# terms

id: PR:Q9P6L4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC688.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C688.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.12c","synonyms":[{"name":"Spom972h-SPAC688.12c","type":"exact"}],"termid":"PR:Q9P6L4"}


id: PBO:0086409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative glycoside hydrolase of the spore wall envelope; required for normal spore wall assembly, possibly for cross-linking between the glucan and chitosan layers; expressed during sporulation","termid":"PBO:0086409"}


id: FYPO:0004765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal cell population growth during glucose starvation","synonyms":[{"name":"normal cell population growth during glucose depletion","type":"exact"},{"name":"normal cell population growth during glucose deprivation","type":"exact"},{"name":"normal cell population growth during glucose limitation","type":"related"},{"name":"normal growth during glucose starvation","type":"broad"}],"termid":"FYPO:0004765"}


id: MONDO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Optic disk bodies composed primarily of acid mucopolysaccharides that may produce pseudopapilledema (elevation of the optic disk without associated intracranial hypertension) and visual field deficits. Drusen may also occur in the retina (see retinal drusen). (Miller et al., Clinical Neuro-Ophthalmology, 4th ed, p355)","definition_xrefs":["MESH:D015594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic disk drusen","secondary_identifiers":["SCTID:33629003","MEDGEN:14495","UMLS:C0029128","DOID:13561","ICD10CM:H47.32","ICD9:377.21"],"synonyms":[{"name":"drusen of optic disc","type":"exact"},{"name":"drusen of optic disk","type":"exact"},{"name":"optic nerve head drusen","type":"exact"}],"termid":"MONDO:0001746","xrefs":{"Monarch":{"xref_id":"0001746"}}}


id: GO:0004637
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72440],"is_not":false,"summary":null,"term":"GO:0004637"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-D-ribosylamine + ATP + glycine = N(1)-(5-phospho-D-ribosyl)glycinamide + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.4.13","RHEA:17453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYRIBONUCSYN-RXN","KEGG_REACTION:R04144","Reactome:R-HSA-73814"],"synonyms":[{"name":"2-amino-N-ribosylacetamide 5'-phosphate kinosynthase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"5-phospho-D-ribosylamine:glycine ligase (ADP-forming)","type":"related"},{"name":"GAR","type":"related"},{"name":"GAR synthetase activity","type":"related"},{"name":"GARS activity","type":"related"},{"name":"glycinamide ribonucleotide synthetase activity","type":"related"},{"name":"glycineamide ribonucleotide synthetase activity","type":"related"},{"name":"phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"phosphoribosylglycineamide synthetase activity","type":"related"}],"termid":"GO:0004637","terms_by_termid":{"GO:0004637":null}}


id: MONDO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the spermatic cord.","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spermatic cord cancer","secondary_identifiers":["UMLS:C0153603","DOID:13169","SCTID:363453008","MEDGEN:102278","ICD10CM:C63.1","ICD9:187.6","NCIT:C3559"],"synonyms":[{"name":"cancer of spermatic cord","type":"exact"},{"name":"malignant neoplasm of spermatic cord","type":"exact"},{"name":"malignant neoplasm of the spermatic cord","type":"exact"},{"name":"malignant spermatic cord neoplasm","type":"exact"},{"name":"malignant spermatic cord tumor","type":"exact"},{"name":"malignant spermatic cord tumour","type":"exact"},{"name":"malignant tumor of spermatic cord","type":"exact"},{"name":"malignant tumor of the spermatic cord","type":"exact"},{"name":"malignant tumour of spermatic cord","type":"exact"},{"name":"malignant tumour of the spermatic cord","type":"exact"},{"name":"spermatic cord Ca","type":"exact"},{"name":"spermatic cord cancer","type":"exact"}],"termid":"MONDO:0001654","xrefs":{"Monarch":{"xref_id":"0001654"}}}


id: MONDO:0024422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired or developmental cognitive disorders of AUDITORY PERCEPTION characterized by a reduced ability to perceive information contained in auditory stimuli despite intact auditory pathways. Affected individuals have difficulty with speech perception, sound localization, and comprehending the meaning of inflections of speech.","definition_xrefs":["MESH:D001308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"hearing disorder","termid":"MONDO:0021945"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auditory perceptual disorders","secondary_identifiers":["SCTID:229752008","MEDGEN:155527","UMLS:C0751257","NCIT:C84575"],"synonyms":[{"name":"Inattentions, auditory","type":"narrow"},{"name":"Psychoacoustical disorder","type":"narrow"},{"name":"Psychoacoustical disorders","type":"narrow"},{"name":"acoustic perceptual disorder","type":"narrow"},{"name":"acoustic perceptual disorders","type":"narrow"},{"name":"auditory Inattentions","type":"narrow"},{"name":"auditory comprehension disorder","type":"narrow"},{"name":"auditory comprehension disorders","type":"narrow"},{"name":"auditory inattention","type":"narrow"},{"name":"auditory perceptual disorder","type":"narrow"},{"name":"auditory processing disorder","type":"narrow"},{"name":"auditory processing disorders","type":"narrow"},{"name":"comprehension disorder, auditory","type":"narrow"},{"name":"comprehension disorders, auditory","type":"narrow"},{"name":"disorder of sensory perception of sound","type":"exact"},{"name":"disorder, Psychoacoustical","type":"narrow"},{"name":"disorder, acoustic perceptual","type":"narrow"},{"name":"disorder, auditory comprehension","type":"narrow"},{"name":"disorder, auditory processing","type":"narrow"},{"name":"disorders, Psychoacoustical","type":"narrow"},{"name":"disorders, acoustic perceptual","type":"narrow"},{"name":"disorders, auditory comprehension","type":"narrow"},{"name":"disorders, auditory processing","type":"narrow"},{"name":"inattention, auditory","type":"narrow"},{"name":"perceptual disorder, acoustic","type":"narrow"},{"name":"perceptual disorder, auditory","type":"narrow"},{"name":"perceptual disorders, acoustic","type":"narrow"},{"name":"perceptual disorders, auditory","type":"narrow"},{"name":"processing disorder, auditory","type":"narrow"},{"name":"processing disorders, auditory","type":"narrow"},{"name":"sensory perception of sound disease","type":"exact"}],"termid":"MONDO:0024422","xrefs":{"Monarch":{"xref_id":"0024422"}}}


id: PBO:0067072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 101, pseudogene","termid":"PBO:0067072"}


id: PBO:0090545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S21","termid":"PBO:0090545"}


id: PBO:0069371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 631, pseudogene","termid":"PBO:0069371"}


id: PATO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000215 respiratory function (obsolete PATO:0000215)","termid":"PATO:0000215"}


id: GO:0071933
data:
  {"annotated_genes":["SJAG_01732","SJAG_03455","SJAG_02228","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64334,76193,76941,105058],"is_not":false,"summary":null,"term":"GO:0071933"}]},"cv_name":"molecular_function","definition":"Binding to an Arp2/3 complex, a protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_02228":null,"SJAG_03455":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Arp2/3 complex binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0071933","terms_by_termid":{"GO:0071933":null}}


id: PBO:0044963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7C","termid":"PBO:0044963"}


id: PBO:0043505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3C","termid":"PBO:0043505"}


id: PBO:0048272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 9","termid":"PBO:0048272"}


id: GO:0032524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nutrients out of a cell or organelle.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nutrient export (obsolete GO:0032524)","synonyms":[{"name":"nutrient export","type":"exact"}],"termid":"GO:0032524"}


id: PR:O74972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein fyv4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.11","synonyms":[{"name":"Spom972h-SPBC4B4.11","type":"exact"}],"termid":"PR:O74972"}


id: PBO:0066308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 2","termid":"PBO:0066308"}


id: PBO:0076317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptopodin","termid":"PBO:0076317"}


id: MONDO:0006028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the caecum","direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenocarcinoma","termid":"MONDO:0002271"},{"relation_name":"is_a","term_name":"cecum carcinoma","termid":"MONDO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cecum adenocarcinoma","secondary_identifiers":["UMLS:C1332866","DOID:3039","EFO:1000020","MEDGEN:234098","SCTID:413446001","NCIT:C5543"],"synonyms":[{"name":"adenocarcinoma of cecum","type":"exact"},{"name":"adenocarcinoma of the cecum","type":"exact"},{"name":"caecum adenocarcinoma","type":"exact"},{"name":"cecal adenocarcinoma","type":"exact"},{"name":"cecum adenocarcinoma","type":"exact"}],"termid":"MONDO:0006028","xrefs":{"Monarch":{"xref_id":"0006028"}}}


id: PBO:0073225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semenogelin 1","termid":"PBO:0073225"}


id: PBO:0117414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 9","termid":"PBO:0117414"}


id: MONDO:0016638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital afibrinogenemia","termid":"MONDO:0008737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial hypodysfibrinogenemia","secondary_identifiers":["MEDGEN:347987","GARD:17202","Orphanet:248408","UMLS:C1859970"],"termid":"MONDO:0016638","xrefs":{"Monarch":{"xref_id":"0016638"}}}


id: GO:0039721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed at the periphery of the host cell nucleus by Baculoviruses.","definition_xrefs":["PMID:18434402","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"peristromal region viral factory","synonyms":[{"name":"PR","type":"related"}],"termid":"GO:0039721"}


id: GO:0034612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tumor necrosis factor","synonyms":[{"name":"response to TNF","type":"exact"}],"termid":"GO:0034612"}


id: GO:0102678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5alpha,22S,24R)-22-hydroxyergostan-3-one + NADP = H+ + (22S)-22-hydroxycampest-4-en-3-one + NADPH.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 22-alpha-hydroxy-campest-4-en-3-one,NADPH:steroid 5alpha-reductase activity (obsolete GO:0102678)","termid":"GO:0102678"}


id: PBO:0053887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1167","termid":"PBO:0053887"}


id: PBO:0061273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOX4 pseudogene 1","termid":"PBO:0061273"}


id: GO:0047742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chenodeoxycholoyltaurine + H2O = chenodeoxycholate + taurine.","definition_xrefs":["MetaCyc:CHENODEOXYCHOLOYLTAURINE-HYDROLASE-RXN","EC:3.5.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"chenodeoxycholoyltaurine hydrolase activity","secondary_identifiers":["RHEA:16309"],"synonyms":[{"name":"chenodeoxycholoyltaurine amidohydrolase activity","type":"related"}],"termid":"GO:0047742"}


id: GO:0070901
data:
  {"annotated_genes":["SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79789],"is_not":false,"summary":null,"term":"GO:0070901"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00255":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA methylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070901","terms_by_termid":{"GO:0070901":null}}


id: MONDO:0019642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypocalcemic vitamin D-resistant rickets (HVDRR) is a hereditary disorder of vitamin D action characterized by hypocalcemia, severe rickets and in many cases alopecia.","definition_xrefs":["Orphanet:93160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcemic rickets","termid":"MONDO:0017323"},{"relation_name":"is_a","term_name":"vitamin D-dependent rickets","termid":"MONDO:0024299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 2","secondary_identifiers":["icd11.foundation:2041886796","SCTID:72831007","NANDO:1200783","MEDGEN:760752","UMLS:C3536983","ICD10CM:E83.3","NCIT:C131077","GARD:16805"],"synonyms":[{"name":"HVDRR","type":"exact"},{"name":"VDDR II","type":"exact"},{"name":"VDDR2","type":"exact"},{"name":"VDRR II","type":"exact"},{"name":"hereditary 1,25 dihydroxyvitamin D-resistant rickets with abnormal Vitamin D receptor","type":"exact"},{"name":"hereditary vitamin D-resistant rickets","type":"exact"},{"name":"hypocalcemic vitamin D-resistant rickets","type":"exact"},{"name":"vitamin D dependent rickets 2","type":"exact"},{"name":"vitamin D receptor deficiency","type":"exact"},{"name":"vitamin D-dependent rickets type II","type":"exact"},{"name":"vitamin D-dependent rickets, type 2","type":"exact"},{"name":"vitamin D-resistant rickets type II","type":"exact"}],"termid":"MONDO:0019642","xrefs":{"Monarch":{"xref_id":"0019642"}}}


id: PR:Q10495
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.08c gene.","definition_xrefs":["UniProtKB:Q10495","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26F1.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.08c","synonyms":[{"name":"Spom972h-SPAC26F1.08c","type":"exact"}],"termid":"PR:Q10495"}


id: MOD:00545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00927. Remap to MOD:00927.","definition_xrefs":["PubMed:14670044"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00545 deuterated dimethyl labeling (D) (obsolete MOD:00545)","termid":"MOD:00545"}


id: MONDO:0011506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, infantile epilepsy syndrome disease characterized by neonatal- to infancy-onset myoclonic focal seizures occurring in various members of a family, associated in some with mild dysarthria, ataxia and borderline-to-moderate intellectual disability.","definition_xrefs":["Orphanet:352582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial infantile myoclonic epilepsy","secondary_identifiers":["GARD:17521","UMLS:C0917800","OMIM:605021","MEDGEN:181488"],"synonyms":[{"name":"Eim","type":"related"},{"name":"FIME","type":"exact"},{"name":"familial infantile myoclonus epilepsy","type":"exact"},{"name":"myoclonic epilepsy, familial infantile","type":"related"},{"name":"myoclonic epilepsy, infantile, familial","type":"exact"}],"termid":"MONDO:0011506","xrefs":{"Monarch":{"xref_id":"0011506"}}}


id: GO:2000271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of fibroblast apoptotic process","termid":"GO:2000269"},{"relation_name":"positively_regulates","term_name":"fibroblast apoptotic process","termid":"GO:0044346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast apoptotic process","synonyms":[{"name":"positive regulation of fibroblast apoptosis","type":"narrow"}],"termid":"GO:2000271"}


id: FYPO:0003133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"},{"relation_name":"is_a","term_name":"decreased cell wall galactomannan level","termid":"FYPO:0002265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"galactomannan absent from cell wall","synonyms":[{"name":"galactomannan absent from cell surface","type":"related"},{"name":"galactomannan absent from cell wall during mitotic cell cycle","type":"related"},{"name":"galactomannan absent from cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0003133"}


id: PBO:0060662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal calcium sensor 1","termid":"PBO:0060662"}


id: PBO:0054536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1936","termid":"PBO:0054536"}


id: PBO:0017891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1242 family protein, likely secretory pathway component Ksh1 (predicted)","termid":"PBO:0017891"}


id: GO:0098717
data:
  {"annotated_genes":["SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74149],"is_not":false,"summary":null,"term":"GO:0098717"}]},"cv_name":"biological_process","definition":"The directed movement of pantothenate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pantothenate transmembrane transport","termid":"GO:0015887"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"pantothenate import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:1901688","GO:0044755"],"synonyms":[{"name":"pantothenate import","type":"related"},{"name":"pantothenate import into cell","type":"exact"}],"termid":"GO:0098717","terms_by_termid":{"GO:0098717":null}}


id: GO:0031169
data:
  {"annotated_genes":["SJAG_00469","SJAG_04032","SJAG_04031","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59554,95885,107199],"is_not":false,"summary":null,"term":"GO:0031169"},{"annotations":[95831],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ferrichrome. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymate-containing siderophore biosynthetic process","termid":"GO:0019539"},{"relation_name":"is_a","term_name":"ferrichrome metabolic process","termid":"GO:0031168"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ferrichrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0031199","GO:0031200"],"synonyms":[{"name":"ferrichrome anabolism","type":"exact"},{"name":"ferrichrome biosynthesis","type":"exact"},{"name":"ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"ferrichrome formation","type":"exact"},{"name":"ferrichrome synthesis","type":"exact"}],"termid":"GO:0031169","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: PBO:0088889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ/DUF1977, human DNAJB12 homolog, Hsp70 co-chaperone","termid":"PBO:0088889"}


id: MONDO:0014138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive myopathy caused by mutations in the KLHL40 gene, encoding Kelch-like protein 40. The phenotype is highly variable, and as such attempts at classification by clinical features is not optimal. Generally, affected individuals have generalized muscle weakness, and typically involves proximal muscles, the face, bulbar and respiratory muscles.","definition_xrefs":["NCIT:C129871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 8","secondary_identifiers":["OMIM:615348","UMLS:C3809209","MEDGEN:815539","DOID:0110930","GARD:15946"],"synonyms":[{"name":"KLHL40 nemaline myopathy","type":"exact"},{"name":"NEM8","type":"exact"},{"name":"nemaline myopathy 8","type":"exact"},{"name":"nemaline myopathy 8, autosomal recessive","type":"exact"},{"name":"nemaline myopathy caused by mutation in KLHL40","type":"exact"},{"name":"nemaline myopathy type 8","type":"exact"}],"termid":"MONDO:0014138","xrefs":{"Monarch":{"xref_id":"0014138"}}}


id: PBO:0048400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 6","termid":"PBO:0048400"}


id: PBO:0041353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4A antisense RNA 1","termid":"PBO:0041353"}


id: GO:2000547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell dendrite assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"dendritic cell dendrite assembly","termid":"GO:0097026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell dendrite assembly","synonyms":[{"name":"regulation of dendritic extension","type":"related"}],"termid":"GO:2000547"}


id: PATO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001066 absolute stiffness (obsolete PATO:0001066)","termid":"PATO:0001066"}


id: FYPO:0007642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal at ribosomal DNA during G0 phase.","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during G0","termid":"FYPO:0007641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at rDNA during G0","synonyms":[{"name":"decreased histone H3 K9 dimethylation at rDNA during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at ribosomal DNA during G0","type":"exact"},{"name":"decreased histone H3K9 dimethylation at rDNA during G0","type":"exact"},{"name":"decreased histone H3K9me2 dimethylation at rDNA during G0","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at rDNA during G0","type":"exact"}],"termid":"FYPO:0007642"}


id: PBO:0084642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein; component of the interface between microtubules and kinetochore, involved in sister chromatid separation; essential in polyploid cells but not in haploid or diploid cells; promotes plus-end directed movement of Dyn1p; ortholog of mammalian CLIP-170","termid":"PBO:0084642"}


id: GO:1900608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tensidol B.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tensidol B metabolic process","termid":"GO:1900606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"tensidol B biosynthetic process","synonyms":[{"name":"tensidol B anabolism","type":"exact"},{"name":"tensidol B biosynthesis","type":"exact"},{"name":"tensidol B formation","type":"exact"},{"name":"tensidol B synthesis","type":"exact"}],"termid":"GO:1900608"}


