


id: PBO:0067734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 33","termid":"PBO:0067734"}


id: GO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases made as part of a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:add","PMID:12789499","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in defense response","termid":"GO:0002679"}


id: GO:0019015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The whole of the genetic information of a virus, contained as either DNA or RNA.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete viral genome (obsolete GO:0019015)","termid":"GO:0019015"}


id: PBO:0049276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gelsolin","termid":"PBO:0049276"}


id: PBO:0063792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20 like 1","termid":"PBO:0063792"}


id: FYPO:0002474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to double-strand break site","synonyms":[{"name":"decreased protein localisation to double-strand break site","type":"exact"},{"name":"decreased protein localization to DSB site","type":"exact"},{"name":"decreased protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"decreased protein localization to site of double-strand break","type":"exact"},{"name":"reduced protein localization to double-strand break site","type":"exact"}],"termid":"FYPO:0002474"}


id: PBO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.-","termid":"PBO:0002237"}


id: PBO:0061133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 1","termid":"PBO:0061133"}


id: MONDO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apocrine gland secretion, variation 1n (obsolete MONDO:0044224)","secondary_identifiers":["OMIM:117800"],"synonyms":[{"name":"Ear wax, wet/dry","type":"related"},{"name":"apocrine gland secretion, variation IN","type":"related"},{"name":"axillary odor, variation 1N","type":"related"},{"name":"axillary odor, variation in","type":"exact"},{"name":"cerumen, variation 1N","type":"related"},{"name":"colostrum secretion, variation 1N","type":"related"},{"name":"colostrum secretion, variation in","type":"exact"},{"name":"earwax, wet/dry","type":"exact"},{"name":"wet wax","type":"related"}],"termid":"MONDO:0044224","xrefs":{"Monarch":{"xref_id":"0044224"}}}


id: MONDO:0044624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pediatric collagenous gastritis","secondary_identifiers":["GARD:21998","MEDGEN:1805938","Orphanet:487809","UMLS:C5680109"],"synonyms":[{"name":"childhood-onset collagenous gastritis","type":"exact"}],"termid":"MONDO:0044624","xrefs":{"Monarch":{"xref_id":"0044624"}}}


id: FYPO:0000933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"decreased protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"decreased protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to microtubule cytoskeleton during vegetative growth","type":"exact"}],"termid":"FYPO:0000933"}


id: MONDO:0011339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the WASHC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 8","secondary_identifiers":["MEDGEN:400359","UMLS:C1863704","Orphanet:100989","GARD:9591","DOID:0110823","MESH:C580458","OMIM:603563"],"synonyms":[{"name":"SPG8","type":"exact"},{"name":"WASHC5 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal dominant spastic paraplegia 8","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 8","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in WASHC5","type":"exact"},{"name":"hereditary spastic paraplegia type 8","type":"exact"},{"name":"spastic paraplegia 8","type":"related"},{"name":"spastic paraplegia 8, autosomal dominant","type":"related"}],"termid":"MONDO:0011339","xrefs":{"Monarch":{"xref_id":"0011339"}}}


id: FYPO:0006421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Fbh1 (also called Rad22) accumulates is lower than normal.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Fbh1 foci during vegetative growth","synonyms":[{"name":"decreased number of Fbh1 foci during mitotic cell cycle","type":"related"},{"name":"reduced number of Fbh1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0006421"}


id: PBO:0045259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 2 beta","termid":"PBO:0045259"}


id: PBO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family (predicted)","termid":"PBO:0004722"}


id: GO:0080151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salicylic acid mediated signal transduction.","definition_xrefs":["PMID:20181750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of salicylic acid mediated signaling pathway","termid":"GO:2000031"},{"relation_name":"positively_regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"positive regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0080151"}


id: PBO:0044166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen triple helix repeat containing 1","termid":"PBO:0044166"}


id: PBO:0066192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B antisense RNA 1","termid":"PBO:0066192"}


id: PBO:0028543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_primary_cell_septum_biogenesis","termid":"PBO:0028543"}


id: PBO:0029091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules","termid":"PBO:0029091"}


id: GO:0042009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-15.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-15 binding","synonyms":[{"name":"IL-15 binding","type":"exact"}],"termid":"GO:0042009"}


id: GO:1901732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quercetin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin metabolic process","synonyms":[{"name":"quercetin metabolism","type":"exact"}],"termid":"GO:1901732"}


id: PBO:0059586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial amidoxime reducing component 1","termid":"PBO:0059586"}


id: GO:0097191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:yaf","GOC:mtg_apoptosis","PMID:17340152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-5357769"],"synonyms":[{"name":"death receptor-mediated apoptosis","type":"narrow"},{"name":"extrinsic apoptosis","type":"narrow"},{"name":"extrinsic apoptotic pathway","type":"exact"},{"name":"extrinsic apoptotic signaling pathway in presence of ligand","type":"narrow"},{"name":"extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:0097191"}


id: PBO:0060279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 13","termid":"PBO:0060279"}


id: PBO:0072265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 3","termid":"PBO:0072265"}


id: GO:2001023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to drug","synonyms":[{"name":"regulation of drug resistance","type":"related"},{"name":"regulation of drug susceptibility/resistance","type":"related"}],"termid":"GO:2001023"}


id: FYPO:0003391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ubiquinone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal ubiquinone binding","synonyms":[{"name":"abnormal coenzyme Q binding","type":"exact"}],"termid":"FYPO:0003391"}


id: SO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an exon.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_region","synonyms":[{"name":"exon region","type":"exact"}],"termid":"SO:0000852"}


id: GO:0097471
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a mossy fiber onto the dendrite of a granule cell; each mossy fiber can have up to 50 rosettes.","definition_xrefs":["Wikipedia:Mossy_fiber_(cerebellum)","NIF_Subcellular:nlx_subcell_091021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric synapse","termid":"GO:0032279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mossy fiber rosette","synonyms":[{"name":"cerebellar mossy fiber to granule cell synapse","type":"exact"}],"termid":"GO:0097471"}


id: PBO:0077688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF2 and NCK interacting kinase","termid":"PBO:0077688"}


id: PBO:0059400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S31 pseudogene 2","termid":"PBO:0059400"}


id: MONDO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transformation of chronic lymphocytic leukemia into aggressive non-Hodgkin's lymphoma, usually diffuse large B-cell lymphoma (immunoblastic or centroblastic variant). Occasional cases of transformation to Hodgkin's lymphoma have also been described, particularly in patients treated with purine nucleotide analogs. Molecular genetic studies suggest that in approximately half of the cases, the lymphoma is clonally related to the underlying chronic lymphocytic leukemia, whereas in the remaining cases the lymphoma probably represents a secondary, unrelated neoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Richter syndrome","secondary_identifiers":["DOID:1703","MEDGEN:91159","icd11.foundation:1736108343","NCIT:C35424","SCTID:277550009","GARD:7578","UMLS:C0349631"],"synonyms":[{"name":"Richter syndrome","type":"exact"},{"name":"Richter transformation","type":"exact"},{"name":"Richter's syndrome","type":"exact"},{"name":"Richter's transformation","type":"exact"}],"termid":"MONDO:0002083","xrefs":{"Monarch":{"xref_id":"0002083"}}}


id: MONDO:0004337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paget disease involving the perianal skin.","definition_xrefs":["NCIT:C7476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal Paget disease","termid":"MONDO:0002651"},{"relation_name":"is_a","term_name":"cutaneous Paget disease","termid":"MONDO:0002655"},{"relation_name":"is_a","term_name":"anal margin carcinoma","termid":"MONDO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0004335"],"is_obsolete":false,"name":"perianal skin Paget disease","secondary_identifiers":["DOID:7708","MEDGEN:231372","UMLS:C1332270"],"synonyms":[{"name":"Paget disease of the anal margin","type":"exact"},{"name":"Paget's disease of the anal margin","type":"exact"},{"name":"anal margin Paget's disease","type":"exact"},{"name":"perianal skin Paget disease","type":"exact"},{"name":"perianal skin Paget's disease","type":"exact"},{"name":"perianal skin mammary Paget's disease","type":"exact"}],"termid":"MONDO:0004337","xrefs":{"Monarch":{"xref_id":"0004337"}}}


id: PBO:0003655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"InVasioN defective","termid":"PBO:0003655"}


id: GO:0007351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Subdivision of the embryo along the anterior/posterior axis into anterior, posterior and terminal regions.","definition_xrefs":["ISBN:0879694238","GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tripartite regional subdivision","termid":"GO:0007351"}


id: GO:0090011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes that contribute to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in primitive streak formation (obsolete GO:0090011)","synonyms":[{"name":"Wnt receptor signaling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt receptor signalling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt-activated signaling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090011"}


id: GO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in sustaining CRISPR repeat clusters, including capture of new spacer elements, expansion or contraction of clusters, propagation of the leader sequence and repeat clusters within a genome, transfer of repeat clusters and CRISPR-associated (cas) genes to new genomes, transcription of the CRISPR repeat arrays into RNA and processing, and interaction of CRISPR/cas loci with the host genome. CRISPR (clustered regularly interspaced short palindromic repeat) elements are a family of sequence elements containing multiple direct repeats of 24-48 bp with weak dyad symmetry which are separated by regularly sized nonrepetitive spacer sequences.","definition_xrefs":["PMID:16292354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"maintenance of CRISPR repeat elements","synonyms":[{"name":"CRISPR element metabolic process","type":"related"},{"name":"CRISPR element metabolism","type":"related"},{"name":"maintenance of clustered regularly interspaced short palindromic repeat elements","type":"exact"}],"termid":"GO:0043571"}


id: PBO:0071861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3","termid":"PBO:0071861"}


id: MONDO:0003865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of melanoma occurring most often on the plantar, palmar, subungual, and periungual skin. It presents as a pigmented macular lesion with irregular borders. Morphologically, it consists of atypical spindled and dendritic melanocytes. The epidermis is often hyperplastic and there is pagetoid infiltration of the epidermis by anaplastic cells.","definition_xrefs":["NCIT:C4022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous melanoma","termid":"MONDO:0005012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"acral lentiginous melanoma","secondary_identifiers":["SCTID:254732008","MEDGEN:87530","ONCOTREE:ACRM","UMLS:C0346037","ICDO:8744/3","HP:0012060","DOID:6367"],"synonyms":[{"name":"ALM","type":"related"},{"name":"acral lentiginous malignant melanoma","type":"exact"},{"name":"acral lentiginous malignant melanoma of skin","type":"related"},{"name":"acral lentiginous melanoma","type":"exact"},{"name":"acral lentiginous melanoma (disease)","type":"exact"},{"name":"acral lentiginous melanoma, malignant","type":"exact"},{"name":"acral lentiginous melanoma, malignant (morphologic abnormality)","type":"exact"},{"name":"acral melanoma","type":"related"},{"name":"malignant acral lentiginous melanoma","type":"exact"},{"name":"palmar/plantar melanoma","type":"related"},{"name":"subungual melanoma","type":"related"}],"termid":"MONDO:0003865","xrefs":{"Monarch":{"xref_id":"0003865"}}}


id: FYPO:0007461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to histidine. Cells stop growing (and may die) at a concentration of histidine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to histidine","synonyms":[{"name":"hypersensitive to histidine","type":"exact"},{"name":"sensitive to histidine during mitotic cell cycle","type":"related"},{"name":"sensitive to histidine during vegetative growth","type":"exact"}],"termid":"FYPO:0007461"}


id: PBO:0051417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-11","termid":"PBO:0051417"}


id: PBO:0071191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 32","termid":"PBO:0071191"}


id: GO:1903871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA recombinase mediator complex.","definition_xrefs":["PMID:18347097","GOC:rb","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair complex assembly","termid":"GO:0090735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"DNA recombinase mediator complex assembly","synonyms":[{"name":"DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903871"}


id: PBO:0040839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell acute lymphoblastic leukemia expressed","termid":"PBO:0040839"}


id: PBO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Mud1","termid":"PBO:0000793"}


id: PBO:0053289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 2","termid":"PBO:0053289"}


id: PBO:0013037
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PNKP","termid":"PBO:0013037"}


id: PBO:0075979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAT4 antisense RNA 1","termid":"PBO:0075979"}


id: PBO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 5","termid":"PBO:0070621"}


id: GO:0090443
data:
  {"annotated_genes":["SJAG_04455","SJAG_06270","SJAG_01790","SJAG_00229","SJAG_02514","SJAG_03508"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72197,76293,97415,103058,109349,111991],"is_not":false,"summary":null,"term":"GO:0090443"}]},"cv_name":"cellular_component","definition":"A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.","definition_xrefs":["PMID:22119525","GOC:vw","PMID:21561862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FAR/SIN/STRIPAK complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"FAR complex","type":"related"},{"name":"SIN inhibitory phosphatase (SIP) complex","type":"exact"},{"name":"SIN inhibitory phosphatase complex","type":"exact"},{"name":"SIP complex","type":"exact"},{"name":"STRIPAK signalling complex","type":"related"},{"name":"striatin interacting phosphatase and kinase complex","type":"exact"}],"termid":"GO:0090443","terms_by_termid":{"GO:0090443":null}}


id: PBO:0087402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stretch-activated Ca2+-permeable cation channel; required for Ca2+ influx stimulated by mating pheromones and some abiotic stresses; sensor of compressive mechanical stress; N-glycosylated membrane protein of the ER and plasma membrane; interacts with Cch1p; oligomerizes; is an alpha2/delta-like protein and participates in the generation of stretch-activated Ca2+-permeable cation channel activity when expressed in mammalian cells","termid":"PBO:0087402"}


id: MONDO:0016434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of dermis elastic tissue disorder that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete acquired dermis elastic tissue disorder (obsolete MONDO:0016434)","secondary_identifiers":["Orphanet:228218"],"synonyms":[{"name":"acquired dermis elastic tissue disorder","type":"exact"}],"termid":"MONDO:0016434","xrefs":{"Monarch":{"xref_id":"0016434"}}}


id: FYPO:0000281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more, but smaller, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuoles present in increased numbers during vegetative growth","termid":"FYPO:0000952"},{"relation_name":"is_a","term_name":"vacuoles present in increased numbers during vegetative growth","termid":"FYPO:0000952"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during vegetative growth","synonyms":[{"name":"fragmented vacuoles during vegetative growth","type":"related"},{"name":"small vacuoles present in greater numbers during vegetative growth","type":"exact"},{"name":"small vacuoles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"vacuole fusion defects","type":"related"},{"name":"vacuole organization defects, fragmented vacuoles during vegetative growth","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during vegetative growth","type":"exact"}],"termid":"FYPO:0000281"}


id: PBO:0027459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rotenone","termid":"PBO:0027459"}


id: PBO:0041820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine N-methyltransferase 1","termid":"PBO:0041820"}


id: FYPO:0005185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that contains one or more septa, has condensed chromatin, and undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:8557037","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, septated cell with condensed chromatin","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, septated cell with condensed chromatin","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, septated cell with condensed chromatin","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, septated cell with condensed chromatin","type":"exact"}],"termid":"FYPO:0005185"}


id: MONDO:0100146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Variants in the gene ATP6AP2 have been associated with a multitude of diseases, including X-linked syndromic ID Hedera type, X-linked Parkinsonism-spasticity syndrome, and congenital disorder of glycosylation type 2R. Phenotypes include global developmental delay, intellectual disability, progressive neurologic decline, spasticity, seizures, infantile onset of liver failure, recurrent infections, dysmorphic features, and features of parkinsonism (rigidity, resting tremor, bradykinesia). These phenotypes do not appear in all individuals with one of the above disease assertions, but many are overlapping phenotypes.","definition_xrefs":["PMID:23595882","PMID:26467484","PMID:26376863","PMID:15746149","PMID:29127204","PMID:30985297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6AP2-related disorder","synonyms":[{"name":"ATP6AP2-related disorder","type":"exact"}],"termid":"MONDO:0100146","xrefs":{"Monarch":{"xref_id":"0100146"}}}


id: GO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system pattern specification","synonyms":[{"name":"renal system pattern formation","type":"related"}],"termid":"GO:0072048"}


id: MONDO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thanatophoric dysplasia type 1 (TD1) is a form of TD characterized by short, bowed femurs, micromelia, narrow thorax, and brachydactyly.","definition_xrefs":["Orphanet:1860"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe achondroplasia-developmental delay-acanthosis nigricans syndrome","termid":"MONDO:0014658"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"thanatophoric dysplasia","termid":"MONDO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"thanatophoric dysplasia type 1","secondary_identifiers":["MEDGEN:358383","NANDO:1200875","GARD:9295","NCIT:C98583","OMIM:270230","OMIM:187600","UMLS:C1868678"],"synonyms":[{"name":"PLSD San Diego type","type":"related"},{"name":"Platyspondylic lethal skeletal dysplasia, San Diego type","type":"related"},{"name":"TD1","type":"exact"},{"name":"lethal short-limbed Platyspondylic dwarfism, San Diego type","type":"related"},{"name":"thanatophoric dwarfism","type":"related"},{"name":"thanatophoric dwarfism 1","type":"related"},{"name":"thanatophoric dwarfism type 1","type":"exact"},{"name":"thanatophoric dysplasia","type":"related"},{"name":"thanatophoric dysplasia type I","type":"related"},{"name":"thanatophoric dysplasia, type 1","type":"exact"},{"name":"thanatophoric dysplasia, type I","type":"related"},{"name":"type 1 thanatophoric dysplasia","type":"exact"}],"termid":"MONDO:0008546","xrefs":{"Monarch":{"xref_id":"0008546"}}}