id: PBO:0075525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E5","termid":"PBO:0075525"}


id: GO:0072549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monocoumaroyl dicaffeoyl spermidine + NADPH + O2 = tricaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity","termid":"GO:0072549"}


id: PBO:0091765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi at silenced MAT3 locus","termid":"PBO:0091765"}


id: MONDO:0008448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spheroid body myopathy (obsolete MONDO:0008448)","termid":"MONDO:0008448","xrefs":{"Monarch":{"xref_id":"0008448"}}}


id: PBO:0087439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit F of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane; the V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087439"}


id: GO:0090092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090092"}


id: PBO:0051067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4/OR15-4A (non-functional)","termid":"PBO:0051067"}


id: PBO:0045629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 41 (pseudogene)","termid":"PBO:0045629"}


id: PR:Q7LL00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- opt3 gene.","definition_xrefs":["UniProtKB:Q7LL00","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oligopeptide transporter C1840.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.12","synonyms":[{"name":"Spom972h-opt3","type":"exact"}],"termid":"PR:Q7LL00"}


id: MONDO:0010057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, Ryukyuan type","secondary_identifiers":["MESH:C536881","OMIM:271200","UMLS:C1849102","GARD:9646","MEDGEN:376517"],"synonyms":[{"name":"Ryukyuan muscular atrophy","type":"related"},{"name":"spinal muscular atrophy Ryukyuan type","type":"related"},{"name":"spinal muscular atrophy, Ryukyuan type","type":"exact"}],"termid":"MONDO:0010057","xrefs":{"Monarch":{"xref_id":"0010057"}}}


id: PBO:0117192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENHO antisense RNA 1","termid":"PBO:0117192"}


id: GO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","secondary_identifiers":["Reactome:R-HSA-1236975"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class I","type":"exact"},{"name":"antigen presentation, exogenous antigen via major histocompatibility complex class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross priming","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"cross-priming","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0042590"}


id: MONDO:0013567
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87701,87702],"is_not":false,"summary":null,"term":"MONDO:0013567"}]},"cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the MYH6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3279790","DOID:0110108","MEDGEN:481420","OMIM:614089","MESH:C563540","GARD:15755"],"synonyms":[{"name":"ASD3","type":"exact"},{"name":"MYH6 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in MYH6","type":"exact"},{"name":"atrial heart septal defect type 3","type":"exact"},{"name":"atrial septal defect 3","type":"exact"},{"name":"atrial septal defect type 3","type":"exact"}],"termid":"MONDO:0013567","terms_by_termid":{"MONDO:0013567":null},"xrefs":{"Monarch":{"xref_id":"0013567"}}}


id: PBO:0055295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2722","termid":"PBO:0055295"}


id: PBO:0109976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated heterodimeric guanine nucleotide exchange factor (GEF) subunit Aut12","termid":"PBO:0109976"}


id: PBO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS3 and NABP interacting protein","termid":"PBO:0051684"}


id: MONDO:0031062
data:
  {"annotated_genes":["SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87494],"is_not":false,"summary":null,"term":"MONDO:0031062"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"polycystic kidney disease 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620056","DOID:0060952","MEDGEN:1823995","UMLS:C5774222"],"synonyms":[{"name":"PKD7","type":"exact"},{"name":"polycystic kidney disease 7","type":"exact"}],"termid":"MONDO:0031062","terms_by_termid":{"MONDO:0031062":null},"xrefs":{"Monarch":{"xref_id":"0031062"}}}


id: PBO:0113381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipid transport protein; peripheral membrane protein required for vesicle formation during autophagy, pexophagy and the CVT pathway; directed to autophagic membranes by Atg18p where it acts as a PAS-ER membrane tether during autophagosome formation; involved in Atg9p cycling between the PAS and mitochondria; binds the phospholipid PI(3)P via an APT1 domain; essential for cell cycle progression from G2/M to G1 under nitrogen starvation; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0113381"}


id: SO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_oligo","synonyms":[{"name":"double stranded oligonucleotide","type":"exact"},{"name":"ds oligo","type":"exact"},{"name":"ds-oligonucleotide","type":"exact"}],"termid":"SO:0000442"}


id: PBO:0060631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK interacting protein with SH3 domain","termid":"PBO:0060631"}


id: PBO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 40","termid":"PBO:0050130"}


id: PBO:0065292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired related homeobox 2","termid":"PBO:0065292"}


id: PBO:0080453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visinin like 1","termid":"PBO:0080453"}


id: PR:000059626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inner kinetochore subunit cnp20 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Ser-3, Thr-8, Ser-12, Ser-13, Ser-14, Thr-21, Ser-23, Thr-29, Ser-31, Ser-33, Thr-36, Ser-39, Thr-43, and Thr-45 of the amino acid sequence represented by UniProtKB:Q9HGK9. Example: UniProtKB:Q9HGK9, Ser-3/Thr-8/Ser-12/Ser-13/Ser-14/Thr-21/Ser-23/Thr-29/Ser-31/Ser-33/Thr-36/Ser-39/Thr-43/Thr-45, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:34810257","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cnp20/UnPhos-CIM","pombase_gene_id":"SPBC800.13","synonyms":[{"name":"Cnp20/UnPhos-CIM","type":"exact"},{"name":"PomBase_original_PRO_term_name: inner kinetochore subunit cnp20 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cnp20/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q9HGK9, Ser-3/Thr-8/Ser-12/Ser-13/Ser-14/Thr-21/Ser-23/Thr-29/Ser-31/Ser-33/Thr-36/Ser-39/Thr-43/Thr-45, PR:000026291","type":"narrow"}],"termid":"PR:000059626"}


id: PBO:0043465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 6","termid":"PBO:0043465"}


id: GO:0097372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 18) + NAD+ + H2O = histone H3 L-lysine (position 18) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K18 to NAD, producing nicotinamide.","definition_xrefs":["GOC:sp","PMID:22722849","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0033558","GO:0003824","GO:0140096","GO:0019213","GO:0016746"],"is_obsolete":false,"name":"histone H3K18 deacetylase activity, NAD-dependent","synonyms":[{"name":"NAD-dependent histone H3-K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K18 specific)","type":"exact"}],"termid":"GO:0097372"}


id: GO:0006054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-acetylneuraminate metabolic process","synonyms":[{"name":"N-acetylneuraminate metabolism","type":"exact"},{"name":"sialic acid metabolic process","type":"broad"},{"name":"sialic acid metabolism","type":"broad"}],"termid":"GO:0006054"}


id: PBO:0004715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Shk1","termid":"PBO:0004715"}


id: PBO:0012295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit Spt16","termid":"PBO:0012295"}


id: PBO:0071333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 10","termid":"PBO:0071333"}


id: PBO:0045878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 2","termid":"PBO:0045878"}


id: PBO:0067986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 288","termid":"PBO:0067986"}


id: GO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction:(2E,6E,10E)-geranylgeranyl diphosphate + sn-glycerol 1-phosphate = diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate.","definition_xrefs":["PMID:17253090","PMID:8408023","PMID:12801917"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-3-O-geranylgeranylglyceryl phosphate synthase activity (obsolete GO:0043889)","synonyms":[{"name":"(S)-3-O-geranylgeranylglycerylphosphate synthase activity","type":"exact"},{"name":"(S)-GGGP synthase activity","type":"exact"},{"name":"GGGP synthase activity","type":"exact"},{"name":"GGGPS","type":"exact"}],"termid":"GO:0043889"}


id: PBO:0087303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI complex-associated protein; involved in 3'-5' degradation of long 3'UTR-containing mRNA, poorly translated mRNA, and other RNA regions devoid of ribosomes; proposed to assist the cytoplasmic exosome in a Ska1-SKI complex when a direct interaction between the ribosome and the SKI complex is absent","termid":"PBO:0087303"}


id: MONDO:0009259
data:
  {"annotated_genes":["SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87643],"is_not":false,"summary":null,"term":"MONDO:0009259"}]},"cv_name":"mondo","definition":"A disorder that is principally characterized by hemolytic anemia, (usually rather mild), however, the presence of neurological symptoms has also been reported.","definition_xrefs":["Orphanet:33574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"anemia due to enzyme disorder","termid":"MONDO:0020584"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0019241","MONDO:0005570"],"is_obsolete":false,"name":"gamma-glutamylcysteine synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565557","MEDGEN:347272","OMIM:230450","UMLS:C1856603","DOID:0111681","GARD:16631","ICD9:270.8","SCTID:36799008"],"synonyms":[{"name":"anemia, congenital, nonspherocytic hemolytic, 7","type":"exact"},{"name":"gamma-glutamylcysteine synthetase deficiency, hemolytic anaemia due to","type":"exact"},{"name":"gamma-glutamylcysteine synthetase deficiency, hemolytic anemia due to","type":"exact"},{"name":"glutamate-cysteine ligase deficiency","type":"exact"},{"name":"hemolytic anaemia due to gamma-glutamylcysteine synthetase deficiency","type":"exact"},{"name":"hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency","type":"exact"},{"name":"inborn error of glutamate-cysteine ligase activity","type":"exact"},{"name":"inborn glutamate-cysteine ligase activity disorder","type":"exact"},{"name":"rare inborn error of glutamate-cysteine ligase activity","type":"exact"}],"termid":"MONDO:0009259","terms_by_termid":{"MONDO:0009259":null},"xrefs":{"Monarch":{"xref_id":"0009259"}}}


id: GO:0010239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the chloroplast genome into mature mRNAs.","definition_xrefs":["GOC:tb","PMID:9648738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"chloroplast RNA processing","termid":"GO:0031425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"chloroplast mRNA processing","termid":"GO:0010239"}


id: PBO:0058055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4276","termid":"PBO:0058055"}


id: FYPO:0005379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal spindle pole body organization","termid":"FYPO:0005378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle pole body","synonyms":[{"name":"normal SPB","type":"exact"}],"termid":"FYPO:0005379"}


id: PBO:0050562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG and FETUB antisense RNA 1","termid":"PBO:0050562"}


id: GO:0061686
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105424],"is_not":false,"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (hercynine) + O2 = hercynylcysteine sulfoxide + H2O.","definition_xrefs":["RHEA:42704","PMID:4276459","GOC:dph","PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.3.10"],"synonyms":[{"name":"hercynylcysteine S-oxide synthase","type":"exact"},{"name":"hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0061686","terms_by_termid":{"GO:0061686":null}}


id: PBO:0045004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIM1 dimethyladenosine transferase 1 homolog pseudogene 1","termid":"PBO:0045004"}


id: GO:0060956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell differentiation","termid":"GO:0060956"}


id: PBO:0030993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_salt_stress","termid":"PBO:0030993"}


id: PBO:0059012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMEL1 antisense RNA 1","termid":"PBO:0059012"}


id: GO:0004946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with bombesin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"bombesin receptor activity","termid":"GO:0004946"}


id: MONDO:1011846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic dysplasia, non-human animal","secondary_identifiers":["OMIA:000535"],"termid":"MONDO:1011846","xrefs":{"Monarch":{"xref_id":"1011846"}}}


id: GO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"myosin filament assembly","synonyms":[{"name":"myosin polymerization","type":"related"}],"termid":"GO:0031034"}


id: MONDO:0010231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 20","secondary_identifiers":["DOID:0112023","MEDGEN:208677","OMIM:300047","MESH:C563142","UMLS:C0796226","GARD:22667"],"synonyms":[{"name":"MRX20","type":"exact"},{"name":"intellectual disability, X-linked 20","type":"exact"},{"name":"mental retardation, X-linked 20","type":"related"}],"termid":"MONDO:0010231","xrefs":{"Monarch":{"xref_id":"0010231"}}}


id: MONDO:0005581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant lymphoma of the bursa of Fabricius, induced by avian leukosis virus occurring in birds.","definition_xrefs":["EFO:0005923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL induced bursal lymphoma","termid":"MONDO:0005581","xrefs":{"Monarch":{"xref_id":"0005581"}}}


id: PR:O60071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- enp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.09","synonyms":[{"name":"Spom972h-enp1","type":"exact"}],"termid":"PR:O60071"}


id: GO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanoate, 2-methylbutanoate, or 2-methylpropanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to carboxylic acid via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to carboxylic acid via Ehrlich pathway","type":"exact"}],"termid":"GO:0000953"}


id: PBO:0055292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2719","termid":"PBO:0055292"}


id: GO:0071349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-12","termid":"GO:0070671"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-12","synonyms":[{"name":"cellular response to IL-12","type":"exact"}],"termid":"GO:0071349"}


id: MOD:01880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["RESID:AA0564","PubMed:16452303","ChEBI:50038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"4-aminobutylated residue","termid":"MOD:01884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-deoxyhypusine","synonyms":[{"name":"(2S)-2-amino-6-[(4-aminobutyl)amino]hexanoic acid","type":"exact"},{"name":"L-deoxyhypusine","type":"exact"},{"name":"MOD_RES Deoxyhypusine","type":"exact"},{"name":"N6-(4-aminobutyl)lysine","type":"exact"},{"name":"deoxyhypusine","type":"exact"}],"termid":"MOD:01880"}


id: PBO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.30","termid":"PBO:0000268"}


id: GO:0003210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac atrium from unspecified parts. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber formation","termid":"GO:0003207"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac atrium formation","termid":"GO:0003210"}


id: MONDO:0013613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the KCNJ13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 16","secondary_identifiers":["GARD:10885","UMLS:C3280062","ICD10CM:H35.5","MEDGEN:481692","OMIM:614186","DOID:0110118"],"synonyms":[{"name":"KCNJ13 Leber congenital amaurosis","type":"exact"},{"name":"LCA16","type":"exact"},{"name":"Leber congenital amaurosis 16","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in KCNJ13","type":"exact"},{"name":"Leber congenital amaurosis type 16","type":"exact"}],"termid":"MONDO:0013613","xrefs":{"Monarch":{"xref_id":"0013613"}}}


id: PBO:0047543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 2","termid":"PBO:0047543"}


id: MONDO:0011140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign familial neonatal-infantile seizures (obsolete MONDO:0011140)","termid":"MONDO:0011140","xrefs":{"Monarch":{"xref_id":"0011140"}}}


id: GO:1901104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracenomycin C.","definition_xrefs":["UniPathway:UPA00174","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"tetracenomycin C metabolic process","synonyms":[{"name":"tetracenomycin C metabolism","type":"exact"}],"termid":"GO:1901104"}


id: PBO:0028257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ornithine_carbamoyltransferase_activity","termid":"PBO:0028257"}


id: PBO:0086608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; gene expression regulated by copper levels","termid":"PBO:0086608"}


id: PBO:0002684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl-sulfate kinase (predicted)","termid":"PBO:0002684"}


id: MONDO:0008583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital benign lesion that occurs in the distal sternocleidomastoid muscle of infants. It is characterized by the presence of plump spindle cells, and collagenous stroma formation.","definition_xrefs":["NCIT:C4811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibromatosis","termid":"MONDO:0005031"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited torticollis","secondary_identifiers":["MESH:C535425","SCTID:268240006","UMLS:C0040485","GARD:4908","OMIM:189600","SCTID:70070008","MEDGEN:11859","ICD9:723.5","HP:0000473"],"synonyms":[{"name":"congenital muscular torticollis","type":"related"},{"name":"congenital sternomastoid torticollis","type":"related"},{"name":"congenital torticollis","type":"exact"},{"name":"congenital wry neck","type":"related"},{"name":"congenital wryneck","type":"related"},{"name":"contracture of sternocleidomastoid muscle","type":"related"},{"name":"familial spasmodic torticollis","type":"related"},{"name":"familial torticollis","type":"related"},{"name":"fibromatosis colli","type":"exact"},{"name":"inherited torticollis (disease)","type":"exact"},{"name":"torticollis","type":"exact"},{"name":"torticollis, congenital","type":"related"},{"name":"torticollis, familial","type":"related"}],"termid":"MONDO:0008583","xrefs":{"Monarch":{"xref_id":"0008583"}}}


id: PBO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 197 pseudogene","termid":"PBO:0070254"}


id: GO:0106289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of deadenylation-dependent decapping of nuclear-transcribed mRNA.","definition_xrefs":["PMID:32354837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106288"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0000290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106289"}


id: PBO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor Spt5","termid":"PBO:0000754"}


id: GO:0050242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H+ + phosphoenolpyruvate.","definition_xrefs":["RHEA:10756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"pyruvate, phosphate dikinase activity","secondary_identifiers":["KEGG_REACTION:R00206","EC:2.7.9.1","MetaCyc:PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN"],"synonyms":[{"name":"ATP:pyruvate, phosphate phosphotransferase activity","type":"related"},{"name":"PPDK","type":"related"},{"name":"orthophosphate dikinase pyruvate","type":"related"},{"name":"pyruvate, Pi dikinase activity","type":"related"},{"name":"pyruvate,orthophosphate dikinase activity","type":"related"},{"name":"pyruvate,phosphate dikinase activity","type":"related"},{"name":"pyruvate-inorganic phosphate dikinase activity","type":"related"},{"name":"pyruvate-phosphate dikinase (phosphorylating)","type":"related"},{"name":"pyruvate-phosphate dikinase activity","type":"related"},{"name":"pyruvate-phosphate ligase activity","type":"related"},{"name":"pyruvic-phosphate dikinase activity","type":"related"},{"name":"pyruvic-phosphate ligase activity","type":"related"}],"termid":"GO:0050242"}


id: GO:0019875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(6-aminohexanoyl)-6-aminohexanoate + H2O = 2 6-aminohexanoate.","definition_xrefs":["EC:3.5.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-aminohexanoate-dimer hydrolase activity","secondary_identifiers":["MetaCyc:RXN-3962","RHEA:21364","UM-BBD_enzymeID:r1096"],"synonyms":[{"name":"6-aminohexanoic acid oligomer hydrolase activity","type":"related"},{"name":"N-(6-aminohexanoyl)-6-aminohexanoate amidohydrolase activity","type":"related"}],"termid":"GO:0019875"}


id: PBO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit","termid":"PBO:0044688"}


id: GO:1902879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway involved in spinal cord association neuron specification.","definition_xrefs":["PMID:21730158","GOC:mr","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:1902879)","synonyms":[{"name":"down regulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down-regulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down-regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down-regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down-regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"downregulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"downregulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"downregulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"downregulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"inhibition of BMP signaling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"inhibition of BMP signalling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"inhibition of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"inhibition of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"negative regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:1902879"}


id: MONDO:0014213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"},{"relation_name":"is_a","term_name":"CTCF-related neurodevelopmental disorder","termid":"MONDO:0700294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092","MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability-feeding difficulties-developmental delay-microcephaly syndrome","secondary_identifiers":["MEDGEN:816016","OMIM:615502","GARD:17566","Orphanet:363611","UMLS:C3809686","DOID:0070051"],"synonyms":[{"name":"MRD21","type":"exact"},{"name":"autosomal dominant intellectual disability 21","type":"exact"},{"name":"autosomal dominant mental retardation 21","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 21","type":"related"},{"name":"intellectual disability, autosomal dominant 21","type":"related"},{"name":"intellectual disability, autosomal dominant type 21","type":"exact"},{"name":"mental retardation, autosomal dominant 21","type":"related"},{"name":"mental retardation, autosomal dominant type 21","type":"exact"}],"termid":"MONDO:0014213","xrefs":{"Monarch":{"xref_id":"0014213"}}}


id: PBO:0064761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E","termid":"PBO:0064761"}


id: PBO:0029618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0029618"}


id: GO:1905774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent DNA helicase activity.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:13679365","PMID:19734539"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA helicase activity (obsolete GO:1905774)","synonyms":[{"name":"regulation of ATP-dependent DNA helicase activity","type":"exact"}],"termid":"GO:1905774"}


id: GO:0030975
data:
  {"annotated_genes":["SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68442],"is_not":false,"summary":null,"term":"GO:0030975"}]},"cv_name":"molecular_function","definition":"Binding to thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thiamine binding","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"thiamin binding","type":"exact"},{"name":"vitamin B1 binding","type":"exact"}],"termid":"GO:0030975","terms_by_termid":{"GO:0030975":null}}


id: GO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the shaping of the coronary vasculature.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"},{"relation_name":"part_of","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition involved in coronary vasculature morphogenesis","termid":"GO:0003201"}


id: GO:1904268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell chemotaxis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16203995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"positive regulation of Schwann cell migration","termid":"GO:1900149"},{"relation_name":"is_a","term_name":"regulation of Schwann cell chemotaxis","termid":"GO:1904266"},{"relation_name":"positively_regulates","term_name":"Schwann cell chemotaxis","termid":"GO:1990751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell chemotaxis","synonyms":[{"name":"activation of Schwann cell chemotaxis","type":"narrow"},{"name":"up regulation of Schwann cell chemotaxis","type":"exact"},{"name":"up-regulation of Schwann cell chemotaxis","type":"exact"},{"name":"upregulation of Schwann cell chemotaxis","type":"exact"}],"termid":"GO:1904268"}


id: MONDO:1012700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary connective tissue disorder characterized by extensive fibrosis of the skin and joints that occurs in dogs due to a mutation in the ADAMTSL2 gene.","definition_xrefs":["PMID:28158899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geleophysic dysplasia, ADMATSL2-related, dog","secondary_identifiers":["OMIA:001509-9615"],"synonyms":[{"name":"Chinese beagle syndrome, dog","type":"related"},{"name":"Musladin-Lueke syndrome","type":"exact"}],"termid":"MONDO:1012700","xrefs":{"Monarch":{"xref_id":"1012700"}}}


id: PBO:0041561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 73","termid":"PBO:0041561"}


id: PBO:0059051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific nuclear structural 1","termid":"PBO:0059051"}


id: GO:0060583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the localization of an actin cortical patch. An actin cortical patch is a discrete actin-containing structure found just beneath the plasma membrane in fungal cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"actin cortical patch localization","termid":"GO:0051666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin cortical patch localization","synonyms":[{"name":"regulation of actin cortical patch localisation","type":"exact"}],"termid":"GO:0060583"}


id: MONDO:0005958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sex cord-stromal tumor (obsolete MONDO:0005958)","termid":"MONDO:0005958","xrefs":{"Monarch":{"xref_id":"0005958"}}}


id: GO:0015081
data:
  {"annotated_genes":["SJAG_04616","SJAG_04167","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[79792,81746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of sodium ions (Na+) from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0022816"],"synonyms":[{"name":"sodium transporter activity","type":"exact"}],"termid":"GO:0015081","terms_by_termid":{"GO:0008554":null,"GO:0015385":null}}


id: GO:0010786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles that will move from the trans-Golgi to the endosome, forming a vesicle coat.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coating of Golgi vesicle","termid":"GO:0048202"},{"relation_name":"part_of","term_name":"vesicle targeting, trans-Golgi to endosome","termid":"GO:0048203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0044085","GO:0065003","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle, trans-Golgi to endosome targeting","termid":"GO:0010786"}


id: PBO:0070496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 31","termid":"PBO:0070496"}


id: FYPO:0001171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular pH","synonyms":[{"name":"decreased cellular pH during mitotic cell cycle","type":"related"},{"name":"decreased cellular pH during vegetative growth","type":"exact"},{"name":"decreased cellular pH level","type":"exact"},{"name":"reduced cellular pH","type":"exact"}],"termid":"FYPO:0001171"}


id: PBO:0080476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 1-2","termid":"PBO:0080476"}


id: PBO:0076767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 6","termid":"PBO:0076767"}


id: GO:0070481
data:
  {"annotated_genes":["SJAG_03179","SJAG_04818","SJAG_01818","SJAG_01218","SJAG_04084","SJAG_04321","SJAG_04006","SJAG_00226","SJAG_04118","SJAG_01521","SJAG_04824","SJAG_00854","SJAG_04283","SJAG_04153","SJAG_03805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63331,94852,97700,99027,103030,103880,106201,107069,108281,109276,110648,117729,117990,119077,120171],"is_not":false,"summary":null,"term":"GO:0070481"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that is lacking a stop codon.","definition_xrefs":["PMID:11910110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03805":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, non-stop decay","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"non-stop decay","type":"exact"},{"name":"non-stop mRNA decay","type":"exact"},{"name":"nonstop mRNA decay","type":"exact"},{"name":"nuclear-transcribed mRNA breakdown, non-stop decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolism, non-stop decay","type":"exact"},{"name":"nuclear-transcribed mRNA degradation, non-stop decay","type":"exact"}],"termid":"GO:0070481","terms_by_termid":{"GO:0070481":null}}


id: PBO:0041483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 96","termid":"PBO:0041483"}


id: PBO:0067501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 638, pseudogene","termid":"PBO:0067501"}


id: PBO:0025547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein Udp7","termid":"PBO:0025547"}


id: GO:0015413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ni2+(out) = ADP + phosphate + Ni2+(in).","definition_xrefs":["RHEA:15557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type nickel transporter activity","secondary_identifiers":["EC:7.2.2.11","MetaCyc:ABC-20-RXN","GO:0102016"],"synonyms":[{"name":"ATP-dependent nickel transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled nickel transmembrane transporter activity","type":"related"},{"name":"nickel ABC transporter","type":"exact"},{"name":"nickel ABC transporter activity","type":"exact"},{"name":"nickel porter activity","type":"related"},{"name":"nickel transporting ATPase activity","type":"related"},{"name":"nickel-transporting ATPase activity","type":"related"}],"termid":"GO:0015413"}


id: PBO:0079436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 4","termid":"PBO:0079436"}


id: PBO:0043216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 1","termid":"PBO:0043216"}


id: GO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adrenergic receptor signaling pathway","synonyms":[{"name":"adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenoceptor signaling pathway","type":"exact"}],"termid":"GO:0071875"}


id: PBO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_upstream_target","termid":"PBO:0006187"}


id: GO:0061811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD = cyclic ADP-ribose + nicotinamide.","definition_xrefs":["GOC:PARL","GOC:pad","GOC:dph","PMID:11866528"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-ribosyl cyclase activity (obsolete GO:0061811)","termid":"GO:0061811"}


id: PBO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase E3 Slx8 (predicted)","termid":"PBO:0003564"}


id: PBO:0050326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 28","termid":"PBO:0050326"}


id: PBO:0088617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex zf-C2H2 type zinc finger subunit Pir2","termid":"PBO:0088617"}


id: PBO:0051365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-31 (pseudogene)","termid":"PBO:0051365"}


id: GO:1904258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear dicing body.","definition_xrefs":["GOC:TermGenie","PMID:25902521","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nuclear dicing body assembly","synonyms":[{"name":"D body assembly","type":"exact"},{"name":"D body formation","type":"exact"},{"name":"nuclear dicing body formation","type":"exact"}],"termid":"GO:1904258"}


id: MONDO:0013689
data:
  {"annotated_genes":["SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87372],"is_not":false,"summary":null,"term":"MONDO:0013689"}]},"cv_name":"mondo","definition":"Any 46 XX gonadal dysgenesis in which the cause of the disease is a mutation in the PSMC3IP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:482101","UMLS:C3280471","DOID:0080495","GARD:18041","OMIM:614324"],"synonyms":[{"name":"46 XX gonadal dysgenesis caused by mutation in PSMC3IP","type":"exact"},{"name":"ODG3","type":"related"},{"name":"PSMC3IP 46 XX gonadal dysgenesis","type":"exact"},{"name":"ovarian dysgenesis 3","type":"exact"},{"name":"ovarian dysgenesis type 3","type":"exact"}],"termid":"MONDO:0013689","terms_by_termid":{"MONDO:0013689":null},"xrefs":{"Monarch":{"xref_id":"0013689"}}}


id: PBO:0005417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsk1-Dfp1 kinase complex regulatory subunit Dfp1","termid":"PBO:0005417"}


id: MONDO:0022448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyoplasia mandibulofacial dysostosis (obsolete MONDO:0022448)","termid":"MONDO:0022448","xrefs":{"Monarch":{"xref_id":"0022448"}}}


id: GO:0044422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete organelle part (obsolete GO:0044422)","termid":"GO:0044422"}


id: PBO:0083191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YML133C","termid":"PBO:0083191"}


id: PBO:0117434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF473 antisense RNA 1","termid":"PBO:0117434"}


id: GO:0016725
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_02948","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109073,94213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[70913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120547"},{"annotations":[73664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[73661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04397":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.17.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, other acceptors","type":"narrow"}],"termid":"GO:0016725","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null,"GO:0120547":null}}


id: GO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows leptotene during prophase I of meiosis, and during which each chromosome pairs with its homolog; the two become aligned and crossing over may occur.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"zygotene","secondary_identifiers":["Wikipedia:Meiosis#Zygotene","Wikipedia:Zygotene"],"termid":"GO:0000238"}


id: PR:O14107
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dni1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein dni1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.07","synonyms":[{"name":"Spom972h-dni1","type":"exact"},{"name":"delayed minus-nitrogen induction protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14107"}


id: MONDO:0013433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary sclerosing cholangitis (PSC) is a rare, slowly progressive liver disease characterized by inflammation and destruction of the intra- and/or extra-hepatic bile ducts that lead to cholestasis, liver fibrosis, liver cirrhosis and ultimately liver failure.","definition_xrefs":["Orphanet:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosing cholangitis","termid":"MONDO:0018646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"primary sclerosing cholangitis","secondary_identifiers":["MEDGEN:107565","DOID:0060643","GARD:1280","icd11.foundation:857962451","NANDO:2100265","NORD:1613","NANDO:1200440","ICD10CM:K83.01","MedDRA:10036732","OMIM:613806","SCTID:197441003","UMLS:C0566602"],"synonyms":[{"name":"PSC","type":"exact"},{"name":"cholangitis, primary sclerosing","type":"related"}],"termid":"MONDO:0013433","xrefs":{"Monarch":{"xref_id":"0013433"}}}


id: PBO:0047202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member B","termid":"PBO:0047202"}


id: PBO:0085976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; proposed involvement in transport based on mass spectrometry analysis of copurifying proteins; null mutant is viable","termid":"PBO:0085976"}


id: GO:0030916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the transition of the otic placode into the otic vesicle, a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle formation","synonyms":[{"name":"otocyst biosynthesis","type":"exact"},{"name":"otocyst formation","type":"exact"}],"termid":"GO:0030916"}


id: RO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_organization_of","termid":"RO:0002592"}


id: PBO:0085125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; required for 35S pre-RNA processing and 40S ribosomal subunit biogenesis","termid":"PBO:0085125"}


id: PBO:0036036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_mitotic_chromosome_segregation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0036036"}


id: GO:0047284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl D-xylosyl phosphate + protein = dolichol-phosphate + D-xylosylprotein.","definition_xrefs":["EC:2.4.2.33","MetaCyc:2.4.2.33-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dolichyl-xylosyl-phosphate-protein xylosyltransferase activity","secondary_identifiers":["RHEA:18361"],"synonyms":[{"name":"dolichyl-D-xylosyl-phosphate:protein D-xylosyltransferase activity","type":"related"}],"termid":"GO:0047284"}


id: PBO:0110339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBLN pseudogene 2","termid":"PBO:0110339"}


id: MONDO:0014435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS7-related ciliopathy","termid":"MONDO:1040042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 7","secondary_identifiers":["DOID:0110129","GARD:10206","OMIM:615984","UMLS:C1859565","MEDGEN:347180","MESH:C565916"],"synonyms":[{"name":"BBS7","type":"exact"},{"name":"BBS7 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 7","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS7","type":"exact"},{"name":"Bardet-Biedl syndrome type 7","type":"exact"}],"termid":"MONDO:0014435","xrefs":{"Monarch":{"xref_id":"0014435"}}}


id: MONDO:0004018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A carcinoma that involves the liver.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete liver carcinoma (obsolete MONDO:0004018)","termid":"MONDO:0004018","xrefs":{"Monarch":{"xref_id":"0004018"}}}


id: PBO:0057188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 346","termid":"PBO:0057188"}


id: GO:1905713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mitochondrial calcium uptake that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:26644474"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial calcium uptake involved in regulation of presynaptic cytosolic calcium ion concentration (obsolete GO:1905713)","synonyms":[{"name":"calcium ion transmembrane import into mitochondrion involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ion transmembrane import into mitochondrion involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"mitochondrial calcium uptake involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905713"}


id: GO:0031523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex consisting of Myb and other proteins that regulates site specific DNA replication, gene amplification and transcriptional repression.","definition_xrefs":["PMID:12490953","PMID:15545624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Myb complex","synonyms":[{"name":"Myeloblastosis proto-oncogene protein complex","type":"exact"}],"termid":"GO:0031523"}


id: PBO:0045123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D binding myb like transcription factor 1","termid":"PBO:0045123"}


id: GO:0018916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrobenzene (nitrobenzol), a derivative of benzene with an NO2 group attached to the ring. It is a yellow aromatic liquid used in perfumery and manufactured in large quantities in the preparation of aniline.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:nb"],"synonyms":[{"name":"nitrobenzene metabolism","type":"exact"}],"termid":"GO:0018916"}


id: MOD:01212
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-(carboxamidomethyl)lysine.","definition_xrefs":["Unimod:4#K","OMSSA:27","PubMed:12422359","PubMed:11510821","PubMed:12686488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide N6-derivatized lysine","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"N6-(2-amino-2-oxoethyl)lysine","type":"exact"},{"name":"N6-(carbamoylmethyl)lysine","type":"exact"},{"name":"carbamidomethylk","type":"exact"}],"termid":"MOD:01212"}


id: PBO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase Ups1","termid":"PBO:0001830"}


id: PBO:0013121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein Dbl2","termid":"PBO:0013121"}


id: PBO:0091688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Itsy-Bitsy Phosphatase","termid":"PBO:0091688"}


id: PBO:0047844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FPGT-TNNI3K readthrough","termid":"PBO:0047844"}


id: GO:0044144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth of symbiont involved in interaction with host (obsolete GO:0044144)","synonyms":[{"name":"modulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044144"}


id: MONDO:0006530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathologic process characterized by the proliferation of keratinizing squamous epithelium resulting in the accumulation of keratin and cells in the middle ear and/or mastoid. It may be congenital or acquired. If left untreated, it may increase in size and destroy adjacent structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholesteatoma","secondary_identifiers":["DOID:869","MESH:D002781","ICD9:385.30","SCTID:363668000","UMLS:C0008373","MEDGEN:3043","EFO:1000675","HP:0009797","NCIT:C2944"],"synonyms":[{"name":"cholesteatoma","type":"exact"},{"name":"cholesteatoma (disease)","type":"exact"},{"name":"congenital cholesteatoma (type)","type":"related"},{"name":"primary acquired cholesteatoma (type)","type":"related"},{"name":"secondary acquired cholesteatoma (type)","type":"related"}],"termid":"MONDO:0006530","xrefs":{"Monarch":{"xref_id":"0006530"}}}


id: GO:1901978
data:
  {"annotated_genes":["SJAG_04259","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:23028116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001052"],"synonyms":[{"name":"activation of cell cycle checkpoint","type":"narrow"},{"name":"positive regulation of G1/S checkpoint","type":"related"},{"name":"positive regulation of G1/S transition checkpoint","type":"related"},{"name":"up regulation of cell cycle checkpoint","type":"exact"},{"name":"up-regulation of cell cycle checkpoint","type":"exact"},{"name":"upregulation of cell cycle checkpoint","type":"exact"}],"termid":"GO:1901978","terms_by_termid":{"GO:0090267":null,"GO:1905326":null}}


id: PBO:0036019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_acetylation_during_vegetative_growth","termid":"PBO:0036019"}


id: PBO:0086348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTEN homolog with no demonstrated inositol lipid phosphatase activity; plays a role in normal sporulation; homolog of human tumor suppressor gene PTEN/MMAC1/TEP1 and fission yeast ptn1","termid":"PBO:0086348"}


id: GO:0044111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.","definition_xrefs":["GO:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interspecies interaction between organisms","termid":"GO:0044419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of structure involved in a symbiotic process","secondary_identifiers":["GO:0044152","GO:0044115"],"synonyms":[{"name":"development during symbiotic interaction","type":"related"},{"name":"development involved in symbiotic interaction","type":"related"},{"name":"development of symbiont during interaction with host","type":"related"},{"name":"development of symbiont involved in interaction with host","type":"related"},{"name":"development on or near surface of other organism during symbiotic interaction","type":"related"},{"name":"development on or near surface of other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0044111"}


id: PBO:0076241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2 pseudogene 2","termid":"PBO:0076241"}