id: MONDO:0032890
data:
  {"annotated_genes":["SJAG_01315"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88567],"is_not":false,"summary":null,"term":"MONDO:0032890"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01315":null},"genotype_count":0,"is_obsolete":false,"name":"neuromuscular disease and ocular or auditory anomalies with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618733","UMLS:C5231483","MEDGEN:1684689"],"synonyms":[{"name":"NEUROMUSCULAR DISEASE AND OCULAR OR AUDITORY ANOMALIES WITH OR WITHOUT SEIZURES","type":"related"},{"name":"NMOAS","type":"related"}],"termid":"MONDO:0032890","terms_by_termid":{"MONDO:0032890":null},"xrefs":{"Monarch":{"xref_id":"0032890"}}}


id: PBO:0082296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginyl-tRNA synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YDR341C has a paralog, MSR1, that arose from the whole genome duplication","termid":"PBO:0082296"}


id: PBO:0075927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 19","termid":"PBO:0075927"}


id: GO:0036038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located at the ciliary transition zone and consists of several proteins some of which are membrane bound. Acts as an organiser of transition zone inner structure, specifically the Y-shaped links, in conjunction with the NPHP complex. The MKS complex also acts as part of the selective barrier that prevents diffusion of proteins between the ciliary cytoplasm and cellular cytoplasm as well as between the ciliary membrane and plasma membrane.","definition_xrefs":["GOC:cilia","PMID:21422230","GOC:sp","PMID:25869670","PMID:22179047","PMID:26595381","PMID:21725307","PMID:26982032","PMID:21565611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MKS complex","synonyms":[{"name":"B9 complex","type":"narrow"},{"name":"MKS module","type":"exact"},{"name":"TCTN-B9D complex","type":"broad"},{"name":"tectonic complex","type":"narrow"},{"name":"tectonic-like complex","type":"narrow"}],"termid":"GO:0036038"}


id: MONDO:0018133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Attenuated Chédiak-Higashi syndrome (CHS) is a very rare and atypical form of CHS, a genetic disorder characterized by partial oculocutaneous albinism (OCA), severe immunodeficiency, mild bleeding, neurological dysfunction and lymphoproliferative disorder.","definition_xrefs":["Orphanet:352723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"attenuated Chédiak-Higashi syndrome","secondary_identifiers":["ICD10CM:E70.3","GARD:21527","SCTID:720520009","UMLS:C4304022","MEDGEN:929691"],"synonyms":[{"name":"attenuated Chediak-Higashi syndrome","type":"exact"},{"name":"atypical Chediak-Higashi syndrome","type":"exact"},{"name":"atypical Chédiak-Higashi syndrome","type":"exact"}],"termid":"MONDO:0018133","xrefs":{"Monarch":{"xref_id":"0018133"}}}


id: GO:0008831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.133","RHEA:21796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dTDP-4-dehydrorhamnose reductase activity","secondary_identifiers":["KEGG_REACTION:R02777","MetaCyc:DTDPDEHYRHAMREDUCT-RXN"],"synonyms":[{"name":"TDP-4-keto-rhamnose reductase activity","type":"related"},{"name":"dTDP-4-keto-L-rhamnose reductase activity","type":"related"},{"name":"dTDP-4-ketorhamnose reductase activity","type":"related"},{"name":"dTDP-6-deoxy-L-mannose dehydrogenase activity","type":"related"},{"name":"dTDP-6-deoxy-L-mannose:NADP+ 4-oxidoreductase activity","type":"related"},{"name":"reductase, thymidine diphospho-4-ketorhamnose","type":"related"},{"name":"thymidine diphospho-4-ketorhamnose reductase activity","type":"related"}],"termid":"GO:0008831"}


id: GO:0031071
data:
  {"annotated_genes":["SJAG_00186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80557],"is_not":false,"summary":null,"term":"GO:0031071"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine.","definition_xrefs":["EC:2.8.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"cysteine desulfurase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:43892","Reactome:R-HSA-947514","Reactome:R-HSA-1362408"],"synonyms":[{"name":"IscS","type":"related"},{"name":"L-cysteine:enzyme cysteine sulfurtransferase activity","type":"related"},{"name":"NIFS","type":"related"},{"name":"SufS","type":"related"},{"name":"cysteine desulfurylase activity","type":"related"}],"termid":"GO:0031071","terms_by_termid":{"GO:0031071":null}}


id: MONDO:0011579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset retinal degeneration is an inherited retinal dystrophy characterized by delayed dark adaptation and nyctalopia and drusen deposits presenting in adulthood, followed by cone and rod degeneration that presents in the sixth decade of life, which leads to central vision loss. Anterior segment features such as peripupillary iris transillumination defects and abnormally long anterior zonular insertions are also observed. Choroidal neovascularization and glaucoma may occur in the late stages of the disease.","definition_xrefs":["Orphanet:67042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"late-onset retinal degeneration","secondary_identifiers":["GARD:4357","MEDGEN:344198","MESH:C565309","OMIM:605670","SCTID:719431007","UMLS:C1854065","DOID:0060869"],"synonyms":[{"name":"LORD","type":"exact"},{"name":"autosomal dominant late-onset retinal degeneration","type":"exact"},{"name":"late-onset retinal degeneration","type":"exact"},{"name":"pigmentary retinopathy","type":"related"},{"name":"retinal Degeneration, late-onset, autosomal dominant","type":"related"}],"termid":"MONDO:0011579","xrefs":{"Monarch":{"xref_id":"0011579"}}}


id: GO:0050835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0356"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide (obsolete GO:0050835)","termid":"GO:0050835"}


id: GO:0007407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a neuroblast resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast activation","secondary_identifiers":["GO:0043351","GO:0043352"],"termid":"GO:0007407"}


id: GO:0052392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of a flux of calcium ions that occurs as part of the defense response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont calcium ion flux (obsolete GO:0052392)","synonyms":[{"name":"activation by organism of symbiont Ca2+ flux","type":"exact"},{"name":"activation by organism of symbiont calcium ion flux","type":"exact"},{"name":"induction by organism of defense-related symbiont calcium ion flux","type":"exact"},{"name":"induction by organism of symbiont Ca2+ flux","type":"exact"}],"termid":"GO:0052392"}


id: GO:0036436
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An Isw1 complex that binds DNA and has nucleosome-stimulated ATPase activity. In S. cerevisiae, contains an Isw1p ATPase subunit in complex with Ioc3p.","definition_xrefs":["GOC:jd","PMID:12482963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Isw1 complex","termid":"GO:0016587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Isw1a complex","termid":"GO:0036436"}


id: GO:0050749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with an apolipoprotein E receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor binding (obsolete GO:0050749)","synonyms":[{"name":"apolipoprotein E receptor binding","type":"exact"}],"termid":"GO:0050749"}


id: MONDO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare malignant adipose tissue neoplasm that arises from the bone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosarcoma","termid":"MONDO:0009807"},{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"liposarcoma of bone","secondary_identifiers":["DOID:3381","NCIT:C7598","UMLS:C1332581","MEDGEN:231450"],"synonyms":[{"name":"bone liposarcoma","type":"exact"},{"name":"bone tissue liposarcoma","type":"exact"},{"name":"liposarcoma of bone","type":"exact"},{"name":"liposarcoma of bone tissue","type":"exact"},{"name":"liposarcoma of the bone","type":"exact"}],"termid":"MONDO:0002634","xrefs":{"Monarch":{"xref_id":"0002634"}}}


id: GO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water","synonyms":[{"name":"response to water stimulus","type":"exact"}],"termid":"GO:0009415"}


id: PBO:0050324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 26","termid":"PBO:0050324"}


id: MONDO:0022729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrodysplasia","termid":"MONDO:0022723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia punctata with steroid sulfatase deficiency","termid":"MONDO:0022729","xrefs":{"Monarch":{"xref_id":"0022729"}}}


id: GO:0031843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 2 neuropeptide Y receptor binding","synonyms":[{"name":"type 2 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031843"}


id: PBO:0085588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in assembly of the succinate dehydrogenase complex; mitochondrial; putative chaperone","termid":"PBO:0085588"}


id: PBO:0028032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_chromosome_fragmentation_upon_segregation","termid":"PBO:0028032"}


id: MONDO:0016640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibrous dysplasia of bone (obsolete MONDO:0016640)","termid":"MONDO:0016640","xrefs":{"Monarch":{"xref_id":"0016640"}}}


id: PR:P36600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cgs1 gene.","definition_xrefs":["UniProtKB:P36600","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.03","synonyms":[{"name":"PKA regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cgs1","type":"exact"}],"termid":"PR:P36600"}


id: PBO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt1","termid":"PBO:0001978"}


id: PBO:0058856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8085","termid":"PBO:0058856"}


id: MONDO:1011682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal gland disease, non-human animal","secondary_identifiers":["OMIA:002523"],"termid":"MONDO:1011682","xrefs":{"Monarch":{"xref_id":"1011682"}}}


id: PBO:0013811
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by G. gallus cdc2","termid":"PBO:0013811"}


id: MONDO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the sweat glands. Most cases present as nodular lesions on the digits, usually in the hands. It is characterized by the presence of epithelial cells in the dermis forming nodules. Cystic structures containing papillary projections are also present. It may recur and metastasize, most commonly to the lungs.","definition_xrefs":["NCIT:C27534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary eccrine carcinoma","termid":"MONDO:0003531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"digital papillary eccrine carcinoma","secondary_identifiers":["ONCOTREE:ADPA","MEDGEN:277955","DOID:5590","UMLS:C1367789"],"synonyms":[{"name":"aggressive digital papillary adenocarcinoma","type":"exact"},{"name":"digit papillary eccrine carcinoma","type":"exact"},{"name":"digital papillary carcinoma","type":"exact"},{"name":"digital papillary carcinoma of skin","type":"exact"},{"name":"digital papillary eccrine carcinoma","type":"exact"},{"name":"papillary digital eccrine carcinoma","type":"exact"},{"name":"papillary eccrine carcinoma of digit","type":"exact"}],"termid":"MONDO:0044789","xrefs":{"Monarch":{"xref_id":"0044789"}}}


id: MONDO:0013283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency","termid":"MONDO:0015517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency, common variable, 3","secondary_identifiers":["OMIM:613493","GARD:15668","MEDGEN:462088","UMLS:C3150738","DOID:0081146"],"synonyms":[{"name":"CVID3","type":"related"},{"name":"antibody deficiency due to CD19 defect","type":"related"},{"name":"immunodeficiency, common variable, 3","type":"exact"},{"name":"immunodeficiency, common variable, type 3","type":"exact"}],"termid":"MONDO:0013283","xrefs":{"Monarch":{"xref_id":"0013283"}}}


id: GO:0016116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotenoid metabolic process","synonyms":[{"name":"carotenoid metabolism","type":"exact"}],"termid":"GO:0016116"}


id: GO:0019140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myo-inositol = ADP + 1D-myo-inositol 3-phosphate.","definition_xrefs":["EC:2.7.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol 3-kinase activity","secondary_identifiers":["MetaCyc:MYO-INOSITOL-1-KINASE-RXN","RHEA:21804"],"synonyms":[{"name":"ATP:myo-inositol 1-phosphotransferase activity","type":"related"},{"name":"inositol 1-kinase activity","type":"related"},{"name":"inositol-1-kinase (phosphorylating)","type":"related"},{"name":"myo-inositol 1-kinase activity","type":"related"},{"name":"myo-inositol 3-kinase activity","type":"exact"},{"name":"myoinositol kinase activity","type":"broad"}],"termid":"GO:0019140"}


id: MONDO:0009693
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89096],"is_not":false,"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C3242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"},{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"plasma cell myeloma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:9538","icd11.foundation:526287100","Orphanet:29073","EFO:0001378","ICDO:9732/3","NORD:1469","MEDGEN:10122","MedDRA:10028228","ONCOTREE:PCM","ICD10CM:C90.0","MESH:D009101","OMIM:254500","UMLS:C0026764","icd11.foundation:1582389689","GARD:7108","ICD9:203.0"],"synonyms":[{"name":"Al amyloidosis","type":"related"},{"name":"Kahler disease","type":"exact"},{"name":"Kahler's disease","type":"exact"},{"name":"Multiple Myeloma","type":"exact"},{"name":"amyloidosis, systemic","type":"related"},{"name":"medullary plasmacytoma","type":"exact"},{"name":"multiple myeloma","type":"exact"},{"name":"multiple myeloma, resistance to, Somatic mutation","type":"exact"},{"name":"multiple myeloma, susceptibility to, Somatic mutation","type":"exact"},{"name":"multiple myeloma/plasma cell myeloma","type":"exact"},{"name":"myeloid neoplasm of plasma cell","type":"exact"},{"name":"myeloma","type":"exact"},{"name":"myeloma - multiple","type":"related"},{"name":"myeloma, multiple","type":"exact"},{"name":"myeloma, plasma cell, malignant","type":"exact"},{"name":"myelomatosis","type":"exact"},{"name":"plasma cell myeloid neoplasm","type":"exact"},{"name":"plasma cell myeloma","type":"exact"}],"termid":"MONDO:0009693","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0009693"}}}


id: MONDO:0004801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral hypoactive labyrinth","secondary_identifiers":["DOID:9496","ICD9:386.53","UMLS:C0155517","MEDGEN:510003"],"termid":"MONDO:0004801","xrefs":{"Monarch":{"xref_id":"0004801"}}}


id: PBO:0073887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 4","termid":"PBO:0073887"}


id: PBO:0039556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 3","termid":"PBO:0039556"}


id: PBO:0011509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome BAR domain protein Pil1","termid":"PBO:0011509"}


id: PBO:0083462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene KTR3","termid":"PBO:0083462"}


id: PBO:0067806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 108","termid":"PBO:0067806"}


id: PBO:0069750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1032, pseudogene","termid":"PBO:0069750"}


id: PBO:0004676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase family protein (predicted)","termid":"PBO:0004676"}


id: MONDO:0020313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified myelodysplastic/myeloproliferative disease (obsolete MONDO:0020313)","secondary_identifiers":["icd11.foundation:855969668","Orphanet:98825"],"synonyms":[{"name":"unclassified mixed myelodysplastic/myeloproliferatic syndrome","type":"exact"}],"termid":"MONDO:0020313","xrefs":{"Monarch":{"xref_id":"0020313"}}}


id: PATO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000713 relative time value (obsolete PATO:0000713)","termid":"PATO:0000713"}


id: PBO:0088996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Ltc1","termid":"PBO:0088996"}


id: FYPO:0000693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA-1,N6-ethenoadenine N-glycosylase activity","synonyms":[{"name":"reduced DNA-1,N6-ethenoadenine N-glycosylase activity","type":"exact"}],"termid":"FYPO:0000693"}


id: FYPO:0007545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic nuclear bridge for a longer time than normal.","definition_xrefs":["PomBase:mah","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic nuclear bridge","synonyms":[{"name":"increased duration of protein localisation to mitotic nuclear bridge","type":"exact"},{"name":"increased duration of protein localization to mitotic nuclear bridge during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to mitotic nuclear bridge during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic nuclear bridge","type":"exact"}],"termid":"FYPO:0007545"}


id: GO:0005724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Heterochromatic regions of the chromosome found at the telomeres of a chromosome in the nucleus.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear telomeric heterochromatin (obsolete GO:0005724)","termid":"GO:0005724"}


id: PBO:0082042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2Fe-2S mitochondrial protein involved in redox quality control; may maintain protein redox status by targeting oxidation sensitive cysteine residues; bishistidinyl coordinated, non-Rieske [2Fe-2S] cluster containing thiredoxin-like ferredoxin; forms a functional complex with Osm1p and Erv1p in the IMS; required for assembly of numerous mitochondrial import complexes; essential for anaerobiosis; localizes to the mitochondrial matrix and intermembrane space (IMS); homologous to APD1","termid":"PBO:0082042"}


id: MONDO:0020366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental glaucoma that results from the abnormal development of the aqueous drainage structure, characterized by an elevated intra-ocular pressure, enlargement of globe (buphthalmos), corneal edema and optic nerve cupping, and presenting clinically with the characteristic triad of epiphora, photophobia and blepharospasm.","definition_xrefs":["Orphanet:98976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary glaucoma","termid":"MONDO:0018174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital glaucoma","secondary_identifiers":["NCIT:C50648","ICD9:743.20","UMLS:C0020302","SCTID:204113001","MEDGEN:42532","MESH:D006871","ICD9:743.2","DOID:11212"],"synonyms":[{"name":"Buphthalmus","type":"exact"},{"name":"buphthalmia","type":"exact"},{"name":"buphthalmos","type":"exact"},{"name":"hydrophthalmos","type":"exact"},{"name":"primary congenital glaucoma","type":"narrow"}],"termid":"MONDO:0020366","xrefs":{"Monarch":{"xref_id":"0020366"}}}