id: FYPO:0006317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000631","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis II","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0006317"}


id: PBO:0029590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_binding_phenotype","termid":"PBO:0029590"}


id: PBO:0073963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 12","termid":"PBO:0073963"}


id: MONDO:0003264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma which displays squamous differentiation. The neoplastic cells have more abundant cytoplasm with more marked keratinization than typical basal cell carcinomas. It usually has a more aggressive clinical course compared to typical basal cell carcinoma, and it may produce regional or widespread metastases.","definition_xrefs":["NCIT:C2922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"basosquamous carcinoma","secondary_identifiers":["MESH:D002281","MEDGEN:2841","EFO:1000529","MONDO:0006413","ICDO:8094/3","DOID:5063","SCTID:254702000","UMLS:C0007118"],"synonyms":[{"name":"Basisquamous cell carcinoma","type":"exact"},{"name":"basosquamous carcinoma","type":"exact"},{"name":"basosquamous cell carcinoma","type":"exact"},{"name":"basosquamous tumor, malignant","type":"exact"},{"name":"metatypical carcinoma","type":"exact"},{"name":"metatypical carcinoma (morphologic abnormality)","type":"exact"},{"name":"skin basosquamous cell carcinoma","type":"exact"},{"name":"skin mixed basal and squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003264","xrefs":{"Monarch":{"xref_id":"0003264"}}}


id: PBO:0090539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase Rhp16b","termid":"PBO:0090539"}


id: PBO:0003276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.9","termid":"PBO:0003276"}


id: PBO:0048413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA2 antisense RNA 1","termid":"PBO:0048413"}


id: GO:1900762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of averantin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"averantin metabolic process","termid":"GO:1900761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"averantin catabolic process","synonyms":[{"name":"averantin breakdown","type":"exact"},{"name":"averantin catabolism","type":"exact"},{"name":"averantin degradation","type":"exact"}],"termid":"GO:1900762"}


id: GO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins following the induction of and contributing to an immune response.","definition_xrefs":["PMID:14991701","GOC:add","ISBN:0781735149","PMID:11205333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic hypermutation of immunoglobulin genes","termid":"GO:0016446"},{"relation_name":"part_of","term_name":"B cell affinity maturation","termid":"GO:0002344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"somatic hypermutation of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic hypermutation of antibody genes during immune response","type":"related"},{"name":"somatic hypermutation of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002205"}


id: GO:0036185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 15-oxo-(5S,6R)-dihydroxy-(7E,9E,11Z,13E)-eicosatetraenoate + NADH + H+ = 15-oxo-(5S,6R)-dihydroxy-(7E,9E,11Z)-eicosatrienoate + NAD+.","definition_xrefs":["PMID:10837478","RHEA:41592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"13-lipoxin reductase activity","secondary_identifiers":["Reactome:R-HSA-2161844"],"termid":"GO:0036185"}


id: PBO:0071780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 8","termid":"PBO:0071780"}


id: GO:0050362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + 2-oxoglutarate = indolepyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.27","MetaCyc:TRYPTOPHAN-AMINOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan aminotransferase activity","termid":"GO:0070529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"L-tryptophan:2-oxoglutarate aminotransferase activity","secondary_identifiers":["RHEA:14093"],"synonyms":[{"name":"5-hydroxytryptophan-ketoglutaric transaminase activity","type":"related"},{"name":"L-phenylalanine-2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-tryptophan aminotransferase activity","type":"broad"},{"name":"L-tryptophan transaminase activity","type":"broad"},{"name":"hydroxytryptophan aminotransferase activity","type":"related"},{"name":"tryptophan aminotransferase activity","type":"exact"},{"name":"tryptophan transaminase activity","type":"broad"}],"termid":"GO:0050362"}


id: PBO:0081144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP62 zinc finger protein","termid":"PBO:0081144"}


id: PBO:0079736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 2A","termid":"PBO:0079736"}


id: PBO:0072993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein like 2","termid":"PBO:0072993"}


id: GO:0090219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of lipid kinase activity (obsolete GO:0090219)","termid":"GO:0090219"}


id: PATO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having a spindle-like shape that is wide in the middle and tapers at both ends.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle-shaped","termid":"PATO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusiform","termid":"PATO:0002400"}


id: MONDO:0004221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with perivascular epithelioid cell differentiation arising from the uterine corpus wall.","definition_xrefs":["NCIT:C40180"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"mixed endometrial stromal and smooth muscle tumor","termid":"MONDO:0004526"},{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus perivascular epithelioid cell tumor","secondary_identifiers":["ONCOTREE:UPECOMA","MEDGEN:276940","UMLS:C1519862","DOID:7437"],"synonyms":[{"name":"body of uterus neoplasm with perivascular epithelioid cell differentiation","type":"exact"},{"name":"uterine corpus PEComa","type":"exact"},{"name":"uterine corpus perivascular epithelioid cell tumor","type":"exact"},{"name":"uterine perivascular epithelioid cell tumor","type":"related"},{"name":"uterine perivascular epithelioid cell tumour","type":"related"},{"name":"uterus perivascular epithelioid cell tumor","type":"related"},{"name":"uterus perivascular epithelioid cell tumour","type":"related"}],"termid":"MONDO:0004221","xrefs":{"Monarch":{"xref_id":"0004221"}}}


id: PBO:0070342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 15","termid":"PBO:0070342"}


id: FYPO:0007482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:27889481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis I","type":"exact"}],"termid":"FYPO:0007482"}


id: PBO:0075347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOS Ras/Rho guanine nucleotide exchange factor 2","termid":"PBO:0075347"}


id: GO:1902397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in meiotic spindle checkpoint.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in meiotic spindle checkpoint (obsolete GO:1902397)","synonyms":[{"name":"perception of stimulus involved in meiotic spindle checkpoint","type":"related"},{"name":"stimulus detection involved in meiotic spindle checkpoint","type":"exact"},{"name":"stimulus sensing involved in meiotic spindle checkpoint","type":"related"}],"termid":"GO:1902397"}


id: FYPO:0008153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the silent mating-type cassette is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to heterochromatin at  silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished protein localization to mating-type locus heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0008153"}


id: PBO:0114065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C14orf119 pseudogene 1","termid":"PBO:0114065"}


id: GO:1904513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of initiation of premeiotic DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25891897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of nuclear cell cycle DNA replication","termid":"GO:1902576"},{"relation_name":"is_a","term_name":"regulation of initiation of premeiotic DNA replication","termid":"GO:1904512"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA replication initiation","termid":"GO:1902974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"negative regulation of initiation of premeiotic DNA replication","synonyms":[{"name":"down regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"down regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"down regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"down regulation of meiotic DNA replication initiation","type":"related"},{"name":"down regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"down-regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"down-regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"down-regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"down-regulation of meiotic DNA replication initiation","type":"related"},{"name":"down-regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"downregulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"downregulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"downregulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"downregulation of meiotic DNA replication initiation","type":"related"},{"name":"downregulation of premeiotic DNA replication initiation","type":"exact"},{"name":"inhibition of initiation of meiotic DNA synthesis","type":"related"},{"name":"inhibition of initiation of premeiotic DNA replication","type":"narrow"},{"name":"inhibition of initiation of premeiotic DNA synthesis","type":"related"},{"name":"inhibition of meiotic DNA replication initiation","type":"related"},{"name":"inhibition of premeiotic DNA replication initiation","type":"narrow"},{"name":"negative regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"negative regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"negative regulation of meiotic DNA replication initiation","type":"related"},{"name":"negative regulation of premeiotic DNA replication initiation","type":"exact"}],"termid":"GO:1904513"}


id: MONDO:1012539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypomyelinating leukodystrophy, non-human animal","termid":"MONDO:1011898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypomyelinating leukodystrophy, dog","secondary_identifiers":["OMIA:002321-9615"],"termid":"MONDO:1012539","xrefs":{"Monarch":{"xref_id":"1012539"}}}


id: PBO:0051233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-31-1 (pseudogene)","termid":"PBO:0051233"}


id: PBO:0051864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly enzyme pseudogene 1","termid":"PBO:0051864"}


id: PBO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV radiation resistance associated","termid":"PBO:0080114"}


id: PBO:0075687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Snf2 related CREBBP activator protein","termid":"PBO:0075687"}


id: PBO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase O (putative)","termid":"PBO:0039637"}


id: GO:0102829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 verbascose = ajugose + stachyose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ajugose synthase activity (obsolete GO:0102829)","termid":"GO:0102829"}


id: MONDO:0015110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of cardiac rhythm disease that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic cardiac rhythm disease (obsolete MONDO:0015110)","secondary_identifiers":["Orphanet:101934"],"synonyms":[{"name":"genetic cardiac rhythm disease","type":"exact"}],"termid":"MONDO:0015110","xrefs":{"Monarch":{"xref_id":"0015110"}}}


id: FYPO:0007990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize isoleucine, and therefore requires isoleucine in the medium for vegetative cell growth.","definition_xrefs":["PMID:35325114","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for isoleucine","synonyms":[{"name":"growth auxotrophic for isoleucine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for isoleucine during vegetative growth","type":"exact"},{"name":"isoleucine auxotrophy","type":"exact"}],"termid":"FYPO:0007990"}


id: GO:0002119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:ems","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode larval development","termid":"GO:0002119"}


id: PBO:0084195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H3 acetylase with a role in transcriptional regulation; sequence-specific activator of histone genes, binds specifically and cooperatively to pairs of UAS elements in core histone promoters, functions at or near TATA box; involved in S phase-specific acetylation of H3K56 at histone promoters, which is required for recruitment of SWI/SNF nucleosome remodeling complex and subsequent transcription","termid":"PBO:0084195"}


id: PBO:0074797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-2","termid":"PBO:0074797"}


id: PBO:0113129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic translation elongation factor 2 (eEF2, EF-2); also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT2 has a paralog, EFT1, that arose from the whole genome duplication","termid":"PBO:0113129"}


id: PBO:0056907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoguardin 2","termid":"PBO:0056907"}


id: GO:0160179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which iron is taken up from the contents of the intestine.","definition_xrefs":["PMID:16054062","PMID:17729393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal iron absorption","termid":"GO:0160179"}


id: MONDO:0019708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","synonyms":[{"name":"primary osteodysplasia with disorganized development of skeletal components","type":"related"},{"name":"primary skeletal dysplasia with disorganized development of skeletal components","type":"related"}],"termid":"MONDO:0019708","xrefs":{"Monarch":{"xref_id":"0019708"}}}


id: PBO:0067574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 731, pseudogene","termid":"PBO:0067574"}


id: PBO:0038544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 16A, phospholipase","termid":"PBO:0038544"}


id: PBO:0076970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 1","termid":"PBO:0076970"}


id: MONDO:0013032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any generalized epilepsy in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 8","secondary_identifiers":["DOID:0111322","MEDGEN:414549","OMIM:612899","UMLS:C2752062"],"synonyms":[{"name":"CASR generalised epilepsy","type":"exact"},{"name":"CASR generalized epilepsy","type":"exact"},{"name":"EIG8","type":"related"},{"name":"epilepsy idiopathic generalized, susceptibility to, 8","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 8","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 8","type":"exact"},{"name":"generalised epilepsy caused by mutation in CASR","type":"exact"},{"name":"generalized epilepsy caused by mutation in CASR","type":"exact"},{"name":"susceptibility to idiopathic generalised epilepsy 8","type":"related"},{"name":"susceptibility to idiopathic generalized epilepsy 8","type":"related"}],"termid":"MONDO:0013032","xrefs":{"Monarch":{"xref_id":"0013032"}}}


id: PBO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation is independent of association with Pcu4-DDb1-CSN complex","termid":"PBO:0001303"}


id: MONDO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leather-bottle stomach (obsolete MONDO:0002839)","termid":"MONDO:0002839","xrefs":{"Monarch":{"xref_id":"0002839"}}}


id: MONDO:0011007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of classical diaphragmatic hernia (Bochdalek type) with severe lung hypoplasia, and variable associated malformations. It has been reported only once in four successive fetuses (two females and two males) born to a nonconsanguineous couple. The spectrum of malformations is wide and includes, besides diaphragmatic hernia and hypoplastic lungs (present in the four fetuses), omphalocele (one case), severe limb hypoplasia (two cases), syndactyly of the toes (two cases), extra spleen (one case), and an ossification defect of the skull (one case). Inheritance seems either to be autosomal recessive or due to a gonadal mosaicism in one parent. Prenatal diagnosis of diaphragmatic hernia and severe lung hypoplasia detected on ultrasonography made the parents opt for termination of the four pregnancies.","definition_xrefs":["GARD:0002397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphragmatic defect-limb deficiency-skull defect syndrome","secondary_identifiers":["SCTID:721095007","UMLS:C1832668","Orphanet:2141","OMIM:601163","MEDGEN:371377","GARD:2397","MESH:C563380"],"synonyms":[{"name":"diaphragmatic defect limb deficiency skull defect","type":"related"},{"name":"diaphragmatic defects, limb deficiencies, and ossification defects of skull","type":"related"},{"name":"froster syndrome","type":"related"},{"name":"froster-Huch syndrome","type":"exact"}],"termid":"MONDO:0011007","xrefs":{"Monarch":{"xref_id":"0011007"}}}


id: GO:0110089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["PMID:18940801","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"}


id: PBO:0068907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 150, pseudogene","termid":"PBO:0068907"}


id: SO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant whereby the effect is evaluated with respect to a reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_variant","termid":"SO:0001060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_effect_variant","synonyms":[{"name":"functional effect variant","type":"exact"},{"name":"functional variant","type":"exact"}],"termid":"SO:0001536"}


id: GO:0110028
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle organization.","definition_xrefs":["GOC:bhm","PMID:17576815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"positive regulation of mitotic spindle organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110028","terms_by_termid":{"GO:0110161":null}}


id: GO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"negatively_regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell tolerance induction","synonyms":[{"name":"down regulation of B cell tolerance induction","type":"exact"},{"name":"down-regulation of B cell tolerance induction","type":"exact"},{"name":"downregulation of B cell tolerance induction","type":"exact"},{"name":"inhibition of B cell tolerance induction","type":"narrow"},{"name":"negative regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"negative regulation of B-cell tolerance induction","type":"exact"},{"name":"negative regulation of B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002662"}


id: GO:0042858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine).","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"chrysobactin metabolic process","termid":"GO:0042857"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"chrysobactin biosynthetic process","secondary_identifiers":["GO:0031184","GO:0031183"],"synonyms":[{"name":"chrysobactin anabolism","type":"exact"},{"name":"chrysobactin biosynthesis","type":"exact"},{"name":"chrysobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"chrysobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"chrysobactin formation","type":"exact"},{"name":"chrysobactin synthesis","type":"exact"}],"termid":"GO:0042858"}


id: PBO:0068035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 340","termid":"PBO:0068035"}


id: GO:0160139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2605) in 23S rRNA = pseudouridine(2605) in 23S rRNA.","definition_xrefs":["RHEA:42520","EC:5.4.99.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2605) synthase activity","termid":"GO:0160139"}


id: PBO:0066488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A","termid":"PBO:0066488"}


id: MONDO:0008949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral malformation, seizures, hypertrichosis, and overlapping fingers","secondary_identifiers":["MEDGEN:395211","OMIM:213820","MESH:C537370","UMLS:C1859259"],"synonyms":[{"name":"Muller Barth Menger syndrome","type":"related"},{"name":"cerebral malformation, seizures, hypertrichosis, and overlapping fingers","type":"exact"}],"termid":"MONDO:0008949","xrefs":{"Monarch":{"xref_id":"0008949"}}}


id: MONDO:0005836
data:
  {"annotated_genes":["SJAG_04885","SJAG_04884","SJAG_04287","SJAG_00997","SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88378,88377,88376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700275"},{"annotations":[89082,89083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the male reproductive system. Representative examples include prostate carcinoma, penile carcinoma, testicular seminoma, and testicular embryonal carcinoma.","definition_xrefs":["NCIT:C8561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_03131":null,"SJAG_04287":null,"SJAG_04884":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"male reproductive organ cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:102279","SCTID:363515000","ICD9:187.8","DOID:3856","MESH:D005834","ICD9:187.9","UMLS:C0153606","EFO:0007355"],"synonyms":[{"name":"cancer of male reproductive organ","type":"exact"},{"name":"male genital cancer","type":"exact"},{"name":"male genital neoplasm","type":"broad"},{"name":"male reproductive organ cancer","type":"exact"},{"name":"male reproductive system neoplasm","type":"broad"},{"name":"malignant Male reproductive system neoplasm","type":"exact"},{"name":"malignant Male reproductive system tumor","type":"exact"},{"name":"malignant Male reproductive system tumour","type":"exact"},{"name":"malignant male reproductive organ neoplasm","type":"exact"},{"name":"malignant neoplasm of Male reproductive system","type":"exact"},{"name":"malignant neoplasm of male genital organ","type":"exact"},{"name":"malignant neoplasm of male genital organ or tract","type":"exact"},{"name":"malignant neoplasm of male genital organ, site unspecified","type":"exact"},{"name":"malignant neoplasm of male genital organs","type":"exact"},{"name":"malignant neoplasm of male reproductive organ","type":"exact"},{"name":"malignant neoplasm of the Male reproductive system","type":"exact"},{"name":"malignant tumor of Male reproductive system","type":"exact"},{"name":"malignant tumor of male genital organ","type":"exact"},{"name":"malignant tumor of male reproductive system","type":"exact"},{"name":"malignant tumor of the Male reproductive system","type":"exact"},{"name":"malignant tumour of Male reproductive system","type":"exact"},{"name":"malignant tumour of male genital organ","type":"exact"},{"name":"malignant tumour of male reproductive system","type":"exact"},{"name":"malignant tumour of the Male reproductive system","type":"exact"},{"name":"neoplasm of male genital organ","type":"broad"},{"name":"tumor of male reproductive system","type":"broad"},{"name":"tumour of male reproductive system","type":"broad"}],"termid":"MONDO:0005836","terms_by_termid":{"MONDO:0013872":null,"MONDO:0700275":null},"xrefs":{"Monarch":{"xref_id":"0005836"}}}


id: PBO:0076332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 1","termid":"PBO:0076332"}


id: PR:Q9USZ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transportin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11G11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.07","secondary_identifiers":["UniProtKB:Q9USZ2"],"synonyms":[{"name":"Spom972h-TNPO3","type":"exact"}],"termid":"PR:Q9USZ2"}


id: PATO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of not being harmed or injured or spoiled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damage","termid":"PATO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undamaged","termid":"PATO:0001168"}


id: PBO:0078418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-4","termid":"PBO:0078418"}


id: MONDO:0007489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysplasia epiphysealis hemimelica (DEH), or Trevor's disease, is a rare condition that most commonly affects the epiphysis (the end) of long bones in children. Early diagnosis and treatment are necessary to prevent joint dysfunction and deformity and may be surgical or non-surgical depending on the location and the symptoms. Due to the progressive nature of this disorder and the chance of worsening deformity, patients should be followed until skeletal maturity. The cause of dysplasia epiphysealis hemimelica is not known.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplasia epiphysealis hemimelica","secondary_identifiers":["NORD:1072","SCTID:205480005","ICD9:756.59","GARD:2019","MEDGEN:96591","MESH:C537997","UMLS:C0432282","icd11.foundation:1995096940","OMIM:127800","Orphanet:1822"],"synonyms":[{"name":"Trevor disease","type":"exact"},{"name":"dysplasia epiphysealis hemimelica","type":"exact"}],"termid":"MONDO:0007489","xrefs":{"Monarch":{"xref_id":"0007489"}}}


id: PBO:0043291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 10A","termid":"PBO:0043291"}


id: PBO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap104","termid":"PBO:0002294"}


id: PATO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's exhibiting a layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stratification","termid":"PATO:0002067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratified","termid":"PATO:0002068"}


id: MONDO:1010017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, non-human animal","secondary_identifiers":["OMIA:000779"],"termid":"MONDO:1010017","xrefs":{"Monarch":{"xref_id":"1010017"}}}


id: PBO:0061388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 48","termid":"PBO:0061388"}


id: SO:0001337
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Methylwyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylwyosine","secondary_identifiers":["RNAMOD:042"],"synonyms":[{"name":"mimG","type":"exact"}],"termid":"SO:0001337"}


id: PBO:0075397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP100 nuclear antigen","termid":"PBO:0075397"}


id: PBO:0024851
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae STE6","termid":"PBO:0024851"}


id: PBO:0076684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 3","termid":"PBO:0076684"}


id: PBO:0065835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family","termid":"PBO:0065835"}


id: PBO:0078854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 2","termid":"PBO:0078854"}


id: PBO:0070351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 24","termid":"PBO:0070351"}


id: PBO:0005777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp18 (predicted)","termid":"PBO:0005777"}


id: MONDO:1010011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated cardiomyopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, non-human animal","secondary_identifiers":["OMIA:000162"],"termid":"MONDO:1010011","xrefs":{"Monarch":{"xref_id":"1010011"}}}


id: PBO:0088766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Rpp40","termid":"PBO:0088766"}


id: PBO:0057982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3909","termid":"PBO:0057982"}


id: GO:0055050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form the astral spindle in male meiotic cells.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete astral spindle assembly involved in male meiosis (obsolete GO:0055050)","termid":"GO:0055050"}


id: GO:0061507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2',3' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 2',5' and 3',5' linkages.","definition_xrefs":["GOC:dph","PMID:23910378","PMID:23258412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cyclic GMP-AMP binding","termid":"GO:0140702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"2',3'-cyclic GMP-AMP binding","secondary_identifiers":["GO:0098546"],"synonyms":[{"name":"2',3' cGAMP binding","type":"exact"},{"name":"2',3' cyclic GAMP binding","type":"exact"},{"name":"2',3'-cGAMP binding","type":"exact"},{"name":"2',3'-cyclic GAMP binding","type":"exact"},{"name":"2',5-3',5'-cyclic GMP-AMP binding","type":"exact"},{"name":"c[G(2',5')pA(3',5')p] binding","type":"exact"},{"name":"cyclic-GMP-AMP binding","type":"broad"}],"termid":"GO:0061507"}


id: PBO:0046574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 16","termid":"PBO:0046574"}


id: GO:0044381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the hexose monosaccharide glucose into a cell as a result of an insulin stimulus.","definition_xrefs":["PMID:19079291","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose import","termid":"GO:0046323"},{"relation_name":"part_of","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"glucose import in response to insulin stimulus","synonyms":[{"name":"cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:0044381"}


id: PBO:0089846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor IF-2Mt/Mti2","termid":"PBO:0089846"}


id: GO:0002426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis and release of immunoglobulin in the mucosal tissue.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin production involved in immunoglobulin-mediated immune response","termid":"GO:0002381"},{"relation_name":"part_of","term_name":"mucosal immune response","termid":"GO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"immunoglobulin production in mucosal tissue","synonyms":[{"name":"antibody production in mucosal tissue","type":"exact"}],"termid":"GO:0002426"}


id: GO:0018699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1,1-trichloroethane + 2 H+ + 2 e- = 1,1-dichloroethane + HCl.","definition_xrefs":["UM-BBD_reactionID:r1007"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1,1-trichloroethane reductive dehalogenase activity (obsolete GO:0018699)","termid":"GO:0018699"}


id: PBO:0003667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit, histone demethylase H3-K36 specific Jmj3","termid":"PBO:0003667"}


id: PBO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_C-shaped_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034646"}


id: GO:0050338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 thiosulfate + 2 ferricytochrome c = tetrathionate + 2 ferrocytochrome c.","definition_xrefs":["EC:1.8.2.2","MetaCyc:THIOSULFATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","termid":"GO:0016669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thiosulfate dehydrogenase activity","secondary_identifiers":["RHEA:20549"],"synonyms":[{"name":"tetrathionate synthase activity","type":"related"},{"name":"thiosulfate oxidase activity","type":"related"},{"name":"thiosulfate-acceptor oxidoreductase activity","type":"related"},{"name":"thiosulfate-oxidizing enzyme","type":"related"},{"name":"thiosulfate:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"thiosulphate dehydrogenase activity","type":"exact"}],"termid":"GO:0050338"}


id: MONDO:0011955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus","termid":"MONDO:0005148"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0005015"],"is_obsolete":false,"name":"diabetes mellitus, noninsulin-dependent, 4","secondary_identifiers":["OMIM:608036","MEDGEN:334578","MESH:C564299","UMLS:C1842642"],"synonyms":[{"name":"Niddm4","type":"related"},{"name":"diabetes mellitus, noninsulin-dependent, 4","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, type 4","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus 4","type":"related"}],"termid":"MONDO:0011955","xrefs":{"Monarch":{"xref_id":"0011955"}}}


id: GO:0010202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Low fluence red light is defined in this case as short pulses of red light followed by darkness, providing a light level of 0.001-0.1 mmol/m2/sec.","definition_xrefs":["GOC:sm","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to low light intensity stimulus","termid":"GO:0009645"},{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low fluence red light stimulus","termid":"GO:0010202"}


id: PBO:0081468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 341","termid":"PBO:0081468"}


id: MOD:00563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminogalactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated","termid":"MOD:00734"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminogalactosylated residue","synonyms":[{"name":"GalNAcRes","type":"exact"},{"name":"HexNAc","type":"related"}],"termid":"MOD:00563"}


id: MONDO:0019138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bleeding diathesis due to a collagen receptor defect (obsolete MONDO:0019138)","secondary_identifiers":["Orphanet:73271"],"termid":"MONDO:0019138","xrefs":{"Monarch":{"xref_id":"0019138"}}}


id: PBO:0043846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 1","termid":"PBO:0043846"}


id: PBO:0049478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.2 linker histone, cluster member","termid":"PBO:0049478"}


id: PBO:0120223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome assembly protein Rsa3","termid":"PBO:0120223"}


id: MONDO:0018474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"13q12.3 microdeletion syndrome is a rare chromosomal anomaly characterized by moderate intellectual disability, speech delay, postnatal microcephaly, eczema or atopic dermatitis, characteristic facial features (malar flattening, prominent nose, underdeveloped alae nasi, smooth philtrum, and thin vermillion of the upper lip), and reduced sensitivity to pain.","definition_xrefs":["Orphanet:412035"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 13","termid":"MONDO:0016911"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"13q12.3 microdeletion syndrome","secondary_identifiers":["UMLS:C4750951","MEDGEN:1657124","GARD:21737"],"synonyms":[{"name":"Del(13)(q12.3)","type":"exact"},{"name":"monosomy 13q12.3","type":"exact"}],"termid":"MONDO:0018474","xrefs":{"Monarch":{"xref_id":"0018474"}}}


id: MONDO:1010328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoschisis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoschisis, non-human animal","secondary_identifiers":["OMIA:001185"],"termid":"MONDO:1010328","xrefs":{"Monarch":{"xref_id":"1010328"}}}


id: GO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + oxaloacetate = L-aspartate + glyoxylate.","definition_xrefs":["RHEA:17141","EC:2.6.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"glycine-oxaloacetate transaminase activity","secondary_identifiers":["KEGG_REACTION:R00373","MetaCyc:2.6.1.35-RXN"],"synonyms":[{"name":"glycine--oxaloacetate aminotransferase activity","type":"related"},{"name":"glycine-oxalacetate aminotransferase activity","type":"related"},{"name":"glycine-oxaloacetate aminotransferase activity","type":"exact"},{"name":"glycine:oxaloacetate aminotransferase activity","type":"related"}],"termid":"GO:0047303"}


id: PBO:0052231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 8","termid":"PBO:0052231"}


id: MONDO:0030768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 5A, intermediate","secondary_identifiers":["UMLS:C5676956","OMIM:619816","MEDGEN:1811851"],"synonyms":[{"name":"JEB5A","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, generalised intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, generalized intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, intermediate","type":"exact"},{"name":"epidermolysis bullosa, junctional 5A, non-herlitz IIA","type":"exact"}],"termid":"MONDO:0030768","xrefs":{"Monarch":{"xref_id":"0030768"}}}


id: PBO:0088273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase/ ubiquitin-protein ligase E3 Irc20","termid":"PBO:0088273"}


id: PATO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000286 cytoplasmic male sterility (obsolete PATO:0000286)","termid":"PATO:0000286"}


id: PBO:0046045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C like","termid":"PBO:0046045"}


id: PBO:0075246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 16","termid":"PBO:0075246"}


id: MONDO:0017903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of mendelian susceptibility to mycobacterial diseases characterized by a partial deficiency in IFN-gammaR2, leading to impaired response to IFN-gamma and, consequently, to recurrent, moderately severe infections with bacillus Calmette-Guerin (BCG) and other environmental mycobacteria (EM).","definition_xrefs":["Orphanet:319589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to partial IFNgammaR2 deficiency","secondary_identifiers":["UMLS:C4510875","MEDGEN:1371829"],"synonyms":[{"name":"IFNGR2 autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"autosomal dominant MSMD due to partial IFNgammaR2 deficiency","type":"exact"},{"name":"autosomal dominant MSMD due to partial interferon gamma receptor 2 deficiency","type":"exact"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IFNGR2","type":"exact"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to partial interferon gamma receptor 2 deficiency","type":"exact"}],"termid":"MONDO:0017903","xrefs":{"Monarch":{"xref_id":"0017903"}}}


id: PBO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 4","termid":"PBO:0045065"}


id: PBO:0117416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 11B (putative)","termid":"PBO:0117416"}


id: PBO:0050408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 10","termid":"PBO:0050408"}


id: PBO:0076625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBCEL-TECTA readthrough","termid":"PBO:0076625"}


id: GO:0098974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the postsynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"postsynaptic actin cytoskeleton organization","termid":"GO:0098974"}


id: FYPO:0007615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal during a cellular response to nitric oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during cellular response to nitric oxide","termid":"FYPO:0002781"},{"relation_name":"is_a","term_name":"increased transcription from STREP promoter","termid":"FYPO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription from STREP promoter during cellular response to nitric oxide","synonyms":[{"name":"increased transcription from STREP promoter during cellular response to NO","type":"exact"},{"name":"increased transcription from STREP promoter during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"increased transcription from STREP promoter during cellular response to nitric oxide during vegetative growth","type":"exact"}],"termid":"FYPO:0007615"}


id: PBO:0034163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-releases_neurotransmitter","termid":"PBO:0034163"}


id: SO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"reverse","termid":"SO:0001031"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reverse_primer","synonyms":[{"name":"DNA reverse primer","type":"exact"},{"name":"reverse DNA primer","type":"exact"},{"name":"reverse primer","type":"exact"},{"name":"reverse primer oligo","type":"exact"},{"name":"reverse primer oligonucleotide","type":"exact"},{"name":"reverse primer sequence","type":"exact"}],"termid":"SO:0000132"}


id: GO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a cilium.","definition_xrefs":["GOC:dph","GOC:rph","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ciliary membrane","secondary_identifiers":["GO:0020017"],"synonyms":[{"name":"cilial membrane","type":"exact"},{"name":"cilium membrane","type":"exact"},{"name":"flagellar membrane","type":"narrow"},{"name":"flagellum membrane","type":"narrow"}],"termid":"GO:0060170"}


id: PBO:0077304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 43","termid":"PBO:0077304"}


id: MONDO:0020619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, langereis system (obsolete MONDO:0020619)","secondary_identifiers":["OMIM:111600"],"synonyms":[{"name":"BLOOD GROUP, LANGEREIS SYSTEM","type":"related"},{"name":"LAN","type":"related"},{"name":"blood group, Langereis system","type":"exact"}],"termid":"MONDO:0020619","xrefs":{"Monarch":{"xref_id":"0020619"}}}


id: PBO:0056149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mab-21 like 4","termid":"PBO:0056149"}


id: PBO:0087332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin for late-Golgi enzymes; required to maintain late-Golgi resident enzymes in their proper location by recycling molecules from the prevacuolar compartment; contains a PX domain and sequence similarity to human Snx3p","termid":"PBO:0087332"}


id: GO:0019769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"low-affinity IgE receptor activity","synonyms":[{"name":"low affinity Fc receptor activity","type":"related"},{"name":"low affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019769"}


id: MONDO:0014542
data:
  {"annotated_genes":["SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87143],"is_not":false,"summary":null,"term":"MONDO:0014542"}]},"cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the ALG14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"},{"relation_name":"is_a","term_name":"ALG14-congenital disorder of glycosylation","termid":"MONDO:0100559"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 15","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015596","DOID:0110658","OMIM:616227","GARD:18453","MEDGEN:864033"],"synonyms":[{"name":"ALG14 congenital myasthenic syndrome","type":"exact"},{"name":"CMS15","type":"exact"},{"name":"congenital myasthenic syndrome 15 without tubular aggregates","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in ALG14","type":"exact"},{"name":"congenital myasthenic syndrome type 15","type":"exact"},{"name":"myasthenic syndrome, congenital, 15","type":"related"},{"name":"myasthenic syndrome, congenital, 15, without tubular aggregates","type":"exact"},{"name":"myasthenic syndrome, congenital, type 15","type":"exact"},{"name":"myasthenic syndrome, congenital, without tubular aggregates","type":"related"}],"termid":"MONDO:0014542","terms_by_termid":{"MONDO:0014542":null},"xrefs":{"Monarch":{"xref_id":"0014542"}}}


id: GO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N-acetylserotonin = S-adenosyl-L-homocysteine + melatonin. Melatonin is also known as N-acetyl-5-methoxytryptamine.","definition_xrefs":["EC:2.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"acetylserotonin O-methyltransferase activity","secondary_identifiers":["GO:0017097","MetaCyc:ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN","RHEA:15573"],"synonyms":[{"name":"N-acetylserotonin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N-acetylserotonin O-methyltransferase activity","type":"related"},{"name":"acetylserotonin methyltransferase activity","type":"related"},{"name":"hydroxyindole O-methyltransferase activity","type":"related"},{"name":"hydroxyindole methyltransferase activity","type":"related"}],"termid":"GO:0017096"}


id: GO:2000424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte chemotaxis","termid":"GO:0071624"},{"relation_name":"is_a","term_name":"positive regulation of eosinophil migration","termid":"GO:2000418"},{"relation_name":"is_a","term_name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"},{"relation_name":"positively_regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil chemotaxis","termid":"GO:2000424"}


id: GO:0044596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-10 = S-adenosyl-L-homocysteine + ubiquinol-10.","definition_xrefs":["PMID:10777520"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-10 3-O-methyltransferase activity (obsolete GO:0044596)","termid":"GO:0044596"}


id: GO:0030317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a cilium (aka flagellum) that contributes to the movement of a flagellated sperm.","definition_xrefs":["GOC:TermGenie","GOC:cilia","PMID:26680031","GO_REF:0000060","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium-dependent cell motility","termid":"GO:0060285"},{"relation_name":"is_a","term_name":"cilium movement involved in cell motility","termid":"GO:0060294"},{"relation_name":"is_a","term_name":"sperm motility","termid":"GO:0097722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellated sperm motility","secondary_identifiers":["Wikipedia:Sperm_motility","GO:0097724","GO:1905419"],"synonyms":[{"name":"flagellated sperm movement","type":"exact"},{"name":"sperm flagellum movement","type":"exact"},{"name":"sperm flagellum movement involved in flagellated sperm motility","type":"exact"},{"name":"sperm flagellum movement involved in flagellated sperm movement","type":"exact"},{"name":"sperm motility","type":"broad"},{"name":"sperm movement","type":"broad"}],"termid":"GO:0030317"}


id: SO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the variant by virtue of the number instances of the variant within a population.","definition_xrefs":["SO:ke","PMID:17597783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_frequency","synonyms":[{"name":"variant frequency","type":"exact"}],"termid":"SO:0001763"}


id: PBO:0071034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 36","termid":"PBO:0071034"}


id: FYPO:0003629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spliceosomal tri-snRNP complex assembly is abolished.","definition_xrefs":["PomBase:mah","PMID:12374752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished U2/U5/U6 snRNP complex assembly","synonyms":[{"name":"U2/U5/U6 snRNP complex assembly abolished","type":"exact"},{"name":"abolished U2/U5/U6 snRNP complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished U2/U5/U6 snRNP complex assembly during vegetative growth","type":"exact"},{"name":"abolished U2/U5/U6 tri-snRNP complex assembly abolished","type":"exact"}],"termid":"FYPO:0003629"}


id: PBO:0056657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 24","termid":"PBO:0056657"}