id: MONDO:0029135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type C","termid":"MONDO:0000173"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy caused by variation in POMGNT2","termid":"MONDO:0700075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0005066","MONDO:0006025","MONDO:0024322"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 8","secondary_identifiers":["GARD:16294","MEDGEN:1648468","OMIM:618135","DOID:0112382","UMLS:C4748320"],"synonyms":[{"name":"LGMD-POMGNT2 related myopathy","type":"exact"},{"name":"MDDGC8","type":"related"},{"name":"Muscular dystrophy-dystroglycanopathy, limb-girdle, POMGNT2-related","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 24","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle) type C, 8","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), TYPE C, 8","type":"related"}],"termid":"MONDO:0029135","xrefs":{"Monarch":{"xref_id":"0029135"}}}


id: PR:O74480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1840.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.07c","synonyms":[{"name":"Spom972h-SPCC1840.07c","type":"exact"}],"termid":"PR:O74480"}


id: GO:0008270
data:
  {"annotated_genes":["SJAG_05343","SJAG_00341","SJAG_03628","SJAG_04368","SJAG_01560","SJAG_01321","SJAG_02813","SJAG_04106","SJAG_03428","SJAG_02461","SJAG_03448","SJAG_00926","SJAG_02652","SJAG_02048","SJAG_03968","SJAG_00181","SJAG_02709","SJAG_01715","SJAG_00153","SJAG_00638","SJAG_04479","SJAG_00500","SJAG_03771","SJAG_03695","SJAG_00819","SJAG_01281","SJAG_03103","SJAG_03635","SJAG_04414","SJAG_04898","SJAG_01375","SJAG_04374","SJAG_00209","SJAG_00509","SJAG_02752","SJAG_04189","SJAG_05274","SJAG_00166","SJAG_01325","SJAG_04205","SJAG_05223","SJAG_02406","SJAG_03918","SJAG_01584","SJAG_00072","SJAG_03286","SJAG_02447","SJAG_03275","SJAG_01593","SJAG_02043","SJAG_01600","SJAG_01212","SJAG_02003","SJAG_03982","SJAG_01740","SJAG_01768","SJAG_01052","SJAG_00610","SJAG_06597","SJAG_03051","SJAG_01728","SJAG_02963","SJAG_04213","SJAG_05323","SJAG_01280","SJAG_03618","SJAG_00081","SJAG_04966","SJAG_04396","SJAG_02319","SJAG_01511","SJAG_02253","SJAG_03120","SJAG_01854","SJAG_01673","SJAG_03142","SJAG_01507","SJAG_01414","SJAG_04845","SJAG_03112","SJAG_00742","SJAG_02415","SJAG_02510","SJAG_04682","SJAG_02668","SJAG_04063","SJAG_02689","SJAG_01930","SJAG_01200","SJAG_04712","SJAG_04391","SJAG_00410","SJAG_02459","SJAG_02252","SJAG_02096","SJAG_03578","SJAG_02908","SJAG_00119","SJAG_04089","SJAG_04915","SJAG_03071","SJAG_01776","SJAG_01535","SJAG_00644","SJAG_03405","SJAG_00436","SJAG_03324","SJAG_01165","SJAG_01046","SJAG_02629","SJAG_02052","SJAG_00498","SJAG_01637","SJAG_03388","SJAG_05679","SJAG_00923","SJAG_03268","SJAG_05003","SJAG_04425","SJAG_01088","SJAG_06576","SJAG_05105","SJAG_03884","SJAG_00896","SJAG_01787","SJAG_03831","SJAG_03697","SJAG_03255","SJAG_00111","SJAG_01910","SJAG_00439","SJAG_05173","SJAG_02659","SJAG_01284","SJAG_00758","SJAG_00406","SJAG_02730","SJAG_05237","SJAG_00237","SJAG_04998","SJAG_03945","SJAG_05353","SJAG_05344","SJAG_03974","SJAG_04024","SJAG_00510","SJAG_01797","SJAG_01498","SJAG_01226","SJAG_02290","SJAG_03196","SJAG_04353","SJAG_00052","SJAG_05239","SJAG_04434","SJAG_03539","SJAG_02954","SJAG_03983","SJAG_03225","SJAG_03939","SJAG_02381","SJAG_05012","SJAG_00037","SJAG_05354","SJAG_04724","SJAG_01583","SJAG_00934","SJAG_03734","SJAG_02349","SJAG_02299","SJAG_02746","SJAG_04410","SJAG_01194","SJAG_04584","SJAG_01450","SJAG_02033","SJAG_00188","SJAG_03855","SJAG_03984","SJAG_00304","SJAG_02340","SJAG_03886","SJAG_03911","SJAG_02808","SJAG_00483","SJAG_03689","SJAG_02521","SJAG_03022","SJAG_03370","SJAG_02648","SJAG_04309","SJAG_01772","SJAG_01310","SJAG_04336","SJAG_02203","SJAG_03346","SJAG_00067","SJAG_01575","SJAG_00637","SJAG_03599","SJAG_05118","SJAG_03153","SJAG_05245","SJAG_00475","SJAG_03241","SJAG_01110","SJAG_05243","SJAG_03519","SJAG_03647","SJAG_04030","SJAG_04373","SJAG_03387","SJAG_01372","SJAG_03812","SJAG_00451","SJAG_03250","SJAG_00163","SJAG_00225","SJAG_01572","SJAG_04990","SJAG_04129","SJAG_03538","SJAG_01266","SJAG_02347","SJAG_00399","SJAG_03548","SJAG_04249","SJAG_01313","SJAG_00467","SJAG_04448","SJAG_03473","SJAG_04496","SJAG_03029","SJAG_00249","SJAG_01075","SJAG_05236","SJAG_03752","SJAG_00045","SJAG_02503","SJAG_01465","SJAG_02589","SJAG_03326","SJAG_00792","SJAG_01707","SJAG_05345","SJAG_06642","SJAG_03373","SJAG_02851","SJAG_05234","SJAG_04043","SJAG_00865","SJAG_03175","SJAG_02539","SJAG_00989","SJAG_01457","SJAG_03761","SJAG_02587","SJAG_00552","SJAG_03006","SJAG_04574","SJAG_04791","SJAG_02575","SJAG_00456","SJAG_03043","SJAG_01765","SJAG_04726","SJAG_06639","SJAG_02277","SJAG_05192","SJAG_00752","SJAG_02169","SJAG_01992","SJAG_05242","SJAG_00204","SJAG_00701","SJAG_03135","SJAG_03183","SJAG_04538","SJAG_03191","SJAG_03976","SJAG_00403","SJAG_02990","SJAG_01997","SJAG_00116","SJAG_02165","SJAG_00910","SJAG_00013","SJAG_03254","SJAG_03090","SJAG_03883","SJAG_03879","SJAG_02334","SJAG_02583","SJAG_00173","SJAG_06611","SJAG_04048","SJAG_04765","SJAG_03240","SJAG_02938","SJAG_02298","SJAG_02199","SJAG_00555","SJAG_02348","SJAG_02691","SJAG_03615","SJAG_02818","SJAG_01533","SJAG_03613","SJAG_04768","SJAG_04407","SJAG_00527","SJAG_04429","SJAG_00124","SJAG_02956","SJAG_04533","SJAG_02569","SJAG_05337","SJAG_00664","SJAG_00727","SJAG_04151","SJAG_03230","SJAG_02149","SJAG_01253","SJAG_03840","SJAG_01523","SJAG_03005","SJAG_03665","SJAG_04619","SJAG_04991","SJAG_01179","SJAG_00561","SJAG_03657","SJAG_02007","SJAG_05273","SJAG_00577","SJAG_05264","SJAG_03430","SJAG_02138","SJAG_00386","SJAG_06599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56976,57071,57120,57154,57173,57222,57330,57335,57407,57550,57627,57666,57731,57761,57772,57814,57859,57991,58286,58295,58396,58404,58497,58532,58594,58694,58773,58838,58876,58913,58949,59019,59031,59139,59279,59358,59413,59437,59544,59676,59723,59741,59921,59949,59960,59972,60165,60176,60363,60364,60544,60560,60564,60588,60674,60697,60720,60728,60803,60814,60866,60918,60979,60999,61016,61122,61246,61326,61334,61397,61417,61421,61422,61440,61499,61504,61560,61646,61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id: PBO:0052765
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 57","termid":"PBO:0052765"}


id: MONDO:0008634
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"urticaria, familial localized heat","secondary_identifiers":["MEDGEN:395922","OMIM:191950","MESH:C566011","UMLS:C1860551"],"synonyms":[{"name":"urticaria, familial localized heat","type":"exact"}],"termid":"MONDO:0008634","xrefs":{"Monarch":{"xref_id":"0008634"}}}


id: PBO:0044631
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin like kinase 2","termid":"PBO:0044631"}


id: GO:0003875
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: H2O + N(omega)-(ADP-D-ribosyl)-L-arginyl-[protein] = ADP-D-ribose + L-arginyl-[protein], and H2O + N(omega)-(ADP-D-ribosyl)-L-arginine = ADP-D-ribose + L-arginine.","definition_xrefs":["EC:3.2.2.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"ADP-ribosylarginine hydrolase activity","synonyms":[{"name":"ADP-ribose-L-arginine cleavage enzyme activity","type":"related"},{"name":"ADP-ribose-L-arginine cleaving enzyme activity","type":"related"},{"name":"ADPribosylarginine hydrolase activity","type":"exact"},{"name":"N(omega)-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity","type":"related"},{"name":"nomega-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity","type":"related"},{"name":"omega-protein-N-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity","type":"related"},{"name":"protein ADP-ribosylarginine hydrolase activity","type":"related"},{"name":"protein-nomega-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity","type":"related"}],"termid":"GO:0003875"}


id: PBO:0015653
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-level_fluctuates_during","termid":"PBO:0015653"}


id: PBO:0065908
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab9 effector protein with kelch motifs pseudogene 1","termid":"PBO:0065908"}


id: MONDO:0020381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A macular degeneration characterized by abnormal accumulation of lipofuscin in the retinal pigment epithelium in a distinct pattern, patterns include; reticular ('fishnet-like'), macroreticular ('spider-shaped'), and butterfly-shaped.","definition_xrefs":["DOID:0060863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned macular dystrophy","secondary_identifiers":["ICD10CM:H35.5","SCTID:725590001","OMIMPS:169150"],"synonyms":[{"name":"macular dystrophy, patterned","type":"exact"},{"name":"patterned dystrophy of retinal pigment epithelium","type":"exact"}],"termid":"MONDO:0020381","xrefs":{"Monarch":{"xref_id":"0020381"}}}


id: GO:0032700
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:mah","PMID:16482511","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"negatively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17 production","secondary_identifiers":["GO:0045379","GO:1905077"],"synonyms":[{"name":"down regulation of interleukin-17 production","type":"exact"},{"name":"downregulation of interleukin-17 production","type":"exact"},{"name":"inhibition of interleukin-17 production","type":"narrow"},{"name":"negative regulation of CTLA-8 production","type":"narrow"},{"name":"negative regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"negative regulation of IL-17 production","type":"exact"},{"name":"negative regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032700"}


id: MONDO:0006458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Also known as well-differentiated thymic carcinoma, atypical thymoma, or epithelial thymoma, this type of thymoma displays morphologic characteristics of a well-differentiated carcinoma. The majority of cases occur in the anterior mediastinum as Masaoka stage II or stage III tumors. It is almost always invasive, it recurs frequently, and metastasizes in approximately 20% of the cases.","definition_xrefs":["NCIT:C7997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma type B","termid":"MONDO:0016974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymoma type B3","secondary_identifiers":["EFO:1000583","UMLS:C0279705","ICDO:8585/1","ICDO:8585/3","MEDGEN:124648","DOID:7926"],"synonyms":[{"name":"atypical thymoma","type":"exact"},{"name":"epithelial malignant thymoma","type":"exact"},{"name":"epithelial thymoma","type":"exact"},{"name":"malignant thymoma type B3","type":"exact"},{"name":"squamoid thymoma","type":"exact"},{"name":"thymoma type B3","type":"exact"},{"name":"thymoma, epithelial","type":"exact"},{"name":"well differentiated thymic carcinoma","type":"exact"},{"name":"well-differentiated thymic carcinoma","type":"exact"}],"termid":"MONDO:0006458","xrefs":{"Monarch":{"xref_id":"0006458"}}}


id: MONDO:0018180
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal scarlet fever","secondary_identifiers":["ICD10CM:A38","icd11.foundation:449652676","Orphanet:36235","UMLS:C5848379","MEDGEN:1853264","GARD:18819"],"termid":"MONDO:0018180","xrefs":{"Monarch":{"xref_id":"0018180"}}}


id: PBO:0030794
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization_in_prospore","termid":"PBO:0030794"}


id: MONDO:0016335
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial disease with dilated cardiomyopathy (obsolete MONDO:0016335)","secondary_identifiers":["Orphanet:217613"],"termid":"MONDO:0016335","xrefs":{"Monarch":{"xref_id":"0016335"}}}


id: PBO:0062137
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 4","termid":"PBO:0062137"}


id: MONDO:0029042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ureteropelvic junction obstruction (obsolete MONDO:0029042)","secondary_identifiers":["DOID:0111145"],"termid":"MONDO:0029042","xrefs":{"Monarch":{"xref_id":"0029042"}}}


id: GO:0004822
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id: PR:O94634
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonine dehydratase biosynthetic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03919","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine dehydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1677.03c","secondary_identifiers":["UniProtKB:O94634"],"synonyms":[{"name":"Spom972h-ilvA","type":"exact"},{"name":"threonine deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94634"}


id: GO:0017170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to Ku70, a protein involved in non-homologous DNA end joining.","definition_xrefs":["PMID:14739985","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete KU70 binding (obsolete GO:0017170)","synonyms":[{"name":"KU70 binding","type":"exact"}],"termid":"GO:0017170"}


id: FYPO:0005720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is normal (i.e. indistinguishable from wild type) during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PMID:17881496","PomBase:mah","GO:1990942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic metaphase chromosome recapture","synonyms":[{"name":"normal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"normal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"normal mitotic kinetochore retrieval","type":"exact"},{"name":"normal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"normal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005720"}


id: PBO:0067459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 584, pseudogene","termid":"PBO:0067459"}


id: PBO:0062461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 148 pseudogene","termid":"PBO:0062461"}


id: GO:0006850
data:
  {"annotated_genes":["SJAG_01924","SJAG_04593"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63697,78611],"is_not":false,"summary":null,"term":"GO:0006850"}]},"cv_name":"biological_process","definition":"The process in which pyruvate is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["GOC:vw","PMID:22628558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"is_a","term_name":"pyruvate transmembrane transport","termid":"GO:1901475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"pyruvate import into mitochondria","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:1902361"],"synonyms":[{"name":"mitochondrial pyruvate transport","type":"related"},{"name":"pyruvate membrane transport in mitochondria","type":"related"},{"name":"pyruvate membrane transport in mitochondrion","type":"related"},{"name":"pyruvate transmembrane transport in mitochondria","type":"related"},{"name":"pyruvate transmembrane transport in mitochondrion","type":"related"}],"termid":"GO:0006850","terms_by_termid":{"GO:0006850":null}}


id: PBO:0079225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 3 pseudogene 1","termid":"PBO:0079225"}


id: PBO:0088449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein insertion complex subunit Tim54","termid":"PBO:0088449"}


id: GO:1990452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex containing Parkin (PARK2), the F-box protein FBXW7 (also called SEL-10) and a cullin from the Cul1 subfamily; substrate specificity is conferred by the F-box protein.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:12628165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Parkin-FBXW7-Cul1 ubiquitin ligase complex","synonyms":[{"name":"PRKN-FBXW7-Cul1 complex","type":"exact"},{"name":"Park2-FBXW7-Cul1 complex","type":"exact"},{"name":"Parkin-FBXW7-Cul1 protein complex","type":"exact"},{"name":"Parkin-HSel-10-Cullin-1 complex","type":"narrow"},{"name":"Parkin/Cul1/F-box protein complex","type":"exact"}],"termid":"GO:1990452"}


id: PBO:0005219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L12.1/L12A","termid":"PBO:0005219"}


id: PBO:0057429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-2","termid":"PBO:0057429"}


id: GO:1905087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bioluminescence.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:10913092","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of bioluminescence","termid":"GO:1905085"},{"relation_name":"positively_regulates","term_name":"bioluminescence","termid":"GO:0008218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bioluminescence","synonyms":[{"name":"activation of bioluminescence","type":"narrow"},{"name":"up regulation of bioluminescence","type":"exact"},{"name":"up-regulation of bioluminescence","type":"exact"},{"name":"upregulation of bioluminescence","type":"exact"}],"termid":"GO:1905087"}


id: MONDO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital disorder characterized by partial or complete absence of melanin pigment in the eyes, hair, or skin.","definition_xrefs":["NCIT:C84543-modified"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic skin disease (obsolete MONDO:0024255)","termid":"MONDO:0024255"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"albinism","secondary_identifiers":["GARD:5768","NCIT:C84543","ICD10CM:E70.3","MEDGEN:182","MESH:D000417","SCTID:15890002","UMLS:C0001916"],"synonyms":[{"name":"albinism","type":"exact"}],"termid":"MONDO:0043209","xrefs":{"Monarch":{"xref_id":"0043209"}}}


id: PBO:0086499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane phosphatase; involved in the general stress response and inactivating dephosphorylation of Mep2p; required along with Psr1p and binding partner Whi2p for full activation of STRE-mediated gene expression, possibly through Msn2p dephosphorylation, and for inhibition of TORC1 in response to limiting amino acids; regulates the sodium ion stress response with Psr1p; member of the HAD family of protein phosphatases","termid":"PBO:0086499"}