id: MONDO:0013867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brown-Vialetto-van Laere syndrome in which the cause of the disease is a mutation in the SLC52A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin transporter deficiency","termid":"MONDO:0008891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Brown-Vialetto-van Laere syndrome 2","secondary_identifiers":["DOID:0080786","Orphanet:572550","GARD:12861","NCIT:C183529","UMLS:C3553538","HGNC:30224","MEDGEN:766452","OMIM:614707"],"synonyms":[{"name":"BVVLS2","type":"exact"},{"name":"Brown-Vialetto-Van Laere syndrome type 2","type":"exact"},{"name":"Brown-Vialetto-van Laere syndrome 2","type":"exact"},{"name":"Brown-Vialetto-van Laere syndrome caused by mutation in SLC52A2","type":"exact"},{"name":"SLC52A2 Brown-Vialetto-van Laere syndrome","type":"exact"}],"termid":"MONDO:0013867","xrefs":{"Monarch":{"xref_id":"0013867"}}}


id: PBO:0083392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ATS1/YAL020C","termid":"PBO:0083392"}


id: GO:0052811
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93623],"is_not":false,"summary":null,"term":"GO:0052811"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + H+.","definition_xrefs":["PMID:9367159","PMID:9660759","RHEA:63688","PMID:9211928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 4-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1676145","MetaCyc:RXN-10957"],"synonyms":[{"name":"phosphatidylinositol 3-phosphate 4-kinase activity","type":"exact"}],"termid":"GO:0052811","terms_by_termid":{"GO:0052811":null}}


id: MONDO:0024537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brown-Vialetto-van Laere syndrome in which the cause of the disease is a mutation in the SLC52A3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin transporter deficiency","termid":"MONDO:0008891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Brown-Vialetto-van Laere syndrome 1","secondary_identifiers":["DOID:0080785","MEDGEN:163239","Orphanet:572543","GARD:18010","OMIM:211530","NCIT:C133724","UMLS:C0796274"],"synonyms":[{"name":"BVVLS1","type":"related"},{"name":"Brown-Vialetto-Van Laere syndrome 1","type":"exact"},{"name":"Brown-Vialetto-van Laere syndrome 1","type":"exact"},{"name":"Brown-Vialetto-van Laere syndrome caused by mutation in SLC52A3","type":"exact"},{"name":"RTD2","type":"exact"},{"name":"Riboflavin transporter deficiency 2","type":"exact"},{"name":"SLC52A3 Brown-Vialetto-van Laere syndrome","type":"exact"},{"name":"bulbar palsy, progressive, with sensorineural deafness","type":"related"},{"name":"pontobulbar palsy with deafness","type":"related"},{"name":"rfvt2-related riboflavin transporter deficiency","type":"exact"}],"termid":"MONDO:0024537","xrefs":{"Monarch":{"xref_id":"0024537"}}}


id: GO:0097010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 4F complex.","definition_xrefs":["GOC:BHF","PMID:18337562","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 4F complex assembly","synonyms":[{"name":"eIF-4F assembly","type":"exact"},{"name":"eIF4F assembly","type":"exact"}],"termid":"GO:0097010"}


id: PBO:0031163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycine_import","termid":"PBO:0031163"}


id: PBO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta Nda3","termid":"PBO:0004744"}


id: GO:0072107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ureteric bud formation","termid":"GO:0072106"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"positive regulation of epithelial tube formation","termid":"GO:1905278"},{"relation_name":"positively_regulates","term_name":"ureteric bud formation","termid":"GO:0060676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ureteric bud formation","termid":"GO:0072107"}


id: FYPO:0003394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from NADH to ubiquinone is decreased.","definition_xrefs":["PomBase:mah","GO:0006120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular respiration","termid":"FYPO:0000342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"decreased NADH cytochrome c oxidoreductase","type":"related"},{"name":"decreased NADH dehydrogenase (quinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"decreased mitochondrial electron transport, NADH to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial electron transport, NADH to ubiquinone, during vegetative growth","type":"exact"},{"name":"reduced mitochondrial electron transport, NADH to ubiquinone","type":"exact"}],"termid":"FYPO:0003394"}


id: GO:0004446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol hexakisphosphate phosphatase activity","termid":"GO:0004446"}


id: PBO:0068156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 463","termid":"PBO:0068156"}


id: PBO:0058940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocyte inducing transcription factor","termid":"PBO:0058940"}


id: PBO:0031582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_rate","termid":"PBO:0031582"}


id: MONDO:0017207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"primary organ-specific lymphoma","secondary_identifiers":["GARD:21064","MEDGEN:1826175","Orphanet:279911","UMLS:C5680788","NCIT:C7185"],"termid":"MONDO:0017207","xrefs":{"Monarch":{"xref_id":"0017207"}}}


id: PBO:0014292
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Casein KInase","termid":"PBO:0014292"}


id: PBO:0065156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 6","termid":"PBO:0065156"}


id: FYPO:0006834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of primary cell septum biogenesis is increased.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal primary cell septum biogenesis","termid":"FYPO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"increased rate of primary cell septum biogenesis","synonyms":[{"name":"decreased duration of primary cell septum biogenesis","type":"related"},{"name":"increased rate of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"increased rate of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"increased rate of primary septum biogenesis","type":"exact"},{"name":"increased rate of primary septum synthesis","type":"related"}],"termid":"FYPO:0006834"}


id: PBO:0057217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378e","termid":"PBO:0057217"}


id: PBO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex binds MCB 5'-ACGCGT-3'","termid":"PBO:0000534"}


id: MONDO:1012462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, pig","secondary_identifiers":["OMIA:001813-9823"],"termid":"MONDO:1012462","xrefs":{"Monarch":{"xref_id":"1012462"}}}


id: MONDO:0004619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly contagious viral infection caused by the measles virus. Symptoms appear 8-12 days after exposure and include a rash, cough, fever and muscle pains that can last 4-7 days. Measles vaccines are available to provide prophylaxis, usually combined with mumps and rubella vaccines (MMR).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morbillivirus infectious disease","termid":"MONDO:0005857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"measles","secondary_identifiers":["ICD10CM:B05","MEDGEN:6252","NCIT:C96406","ICD9:055","EFO:1002025","MESH:D008457","icd11.foundation:1826431497","SCTID:14189004","DOID:8622","UMLS:C0025007"],"synonyms":[{"name":"Measles morbillivirus caused disease or disorder","type":"exact"},{"name":"Measles morbillivirus disease or disorder","type":"exact"},{"name":"Measles morbillivirus infectious disease","type":"exact"},{"name":"morbilli","type":"exact"},{"name":"rubeola","type":"related"},{"name":"rubeola infection","type":"exact"}],"termid":"MONDO:0004619","xrefs":{"Monarch":{"xref_id":"0004619"}}}


id: PBO:0063225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 10","termid":"PBO:0063225"}


id: MONDO:0020748
data:
  {"annotated_genes":["SJAG_04277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88617],"is_not":false,"summary":null,"term":"MONDO:0020748"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sitosterolemia","termid":"MONDO:0008863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"sitosterolemia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16372","DOID:0060983","MEDGEN:1684715","OMIM:618666","UMLS:C5231453"],"synonyms":[{"name":"STSL2","type":"exact"}],"termid":"MONDO:0020748","terms_by_termid":{"MONDO:0020748":null},"xrefs":{"Monarch":{"xref_id":"0020748"}}}


id: PBO:0034535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_targeting_to_vacuole,_with_protein_secreted","termid":"PBO:0034535"}


id: MONDO:0014604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary late onset Parkinson disease in which the cause of the disease is a mutation in the DNAJC13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 21","secondary_identifiers":["DOID:0111251","UMLS:C4225353","GARD:18480","MEDGEN:903105","OMIM:616361"],"synonyms":[{"name":"DNAJC13 hereditary late onset Parkinson disease","type":"exact"},{"name":"PARK21","type":"related"},{"name":"Parkinson disease 21","type":"exact"},{"name":"Parkinson disease type 21","type":"exact"},{"name":"hereditary late onset Parkinson disease caused by mutation in DNAJC13","type":"exact"}],"termid":"MONDO:0014604","xrefs":{"Monarch":{"xref_id":"0014604"}}}


id: PATO:0000499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased duration","secondary_identifiers":["PATO:0000716"],"synonyms":[{"name":"decreased period","type":"exact"},{"name":"decreased time","type":"exact"},{"name":"fast time","type":"related"},{"name":"low period","type":"exact"},{"name":"shortened period","type":"exact"}],"termid":"PATO:0000499"}


id: PBO:0026688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_carboxypeptidase_activity","termid":"PBO:0026688"}


id: PBO:0060586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 25, pseudogene","termid":"PBO:0060586"}


id: PR:Q9C1W8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.07c gene.","definition_xrefs":["UniProtKB:Q9C1W8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endopolyphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.07c","synonyms":[{"name":"Spom972h-SPBC713.07c","type":"exact"}],"termid":"PR:Q9C1W8"}


id: GO:1900502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butyrate","termid":"GO:1900500"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA catabolic process to butyrate","termid":"GO:0044581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"activation of butyryl-CoA catabolic process to butyrate","type":"narrow"},{"name":"activation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"positive regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"up regulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"up regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolism to butyrate","type":"exact"},{"name":"upregulation of butyryl-CoA catabolic process to butyrate","type":"exact"},{"name":"upregulation of butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:1900502"}


id: PBO:0028062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_transposon-encoded_protein_in_cell","termid":"PBO:0028062"}


id: GO:0043817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-O-phospho-3-sulfolactate = phosphoenolpyruvate + sulfite.","definition_xrefs":["RHEA:22784","EC:4.4.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphosulfolactate synthase activity","secondary_identifiers":["KEGG_REACTION:R07476","MetaCyc:4.4.1.19-RXN"],"synonyms":[{"name":"(2R)-O-phospho-3-sulfolactate sulfo-lyase (phosphoenolpyruvate-forming)","type":"related"},{"name":"(2R)-O-phospho-3-sulfolactate sulfo-lyase activity","type":"exact"},{"name":"(2R)-phospho-3-sulfolactate synthase activity","type":"related"},{"name":"PSL synthase activity","type":"related"}],"termid":"GO:0043817"}


id: PBO:0031881
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding between Myh1 and Hus1 increases in response to oxidative stress","termid":"PBO:0031881"}


id: FYPO:0002064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 3'-5'-exoribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"},{"relation_name":"is_a","term_name":"abolished ribonuclease activity","termid":"FYPO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished 3'-5'-exoribonuclease activity","synonyms":[{"name":"3'-5'-exoribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0002064"}


id: PBO:0062145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 15","termid":"PBO:0062145"}


id: PBO:0073024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2D1 antisense RNA 1","termid":"PBO:0073024"}


id: GO:0010032
data:
  {"annotated_genes":["SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73464],"is_not":false,"summary":null,"term":"GO:0010032"}]},"cv_name":"biological_process","definition":"Compaction of chromatin structure prior to meiosis in eukaryotic cells.","definition_xrefs":["PMID:10072401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic chromosome condensation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"chromosome condensation involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0010032","terms_by_termid":{"GO:0010032":null}}


id: FYPO:0001165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell that is exposed to anaerobic conditions fails to grow upon being returned to aerobic conditions, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable cell following anaerobic growth","synonyms":[{"name":"inviable following anaerobic vegetative growth","type":"exact"},{"name":"lethal; cell following anaerobic growth","type":"exact"}],"termid":"FYPO:0001165"}


id: PBO:0030021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body_during_anaphase,_with_protein_symmetrically_localized_to_both_spindle_pole_bodies","termid":"PBO:0030021"}


id: PBO:0063094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-3 family cell polarity regulator","termid":"PBO:0063094"}


id: GO:0072011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the glomerular endothelium over time, from its formation to the mature structure. The glomerular endothelium is an epithelial tissue that covers the internal surfaces of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelium development","termid":"GO:0003158"},{"relation_name":"is_a","term_name":"glomerular epithelium development","termid":"GO:0072010"},{"relation_name":"part_of","term_name":"glomerulus vasculature development","termid":"GO:0072012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular endothelium development","termid":"GO:0072011"}


id: FYPO:0004551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation exposure during mitotic S phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation. The most common abnormality is for the cell cycle to progress as in the absence of ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following ionizing radiation during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to IR during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to ionizing radiation during mitotic S phase","type":"exact"}],"termid":"FYPO:0004551"}


id: PBO:0074807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 2","termid":"PBO:0074807"}


id: PBO:0119648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEAD1 antisense RNA 1","termid":"PBO:0119648"}


id: PBO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisA","termid":"PBO:0013076"}


id: FYPO:0009069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ciclopirox olamine. Cells stop growing (and may die) at a concentration of ciclopirox olamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to ciclopirox olamine","synonyms":[{"name":"hypersensitive to ciclopirox olamine","type":"exact"},{"name":"sensitive to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"sensitive to ciclopirox olamine during vegetative growth","type":"exact"}],"termid":"FYPO:0009069"}


id: PR:Q10172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup214 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein pan1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.09c","secondary_identifiers":["UniProtKB:Q10172"],"synonyms":[{"name":"SPAC25G10.09c","type":"related"},{"name":"Spom972h-NUP214","type":"exact"}],"termid":"PR:Q10172"}


id: FYECO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Chemical was endogenously produced in the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000060 chemical produced (obsolete FYECO:0000060)","termid":"FYECO:0000060"}


id: PBO:0068118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 425","termid":"PBO:0068118"}


id: GO:0030960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of two peptidyl-tyrosines to form a 3'-(O4'-L-tyrosinyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0368","PDB:1NGK","PMID:12719529"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(O4'-L-tyrosinyl)-L-tyrosine (obsolete GO:0030960)","termid":"GO:0030960"}


id: FYPO:0005079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at centromere central core","synonyms":[{"name":"normal protein localisation to chromatin at centromere central core","type":"exact"},{"name":"normal protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric central core","type":"exact"}],"termid":"FYPO:0005079"}


id: PBO:0084272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localizes primarily to growing sites such as the bud tip or the cell periphery; potential Cdc28p substrate; Skg6p interacts with Zds1p and Zds2p; SKG6 has a paralog, TOS2, that arose from the whole genome duplication","termid":"PBO:0084272"}


id: MONDO:0024857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that develops as a primary tumor in an anatomic site other than the testis or ovary.","definition_xrefs":["NCIT:C8884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"immature teratoma","termid":"MONDO:0024746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"immature extragonadal teratoma","secondary_identifiers":["UMLS:C0855163","MEDGEN:167781"],"synonyms":[{"name":"extragonadal primary malignant teratoma","type":"exact"},{"name":"immature extragonadal teratoma","type":"exact"},{"name":"malignant extragonadal teratoma","type":"exact"},{"name":"primary malignant extragonadal teratoma","type":"exact"}],"termid":"MONDO:0024857","xrefs":{"Monarch":{"xref_id":"0024857"}}}


id: PBO:0083158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the 5' end of ATP1","termid":"PBO:0083158"}


id: GO:0010008
data:
  {"annotated_genes":["SJAG_03347","SJAG_00301","SJAG_03250","SJAG_04513","SJAG_04024","SJAG_04936","SJAG_04822","SJAG_00416","SJAG_01242","SJAG_05210","SJAG_07012","SJAG_03783","SJAG_04349","SJAG_00900","SJAG_02587","SJAG_01981","SJAG_04912","SJAG_01112","SJAG_02429","SJAG_00314","SJAG_02100","SJAG_00108","SJAG_00638","SJAG_00299","SJAG_01236","SJAG_01379","SJAG_04023","SJAG_03892","SJAG_05207","SJAG_03511","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61328,74321,79857,81805,100467,103761,103773],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[92344],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[101496,97677,82005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[89885,73844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[80167,72605,73808],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[71814,72711,72385,77488,79415,77913],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[93776,102870,89886,77792,80165,99443,101293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[63039,121377,60848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[76991,100649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00314":null,"SJAG_00416":null,"SJAG_00638":null,"SJAG_00900":null,"SJAG_01112":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01379":null,"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03511":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"endosome membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao978443756"],"synonyms":[{"name":"endosomal membrane","type":"exact"}],"termid":"GO:0010008","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: FYPO:0005631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased rate of protein degradation during vegetative growth","synonyms":[{"name":"decreased rate of protein breakdown during vegetative growth","type":"exact"},{"name":"decreased rate of protein catabolic process during vegetative growth","type":"exact"},{"name":"decreased rate of protein catabolism during vegetative growth","type":"exact"},{"name":"decreased rate of protein degradation during mitotic cell cycle","type":"related"},{"name":"reduced rate of protein degradation","type":"exact"}],"termid":"FYPO:0005631"}


id: GO:0048308
data:
  {"annotated_genes":["SJAG_02848","SJAG_04315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000001"},{"annotations":[108501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045033"}]},"cv_name":"biological_process","definition":"The partitioning of organelles between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02848":null,"SJAG_04315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle inheritance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048308","terms_by_termid":{"GO:0000001":null,"GO:0045033":null}}


id: MONDO:8000010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder caused by the presence of autoantibodies directed against phospholipids, causing a hypercoaguable state, which may result in blood clots, stroke, heart attack, and in women, significant pregnancy-related complications, including miscarriage and still birth. The syndrome is often associated with other autoimmune disorders, most commonly lupus erythematosus, and infections, including syphilis and Lyme disease.","definition_xrefs":["NCIT:C61283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"antiphospholipid syndrome","secondary_identifiers":["DOID:2988","EFO:0002689","GARD:5824","MESH:D016736","UMLS:C0085278","ICD9:279.49","icd11.foundation:1173370808","SCTID:26843008","Orphanet:80","ICD10CM:D68.61","MEDGEN:38834"],"synonyms":[{"name":"Hughes syndrome","type":"exact"},{"name":"antiphospholipid antibody syndrome","type":"exact"},{"name":"antiphospholipid syndrome","type":"exact"},{"name":"familial lupus anticoagulant","type":"exact"},{"name":"lupus anticoagulant, familial","type":"related"}],"termid":"MONDO:8000010","xrefs":{"Monarch":{"xref_id":"8000010"}}}


id: PBO:0055911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 2","termid":"PBO:0055911"}


id: PR:O14388
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2701 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.07c","synonyms":[{"name":"Spom972h-rpl2701","type":"exact"}],"termid":"PR:O14388"}