id: GO:0102831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = stachyose + sucrose.","definition_xrefs":["GOC:pz","PMID:12060258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"stachyose synthase activity","secondary_identifiers":["MetaCyc:RXN-8287"],"termid":"GO:0102831"}


id: GO:0016918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"retinal binding","synonyms":[{"name":"UV-sensitive opsin","type":"related"},{"name":"blue-sensitive opsin","type":"related"},{"name":"green-sensitive opsin","type":"related"},{"name":"long-wave-sensitive opsin","type":"related"},{"name":"opsin","type":"related"},{"name":"red-sensitive opsin","type":"related"},{"name":"retinaldehyde binding","type":"exact"},{"name":"short-wave-sensitive opsin","type":"related"},{"name":"violet-sensitive opsin","type":"related"},{"name":"vitamin A binding","type":"broad"}],"termid":"GO:0016918"}


id: PBO:0081699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 621","termid":"PBO:0081699"}


id: FYPO:0004694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA is broken into small fragments when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah","PMID:12963726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented DNA during stationary phase","synonyms":[{"name":"DNA fragmentation during stationary phase","type":"exact"},{"name":"fragmented nucleus during stationary phase","type":"related"}],"termid":"FYPO:0004694"}


id: GO:0047096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + androst-4-ene-3,17-dione + O2 = A + H2O + testololactone.","definition_xrefs":["EC:1.14.99.12","RHEA:22696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 17-alpha-monooxygenase activity","termid":"GO:0004508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"androst-4-ene-3,17-dione monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.99.12-RXN","KEGG_REACTION:R01833"],"synonyms":[{"name":"4-androstene-3,17-dione monooxygenase activity","type":"exact"},{"name":"androst-4-ene-3,17-dione 17-oxidoreductase activity","type":"related"},{"name":"androst-4-ene-3,17-dione hydroxylase activity","type":"related"},{"name":"androst-4-ene-3,17-dione-hydrogen-donor:oxygen oxidoreductase (13-hydroxylating, lactonizing)","type":"related"},{"name":"androstene-3,17-dione hydroxylase activity","type":"exact"},{"name":"androstenedione monooxygenase activity","type":"related"}],"termid":"GO:0047096"}


id: PBO:0048504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 5","termid":"PBO:0048504"}


id: CHEBI:15379
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxygen","termid":"CHEBI:15379"}


id: MONDO:0001435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"bullous retinoschisis","secondary_identifiers":["SCTID:65545003","UMLS:C0344289","DOID:12108","MEDGEN:576202","ICD9:361.12"],"termid":"MONDO:0001435","xrefs":{"Monarch":{"xref_id":"0001435"}}}


id: PBO:0053786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1037","termid":"PBO:0053786"}


id: PBO:0056941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-1 host gene","termid":"PBO:0056941"}


id: PBO:0045384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase like 6","termid":"PBO:0045384"}


id: GO:0010932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of macrophage tolerance induction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"macrophage tolerance induction","termid":"GO:0010931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage tolerance induction","termid":"GO:0010932"}


id: PBO:0089189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional proteasome assembly, lid subcomplex subunit Rpn15/Dss1","termid":"PBO:0089189"}


id: PBO:0058265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4643","termid":"PBO:0058265"}


id: GO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of dopamine. from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dos","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, dopaminergic","synonyms":[{"name":"dopaminergic synaptic transmission","type":"exact"}],"termid":"GO:0001963"}


id: MONDO:0006394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid neoplasm that arises from the glandular epithelium of the rectal mucosa. It is characterized by a tubular architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C96477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"},{"relation_name":"is_a","term_name":"tubular adenoma","termid":"MONDO:0024660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal tubular adenoma","secondary_identifiers":["MEDGEN:474437","EFO:1000504","UMLS:C3272804"],"synonyms":[{"name":"rectal tubular adenoma","type":"exact"}],"termid":"MONDO:0006394","xrefs":{"Monarch":{"xref_id":"0006394"}}}


id: MONDO:0003363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the dermis.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"malignant dermis tumor","secondary_identifiers":["DOID:5274","UMLS:C0346811","SCTID:255096006","NCIT:C4574","MEDGEN:87564"],"synonyms":[{"name":"cancer of dermis","type":"exact"},{"name":"dermis cancer","type":"exact"},{"name":"malignant dermal neoplasm","type":"exact"},{"name":"malignant dermis neoplasm","type":"exact"},{"name":"malignant dermis tumor","type":"exact"},{"name":"malignant neoplasm of dermis","type":"exact"},{"name":"malignant neoplasm of the dermis","type":"exact"},{"name":"malignant tumor of dermis","type":"exact"},{"name":"malignant tumor of the dermis","type":"exact"},{"name":"malignant tumour of dermis","type":"exact"},{"name":"malignant tumour of the dermis","type":"exact"}],"termid":"MONDO:0003363","xrefs":{"Monarch":{"xref_id":"0003363"}}}


id: MONDO:0021562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the umbilical cord stump in newborns.","definition_xrefs":["NCIT:C116008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalitis","secondary_identifiers":["UMLS:C0028992","SCTID:239095007","GTR:AN0533760","MEDGEN:508000"],"synonyms":[{"name":"Omphalitis","type":"related"},{"name":"omphalitis","type":"exact"}],"termid":"MONDO:0021562","xrefs":{"Monarch":{"xref_id":"0021562"}}}


id: GO:0030590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs during the first cell cycle in an embryo, in which anterior cortical contractions culminate in a single partial constriction of the embryo called the pseudocleavage furrow. An example of this process is found in nematode worms.","definition_xrefs":["PMID:7729583","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"first cell cycle pseudocleavage","termid":"GO:0030590"}


id: MONDO:0009546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrosomia adiposa congenita","secondary_identifiers":["MESH:C565425","OMIM:248100","MEDGEN:340875","UMLS:C1855468"],"synonyms":[{"name":"macrosomia adiposa congenita","type":"exact"}],"termid":"MONDO:0009546","xrefs":{"Monarch":{"xref_id":"0009546"}}}


id: PBO:0069660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 937, pseudogene","termid":"PBO:0069660"}


id: PBO:0087473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs","termid":"PBO:0087473"}


id: MONDO:1010459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"cardiomyopathy, domestic cat","termid":"MONDO:1010442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, domestic cat","secondary_identifiers":["OMIA:000515-9685"],"termid":"MONDO:1010459","xrefs":{"Monarch":{"xref_id":"1010459"}}}


id: GO:0099517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicles along microtubules within a cell, powered by molecular motors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"synaptic vesicle cytoskeletal transport","termid":"GO:0099514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}


id: MOD:01726
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01726"}


id: GO:2000889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellodextrin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellodextrin metabolic process","synonyms":[{"name":"cellodextrin metabolism","type":"exact"}],"termid":"GO:2000889"}


id: GO:0004105
data:
  {"annotated_genes":["SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71544],"is_not":false,"summary":null,"term":"GO:0004105"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline.","definition_xrefs":["EC:2.7.7.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:18997","Reactome:R-HSA-1483081","MetaCyc:2.7.7.15-RXN"],"synonyms":[{"name":"CDP-choline pyrophosphorylase activity","type":"related"},{"name":"CDP-choline synthetase activity","type":"related"},{"name":"CTP-phosphocholine cytidylyltransferase activity","type":"related"},{"name":"CTP:choline-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:phosphocholine cytidylyltransferase activity","type":"related"},{"name":"CTP:phosphorylcholine cytidylyltransferase activity","type":"related"},{"name":"choline phosphate cytidylyltransferase activity","type":"related"},{"name":"cytidine diphosphocholine pyrophosphorylase activity","type":"related"},{"name":"phosphocholine cytidylyltransferase activity","type":"related"},{"name":"phosphorylcholine cytidylyltransferase activity","type":"related"},{"name":"phosphorylcholine transferase activity","type":"related"},{"name":"phosphorylcholine:CTP cytidylyltransferase activity","type":"related"}],"termid":"GO:0004105","terms_by_termid":{"GO:0004105":null}}


id: PBO:0055283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2710","termid":"PBO:0055283"}


id: MONDO:0010676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Hemizygous lethal type","secondary_identifiers":["MESH:C564097","MEDGEN:326552","UMLS:C1839671","OMIM:309950"],"synonyms":[{"name":"muscular dystrophy, Hemizygous lethal type","type":"exact"}],"termid":"MONDO:0010676","xrefs":{"Monarch":{"xref_id":"0010676"}}}


id: GO:0000966
data:
  {"annotated_genes":["SJAG_06613","SJAG_00195","SJAG_04224","SJAG_04006","SJAG_03901","SJAG_04767","SJAG_01724","SJAG_01713","SJAG_04582","SJAG_00772","SJAG_04233","SJAG_01623","SJAG_04527","SJAG_02250","SJAG_04488","SJAG_00955","SJAG_04034","SJAG_03796","SJAG_04524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[77174,74027,70155,109505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[103961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[74593,79652,72028,110824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"},{"annotations":[109268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000465"},{"annotations":[60380],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"},{"annotations":[97179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000967"},{"annotations":[61852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099116"},{"annotations":[59575,60946,81123,72899,100261,65467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001682"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00772":null,"SJAG_00955":null,"SJAG_01623":null,"SJAG_01713":null,"SJAG_01724":null,"SJAG_02250":null,"SJAG_03796":null,"SJAG_03901":null,"SJAG_04006":null,"SJAG_04034":null,"SJAG_04224":null,"SJAG_04233":null,"SJAG_04488":null,"SJAG_04524":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04767":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA 5' end processing","type":"exact"}],"termid":"GO:0000966","terms_by_termid":{"GO:0000465":null,"GO:0000472":null,"GO:0000967":null,"GO:0001682":null,"GO:0006370":null,"GO:0036261":null,"GO:0099116":null,"GO:0106005":null,"GO:0106410":null}}


id: MONDO:0011775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nasopharyngeal carcinoma in which the cause of the disease is a mutation in the TP53 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nasopharyngeal carcinoma","termid":"MONDO:0015459"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal carcinoma, susceptibility to, 1","secondary_identifiers":["MEDGEN:339597","UMLS:C1846758","OMIM:607107"],"synonyms":[{"name":"NPC","type":"related"},{"name":"Npca","type":"related"},{"name":"TP53 nasopharyngeal carcinoma","type":"exact"},{"name":"nasopharyngeal cancer","type":"related"},{"name":"nasopharyngeal carcinoma","type":"related"},{"name":"nasopharyngeal carcinoma 1","type":"exact"},{"name":"nasopharyngeal carcinoma caused by mutation in TP53","type":"exact"},{"name":"nasopharyngeal carcinoma, somatic","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0011775","xrefs":{"Monarch":{"xref_id":"0011775"}}}


id: FYPO:0000600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuolar transport begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of vacuolar transport","synonyms":[{"name":"delayed onset of vacuolar protein transport","type":"narrow"},{"name":"delayed onset of vacuolar transport during mitotic cell cycle","type":"related"},{"name":"delayed onset of vacuolar transport during vegetative growth","type":"exact"},{"name":"delayed vacuolar transport","type":"exact"},{"name":"vacuolar transport: delayed","type":"related"}],"termid":"FYPO:0000600"}


id: GO:0019694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"alkanesulfonate metabolic process","secondary_identifiers":["MetaCyc:ALKANEMONOX-PWY"],"synonyms":[{"name":"alkanesulfonate metabolism","type":"exact"},{"name":"alkanesulphonate metabolic process","type":"exact"},{"name":"alkanesulphonate metabolism","type":"exact"}],"termid":"GO:0019694"}


id: MOD:01132
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01165. Remap to MOD:01165.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01132 5'phos Adenosinyl (obsolete MOD:01132)","termid":"MOD:01132"}


id: GO:0160272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-end 2',3'-cyclophospho-ribonucleotide-RNA + 2 H2O = a 3'-end ribonucleotide-RNA + phosphate + H+.","definition_xrefs":["PMID:32732418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140098","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"RNA 2',3'-cyclic phosphatase activity","termid":"GO:0160272"}


id: GO:0010194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving microRNA, a large family of 21-22 nucleotide non-coding RNAs with presumed post-transcriptional regulatory activity.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete microRNA metabolic process (obsolete GO:0010194)","synonyms":[{"name":"microRNA metabolic process","type":"exact"}],"termid":"GO:0010194"}


id: PBO:0003780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine transporter Can1","termid":"PBO:0003780"}


id: GO:0060413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which atrial septum is generated and organized. The atrial septum separates the upper chambers (the atria) of the heart from one another.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum morphogenesis","secondary_identifiers":["GO:0003287"],"synonyms":[{"name":"interatrial septum morphogenesis","type":"exact"}],"termid":"GO:0060413"}


id: PR:P87233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- phf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWM histone demethylase complex subunit phf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.07c","synonyms":[{"name":"PHD finger domain-containing protein phf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-phf1","type":"exact"}],"termid":"PR:P87233"}


id: PBO:0073880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 7","termid":"PBO:0073880"}


id: PBO:0066889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 189","termid":"PBO:0066889"}


id: GO:0120211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of proacrosomal vesicle with the membrane of another proacrosomal vesicle to form the acrosome.","definition_xrefs":["PMID:29991750","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"acrosome assembly","termid":"GO:0001675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0044085","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"proacrosomal vesicle fusion","termid":"GO:0120211"}


id: PBO:0065160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated non-coding RNA 1","termid":"PBO:0065160"}


id: MONDO:0020633
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"anaplastic cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:231373","UMLS:C1332287","NCIT:C36025"],"synonyms":[{"name":"anaplastic malignant neoplasm","type":"exact"}],"termid":"MONDO:0020633","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020633"}}}


id: MONDO:0012919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the HNF1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 20","secondary_identifiers":["MEDGEN:382706","DOID:0110757","MESH:C567286","OMIM:612520","UMLS:C2675866"],"synonyms":[{"name":"HNF1A type 1 diabetes mellitus","type":"exact"},{"name":"IDDM20","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 20","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 20","type":"exact"},{"name":"insulin-dependent diabetes mellitus 20","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in HNF1A","type":"exact"}],"termid":"MONDO:0012919","xrefs":{"Monarch":{"xref_id":"0012919"}}}


id: MONDO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lymphoma that arises from the trachea. Signs and symptoms include dyspnea, cough, wheezing, and stridor.","definition_xrefs":["NCIT:C6248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal cancer","termid":"MONDO:0001407"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"tracheal lymphoma","secondary_identifiers":["UMLS:C1336773","DOID:12001","MEDGEN:277825"],"synonyms":[{"name":"lymphoma of the trachea","type":"exact"},{"name":"lymphoma of trachea","type":"exact"},{"name":"primary tracheal lymphoma","type":"exact"},{"name":"trachea lymphoma","type":"exact"},{"name":"tracheal lymphoma","type":"exact"}],"termid":"MONDO:0001417","xrefs":{"Monarch":{"xref_id":"0001417"}}}


id: PBO:0031503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_actinomycin_D","termid":"PBO:0031503"}


id: GO:0070258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane structure formed of two closely aligned lipid bilayers that lie beneath the plasma membrane and form part of the pellicle surrounding an apicomplexan parasite cell.","definition_xrefs":["PMID:12456714","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pellicle","termid":"GO:0020039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inner membrane pellicle complex","synonyms":[{"name":"inner membrane complex","type":"broad"}],"termid":"GO:0070258"}


id: FYPO:0003913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a lower frequency than normal during the vegetative growth phase of the life cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased minichromosome loss during vegetative growth","synonyms":[{"name":"decreased minichromosome loss during mitotic cell cycle","type":"related"},{"name":"reduced minichromosome loss during vegetative growth","type":"exact"}],"termid":"FYPO:0003913"}


id: PR:Q9HGK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A homologous-pairing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15938:SF0","OMA:SCHPO00387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous-pairing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.15","secondary_identifiers":["UniProtKB:Q9HGK2"],"synonyms":[{"name":"Spom972h-PSMC3IP","type":"exact"},{"name":"meiotic expression up-regulated protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGK2"}


id: MONDO:0013319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 4","termid":"MONDO:0016955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4Q32.1-q32.2 triplication syndrome","secondary_identifiers":["MEDGEN:462207","OMIM:613603","UMLS:C3150857"],"synonyms":[{"name":"chromosome 4Q32.1-q32.2 triplication syndrome","type":"exact"}],"termid":"MONDO:0013319","xrefs":{"Monarch":{"xref_id":"0013319"}}}


id: PBO:0061562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 4","termid":"PBO:0061562"}


id: PBO:0084117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084117"}


id: GO:0010200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chitin","termid":"GO:0010200"}


id: MONDO:1010215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial adenomatous polyposis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis, non-human animal","secondary_identifiers":["OMIA:001916"],"termid":"MONDO:1010215","xrefs":{"Monarch":{"xref_id":"1010215"}}}


id: MONDO:0011981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune thyroid disease, susceptibility to","termid":"MONDO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune thyroid disease, susceptibility to, 2","secondary_identifiers":["MEDGEN:334159","OMIM:608174","UMLS:C1842445"],"synonyms":[{"name":"AITD2","type":"related"},{"name":"autoimmune thyroid disease, susceptibility to, 2","type":"exact"},{"name":"autoimmune thyroid disease, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0011981","xrefs":{"Monarch":{"xref_id":"0011981"}}}


id: PBO:0035935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_microtubule_during_mitotic_interphase","termid":"PBO:0035935"}


id: PBO:0040262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 16 like 1","termid":"PBO:0040262"}


id: GO:0160196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a di-trans,poly-cis-polyprenol + NAD+ = a di-trans,poly-cis-polyprenal + NADH + H+.","definition_xrefs":["PMID:38821050","RHEA:80719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"polyprenol dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-9937298","MetaCyc:RXN-24567"],"synonyms":[{"name":"polyprenol dehydrogenase activity","type":"broad"}],"termid":"GO:0160196"}


id: PBO:0028230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_cellular_response_to_oxidative_stress","termid":"PBO:0028230"}


id: PBO:0046208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C","termid":"PBO:0046208"}


id: PBO:0034186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcribed_to","termid":"PBO:0034186"}


id: PBO:0044229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 3","termid":"PBO:0044229"}


id: GO:0100067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway process that positively_regulates spinal cord association neuron differentiation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spinal cord association neuron differentiation by canonical Wnt signaling pathway (obsolete GO:0100067)","termid":"GO:0100067"}


id: PBO:0084275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; required for the fusion of ER-derived COPII transport vesicles with the Golgi; interacts with Yip1p and Yos1p; localizes to the Golgi, the ER, and COPII vesicles; homolog of human YIPF3","termid":"PBO:0084275"}


id: PBO:0042435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 42","termid":"PBO:0042435"}


id: PBO:0080059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 29","termid":"PBO:0080059"}


id: PBO:0091260
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae TUP1","termid":"PBO:0091260"}


id: PBO:0064187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA pseudogene 1","termid":"PBO:0064187"}


id: GO:0031750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a D3 dopamine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine receptor binding","termid":"GO:0050780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"D3 dopamine receptor binding","synonyms":[{"name":"D3 dopamine receptor ligand","type":"narrow"}],"termid":"GO:0031750"}


id: PBO:0068794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 31, pseudogene","termid":"PBO:0068794"}


id: MONDO:1011146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia that occurs in water buffalo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achondroplasia, non-human animal","termid":"MONDO:1010291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achondroplasia, water buffalo","secondary_identifiers":["OMIA:000004-89462"],"termid":"MONDO:1011146","xrefs":{"Monarch":{"xref_id":"1011146"}}}


id: PBO:0071968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B1","termid":"PBO:0071968"}


id: MONDO:0030025
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87127],"is_not":false,"summary":null,"term":"MONDO:0030025"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, microcephaly, and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394312","MEDGEN:1710110","OMIM:618862"],"synonyms":[{"name":"NEDHYMS","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, MICROCEPHALY, AND SEIZURES","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia, microcephaly, and seizures","type":"exact"}],"termid":"MONDO:0030025","terms_by_termid":{"MONDO:0030025":null},"xrefs":{"Monarch":{"xref_id":"0030025"}}}


id: MONDO:1011222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment, non-human animal","termid":"MONDO:1010321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, domestic cat","secondary_identifiers":["OMIA:000275-9685"],"termid":"MONDO:1011222","xrefs":{"Monarch":{"xref_id":"1011222"}}}


id: PBO:0039700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inhibitor 5 pseudogene 1","termid":"PBO:0039700"}


id: MONDO:0025028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral disease caused by at least two distinct species (serotypes) in the vesiculovirus genus: vesicular stomatitis indiana virus and vesicular stomatitis new jersey virus. It is characterized by vesicular eruptions on the oral mucosa in cattle, horses, pigs, and other animals. In humans, vesicular stomatitis causes an acute influenza-like illness.","definition_xrefs":["MESH:D054243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabdoviridae infectious disease, non-human animal","termid":"MONDO:0700072"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"mouth mucosa disorder, non-human animal","termid":"MONDO:1011334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicular stomatitis","secondary_identifiers":["SCTID:36921006"],"synonyms":[{"name":"Stomatitides, vesicular","type":"related"},{"name":"stomatitis, vesicular","type":"related"},{"name":"vesicular Stomatitides","type":"related"}],"termid":"MONDO:0025028","xrefs":{"Monarch":{"xref_id":"0025028"}}}


id: CHEBI:22907
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleomycin","termid":"CHEBI:22907"}


id: GO:1904312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold(3+) stimulus.","definition_xrefs":["GO_REF:0000071","PMID:16206274","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"},{"relation_name":"is_a","term_name":"response to gold(3+)","termid":"GO:1904311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gold(3+)","termid":"GO:1904312"}


id: GO:1903084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a condensed nuclear chromosome.","definition_xrefs":["GOC:TermGenie","PMID:12707312","GOC:kmv","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"},{"relation_name":"is_a","term_name":"protein localization to condensed chromosome","termid":"GO:1903083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to condensed nuclear chromosome","synonyms":[{"name":"protein localisation in condensed nuclear chromosome","type":"exact"},{"name":"protein localisation to condensed nuclear chromosome","type":"exact"},{"name":"protein localization in condensed nuclear chromosome","type":"exact"}],"termid":"GO:1903084"}


id: PBO:0040510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 1A","termid":"PBO:0040510"}


id: MONDO:0012774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"15q13.3 microdeletion (microdel15q13.3) syndrome is characterized by a wide spectrum of neurodevelopmental disorders with no or subtle dysmorphic features.","definition_xrefs":["Orphanet:199318"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"chromosome 15q13.3 microdeletion syndrome","secondary_identifiers":["MEDGEN:393784","DOID:0060394","SCTID:699254009","GARD:10296","UMLS:C2677613","MESH:C567439","DECIPHER:74","OMIM:612001"],"synonyms":[{"name":"15q13.3 microdeletion","type":"related"},{"name":"15q13.3 microdeletion syndrome","type":"exact"},{"name":"Del(15)(q13.3)","type":"exact"},{"name":"chromosome 15q13.3 deletion syndrome","type":"related"},{"name":"chromosome 15q13.3 microdeletion syndrome","type":"exact"},{"name":"microdeletion 15q13.3 syndrome","type":"related"},{"name":"monosomy 15q13.3","type":"exact"}],"termid":"MONDO:0012774","xrefs":{"Monarch":{"xref_id":"0012774"}}}


id: GO:0008465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NAD+ = 3-hydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxypyruvate reductase [NAD(P)H] activity","termid":"GO:0016618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxypyruvate reductase (NADH) activity","secondary_identifiers":["MetaCyc:GLYCERATE-DEHYDROGENASE-RXN","RHEA:17905"],"synonyms":[{"name":"glycerate dehydrogenase (NAD+) activity","type":"exact"},{"name":"glycerate dehydrogenase activity","type":"broad"},{"name":"hydroxypyruvate dehydrogenase activity","type":"broad"}],"termid":"GO:0008465"}


id: GO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in the aorta and responding to the input via central nervous system control.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback","synonyms":[{"name":"aortic arch baroreceptor control of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003026"}


id: MONDO:0011464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 11 (SCA11) is a subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by the early-onset of cerebellar signs, eye movement abnormalities and pyramidal signs.","definition_xrefs":["Orphanet:98767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 11","secondary_identifiers":["MEDGEN:346799","UMLS:C1858351","MESH:C565772","SCTID:719207000","DOID:0050961","GARD:10475","icd11.foundation:743674840","OMIM:604432"],"synonyms":[{"name":"SCA11","type":"exact"},{"name":"spinocerebellar ataxia 11","type":"related"},{"name":"spinocerebellar ataxia type 11","type":"exact"}],"termid":"MONDO:0011464","xrefs":{"Monarch":{"xref_id":"0011464"}}}


id: GO:0140943
data:
  {"annotated_genes":["SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118866],"is_not":false,"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl(20)-[histone H4] + 3 S-adenosyl-L-methionine = 3 H+ + N(6),N(6),N(6)-trimethyl-L-lysyl(20)-[histone H4] + 3 S-adenosyl-L-homocysteine. This reaction is the addition of three methyl groups to the lysine residue at position 20 of the histone H4 protein, producing histone H4K20me3.","definition_xrefs":["RHEA:64456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016741","GO:0008276","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H4K20 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.372"],"synonyms":[{"name":"histone H4K20 trimethylase activity","type":"exact"},{"name":"histone H4K20 trimethylation","type":"exact"},{"name":"histone lysine N-trimethyltransferase activity (H4-K20 specific)","type":"exact"}],"termid":"GO:0140943","terms_by_termid":{"GO:0140943":null}}


id: MONDO:0018978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"immunoglobulin G4-related sclerosing disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IgG4-related mediastinitis","secondary_identifiers":["MedDRA:10027074","MESH:C536136","GARD:8337","Orphanet:63999","icd11.foundation:791747341","NORD:1146","icd11.foundation:123840075","UMLS:C0264573","MEDGEN:82683"],"synonyms":[{"name":"Fibrosing Mediastinitis","type":"exact"},{"name":"fibrosing mediastinitis","type":"exact"},{"name":"idiopathic mediastinal fibrosis","type":"related"},{"name":"mediastinal fibrosis","type":"exact"},{"name":"sclerosing mediastinitis","type":"exact"}],"termid":"MONDO:0018978","xrefs":{"Monarch":{"xref_id":"0018978"}}}


id: PATO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A limited, often assigned period of activity.","definition_xrefs":["answers.com:answers.com"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000167 bouts (obsolete PATO:0000167)","termid":"PATO:0000167"}


id: MONDO:0003083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare slow growing benign tumor of aberrant and ectatic venous connections.","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venous hemangioma","secondary_identifiers":["ICDO:9122/0","SCTID:403968005","DOID:467","MEDGEN:90801","NCIT:C4296","ICD9:228.09","UMLS:C0334532"],"synonyms":[{"name":"Venous angioma","type":"exact"},{"name":"Venous malformation","type":"exact"}],"termid":"MONDO:0003083","xrefs":{"Monarch":{"xref_id":"0003083"}}}


id: GO:0031104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of dendrites in response to their loss or damage.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"},{"relation_name":"is_a","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite regeneration","termid":"GO:0031104"}


id: PBO:0047008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A11, pseudogene","termid":"PBO:0047008"}


id: MONDO:1011063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"renal hypoplasia, non-human animal","termid":"MONDO:1010264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal hypoplasia, chicken","secondary_identifiers":["OMIA:000854-9031"],"termid":"MONDO:1011063","xrefs":{"Monarch":{"xref_id":"1011063"}}}


id: GO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"regulation of APP biosynthesis","type":"exact"},{"name":"regulation of APP biosynthetic process","type":"exact"},{"name":"regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"regulation of amyloid precursor protein formation","type":"exact"},{"name":"regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042984"}


id: PBO:0072618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSPH1 divergent transcript","termid":"PBO:0072618"}


id: PATO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000975 absolute porosity (obsolete PATO:0000975)","termid":"PATO:0000975"}


id: PBO:0024864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA modification, acetylated cytidines","termid":"PBO:0024864"}


id: PBO:0069307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 563, pseudogene","termid":"PBO:0069307"}


id: PBO:0072354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 40","termid":"PBO:0072354"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: PBO:0064454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pogo transposable element derived with KRAB domain","termid":"PBO:0064454"}


id: GO:0098948
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic specialization membrane (obsolete GO:0098948)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane","type":"narrow"}],"termid":"GO:0098948"}


id: PBO:0076497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonyl-tRNA synthetase 3","termid":"PBO:0076497"}


id: MONDO:0017849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Siegler-Brewer-Carey syndrome is characterized by cataracts, otitis media, intestinal malabsorption, chronic respiratory infection, and failure to thrive. It has been recently described in two sibs born to consanguineous parents. The patients also developed recurrent pneumonia and progressive azotemia leading to end-stage renal disease. Both children died of overwhelming infection (sepsis, meningitis). An autosomal recessive mode of inheritance was proposed.","definition_xrefs":["Orphanet:3167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siegler-Brewer-Carey syndrome","secondary_identifiers":["MEDGEN:419088","GARD:4867","UMLS:C2931473","MESH:C537335","SCTID:721076000"],"synonyms":[{"name":"Siegler Brewer Carey syndrome","type":"related"},{"name":"fatal multisystem syndrome involving the eyes, ears, lungs, intestines, and kidneys","type":"related"}],"termid":"MONDO:0017849","xrefs":{"Monarch":{"xref_id":"0017849"}}}


id: PBO:0052918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-1","termid":"PBO:0052918"}


id: GO:0071282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(II) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron(II) ion","termid":"GO:0010040"},{"relation_name":"is_a","term_name":"cellular response to iron ion","termid":"GO:0071281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to iron(II) ion","synonyms":[{"name":"cellular response to iron(II)","type":"exact"}],"termid":"GO:0071282"}


id: PR:Q9UT66
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4F11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.05","synonyms":[{"name":"Spom972h-SPCC4F11.05","type":"exact"}],"termid":"PR:Q9UT66"}


id: PBO:0062964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 7","termid":"PBO:0062964"}


id: PBO:0067867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 169","termid":"PBO:0067867"}


id: PBO:0043907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRK like proto-oncogene, adaptor protein","termid":"PBO:0043907"}


id: PBO:0067870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 172","termid":"PBO:0067870"}


id: GO:0106071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an adenylate cyclase-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:hjd","PMID:19246489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0106070"},{"relation_name":"positively_regulates","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","synonyms":[{"name":"positive regulation of adenylate cyclase-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0106071"}


id: PBO:0083487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VPS64/YDR200C; computationally predicted to have thiol-disulfide oxidoreductase activity","termid":"PBO:0083487"}


id: PBO:0031409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell","termid":"PBO:0031409"}


id: MONDO:0010811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-cancerous nodular enlargement of the prostate gland. It is characterized by the presence of epithelial cell nodules, and stromal nodules containing fibrous and smooth muscle elements. It is the most common urologic disorder in men, causing blockage of urine flow.","definition_xrefs":["NCIT:C2897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostatic hyperplasia","secondary_identifiers":["HP:0008711","MEDGEN:312369","SCTID:266569009","UMLS:C1704272","ICD10CM:N40","DOID:11132","EFO:0000284","ICD9:600.0","ICD9:600.20","OMIM:600082","ICD9:600","MESH:D011470"],"synonyms":[{"name":"BPH","type":"related"},{"name":"benign hyperplasia of prostate","type":"exact"},{"name":"benign hyperplasia of the prostate","type":"exact"},{"name":"benign prostate hyperplasia","type":"exact"},{"name":"benign prostatic Hypertrophy","type":"exact"},{"name":"benign prostatic hyperplasia","type":"exact"},{"name":"benign prostatic hyperplasia (disease)","type":"exact"},{"name":"benign prostatic hyperplasia - BPH","type":"exact"},{"name":"benign prostatic hypertrophy","type":"exact"},{"name":"prostate hypertrophy","type":"broad"},{"name":"prostatic hyperplasia, benign","type":"related"},{"name":"prostatic hypertrophy","type":"broad"}],"termid":"MONDO:0010811","xrefs":{"Monarch":{"xref_id":"0010811"}}}


id: PBO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase (predicted)","termid":"PBO:0000308"}


id: GO:0098516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which high humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of high humidity","termid":"GO:0098516"}


id: MONDO:0010426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked endothelial corneal dystrophy (XECD) is a rare subtype of posterior corneal dystrophy characterized by congenital ground glass corneal clouding or a diffuse corneal haze, and blurred vision in male patients.","definition_xrefs":["Orphanet:293621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal endothelial dystrophy","termid":"MONDO:0000766"},{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked endothelial corneal dystrophy","secondary_identifiers":["MESH:C567587","DOID:0060446","MEDGEN:413518","SCTID:718579008","GARD:17339","icd11.foundation:1842066261","OMIM:300779","UMLS:C2749049"],"synonyms":[{"name":"XECD","type":"exact"},{"name":"corneal dystrophy, endothelial, X-linked","type":"related"},{"name":"corneal dystrophy, endothelial, X-linked, X-linked dominant","type":"exact"},{"name":"endothelial corneal dystrophy, X-linked","type":"related"}],"termid":"MONDO:0010426","xrefs":{"Monarch":{"xref_id":"0010426"}}}


id: MONDO:0004003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic solid pseudopapillary carcinoma (obsolete MONDO:0004003)","termid":"MONDO:0004003","xrefs":{"Monarch":{"xref_id":"0004003"}}}


id: GO:0042025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleus","secondary_identifiers":["GO:0033649"],"termid":"GO:0042025"}