id: MONDO:0015564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Castleman disease (CD) is a benign lymphoproliferative disorder that may present as a localized or multicentric form. The clinical manifestations are heterogeneous, ranging from asymptomatic discrete lymphadenopathy to recurrent episodes of diffuse lymphadenopathy with severe systemic symptoms.","definition_xrefs":["Orphanet:160"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"human herpesvirus 8-related tumor","termid":"MONDO:0015157"},{"relation_name":"excluded_subClassOf","term_name":"lymphoid hemopathy","termid":"MONDO:0015757"},{"relation_name":"is_a","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Castleman disease","secondary_identifiers":["icd11.foundation:1940989685","MEDGEN:42211","MESH:D005871","NORD:898","NCIT:C3056","UMLS:C0017531","GARD:12656","SCTID:207036003","MedDRA:10050251","DOID:0111157","ICD10CM:D47.Z2"],"synonyms":[{"name":"AFLH","type":"exact"},{"name":"ALNH","type":"related"},{"name":"Castleman disease","type":"exact"},{"name":"Castleman's disease","type":"exact"},{"name":"Castleman's tumor","type":"exact"},{"name":"Castleman's tumour","type":"exact"},{"name":"GLNH","type":"exact"},{"name":"angiofollicular ganglionic hyperplasia","type":"exact"},{"name":"angiofollicular lymph hyperplasia","type":"exact"},{"name":"angiofollicular lymph node hyperplasia","type":"exact"},{"name":"angiofollicular lymphoid hyperplasia","type":"exact"},{"name":"giant lymph node hyperplasia","type":"exact"},{"name":"lymphoid hamartoma","type":"exact"}],"termid":"MONDO:0015564","xrefs":{"Monarch":{"xref_id":"0015564"}}}


id: PR:O59726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fnx2 gene.","definition_xrefs":["UniProtKB:O59726","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter fnx2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.06c","synonyms":[{"name":"Spom972h-fnx2","type":"exact"}],"termid":"PR:O59726"}


id: MONDO:0020711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid hormone resistance syndrome characterized by resistance in peripheral tissues but not in the pituitary.","definition_xrefs":["PMID:8475937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone resistance syndrome","termid":"MONDO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"selective peripheral resistance to thyroid hormone","synonyms":[{"name":"PerRTH","type":"exact"}],"termid":"MONDO:0020711","xrefs":{"Monarch":{"xref_id":"0020711"}}}


id: PBO:0030109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methionine_import","termid":"PBO:0030109"}


id: PBO:0030203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030203"}


id: PBO:0061674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62","termid":"PBO:0061674"}


id: PR:Q10189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis-specific protein spo12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.15c","synonyms":[{"name":"Spom972h-spo12","type":"exact"}],"termid":"PR:Q10189"}


id: GO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables passage of a chloride ion through a transmembrane channel that opens when ATP is bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:24727426","PMID:9922375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"},{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"intracellularly ATP-gated chloride channel activity","secondary_identifiers":["MetaCyc:3.6.3.49-RXN","GO:0005224","TC:3.A.1.202.1","Wikipedia:Cystic_fibrosis_transmembrane_conductance_regulator","EC:5.6.1.6"],"synonyms":[{"name":"CFTR","type":"exact"},{"name":"channel-conductance-controlling ATPase activity","type":"related"},{"name":"cystic fibrosis transmembrane conductance regulator","type":"narrow"}],"termid":"GO:0005260"}


id: GO:0044695
data:
  {"annotated_genes":["SJAG_01585","SJAG_02703","SJAG_01657","SJAG_03302","SJAG_00552","SJAG_04151"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65969,72810,90754,109819,114651,118229],"is_not":false,"summary":null,"term":"GO:0044695"}]},"cv_name":"cellular_component","definition":"An E3 ubiquitin ligase complex localized to the ER and Golgi membrane. In fission yeast comprises Dsc1, 2, 3 and 4. Involved in the processes of fission yeast sre1 (human SREBP) transcriptional activator proteolytic cleavage, the multivesicular body (MVB) pathway, and a post-endoplasmic reticulum pathway for protein catabolism.","definition_xrefs":["PMID:21504829","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00552":null,"SJAG_01585":null,"SJAG_01657":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_04151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044695","terms_by_termid":{"GO:0044695":null}}


id: PBO:0112396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, alternative splicing factor 45","termid":"PBO:0112396"}


id: PBO:0071119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 121","termid":"PBO:0071119"}


id: MONDO:0019462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Splenic marginal zone lymphoma is a rare, indolent B-cell non-Hodgkin lymphoma characterized by abnormal clonal proliferation of mature B-lymphocytes with involvement in the spleen, bone marrow and, frequently, the blood. It usually presents with splenomegaly, lymphocytosis, anemia and/or thrombocytopenia. Hepatitis C virus and autoimmune manifestations, such as autoimmune hemolytic anemia and autoimmune thrombocytopenia, could be associated.","definition_xrefs":["Orphanet:86854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"marginal zone lymphoma","termid":"MONDO:0017604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"splenic marginal zone lymphoma","secondary_identifiers":["EFO:1000550","GARD:19072","ICDO:9689/3","ONCOTREE:SMZL","UMLS:C0349632","MedDRA:10062113","MEDGEN:138108","DOID:0050750","SCTID:763666008","icd11.foundation:1002343712","NCIT:C4663"],"synonyms":[{"name":"SLVL","type":"exact"},{"name":"SMZL","type":"exact"},{"name":"marginal zone lymphoma of spleen","type":"exact"},{"name":"marginal zone lymphoma of the spleen","type":"exact"},{"name":"splenic lymphoma with circulating villous lymphocytes","type":"exact"},{"name":"splenic marginal zone B-cell lymphoma","type":"exact"},{"name":"splenic marginal zone B-cell lymphoma with villous lymphocytes","type":"exact"},{"name":"splenic marginal zone lymphoma","type":"exact"},{"name":"splenic marginal zone lymphoma with villous lymphocytes","type":"exact"}],"termid":"MONDO:0019462","xrefs":{"Monarch":{"xref_id":"0019462"}}}


id: GO:0046622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:tb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of organ growth","termid":"GO:0046622"}


id: MONDO:0018736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A generalized lymphatic anomaly characterized by kaposiform spindled lymphatic endothelial cells.","definition_xrefs":["PMID:24252784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kaposiform lymphangiomatosis","secondary_identifiers":["UMLS:C5681097","MEDGEN:1807991","icd11.foundation:1139222402","GARD:13451","Orphanet:464329"],"synonyms":[{"name":"KLA","type":"broad"}],"termid":"MONDO:0018736","xrefs":{"Monarch":{"xref_id":"0018736"}}}


id: MOD:00438
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a myristoyl group.","definition_xrefs":["DeltaMass:0","Unimod:45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"myristoylated residue","synonyms":[{"name":"C14:0 aliphatic acylated residue","type":"exact"},{"name":"MyrRes","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"exact"}],"termid":"MOD:00438"}


id: PBO:0049821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC11 antisense RNA 1","termid":"PBO:0049821"}


id: PBO:0025540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-Q homolog Fta7","termid":"PBO:0025540"}


id: PBO:0114092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase membrane subunit, Atp8","termid":"PBO:0114092"}


id: PBO:0075598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPNS lysolipid transporter 2, sphingosine-1-phosphate","termid":"PBO:0075598"}


id: PBO:0086255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that promotes the transport and maturation of Pma1 with Exp1; cleaved specifically by Kex2p; localizes to the Golgi apparatus and to the endoplasmic reticulum in HTP studies","termid":"PBO:0086255"}


id: PBO:0027136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-circularized_chromosome_during_mitotic_G2_phase","termid":"PBO:0027136"}


id: MONDO:0001673
data:
  {"annotated_genes":["SJAG_00938","SJAG_04049","SJAG_04059","SJAG_02463","SJAG_01941","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88178,88177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014375"},{"annotations":[87219,87220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[87052,87053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","definition":"The condition of having at least three loose or liquid bowel movements each day.","definition_xrefs":["Wikipedia:Diarrhea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C2987","UMLS:C1290807","ICD9:009.2","MEDGEN:713159","SCTID:128333008","SCTID:111939009","HP:0002014","DOID:13250","MESH:D003967"],"synonyms":[{"name":"diarrhea","type":"exact"},{"name":"diarrhea of presumed infectious origin","type":"related"},{"name":"diarrheal disease","type":"exact"},{"name":"diarrheal disorder","type":"exact"},{"name":"diarrhoea","type":"exact"},{"name":"diarrhoea of presumed infectious origin","type":"related"},{"name":"frequent stools","type":"exact"},{"name":"loose stools","type":"exact"}],"termid":"MONDO:0001673","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null,"MONDO:0014375":null},"xrefs":{"Monarch":{"xref_id":"0001673"}}}


id: FYPO:0005883
data:
  {"alleles_by_uniquename":{"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121299],"is_not":false,"summary":null,"term":"FYPO:0005883"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03360":null},"genotype_count":1,"genotypes_by_uniquename":{"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"abolished anaerobic cell population growth","references_by_uniquename":{"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_03360"],"single_locus_genotype_uniquenames":["shc1delta"],"synonyms":[{"name":"abolished anaerobic vegetative cell population growth","type":"exact"},{"name":"anaerobic cell population growth abolished","type":"exact"}],"termid":"FYPO:0005883","terms_by_termid":{"FYECO:0000137":null,"FYPO:0005883":null}}


id: PBO:0048619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylated integral membrane protein 1","termid":"PBO:0048619"}


id: PBO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism (predicted)","termid":"PBO:0017565"}


id: PBO:0053536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 538","termid":"PBO:0053536"}


id: PBO:0067236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 307, pseudogene","termid":"PBO:0067236"}


id: MONDO:0006161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic hamartomatous polyp that arises from the colon and rectum. It is characterized by the presence of tortuous and cystically dilated glands, edematous changes, and inflammation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal hamartoma","termid":"MONDO:0006160"},{"relation_name":"is_a","term_name":"juvenile polyp","termid":"MONDO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal juvenile polyp","secondary_identifiers":["NCIT:C5681","MEDGEN:235116","UMLS:C1377708","EFO:1000194"],"synonyms":[{"name":"colorectal retention polyp","type":"exact"},{"name":"juvenile polyp of large bowel","type":"exact"},{"name":"juvenile polyp of the large bowel","type":"exact"},{"name":"large bowel juvenile polyp","type":"exact"},{"name":"large intestinal juvenile polyp","type":"exact"}],"termid":"MONDO:0006161","xrefs":{"Monarch":{"xref_id":"0006161"}}}


id: PBO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin opposite strand/antisense RNA","termid":"PBO:0048601"}


id: PBO:0050187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 4","termid":"PBO:0050187"}


id: MONDO:0010583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of Dyggve-Melchior-Clausen disease.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"Dyggve-Melchior-Clausen disease","termid":"MONDO:0009130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Dyggve-Melchior-Clausen syndrome, X-linked","secondary_identifiers":["GARD:15290","OMIM:304950","UMLS:C1844654","MEDGEN:337052"],"synonyms":[{"name":"Dyggve-Melchior-Clausen disease, X-linked","type":"exact"},{"name":"Dyggve-Melchior-Clausen syndrome, X-linked","type":"exact"},{"name":"X-linked Dyggve-Melchior-Clausen disease","type":"exact"}],"termid":"MONDO:0010583","xrefs":{"Monarch":{"xref_id":"0010583"}}}


id: PBO:0029233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_during_cellular_response_to_salt_stress","termid":"PBO:0029233"}


id: PBO:0043126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 4","termid":"PBO:0043126"}


id: GO:0042633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body.","definition_xrefs":["GOC:go_curators","PMID:12230507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair cycle","termid":"GO:0042633"}


id: PBO:0065303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 16","termid":"PBO:0065303"}


id: PBO:0043224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 3, pseudogene","termid":"PBO:0043224"}


id: GO:0010080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a floral meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meristem growth","termid":"GO:0010075"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"floral meristem growth","termid":"GO:0010451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of floral meristem growth","synonyms":[{"name":"regulation of floral meristem size","type":"exact"}],"termid":"GO:0010080"}


id: GO:0048866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a stem cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["CL:0000034","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"stem cell fate commitment","termid":"GO:0048865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell fate specification","termid":"GO:0048866"}


id: PBO:0052189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNMA1 antisense RNA 2","termid":"PBO:0052189"}


id: PBO:0051734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 5","termid":"PBO:0051734"}


id: GO:0051653
data:
  {"annotated_genes":["SJAG_02651","SJAG_00594","SJAG_02695","SJAG_00140","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106343,106674,98757,78018,118792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process in which is the spindle is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00594":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"spindle localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of spindle localization","type":"exact"},{"name":"spindle localisation","type":"exact"}],"termid":"GO:0051653","terms_by_termid":{"GO:0000132":null}}


id: GO:0097330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluoro-2'-deoxyuridine stimulus. 5-fluoro-2'-deoxyuridine is a pyrimidine 2'-deoxyribonucleoside compound having 5-fluorouracil as the nucleobase; it is used to treat hepatic metastases of gastrointestinal adenocarcinomas and for palliation in malignant neoplasms of the liver and gastrointestinal tract.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluoro-2'-deoxyuridine","termid":"GO:0097330"}


id: PBO:0108541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 6, pseudogene","termid":"PBO:0108541"}


id: GO:0150036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission.","definition_xrefs":["PMID:27296803","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0099553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0150036"}


id: PBO:0058942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 1","termid":"PBO:0058942"}


id: PBO:0025455
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperoxaluria","termid":"PBO:0025455"}


id: PBO:0043518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriolin","termid":"PBO:0043518"}


id: PBO:0116783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"winged helix repair factor 1","termid":"PBO:0116783"}


id: PBO:0109189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase","termid":"PBO:0109189"}


id: GO:0071160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-Asp(4-L-Arg)]n + L-Asp = ADP + phosphate + [L-Asp(4-L-Arg)]n-L-Asp.","definition_xrefs":["EC:6.3.2.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanophycin synthetase activity","termid":"GO:0043860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyanophycin synthetase activity (L-aspartate-adding)","secondary_identifiers":["RHEA:13277"],"termid":"GO:0071160"}


id: MONDO:0018676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"immunoglobulin G4-related sclerosing disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"eosinophilic angiocentric fibrosis","secondary_identifiers":["GARD:21886","MEDGEN:1814179","UMLS:C5578050","icd11.foundation:57609544","Orphanet:449566"],"synonyms":[{"name":"EAF","type":"related"},{"name":"IgG4-related eosinophilic angiocentric fibrosis","type":"exact"},{"name":"Sinonasal eosinophilic angiocentric fibrosis","type":"related"},{"name":"eosinophilic angiocentric fibrosis","type":"exact"}],"termid":"MONDO:0018676","xrefs":{"Monarch":{"xref_id":"0018676"}}}


id: PBO:0079190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 19, pseudogene","termid":"PBO:0079190"}


id: GO:0120289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of intramembrane cleaving aspartic-type endopeptidase activity.","definition_xrefs":["PMID:32616437","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of aspartic endopeptidase activity, intramembrane cleaving (obsolete GO:0120289)","termid":"GO:0120289"}


id: PBO:0039601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 2","termid":"PBO:0039601"}


id: GO:0021827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of olfactory bulb interneuron precursors in the cerebral cortex that occurs after birth.","definition_xrefs":["PMID:12626695","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"},{"relation_name":"is_a","term_name":"tangential migration from the subventricular zone to the olfactory bulb","termid":"GO:0022028"},{"relation_name":"part_of","term_name":"olfactory bulb interneuron development","termid":"GO:0021891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postnatal olfactory bulb interneuron migration","termid":"GO:0021827"}


id: PBO:0051160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-41 (pseudogene)","termid":"PBO:0051160"}


id: MONDO:0025512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of type II hypersensitivity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type II hypersensitivity reaction disease","synonyms":[{"name":"disorder of type II hypersensitivity","type":"exact"},{"name":"type II hypersensitivity disease","type":"exact"}],"termid":"MONDO:0025512","xrefs":{"Monarch":{"xref_id":"0025512"}}}


id: PBO:0051809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain 3 pseudogene 3","termid":"PBO:0051809"}


id: PBO:0075810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 3","termid":"PBO:0075810"}


id: PBO:0088509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide synthase Aur1","termid":"PBO:0088509"}


id: PBO:0064658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A","termid":"PBO:0064658"}


id: GO:0120178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any steroid hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:nln","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"steroid hormone biosynthetic process","termid":"GO:0120178"}


id: MONDO:0017075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"upper thoracic spina bifida cystica","secondary_identifiers":["GARD:20964","Orphanet:268770"],"termid":"MONDO:0017075","xrefs":{"Monarch":{"xref_id":"0017075"}}}


id: PBO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present at telomere ends","termid":"PBO:0000053"}


id: PBO:0078877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA phosphotransferase 1","termid":"PBO:0078877"}


id: MONDO:0014072
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86884],"is_not":false,"summary":null,"term":"MONDO:0014072"}]},"cv_name":"mondo","definition":"D,L-2-hydroxyglutaric aciduria is a rare inborn error of metabolism characterized by severe neonatal epileptic encephalopathy, episodes of apnea and respiratory distress, severe global developmental delay or absent psychomotor development, severe muscular hypotonia or absent voluntary movements, feeding difficulties and failure to thrive, absence of visual contact, abnormal brain morphology (including cerebral atrophy, ventriculomegaly and hypoplasia or dysplasia of the corpus callosum), mild dysmorphic features (frontal bossing, hypertelorism, downslanting palpebral fissures, flat nasal bridge), elevated CSF and plasma lactate and urinary Krebs cycle metabolites.","definition_xrefs":["Orphanet:356978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutaric aciduria","termid":"MONDO:0016001"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"D,L-2-hydroxyglutaric aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:270.8","OMIM:615182","GARD:17540","SCTID:713401006","DOID:0111619","UMLS:C5574940","MEDGEN:1802316"],"synonyms":[{"name":"D,L-2-HGA","type":"exact"},{"name":"D,L-2-hydroxyglutaric acidemia","type":"exact"},{"name":"D,L-2-hydroxyglutaric aciduria","type":"exact"},{"name":"D2L2AD","type":"related"},{"name":"combined D-2- and L-2-hydroxyglutaric aciduria","type":"related"},{"name":"combined D-2-hydroxyglutaric acidemia and L-2-hydroxyglutaric acidemia","type":"exact"},{"name":"combined D-2-hydroxyglutaric aciduria and L-2-hydroxyglutaric aciduria","type":"exact"}],"termid":"MONDO:0014072","terms_by_termid":{"MONDO:0014072":null},"xrefs":{"Monarch":{"xref_id":"0014072"}}}