id: MONDO:0006054
data:
  {"annotated_genes":["SJAG_04884","SJAG_04287","SJAG_01419","SJAG_01156","SJAG_04394","SJAG_03131","SJAG_00997","SJAG_04885","SJAG_02748","SJAG_02426","SJAG_04206","SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[89031,86763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[88889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[88240,88239,88241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008170"},{"annotations":[88378,88376,88377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700275"},{"annotations":[89082,89083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm affecting the male and female reproductive system.","definition_xrefs":["NCIT:C3674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01156":null,"SJAG_01419":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03131":null,"SJAG_03429":null,"SJAG_04206":null,"SJAG_04287":null,"SJAG_04394":null,"SJAG_04884":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"reproductive system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0178830","EFO:1000051","MEDGEN:64246"],"synonyms":[{"name":"neoplasm of reproductive system","type":"exact"},{"name":"neoplasm of the reproductive system","type":"exact"},{"name":"reproductive neoplasm","type":"exact"},{"name":"reproductive system neoplasm","type":"exact"},{"name":"reproductive system neoplasm (disease)","type":"exact"},{"name":"reproductive system tumor","type":"exact"},{"name":"reproductive system tumour","type":"exact"},{"name":"reproductive tumor","type":"exact"},{"name":"reproductive tumour","type":"exact"},{"name":"tumor of reproductive system","type":"exact"},{"name":"tumor of the reproductive system","type":"exact"},{"name":"tumour of reproductive system","type":"exact"},{"name":"tumour of the reproductive system","type":"exact"}],"termid":"MONDO:0006054","terms_by_termid":{"MONDO:0008170":null,"MONDO:0009050":null,"MONDO:0011962":null,"MONDO:0013872":null,"MONDO:0032747":null,"MONDO:0700275":null},"xrefs":{"Monarch":{"xref_id":"0006054"}}}


id: PR:O60141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 94 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein saf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.10c","secondary_identifiers":["UniProtKB:O60141"],"synonyms":[{"name":"Spom972h-CCDC94","type":"exact"}],"termid":"PR:O60141"}


id: PATO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's exhibiting transverse stripes of one hue or degree of saturation crossing another.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"banded","synonyms":[{"name":"striped","type":"exact"}],"termid":"PATO:0001946"}


id: PBO:0044949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 5","termid":"PBO:0044949"}


id: SO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyluridine","secondary_identifiers":["RNAMOD:072"],"synonyms":[{"name":"5-methylaminomethyluridine","type":"exact"},{"name":"five methylaminomethyluridine","type":"exact"},{"name":"mnm5U","type":"exact"}],"termid":"SO:0001364"}


id: PBO:0068886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 127, pseudogene","termid":"PBO:0068886"}


id: FYPO:0007578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton","termid":"FYPO:0007577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to actin cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal protein localisation to actin cytoskeleton during vegetative growth","type":"exact"},{"name":"abnormal protein localization to actin cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007578"}


id: GO:1902131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-lariciresinol.","definition_xrefs":["PMID:8910615","GOC:TermGenie","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(+)-lariciresinol metabolic process","termid":"GO:1902130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-lariciresinol catabolic process","synonyms":[{"name":"(+)-lariciresinol breakdown","type":"exact"},{"name":"(+)-lariciresinol catabolism","type":"exact"},{"name":"(+)-lariciresinol degradation","type":"exact"}],"termid":"GO:1902131"}


id: PBO:0041905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene","termid":"PBO:0041905"}


id: PBO:0065425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 10","termid":"PBO:0065425"}


id: PBO:0085395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane P2-type H+-ATPase; pumps protons out of cell; major regulator of cytoplasmic pH and plasma membrane potential; long-lived hexameric protein asymmetrically distributed at plasma membrane between mother cells and buds; accumulates at high levels in mother cells during aging, buds emerge with very low levels of Pma1p, newborn cells have low levels of Pma1p; Hsp30p plays a role in Pma1p regulation; interactions with Std1p appear to propagate [GAR+]","termid":"PBO:0085395"}


id: PBO:0083264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 5% of ORF overlaps the verified gene IMP1","termid":"PBO:0083264"}


id: GO:0036189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-diene + NADPH + H+ + O2 = abieta-7,13-dien-18-ol + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"abieta-7,13-diene hydroxylase activity","secondary_identifiers":["RHEA:26217","MetaCyc:RXN-8507","KEGG_REACTION:R06351"],"synonyms":[{"name":"abietadiene hydroxylase","type":"broad"}],"termid":"GO:0036189"}


id: PR:O14040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DIS3-like exonuclease 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3-like exonuclease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.07c","secondary_identifiers":["UniProtKB:O14040"],"synonyms":[{"name":"Spom972h-DIS3L2","type":"exact"}],"termid":"PR:O14040"}


id: PBO:0080209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestigial like family member 3","termid":"PBO:0080209"}


id: MONDO:0020602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Simpson-Golabi-Behmel syndrome in which the cause of the disease is a mutation in the GPC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Simpson-Golabi-Behmel syndrome","termid":"MONDO:0010731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Simpson-Golabi-Behmel syndrome type 1","secondary_identifiers":["DOID:0060248","MEDGEN:162917","OMIM:312870","UMLS:C0796154"],"synonyms":[{"name":"DGSX Golabi-Rosen syndrome","type":"exact"},{"name":"GPC3 Simpson-Golabi-Behmel syndrome","type":"exact"},{"name":"Golabi-Rosen syndrome","type":"related"},{"name":"SGBS1","type":"exact"},{"name":"Sgbs","type":"related"},{"name":"Simpson dysmorphia syndrome","type":"exact"},{"name":"Simpson-Golabi-Behmel syndrome caused by mutation in GPC3","type":"exact"},{"name":"Simpson-Golabi-Behmel syndrome type 1","type":"exact"},{"name":"Simpson-Golabi-Behmel syndrome, type 1","type":"related"},{"name":"Simpson-Golabi-Behmel syndrome, type 1, X-linked recessive","type":"exact"},{"name":"bulldog syndrome","type":"exact"},{"name":"dysplasia gigantism syndrome, X-linked","type":"related"}],"termid":"MONDO:0020602","xrefs":{"Monarch":{"xref_id":"0020602"}}}


id: PBO:0090741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX importer","termid":"PBO:0090741"}


id: GO:0051261
data:
  {"annotated_genes":["SJAG_01224","SJAG_01993","SJAG_03380","SJAG_01297","SJAG_04312","SJAG_04841","SJAG_00279","SJAG_00723","SJAG_01894","SJAG_03025","SJAG_02700","SJAG_05296","SJAG_02336","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71787,75055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[77940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[94097,77228,81888,80835],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[81429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[120005,100403,91394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[69321,63008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[103646],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"The process in which protein polymers, compounds composed of a large number of component monomers, are broken down. Depolymerization occurs by the successive removal of monomers from an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00723":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03380":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"protein polymer breakdown","type":"exact"},{"name":"protein polymer catabolic process","type":"exact"},{"name":"protein polymer catabolism","type":"exact"},{"name":"protein polymer degradation","type":"exact"}],"termid":"GO:0051261","terms_by_termid":{"GO:0007019":null,"GO:0030042":null,"GO:0031117":null,"GO:0051016":null,"GO:0060172":null,"GO:0070462":null,"GO:0072318":null}}


id: PBO:0060842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament light pseudogene 1","termid":"PBO:0060842"}


id: GO:0120182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disaggregation of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of focal adhesion disassembly","termid":"GO:0120182"}


id: MONDO:0030837
data:
  {"annotated_genes":["SJAG_02517"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87517],"is_not":false,"summary":null,"term":"MONDO:0030837"}]},"cv_name":"mondo","definition":"An autosomal dominant neurodevelopmental disorder characterized by global developmental delay apparent in infancy. Affected individuals have delayed walking with variable gait abnormalities, including ataxia and spasticity, impaired intellectual development with poor or absent speech and language, and progressive microcephaly. Dysmorphic facial features may also be observed. Most patients have early-onset seizures; some may develop a demyelinating peripheral neuropathy. The clinical features suggest involvement of both the central and peripheral nervous systems.","definition_xrefs":["OMIM:619092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02517":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, impaired language, epilepsy, and gait abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18535","MEDGEN:1764121","UMLS:C5436788"],"synonyms":[{"name":"NEDMILEG","type":"broad"},{"name":"NEDMILEG, AD","type":"exact"},{"name":"neurodevelopmental disorder with microcephaly, impaired language, epilepsy, and gait abnormalities, autosomal dominant","type":"exact"}],"termid":"MONDO:0030837","terms_by_termid":{"MONDO:0030837":null},"xrefs":{"Monarch":{"xref_id":"0030837"}}}


id: PBO:0077906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosylprotein sulfotransferase 2","termid":"PBO:0077906"}


id: FYPO:0006154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pheromone response mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PMID:22900017","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pheromone response gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pheromone response gene transcripts during vegetative growth","type":"exact"},{"name":"increased pheromone response gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006154"}


id: FYPO:0001401
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[121067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[121089,121090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[121060,121072,121061,121068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_03596","SJAG_01143"],"name":"abnormal protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to cell division site","type":"exact"},{"name":"abnormal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0001401","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0003946":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: PBO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo84 (predicted)","termid":"PBO:0000907"}


id: PBO:0080704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 7B","termid":"PBO:0080704"}


id: PBO:0090376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 2 Tsr402","termid":"PBO:0090376"}


id: PBO:0039093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook containing transcription factor 1 pseudogene 1","termid":"PBO:0039093"}


id: GO:0021568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 development","termid":"GO:0021568"}


id: PBO:0056282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase beta","termid":"PBO:0056282"}


id: MONDO:0012899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"androgenetic alopecia","termid":"MONDO:0005339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia, androgenetic, 3","secondary_identifiers":["MEDGEN:382808","OMIM:612421","UMLS:C2676272","MESH:C567317"],"synonyms":[{"name":"AGA3","type":"exact"},{"name":"alopecia, androgenetic, 3","type":"exact"}],"termid":"MONDO:0012899","xrefs":{"Monarch":{"xref_id":"0012899"}}}


id: GO:0086023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals beginning with a G protein-coupled adrenergic cell surface receptor combining with epinephrine or norepinephrine, to activate adenylate cyclase, which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway","termid":"GO:0071880"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","synonyms":[{"name":"adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:0086023"}


id: GO:0039521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of autophagy in the host.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host autophagy (obsolete GO:0039521)","synonyms":[{"name":"inhibition by virus of host autophagy","type":"exact"},{"name":"negative regulation by virus of host autophagy","type":"broad"}],"termid":"GO:0039521"}


id: MONDO:0010703
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88796],"is_not":false,"summary":null,"term":"MONDO:0010703"}]},"cv_name":"mondo","definition":"Ornithine transcarbamylase deficiency (OTCD) is a disorder of urea cycle metabolism and ammonia detoxification characterized by either a severe, neonatal-onset disease found almost exclusively in males, or later-onset (partial) forms of the disease. Both present with episodes of hyperammonemia that can be fatal and which can lead to neurological complications.","definition_xrefs":["Orphanet:664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"ornithine carbamoyltransferase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10052450","MESH:D020163","NANDO:1200804","SCTID:80908008","MEDGEN:75692","NANDO:2200479","GARD:8391","NCIT:C84957","OMIM:311250","EFO:0007409","DOID:9271","icd11.foundation:1822444026","UMLS:C0268542"],"synonyms":[{"name":"OCT deficiency","type":"exact"},{"name":"OTC deficiency","type":"exact"},{"name":"OTCD","type":"exact"},{"name":"deficiency of citrulline phosphorylase","type":"exact"},{"name":"ornithine carbamoyltransferase deficiency","type":"exact"},{"name":"ornithine carbamoyltransferase deficiency disease","type":"exact"},{"name":"ornithine transcarbamylase deficiency","type":"exact"},{"name":"ornithine transcarbamylase deficiency, hyperammonemia due to","type":"related"},{"name":"valproate sensitivity","type":"related"}],"termid":"MONDO:0010703","terms_by_termid":{"MONDO:0010703":null},"xrefs":{"Monarch":{"xref_id":"0010703"}}}


id: PBO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX11 pseudogene 1","termid":"PBO:0043763"}


id: MONDO:1012695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in cattle due to a mutation in the PRKG2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, PRKG2-related, cattle","secondary_identifiers":["OMIA:001485-9913"],"termid":"MONDO:1012695","xrefs":{"Monarch":{"xref_id":"1012695"}}}


id: MONDO:0006587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nodular nonsuppurative panniculitis (obsolete MONDO:0006587)","termid":"MONDO:0006587","xrefs":{"Monarch":{"xref_id":"0006587"}}}


id: MONDO:0006229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the stomach. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"gastric neuroendocrine neoplasm","termid":"MONDO:0003111"},{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric small cell neuroendocrine carcinoma","secondary_identifiers":["UMLS:C1333788","DOID:6552","EFO:1000277","MEDGEN:272664","ONCOTREE:STSC"],"synonyms":[{"name":"Oat cell carcinoma of stomach","type":"exact"},{"name":"Oat cell carcinoma of the stomach","type":"exact"},{"name":"STSC","type":"related"},{"name":"gastric Oat cell carcinoma","type":"exact"},{"name":"gastric small cell carcinoma","type":"exact"},{"name":"gastric small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of stomach","type":"exact"},{"name":"small cell carcinoma of the stomach","type":"exact"},{"name":"stomach small cell carcinoma","type":"exact"}],"termid":"MONDO:0006229","xrefs":{"Monarch":{"xref_id":"0006229"}}}


id: PBO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicalin","termid":"PBO:0060633"}


id: PBO:0077807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 4 pseudogene 1","termid":"PBO:0077807"}


id: PBO:0039348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1-microglobulin/bikunin precursor","termid":"PBO:0039348"}


id: FYPO:0007813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing stavudine.","definition_xrefs":["PMID:34108240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on stavudine","synonyms":[{"name":"normal cell population growth in presence of stavudine","type":"exact"},{"name":"normal cell population growth on stavudine","type":"exact"},{"name":"normal vegetative cell population growth on stavudine","type":"exact"}],"termid":"FYPO:0007813"}


id: PBO:0048514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 2 pseudogene 1","termid":"PBO:0048514"}


id: PBO:0005890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine, mitochondrial","termid":"PBO:0005890"}


id: GO:0070803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of metula development","termid":"GO:0070802"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metula development","termid":"GO:0070803"}


id: PBO:0074389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth muscle induced lncRNA, enhancer of proliferation","termid":"PBO:0074389"}


id: PBO:0089762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6- mannanase","termid":"PBO:0089762"}


id: PBO:0088369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase","termid":"PBO:0088369"}


id: GO:0048353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Nucleus resulting from the fusion of the male gamete and two polar nuclei in the central cell of the embryo sac.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"primary endosperm nucleus","termid":"GO:0048353"}


id: PBO:0027992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027992"}


id: PBO:0086672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology comparisons and RT-PCR; partially overlaps RND5-3; YLR156C-A has a paralog, YLR159C-A, that arose from a segmental duplication","termid":"PBO:0086672"}


id: GO:0052710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","termid":"GO:0052708"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolic process","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine breakdown","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolism","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine degradation","type":"exact"},{"name":"hercynine breakdown","type":"exact"},{"name":"hercynine catabolic process","type":"exact"},{"name":"hercynine catabolism","type":"exact"},{"name":"hercynine degradation","type":"exact"},{"name":"histidine betaine breakdown","type":"exact"},{"name":"histidine betaine catabolic process","type":"exact"},{"name":"histidine betaine catabolism","type":"exact"},{"name":"histidine betaine degradation","type":"exact"}],"termid":"GO:0052710"}


id: GO:0102372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-amyrin + NADPH(4-) + O2 + H+ = uvaol + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-amyrin 28-monooxygenase activity (obsolete GO:0102372)","termid":"GO:0102372"}


id: MONDO:0060759
data:
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id: PBO:0083081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Divalent metal ion transporter; broad specificity for di-valent and tri-valent metals; post-translationally regulated by levels of metal ions; member of the Nramp family of metal transport proteins","termid":"PBO:0083081"}


id: MONDO:0009026
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86923],"is_not":false,"summary":null,"term":"MONDO:0009026"}]},"cv_name":"mondo","definition":"Costello syndrome (CS) is a rare multisystemic disorder characterized by failure to thrive, short stature, developmental delay or intellectual disability, joint laxity, soft skin, and distinctive facial features. Cardiac and neurological involvement is common and there is an increased lifetime risk of certain tumors.","definition_xrefs":["Orphanet:3071"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dermis elastic tissue disorder (obsolete MONDO:0019292)","termid":"MONDO:0019292"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"Costello syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:799.89","MedDRA:10067380","GARD:1550","MESH:D056685","NANDO:1200463","NCIT:C84652","icd11.foundation:1946512039","MEDGEN:108454","NORD:1011","NANDO:2200971","DOID:0050469","OMIM:218040","SCTID:309776008","UMLS:C0587248"],"synonyms":[{"name":"CSTLO","type":"related"},{"name":"Costello syndrome","type":"exact"},{"name":"FCS syndrome","type":"exact"},{"name":"congenital myopathy with excess of muscle spindles","type":"exact"},{"name":"faciocutaneoskeletal syndrome","type":"exact"},{"name":"myopathy, congenital, with excess of muscle spindles","type":"related"}],"termid":"MONDO:0009026","terms_by_termid":{"MONDO:0009026":null},"xrefs":{"Monarch":{"xref_id":"0009026"}}}


id: MONDO:0100532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharospasm, benign essential, susceptibility to","secondary_identifiers":["MEDGEN:1640286","UMLS:C4692845","OMIM:606798"],"termid":"MONDO:0100532","xrefs":{"Monarch":{"xref_id":"0100532"}}}


id: MONDO:1010825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndactyly, non-human animal","termid":"MONDO:1010160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly, dog","secondary_identifiers":["OMIA:000963-9615"],"termid":"MONDO:1010825","xrefs":{"Monarch":{"xref_id":"1010825"}}}


id: MONDO:0007462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple sclerosis, susceptibility to","secondary_identifiers":["OMIMPS:126200","UMLS:C1868685","MEDGEN:358269"],"synonyms":[{"name":"MS","type":"related"},{"name":"disseminated sclerosis","type":"related"}],"termid":"MONDO:0007462","xrefs":{"Monarch":{"xref_id":"0007462"}}}


id: PBO:0064943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protease associated domain containing 1 pseudogene 1","termid":"PBO:0064943"}


id: PR:Q9USN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-25 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.04","secondary_identifiers":["UniProtKB:Q9USN1"],"synonyms":[{"name":"Spom972h-SNX25","type":"exact"}],"termid":"PR:Q9USN1"}


id: PBO:0091070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp49","termid":"PBO:0091070"}


id: PR:Q9USY3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MAK10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21373:SF0","OMA:SCHPO04003","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase, 35 NatC auxiliary subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.03","secondary_identifiers":["UniProtKB:Q9USY3"],"synonyms":[{"name":"N-terminal acetyltransferase C complex subunit mak10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatC complex subunit mak10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA35","type":"exact"}],"termid":"PR:Q9USY3"}


id: GO:0031614
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits that form the peripheral lid of the regulatory particle of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle, lid subcomplex (obsolete GO:0031614)","termid":"GO:0031614"}


id: GO:0140969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the lungs with respect to the left and right halves of the organism.","definition_xrefs":["PMID:21131974","PMID:20007846","GOC:BHFL","GOC:rl","PMID:19944405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of lung left/right asymmetry","termid":"GO:0140969"}


id: PBO:0074599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10B","termid":"PBO:0074599"}


id: GO:0051031
data:
  {"annotated_genes":["SJAG_03358","SJAG_02661","SJAG_04622","SJAG_03156","SJAG_04083","SJAG_00178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80260,107081,73837,107554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[80845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[81242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of tRNA, transfer ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_02661":null,"SJAG_03156":null,"SJAG_03358":null,"SJAG_04083":null,"SJAG_04622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tRNA transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0051031","terms_by_termid":{"GO:0006409":null,"GO:0016031":null,"GO:0071528":null}}


id: GO:0010882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction by changing the calcium ion signals that trigger contraction.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction by calcium ion signaling","synonyms":[{"name":"regulation of cardiac muscle contraction by calcium ion signalling","type":"exact"}],"termid":"GO:0010882"}


id: PBO:0047033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member A","termid":"PBO:0047033"}


id: PBO:0040557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1","termid":"PBO:0040557"}


id: PBO:0057987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3913-1","termid":"PBO:0057987"}


id: GO:1903188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19467235","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vitellogenesis","termid":"GO:1903186"},{"relation_name":"positively_regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vitellogenesis","synonyms":[{"name":"activation of vitellogenesis","type":"narrow"},{"name":"activation of yolk production","type":"narrow"},{"name":"positive regulation of yolk production","type":"exact"},{"name":"up regulation of vitellogenesis","type":"exact"},{"name":"up regulation of yolk production","type":"exact"},{"name":"up-regulation of vitellogenesis","type":"exact"},{"name":"up-regulation of yolk production","type":"exact"},{"name":"upregulation of vitellogenesis","type":"exact"},{"name":"upregulation of yolk production","type":"exact"}],"termid":"GO:1903188"}


id: GO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell proliferation","termid":"GO:0060043"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell proliferation","termid":"GO:0060038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell proliferation","synonyms":[{"name":"positive regulation of heart muscle cell proliferation","type":"related"}],"termid":"GO:0060045"}


id: MONDO:0012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hunter-Macdonald syndrome","secondary_identifiers":["MEDGEN:383181","OMIM:611962","MESH:C567445","UMLS:C2677745"],"synonyms":[{"name":"Hunter-Macdonald syndrome","type":"exact"}],"termid":"MONDO:0012773","xrefs":{"Monarch":{"xref_id":"0012773"}}}


id: PBO:0076894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 48","termid":"PBO:0076894"}


id: PBO:0110035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH1 pseudogene 1","termid":"PBO:0110035"}


id: MONDO:0037742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of mesenchymal gynecologic neoplasms. It includes endometrial stromal nodule, endometrioid stromal sarcoma, and undifferentiated sarcoma. Endometrial stromal nodule has been described in the uterine corpus only. Histologically, it is characterized by the lack of infiltration of the surrounding tissues. Endometrioid stromal sarcoma affects the uterine corpus, and rarely, the ovaries, cervix, and vagina. In the uterine corpus it is classified as low grade or high grade endometrial stromal sarcoma. In the remainder of the anatomic sites it is classified as low grade endometrioid stromal sarcoma. Undifferentiated sarcoma was previously also known as high grade endometrial stromal sarcoma. In 2014, high grade endometrial stromal sarcoma was reclassified and is currently considered a distinct and rare neoplasm that affects the uterine corpus only. It appears to have a prognosis that falls between low grade endometrial stromal sarcoma and undifferentiated sarcoma. The latter affects the uterine corpus and rarely the remainder of the anatomic sites.","definition_xrefs":["NCIT:C8384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid stromal and related neoplasms","secondary_identifiers":["UMLS:C4287868","MEDGEN:925400"],"synonyms":[{"name":"endometrioid stromal and related neoplasms","type":"exact"},{"name":"endometrioid stromal and related tumors","type":"exact"},{"name":"endometrioid stromal and related tumours","type":"exact"}],"termid":"MONDO:0037742","xrefs":{"Monarch":{"xref_id":"0037742"}}}


id: MONDO:0018910
data:
  {"annotated_genes":["SJAG_00115","SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011683"},{"annotations":[86878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014070"}]},"cv_name":"mondo","definition":"Oculocutaneous albinism (OCA) describes a group of inherited disorders of melanin biosynthesis characterized by a generalized reduction in pigmentation of hair, skin and eyes and variable ocular findings including nystagmus, reduced visual acuity and photophobia. Variants include OCA1A (the most severe form), OCA1B, OCA1-minimal pigment (OCA1-MP), OCA1-temperature sensitive (OCA1-TS), OCA2, OCA3, OCA4, OCA5, OCA6 and OCA7.","definition_xrefs":["Orphanet:55"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of melanin metabolism","termid":"MONDO:0018134"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"oculocutaneous albinism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1522","GARD:10958","ICD9:270.2","MEDGEN:36250","ICD10CM:E70.32","NANDO:2200986","MESH:D016115","OMIMPS:203100","SCTID:63844009","NANDO:1200637","NCIT:C84941","NANDO:1200641","DOID:0050632","icd11.foundation:1189424097","UMLS:C0078918"],"synonyms":[{"name":"OCA","type":"exact"},{"name":"albinism, oculocutaneous","type":"related"},{"name":"non-syndromic oculocutaneous albinism","type":"exact"},{"name":"nonsyndromic oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0018910","terms_by_termid":{"MONDO:0011683":null,"MONDO:0014070":null},"xrefs":{"Monarch":{"xref_id":"0018910"}}}


id: GO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A factor is necessary for cleavage but not for poly(A) addition in mRNA 3' end processing; can stimulate poly(A) addition on substrates with a CstF binding site upstream of the AAUAAA hexanucleotide.","definition_xrefs":["PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage stimulation factor activity (obsolete GO:0030365)","synonyms":[{"name":"CstF","type":"exact"},{"name":"cleavage stimulation factor activity","type":"exact"}],"termid":"GO:0030365"}


id: PBO:0000043
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homology_type","termid":"PBO:0000043"}


id: PBO:0060967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor, X-box binding like 1","termid":"PBO:0060967"}


id: FYPO:0004933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which prospore membrane formation is increased.","definition_xrefs":["PomBase:mah","PMID:20410137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000121","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased prospore membrane formation","synonyms":[{"name":"increased ascospore-type prospore membrane assembly","type":"exact"},{"name":"increased forespore membrane formation","type":"exact"}],"termid":"FYPO:0004933"}


id: PR:Q10447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea5 gene.","definition_xrefs":["UniProtKB:Q10447","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.14c","synonyms":[{"name":"Spom972h-tea5","type":"exact"}],"termid":"PR:Q10447"}


id: PBO:0069167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 419, pseudogene","termid":"PBO:0069167"}


id: PBO:0053661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 838","termid":"PBO:0053661"}


id: PBO:0059682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 48","termid":"PBO:0059682"}


id: MOD:00294
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-histidine residues, an L-serine residue and a four-iron four-sulfur cluster to bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"bis-L-cysteinyl L-N3'-histidino L-serinyl tetrairon tetrasulfide","type":"exact"},{"name":"tetra-mu3-sulfidobis(S-cysteinyliron)(N3'-histidinoiron)(O3-serinyliron)","type":"exact"}],"termid":"MOD:00294"}


id: GO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of floral organ abscission","termid":"GO:0060860"}


id: GO:0048536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen development","termid":"GO:0048536"}


id: MONDO:0957264
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88304],"is_not":false,"summary":null,"term":"MONDO:0957264"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Coats plus syndrome","termid":"MONDO:0012815"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"cerebroretinal microangiopathy with calcifications and cysts 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830497","OMIM:620368","MEDGEN:1841133"],"termid":"MONDO:0957264","terms_by_termid":{"MONDO:0957264":null},"xrefs":{"Monarch":{"xref_id":"0957264"}}}


id: PR:O74417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC14G10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14G10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.04","synonyms":[{"name":"Spom972h-SPCC14G10.04","type":"exact"}],"termid":"PR:O74417"}


id: PBO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD59 molecule (CD59 blood group)","termid":"PBO:0042333"}


id: PBO:0073865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 1","termid":"PBO:0073865"}


id: PBO:0089718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex PHD finger subunit Nto1","termid":"PBO:0089718"}


id: MONDO:0600023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic form of inflammatory myopathy.","definition_xrefs":["MONDO:patterns/idiopathic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"idiopathic inflammatory myopathy","secondary_identifiers":["MEDGEN:148290","NCIT:C116796","UMLS:C0751356","SCTID:702380008"],"synonyms":[{"name":"idiopathic myositis","type":"exact"}],"termid":"MONDO:0600023","xrefs":{"Monarch":{"xref_id":"0600023"}}}


id: PBO:0050800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 7 pseudogene 1","termid":"PBO:0050800"}


id: MOD:00180
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171","Unimod:40#C","PubMed:12876326","PubMed:14752058","PubMed:643076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 182.96-182.98 Da","termid":"MOD:00777"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-sulfo-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(sulfosulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(sulfothio)propanoic acid","type":"exact"},{"name":"3-(sulfosulfanyl)-L-alanine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"S-sulfo-L-cysteine","type":"exact"},{"name":"S-sulfocysteine","type":"exact"},{"name":"SSulfCys","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"cysteine sulfate thioester","type":"exact"},{"name":"cysteine-S-sulfonic acid","type":"exact"}],"termid":"MOD:00180"}


id: PBO:0068498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 83, pseudogene","termid":"PBO:0068498"}


id: PBO:0074642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 35","termid":"PBO:0074642"}


id: MOD:01478
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into an 4'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-fluoro-L-phenylalanine","synonyms":[{"name":"4-fluorophenylalanine","type":"exact"},{"name":"p-fluorophenylalanine","type":"exact"},{"name":"para-fluorophenylalanine","type":"exact"},{"name":"rho-fluorophenylalanine","type":"exact"}],"termid":"MOD:01478"}


id: GO:0017169
data:
  {"annotated_genes":["SJAG_00168","SJAG_00999","SJAG_01233","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008444"},{"annotations":[78358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003881"},{"annotations":[68681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003882"},{"annotations":[94833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004142"},{"annotations":[94834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004307"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP + alcohol = CMP + phosphatidyl alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00999":null,"SJAG_01233":null,"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016780"],"is_obsolete":false,"name":"CDP-alcohol phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017169","terms_by_termid":{"GO:0003881":null,"GO:0003882":null,"GO:0004142":null,"GO:0004307":null,"GO:0008444":null}}


id: PBO:0055011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2426","termid":"PBO:0055011"}


id: PBO:0047791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box E3","termid":"PBO:0047791"}


id: FYPO:0005265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of lead ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to lead","synonyms":[{"name":"resistance to lead during mitotic cell cycle","type":"related"},{"name":"resistance to lead during vegetative growth","type":"exact"},{"name":"resistance to lead ions","type":"exact"},{"name":"resistant to lead","type":"exact"}],"termid":"FYPO:0005265"}


id: PBO:0070204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 129 pseudogene","termid":"PBO:0070204"}


id: GO:0045998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid biosynthetic process","termid":"GO:0007554"},{"relation_name":"is_a","term_name":"positive regulation of ecdysteroid metabolic process","termid":"GO:0045966"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of steroid hormone biosynthetic process","termid":"GO:0090031"},{"relation_name":"positively_regulates","term_name":"ecdysteroid biosynthetic process","termid":"GO:0045456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ecdysteroid biosynthetic process","synonyms":[{"name":"activation of ecdysteroid biosynthetic process","type":"narrow"},{"name":"positive regulation of ecdysteroid anabolism","type":"exact"},{"name":"positive regulation of ecdysteroid biosynthesis","type":"exact"},{"name":"positive regulation of ecdysteroid formation","type":"exact"},{"name":"positive regulation of ecdysteroid synthesis","type":"exact"},{"name":"stimulation of ecdysteroid biosynthetic process","type":"narrow"},{"name":"up regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"up-regulation of ecdysteroid biosynthetic process","type":"exact"},{"name":"upregulation of ecdysteroid biosynthetic process","type":"exact"}],"termid":"GO:0045998"}


id: FYPO:0001941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cerulenin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cerulenin","synonyms":[{"name":"resistance to cerulenin during mitotic cell cycle","type":"related"},{"name":"resistance to cerulenin during vegetative growth","type":"exact"},{"name":"resistant to cerulenin","type":"exact"}],"termid":"FYPO:0001941"}


id: PBO:0078078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat and ankyrin repeat containing 1","termid":"PBO:0078078"}


id: MONDO:0800339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngospasm, severe neonatal episodic","secondary_identifiers":["MEDGEN:460867","UMLS:C3149517"],"synonyms":[{"name":"SNEL","type":"exact"}],"termid":"MONDO:0800339","xrefs":{"Monarch":{"xref_id":"0800339"}}}


id: PBO:0075096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 145","termid":"PBO:0075096"}


id: PBO:0064598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 1","termid":"PBO:0064598"}


id: PBO:0057222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378j","termid":"PBO:0057222"}


id: MONDO:0010688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by X-linked inheritance of slowly progressing neuropathy with onset in the first or second decade of life.","definition_xrefs":["DOID:0070159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensory neuropathy X-linked","secondary_identifiers":["MESH:C564090","UMLS:C1839602","MEDGEN:333359","OMIM:310470"],"synonyms":[{"name":"neuropathy, hereditary sensory, X-linked","type":"related"}],"termid":"MONDO:0010688","xrefs":{"Monarch":{"xref_id":"0010688"}}}


id: GO:0030921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-(Z)-2,3-didehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["PMID:9631087","RESID:AA0183"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine dehydrogenation to form (Z)-2,3-didehydrotyrosine (obsolete GO:0030921)","termid":"GO:0030921"}


id: PBO:0084041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-glycan remodelase; conserved phosphoesterase domain-containing protein; acts together with Emp24p/Erv25p in cargo exit from the ER; functional ortholog of mammalian GPI-glycan remodelase PGAP5; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO)","termid":"PBO:0084041"}


id: GO:0005094
data:
  {"annotated_genes":["SJAG_03361","SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77004,112629],"is_not":false,"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-dissociation inhibitor activity","termid":"GO:0005092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02831":null,"SJAG_03361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"Rho GDP-dissociation inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005094","terms_by_termid":{"GO:0005094":null}}


id: PBO:0056747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit","termid":"PBO:0056747"}


id: PBO:0078759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 2","termid":"PBO:0078759"}


id: PBO:0087911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state","termid":"PBO:0087911"}


id: PBO:0074056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 35","termid":"PBO:0074056"}


id: PBO:0065886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB34, member RAS oncogene family","termid":"PBO:0065886"}


id: PBO:0052831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 224, pseudogene","termid":"PBO:0052831"}


id: MONDO:0011921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aural atresia, congenital","secondary_identifiers":["GARD:18275","MESH:C564321","OMIM:607842","UMLS:C1842937","MEDGEN:375051"],"synonyms":[{"name":"CAA","type":"related"},{"name":"aural atresia, congenital","type":"exact"},{"name":"aural atresia, congenital, with hyposmia","type":"related"}],"termid":"MONDO:0011921","xrefs":{"Monarch":{"xref_id":"0011921"}}}


id: PBO:0063142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 2","termid":"PBO:0063142"}


id: MONDO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a Indian prawn.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete Indian prawn allergy (obsolete MONDO:0000802)","secondary_identifiers":["DOID:0060527"],"synonyms":[{"name":"Fenneropenaeus indicus allergy","type":"exact"},{"name":"Indian prawn allergic disease","type":"exact"},{"name":"allergy of Indian prawn","type":"exact"}],"termid":"MONDO:0000802","xrefs":{"Monarch":{"xref_id":"0000802"}}}


id: PBO:0084760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial membrane transporter; mediates uptake of the essential cofactor thiamine pyrophosphate (ThPP) into mitochondria; expression appears to be regulated by carbon source; member of the mitochondrial carrier family","termid":"PBO:0084760"}


id: PBO:0044084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A3","termid":"PBO:0044084"}


id: PBO:0045636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 48 (pseudogene)","termid":"PBO:0045636"}


id: GO:0106003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in modulation of signaling and synaptic function in the brain, predominantly in the cerebral cortex and hippocampus. Forms dimers and multimers of amyloid beta peptide 40 and peptide 42 (proteolytic cleavage products of amyloid beta A4 protein, also known as amyloid beta precursor protein). Mostly found in the extracellular space with a proportion occurring as membrane-bound species. Influences synaptic plasticity through various receptors, mediates dendritic spine loss leading to decreased synapse density, inhibits long-term potentiation (LTP) and enhances long-term depression (LTD). Soluble multimeric form is the main pathogenic species linked to Alzheimer's disease.","definition_xrefs":["GOC:bhm","PMID:18568035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"amyloid-beta complex","synonyms":[{"name":"ADDL complex","type":"narrow"},{"name":"Abeta complex","type":"exact"},{"name":"Abeta-derived diffusible ligand complex","type":"narrow"},{"name":"amyloid beta complex","type":"exact"},{"name":"amyloid beta dimer","type":"narrow"},{"name":"amyloid beta heterodimer","type":"narrow"},{"name":"amyloid beta heterooligomer","type":"narrow"},{"name":"amyloid beta heterotrimer","type":"narrow"},{"name":"amyloid beta homodimer","type":"narrow"},{"name":"amyloid beta homooligomer","type":"narrow"},{"name":"amyloid beta homotrimer","type":"narrow"},{"name":"amyloid beta oligomer","type":"narrow"},{"name":"amyloid beta trimer","type":"narrow"},{"name":"amyloid-beta protein 40 complex","type":"narrow"},{"name":"amyloid-beta protein 40/42 complex","type":"narrow"},{"name":"amyloid-beta protein 42 complex","type":"narrow"},{"name":"beta amyloid complex","type":"exact"},{"name":"beta-amyloid complex","type":"exact"},{"name":"betaA complex","type":"exact"},{"name":"heterodimer of amyloid beta protein","type":"narrow"},{"name":"heterooligomer of amyloid beta protein","type":"narrow"},{"name":"heterotrimer of amyloid beta protein","type":"narrow"},{"name":"homodimer of amyloid beta protein","type":"narrow"},{"name":"homooligomer of amyloid beta protein","type":"narrow"},{"name":"homotrimer of amyloid beta protein","type":"narrow"}],"termid":"GO:0106003"}


id: PR:Q8TFG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear envelope pore membrane protein POM 121C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored protein PB15E9.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.01c","secondary_identifiers":["UniProtKB:Q8TFG9"],"synonyms":[{"name":"Spom972h-POM121C","type":"exact"}],"termid":"PR:Q8TFG9"}


id: SO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif that is active in the DNA form of the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_motif","termid":"SO:0000714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/DNA_motif"],"synonyms":[{"name":"DNA motif","type":"exact"}],"termid":"SO:0000713"}


id: FYPO:0005570
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[121090,121089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[121061,121060,121068,121072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell periphery during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005570","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: MONDO:0054740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any blepharo-cheilo-odontic syndrome in which the cause of the disease is a mutation in the CDH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blepharocheilodontic syndrome","termid":"MONDO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"blepharocheilodontic syndrome 1","secondary_identifiers":["UMLS:C4551988","OMIM:119580","MEDGEN:1632198","DOID:0080345"],"synonyms":[{"name":"BCD syndrome","type":"related"},{"name":"BCDS1","type":"related"},{"name":"CDH1 blepharo-cheilo-odontic syndrome","type":"exact"},{"name":"Lagophthalmia with bilateral cleft 51P and palate","type":"related"},{"name":"blepharo-cheilo-odontic syndrome caused by mutation in CDH1","type":"exact"},{"name":"blepharocheilodontic syndrome","type":"related"},{"name":"blepharocheilodontic syndrome 1","type":"exact"},{"name":"clefting, ectropion, and conical teeth","type":"related"},{"name":"ectropion, Inferior, with cleft 51P and/Or palate","type":"related"},{"name":"elschnig syndrome","type":"related"}],"termid":"MONDO:0054740","xrefs":{"Monarch":{"xref_id":"0054740"}}}


id: PBO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 1, Y-linked","termid":"PBO:0075249"}


id: PBO:0048831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma transducin 1","termid":"PBO:0048831"}


id: PBO:0054285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1676","termid":"PBO:0054285"}


id: PBO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-isopropylmalate synthase Leu3","termid":"PBO:0004159"}


id: GO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of mucus by the mucosa. Mucus is a viscous slimy secretion consisting of mucins and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes. The mucosa, or mucous membrane, is the membrane covered with epithelium that lines the tubular organs of the body. Mucins are carbohydrate-rich glycoproteins that have a lubricating and protective function.","definition_xrefs":["GOC:add","ISBN:068340007X","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mucus secretion","synonyms":[{"name":"mucus production","type":"exact"}],"termid":"GO:0070254"}


id: GO:1903468
data:
  {"annotated_genes":["SJAG_03160","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113870,119126],"is_not":false,"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication initiation involved in mitotic DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle DNA replication","termid":"GO:1903465"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication initiation","termid":"GO:1902975"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"positive regulation of DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication initiation involved in mitotic DNA replication","type":"narrow"},{"name":"activation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"narrow"},{"name":"positive regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1903468","terms_by_termid":{"GO:1903468":null}}


id: PBO:0108620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 3","termid":"PBO:0108620"}


id: PBO:0083452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CTI6/YPL181W","termid":"PBO:0083452"}


id: PBO:0031669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport","termid":"PBO:0031669"}


id: PBO:0068962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 206, pseudogene","termid":"PBO:0068962"}


id: GO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of cross-linked glycoproteins.","definition_xrefs":["PMID:7048321","PMID:18508691","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"glycoprotein network","secondary_identifiers":["Wikipedia:Extensin"],"synonyms":[{"name":"extensin","type":"exact"}],"termid":"GO:0048222"}


id: PBO:0073821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 1","termid":"PBO:0073821"}


id: MONDO:0015849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare vaginal malformation characterized by the presence of a complete or incomplete septum dividing the vagina into two parallel cavities, resulting from failure of reabsorption of the midline uterine septum between the two fused Müllerian ducts during embryogenesis. Patients are often asymptomatic, but may present with menorrhagia, dysmenorrhea, dyspareunia, infertility, or spontaneous abortion. The condition may occur as an isolated malformation or in association with other Müllerian duct anomalies (such as septate uterus or uterus didelphys) or renal abnormalities.","definition_xrefs":["Orphanet:180157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longitudinal vaginal septum","secondary_identifiers":["MEDGEN:331104","HP:0008740","ICD10CM:Q52.12","icd11.foundation:1594393492","UMLS:C1841680","GARD:20190"],"termid":"MONDO:0015849","xrefs":{"Monarch":{"xref_id":"0015849"}}}


id: PBO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_actin_filaments","termid":"PBO:0030016"}


id: PBO:0050643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 8, pseudogene","termid":"PBO:0050643"}


id: FYPO:0005794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is bent along the long axis when the cell undergoes transition from G0 phase to G1. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bent cell","termid":"FYPO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"bent cell during G0 to G1 transition","synonyms":[{"name":"bent cell during cell cycle re-entry at G1","type":"exact"},{"name":"bent cell during cell quiescence to G1 transition","type":"exact"},{"name":"bent cell during exit from cell quiescence into G1","type":"exact"},{"name":"bent cell during quiescence to G1 transition","type":"exact"},{"name":"bent cell during recovery from quiescence following G1 arrest","type":"exact"},{"name":"bent cell during recovery from quiescence into G1","type":"exact"}],"termid":"FYPO:0005794"}


id: GO:1903325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snoRNA metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"positively_regulates","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"positively_regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"positive regulation of snoRNA metabolic process","synonyms":[{"name":"activation of snoRNA metabolic process","type":"narrow"},{"name":"activation of snoRNA metabolism","type":"narrow"},{"name":"positive regulation of snoRNA metabolism","type":"exact"},{"name":"up regulation of snoRNA metabolic process","type":"exact"},{"name":"up regulation of snoRNA metabolism","type":"exact"},{"name":"up-regulation of snoRNA metabolic process","type":"exact"},{"name":"up-regulation of snoRNA metabolism","type":"exact"},{"name":"upregulation of snoRNA metabolic process","type":"exact"},{"name":"upregulation of snoRNA metabolism","type":"exact"}],"termid":"GO:1903325"}


id: GO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an acute inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acute inflammatory response","termid":"GO:0002673"}


id: PBO:0047997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXM1-regulated, gastric cancer associated","termid":"PBO:0047997"}


id: PBO:0091677
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in probabilistic modeling, the probability of entering mitosis increases as Cdc13 protein levels increase","termid":"PBO:0091677"}


id: PBO:0055726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMNTD2 antisense RNA 1","termid":"PBO:0055726"}


id: GO:0045219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of FasL.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of FasL production (obsolete GO:0045219)","synonyms":[{"name":"regulation of FasL anabolism","type":"exact"},{"name":"regulation of FasL biosynthesis","type":"exact"},{"name":"regulation of FasL formation","type":"exact"},{"name":"regulation of FasL synthesis","type":"exact"}],"termid":"GO:0045219"}


id: MONDO:0019340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleroderma is a rare autoimmune connective tissue disorder characterized by abnormal hardening of the skin and, sometimes, other organs. It is classified into two main forms: localized scleroderma and systemic sclerosis (SSc), the latter comprising three subsets; diffuse cutaneous SSc (dcSSc), limited cutaneous SSc (lcSSc) and limited SSc (lSSc).","definition_xrefs":["Orphanet:801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"scleroderma","secondary_identifiers":["EFO:1001993","UMLS:C0011644","GARD:18705","DOID:419","MedDRA:10039710","HP:0100324","MEDGEN:3770","NCIT:C26746"],"synonyms":[{"name":"dermatosclerosis","type":"exact"},{"name":"scleroderma","type":"exact"},{"name":"scleroderma (disease)","type":"exact"}],"termid":"MONDO:0019340","xrefs":{"Monarch":{"xref_id":"0019340"}}}


id: GO:0031312
data:
  {"annotated_genes":["SJAG_03563","SJAG_00655","SJAG_01249","SJAG_01043","SJAG_04642","SJAG_03456","SJAG_00933","SJAG_02699","SJAG_00576","SJAG_00852","SJAG_05398","SJAG_00230","SJAG_00721","SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102242,105556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"},{"annotations":[109980,61181,64692,111331,66208,103069,108012,62742,92646,108672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031314"},{"annotations":[109023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031315"},{"annotations":[96396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097629"},{"annotations":[96397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of an organelle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00655":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_02699":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04642":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of organelle membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to organelle membrane","type":"narrow"}],"termid":"GO:0031312","terms_by_termid":{"GO:0031314":null,"GO:0031315":null,"GO:0097629":null,"GO:0097632":null,"GO:0099616":null}}


id: PBO:0013789
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TPS1","termid":"PBO:0013789"}


id: MONDO:0957253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 13","secondary_identifiers":["OMIM:620357","MEDGEN:1841113","UMLS:C5830477"],"termid":"MONDO:0957253","xrefs":{"Monarch":{"xref_id":"0957253"}}}


id: PBO:0086701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may be involved in phosphatase regulation and/or generation of precursor metabolites and energy","termid":"PBO:0086701"}


id: PBO:0028300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028300"}


id: GO:0046345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"apocarotenoid catabolic process","termid":"GO:0043290"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"abscisic acid catabolic process","synonyms":[{"name":"abscisic acid breakdown","type":"exact"},{"name":"abscisic acid catabolism","type":"exact"},{"name":"abscisic acid degradation","type":"exact"}],"termid":"GO:0046345"}


id: MONDO:0020544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Streptococcal toxic-shock syndrome (streptococcal TSS) is an acute disease mediated by the production of superantigenic toxins characterized by the sudden onset of fever and other febrile symptoms, pain, multisystem organ involvement and potentially leading to coma, shock and death due to a Streptococcus pyogenes infection.","definition_xrefs":["Orphanet:99918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic shock syndrome","termid":"MONDO:0001881"},{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcal toxic-shock syndrome","secondary_identifiers":["icd11.foundation:197163558","UMLS:C0343532","SCTID:240451000","MEDGEN:575664","MedDRA:10044251","GARD:19709"],"synonyms":[{"name":"Streptococcus caused toxic shock syndrome","type":"exact"},{"name":"Streptococcus toxic shock syndrome","type":"exact"},{"name":"streptococcal TSS","type":"exact"}],"termid":"MONDO:0020544","xrefs":{"Monarch":{"xref_id":"0020544"}}}


id: PBO:0085879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; inhibits haploid invasive growth when overexpressed; synthetically lethal with phospholipase C (PLC1); expression induced by mild heat-stress on a non-fermentable carbon source, upon entry into stationary phase and upon nitrogen deprivation; repressed by inosine and choline in an Opi1p-dependent manner; highly conserved from bacteria to human; Memo, the human homolog, is an ErbB2 interacting protein with an essential function in cell motility","termid":"PBO:0085879"}


id: MONDO:0024636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the heart layer.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"inflammation of heart layer","secondary_identifiers":["MEDGEN:163689","ICD9:429.89","SCTID:399617002","UMLS:C0869523"],"synonyms":[{"name":"carditis","type":"exact"},{"name":"heart layer inflammation","type":"exact"}],"termid":"MONDO:0024636","xrefs":{"Monarch":{"xref_id":"0024636"}}}


id: PBO:0074614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 16A","termid":"PBO:0074614"}


id: GO:0045859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein kinase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein kinase activity","termid":"GO:0045859"}


id: PBO:0083867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein and component of SCF ubiquitin ligase complexes; involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; SCF-Ucc1 regulates level of Cit2 citrate synthase protein to maintain citrate homeostasis, acts as metabolic switch for glyoxylate cycle; UCC1 transcription is downregulated in cells grown on C2-compounds","termid":"PBO:0083867"}


id: PR:000050485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:33131769","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/UnPhos(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: Ras GTPase-activating-like protein rng2 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rng2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, PR:000026291","type":"narrow"},{"name":"rng2/UnPhos(S199,S207)","type":"exact"}],"termid":"PR:000050485"}


id: PBO:0079279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTK protein kinase","termid":"PBO:0079279"}


id: PR:Q10187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp6 gene.","definition_xrefs":["UniProtKB:Q10187","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.13","synonyms":[{"name":"Spom972h-ucp6","type":"exact"}],"termid":"PR:Q10187"}


id: GO:0071881
data:
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id: GO:0023052
data:
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id: GO:0050182
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id: PBO:0024805
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id: FYPO:0003082
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id: PBO:0111350
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id: GO:0007476
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id: MONDO:0100305
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id: MONDO:0020309
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id: GO:0000091
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id: PBO:0051702
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id: MONDO:0100609
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypophosphatasia in which the cause of the disease is an autosomal recessive loss-of-function in the ALPL gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"ALPL-related autosomal recessive hypophosphatasia","termid":"MONDO:0100609","xrefs":{"Monarch":{"xref_id":"0100609"}}}


id: PBO:0028952
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id: GO:0098579
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id: PBO:0038489
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id: GO:1903504
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id: GO:0016446
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id: FYPO:0004383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle","synonyms":[{"name":"advanced protein localization to mitotic spindle","type":"exact"},{"name":"precocious protein localization to mitotic spindle","type":"related"},{"name":"premature protein localisation to mitotic spindle","type":"exact"},{"name":"premature protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle during mitosis","type":"exact"},{"name":"premature protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004383"}


id: PBO:0120038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding vezatin family, impicated in actin cytoskeleton processes Inp2","termid":"PBO:0120038"}


id: PBO:0084407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidic acid (LPA) phosphatase, nucleotidase; principle and physiological nucleotidase working on GMP, UMP and CMP; involved in LPA hydrolysis in response to phosphate starvation and ribose salvage pathway; phosphatase activity is soluble and Mg2+ dependent; expression is induced by low phosphate levels and by inactivation of Pho85p; repressed by Gcn4p under normal conditions; PHM8 has a paralog, SDT1, that arose from the whole genome duplication","termid":"PBO:0084407"}


id: PBO:0003150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type","termid":"PBO:0003150"}


id: MONDO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare germ cell tumor.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare germ cell tumor (obsolete MONDO:0018080)","secondary_identifiers":["Orphanet:3399","SCTID:402878003"],"synonyms":[{"name":"germ cell tumor","type":"broad"},{"name":"rare germ cell tumor","type":"exact"}],"termid":"MONDO:0018080","xrefs":{"Monarch":{"xref_id":"0018080"}}}


id: GO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of touch in which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of touch","termid":"GO:0050975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:0050976"}


id: GO:0090349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of organohalogen metabolic process","termid":"GO:0090347"},{"relation_name":"negatively_regulates","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organohalogen metabolic process","termid":"GO:0090349"}


id: GO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"in utero embryonic development","termid":"GO:0001701"}


id: MONDO:0004759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zoophilia","secondary_identifiers":["MEDGEN:508916","UMLS:C0152186","DOID:9336","SCTID:81463002","ICD9:302.1"],"synonyms":[{"name":"bestiality","type":"exact"},{"name":"zoophilia","type":"exact"}],"termid":"MONDO:0004759","xrefs":{"Monarch":{"xref_id":"0004759"}}}