id: PBO:0060228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker","termid":"PBO:0060228"}


id: GO:0009263
data:
  {"annotated_genes":["SJAG_04657","SJAG_04487","SJAG_00885","SJAG_02948","SJAG_03771","SJAG_04665","SJAG_04627","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[97270,109068,94210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[71588,81164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[72720,70149,94211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[71587,81187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"deoxyribonucleotide metabolic process","termid":"GO:0009262"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleotide anabolism","type":"exact"},{"name":"deoxyribonucleotide biosynthesis","type":"exact"},{"name":"deoxyribonucleotide formation","type":"exact"},{"name":"deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009263","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: PBO:0013130
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PseudoUridine Synthase","termid":"PBO:0013130"}


id: PR:000027545
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A that is a translation product of the yeast HTA2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2","synonyms":[{"name":"H2A.2","type":"exact"},{"name":"H2A2","type":"related"},{"name":"HTA2","type":"exact"}],"termid":"PR:000027545"}


id: PR:P36590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10344:SF0","OMA:SCHPO05042","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.07c","secondary_identifiers":["UniProtKB:P36590"],"synonyms":[{"name":"Spom972h-DTYMK","type":"exact"},{"name":"dTMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36590"}


id: GO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in both sexes of species in which the female is the heterogametic sex. Two copies of the Z chromosome are present in each somatic cell of males and one copy is present in females.","definition_xrefs":["ISBN:0321000382","GOC:mah","GOC:mr","PMID:20622855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Z chromosome","secondary_identifiers":["Wikipedia:ZW_sex-determination_system"],"termid":"GO:0000807"}


id: PBO:0011084
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, Mg2+ Km 3.0 mM","termid":"PBO:0011084"}


id: PBO:0080164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge Y-linked 1B","termid":"PBO:0080164"}


id: GO:0022006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the narrow stripe of cells that lies between the prospective dorsal and ventral thalami. This boundary contains signals that pattern the prethalamic and thalamic territories of the future mid-diencephalon.","definition_xrefs":["PMID:11425897","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","PMID:16452095","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zona limitans intrathalamica formation","synonyms":[{"name":"zli biosynthesis","type":"exact"},{"name":"zli formation","type":"exact"}],"termid":"GO:0022006"}


id: GO:0072421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in DNA damage checkpoint (obsolete GO:0072421)","synonyms":[{"name":"DNA damage checkpoint sensor mechanism","type":"related"},{"name":"DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in DNA damage checkpoint","type":"related"}],"termid":"GO:0072421"}


id: PBO:0064035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 69","termid":"PBO:0064035"}


id: MONDO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed tumor of the thymus composed of islands of normal thymic parenchyma and mature adipose tissue. It is not clear if thymolipoma is a neoplastic or non-neoplastic lesion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of thymus","termid":"MONDO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymus lipoma","secondary_identifiers":["MEDGEN:234427","NCIT:C6452","UMLS:C1336744","DOID:1975"],"synonyms":[{"name":"Thymolipoma","type":"exact"},{"name":"Thymolipomatous hamartoma","type":"exact"},{"name":"lipoma of thymus","type":"exact"},{"name":"thymus lipoma","type":"exact"}],"termid":"MONDO:0002163","xrefs":{"Monarch":{"xref_id":"0002163"}}}


id: FYPO:0006960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of adenosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular adenosine level","synonyms":[{"name":"increased adenosine accumulation","type":"related"},{"name":"increased cellular adenosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular adenosine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006960"}


id: PBO:0062635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 2 pseudogene","termid":"PBO:0062635"}


id: SO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' splice site which does not have the sequence \\\"GT\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"five_prime_cis_splice_site","termid":"SO:0000163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_five_prime_splice_site","synonyms":[{"name":"non canonical 5' splice site","type":"exact"},{"name":"non canonical five prime splice site","type":"exact"},{"name":"non-canonical five prime splice site","type":"exact"}],"termid":"SO:0000679"}


id: GO:0051670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 2,1-beta-D-fructosidic linkages in inulin.","definition_xrefs":["EC:3.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inulinase activity","secondary_identifiers":["MetaCyc:3.2.1.7-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan fructanohydrolase activity","type":"exact"},{"name":"endo-inulinase activity","type":"exact"},{"name":"exoinulinase activity","type":"exact"},{"name":"indoinulinase activity","type":"exact"},{"name":"inulase activity","type":"exact"}],"termid":"GO:0051670"}


id: PBO:0089121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase, unknown specificity, implicated in glutathione metabolism","termid":"PBO:0089121"}


id: PBO:0040985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 family apoptosis regulator BOK","termid":"PBO:0040985"}


id: MONDO:0009680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy-infantile cataract-hypogonadism syndrome is characterized by congenital muscular dystrophy, infantile cataract and hypogonadism. It has been described in seven individuals from an isolated Norwegian village and in one unrelated individual. Transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:1875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital muscular dystrophy-infantile cataract-hypogonadism syndrome","secondary_identifiers":["UMLS:C1850864","OMIM:254000","GARD:835","MEDGEN:376896"],"synonyms":[{"name":"Bassoe syndrome","type":"exact"},{"name":"benign muscular dystrophy with hypergonadotrophic hypogonadism and congenital cataract","type":"related"},{"name":"familial congenital muscular dystrophy with gonadal dysgenesis","type":"related"},{"name":"muscular dystrophy, congenital, infantile with cataract and hypogonadism","type":"related"},{"name":"muscular dystrophy, congenital, with infantile cataract and hypogonadism","type":"related"}],"termid":"MONDO:0009680","xrefs":{"Monarch":{"xref_id":"0009680"}}}


id: MOD:00564
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from Unimod Isotopic label. The Unimod term was extracted when it had not been approved. OBSOLETE because redundant to MOD:01505. Remap to MOD:01505, or one of the child terms MOD:01493 or MOD:01497.","definition_xrefs":["URL:http://docs.appliedbiosystems.com/pebiodocs/04351918.pdf","Unimod:214"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00564 Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry (obsolete MOD:00564)","synonyms":[{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:00564"}


id: PR:Q09843
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01799","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.02","secondary_identifiers":["UniProtKB:Q09843"],"synonyms":[{"name":"Spom972h-RFC4","type":"exact"},{"name":"activator 1 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"replication factor C2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09843"}


id: PBO:0064570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 2","termid":"PBO:0064570"}


id: PBO:0041163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG1 divergent transcript","termid":"PBO:0041163"}


id: SO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site to which a polypeptide will bind with a zinc finger motif, which is characterized by requiring one or more Zinc 2+ ions for stabilized folding.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc_finger_binding_site","synonyms":[{"name":"zinc finger binding site","type":"exact"},{"name":"zinc_fing","type":"exact"}],"termid":"SO:0001971"}


id: FYECO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition specifying the physical texture of the growth medium.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000101 medium texture (obsolete FYECO:0000101)","termid":"FYECO:0000101"}


id: PR:000037033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic cohesin complex subunit Psm3/Smc3 (Schizosaccharomyces pombe) that has been acetylated on two Lys residues equivalent to Lys-105 and Lys-106 of the amino acid sequence represented by UniProtKB:O42649. Example: UniProtKB:O42649, Lys-105/Lys-106, MOD:00723.","definition_xrefs":["PMID:26687354","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cohesin complex subunit Psm3/Smc3 (Schizosaccharomyces pombe)","termid":"PR:000037032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psm3/Ac(K105,K106)","pombase_gene_id":"SPAC10F6.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitotic cohesin complex subunit Psm3/Smc3 acetylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-psm3/Ac:1","type":"exact"},{"name":"UniProtKB:O42649, Lys-105/Lys-106, MOD:00723","type":"narrow"},{"name":"cohesin complex Psm3 subunit acetylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"psm3/Ac(K105,K106)","type":"exact"},{"name":"structural maintenance of chromosomes protein 3 acetylated 1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000037033"}


id: PBO:0025520
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by A. thaliana cdc2bAt","termid":"PBO:0025520"}


id: PBO:0083545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps two other dubious ORFs: YPR170C and YPR170W-B","termid":"PBO:0083545"}


id: PBO:0027658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0027658"}


id: MONDO:0958235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ullrich congenital muscular dystrophy","termid":"MONDO:0000355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy 1B","secondary_identifiers":["MEDGEN:1859300","UMLS:C5935582","DOID:0060942","OMIM:620727"],"termid":"MONDO:0958235","xrefs":{"Monarch":{"xref_id":"0958235"}}}


id: PBO:0035739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_protein_movement_within_plasma_membrane_at_cell_side","termid":"PBO:0035739"}


id: RO:HOM0000001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Similarity that results from common evolutionary origin.","direct_ancestors":[{"relation_name":"is_a","term_name":"shares_ancestor_with","termid":"RO:0002158"},{"relation_name":"is_a","term_name":"in_similarity_relationship_with","termid":"RO:HOM0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homology_relationship_with","synonyms":[{"name":"homologous to","type":"exact"}],"termid":"RO:HOM0000001"}


id: MONDO:0022993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus caused by excessive intake of water due to psychological factors or damage to the thirst-regulating mechanism.","definition_xrefs":["NCIT:C129735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"},{"relation_name":"is_a","term_name":"primary polydipsia","termid":"MONDO:0040870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"dipsogenic diabetes insipidus","secondary_identifiers":["MEDGEN:82829","MESH:C548013","SCTID:82800008","UMLS:C0268813","DOID:0081058"],"synonyms":[{"name":"Dipsogenic diabetes insipidus","type":"exact"},{"name":"dipsogenic diabetes insipidus","type":"exact"},{"name":"primary polydipsia","type":"broad"}],"termid":"MONDO:0022993","xrefs":{"Monarch":{"xref_id":"0022993"}}}


id: PBO:0072584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog A","termid":"PBO:0072584"}


id: PBO:0038438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 4","termid":"PBO:0038438"}


id: PBO:0036481
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat consensus HHDNSNKESTNLDDLNMLEEPK","termid":"PBO:0036481"}


id: GO:0032322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone metabolic process","termid":"GO:0006743"},{"relation_name":"is_a","term_name":"quinone catabolic process","termid":"GO:1901662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ubiquinone catabolic process","synonyms":[{"name":"ubiquinone breakdown","type":"exact"},{"name":"ubiquinone catabolism","type":"exact"},{"name":"ubiquinone degradation","type":"exact"}],"termid":"GO:0032322"}


id: PBO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transport regulatory factor (predicted)","termid":"PBO:0016934"}


id: GO:0045117
data:
  {"annotated_genes":["SJAG_03652","SJAG_03400","SJAG_04673","SJAG_00835","SJAG_03256","SJAG_02962"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[105628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[105433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[102466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[91916,91915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of azoles, heterocyclic compounds found in many biologically important substances, across a lipid bilayer, across a membrane.","definition_xrefs":["ISBN:3527307206","Wikipedia:Azole","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"azole transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"azole transport","type":"related"}],"termid":"GO:0045117","terms_by_termid":{"GO:0071934":null,"GO:0089708":null,"GO:0090513":null,"GO:0140125":null,"GO:1990545":null}}


id: PBO:0086612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein localizes to the cytoplasm; overexpression causes cell cycle delay or arrest; contains a PH domain and binds phosphatidylinositols and other lipids in a large-scale study; YHR131C has a paralog, YNL144C, that arose from the whole genome duplication","termid":"PBO:0086612"}


id: PBO:0063565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proenkephalin","termid":"PBO:0063565"}


id: MONDO:0003750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor of the central nervous system occurring in children.","definition_xrefs":["NCIT:C6205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"childhood germ cell tumor","termid":"MONDO:0003751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood central nervous system germ cell tumor","secondary_identifiers":["DOID:6052","UMLS:C0278754","MEDGEN:124505"],"synonyms":[{"name":"central nervous system childhood germ cell tumor","type":"exact"},{"name":"central nervous system childhood germ cell tumour","type":"exact"},{"name":"central nervous system germ cell tumor","type":"broad"},{"name":"central nervous system germ cell tumour","type":"broad"},{"name":"central nervous system paediatric germ cell cancer","type":"exact"},{"name":"central nervous system pediatric germ cell cancer","type":"exact"},{"name":"childhood CNS germ cell neoplasm","type":"exact"},{"name":"childhood CNS germ cell tumor","type":"exact"},{"name":"childhood CNS germ cell tumour","type":"exact"},{"name":"childhood central nervous system germ cell neoplasm","type":"exact"},{"name":"childhood central nervous system germ cell tumor","type":"exact"},{"name":"childhood germ cell neoplasm of CNS","type":"exact"},{"name":"childhood germ cell neoplasm of central nervous system","type":"exact"},{"name":"childhood germ cell neoplasm of the CNS","type":"exact"},{"name":"childhood germ cell neoplasm of the central nervous system","type":"exact"},{"name":"childhood germ cell tumor of CNS","type":"exact"},{"name":"childhood germ cell tumor of central nervous system","type":"exact"},{"name":"childhood germ cell tumor of the CNS","type":"exact"},{"name":"childhood germ cell tumor of the central nervous system","type":"exact"},{"name":"childhood germ cell tumour of CNS","type":"exact"},{"name":"childhood germ cell tumour of central nervous system","type":"exact"},{"name":"childhood germ cell tumour of the CNS","type":"exact"},{"name":"childhood germ cell tumour of the central nervous system","type":"exact"},{"name":"paediatric CNS germ cell neoplasm","type":"exact"},{"name":"paediatric CNS germ cell tumour","type":"exact"},{"name":"paediatric central nervous system germ cell neoplasm","type":"exact"},{"name":"paediatric central nervous system germ cell tumour","type":"exact"},{"name":"paediatric germ cell neoplasm of CNS","type":"exact"},{"name":"paediatric germ cell neoplasm of central nervous system","type":"exact"},{"name":"paediatric germ cell neoplasm of the CNS","type":"exact"},{"name":"paediatric germ cell neoplasm of the central nervous system","type":"exact"},{"name":"paediatric germ cell tumour of CNS","type":"exact"},{"name":"paediatric germ cell tumour of central nervous system","type":"exact"},{"name":"paediatric germ cell tumour of the CNS","type":"exact"},{"name":"paediatric germ cell tumour of the central nervous system","type":"exact"},{"name":"pediatric CNS germ cell neoplasm","type":"exact"},{"name":"pediatric CNS germ cell tumor","type":"exact"},{"name":"pediatric central nervous system germ cell neoplasm","type":"exact"},{"name":"pediatric central nervous system germ cell tumor","type":"exact"},{"name":"pediatric germ cell neoplasm of CNS","type":"exact"},{"name":"pediatric germ cell neoplasm of central nervous system","type":"exact"},{"name":"pediatric germ cell neoplasm of the CNS","type":"exact"},{"name":"pediatric germ cell neoplasm of the central nervous system","type":"exact"},{"name":"pediatric germ cell tumor of CNS","type":"exact"},{"name":"pediatric germ cell tumor of central nervous system","type":"exact"},{"name":"pediatric germ cell tumor of the CNS","type":"exact"},{"name":"pediatric germ cell tumor of the central nervous system","type":"exact"}],"termid":"MONDO:0003750","xrefs":{"Monarch":{"xref_id":"0003750"}}}


id: MONDO:0012110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Growth delay due to insulin-like growth factor I deficiency is characterized by the association of intrauterine and postnatal growth retardation with sensorineural deafness and intellectual deficit.","definition_xrefs":["Orphanet:73272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth delay due to insulin-like growth factor type 1 deficiency","secondary_identifiers":["MEDGEN:373337","SCTID:724385009","OMIM:608747","UMLS:C1837475","MESH:C563867","GARD:10627"],"synonyms":[{"name":"IGF-1 deficiency","type":"exact"},{"name":"IGF1 deficiency","type":"related"},{"name":"growth delay-deafness- intellectual disability syndrome","type":"exact"},{"name":"growth retardation with deafness and mental retardation due to IGF1 deficiency","type":"exact"},{"name":"growth retardation with sensorineural deafness and intellectual disability","type":"related"},{"name":"growth retardation with sensorineural deafness and mental retardation","type":"related"},{"name":"insulin-like growth Factor 1 deficiency","type":"related"},{"name":"insulin-like growth factor I deficiency","type":"related"},{"name":"primary insulin-like growth factor deficiency","type":"exact"}],"termid":"MONDO:0012110","xrefs":{"Monarch":{"xref_id":"0012110"}}}


id: MONDO:0015028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 48,XXYY syndrome represents a chromosomal anomaly of the aneuploidic type characterized by the presence of an extra X and Y chromosome in males.","definition_xrefs":["Orphanet:10"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"48,XXYY syndrome","secondary_identifiers":["MedDRA:10048230","SCTID:403760006","UMLS:C2936741","GARD:5677","MEDGEN:422434","NCIT:C89801","NORD:2038","ICD9:758.81"],"synonyms":[{"name":"48, XXYY Syndrome","type":"exact"},{"name":"48, XXYY syndrome","type":"exact"},{"name":"48,XXYY Klinefelter syndrome","type":"related"},{"name":"48,XXYY variant of Klinefelter's syndrome","type":"related"},{"name":"XXYY syndrome","type":"related"}],"termid":"MONDO:0015028","xrefs":{"Monarch":{"xref_id":"0015028"}}}


id: PBO:0045367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3","termid":"PBO:0045367"}


id: GO:0051764
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91098],"is_not":false,"summary":null,"term":"GO:0051764"}]},"cv_name":"biological_process","definition":"The process in which two or more actin filaments are connected together by proteins that act as crosslinks between the filaments. The crosslinked filaments may be on the same or differing axes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"actin crosslink formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin bundling","type":"related"},{"name":"actin crosslinking","type":"exact"},{"name":"bridging actin filaments","type":"narrow"},{"name":"formation of actin crosslink","type":"exact"}],"termid":"GO:0051764","terms_by_termid":{"GO:0051764":null}}


id: PBO:0079201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 5","termid":"PBO:0079201"}


id: MONDO:0001382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatorenal syndrome is a form of impaired kidney function that occurs in individuals with advanced chronic liver disease. As many as 40% of individuals with cirrhosis and ascites will develop hepatorenal syndrome. Symptoms may include fatigue, abdominal pain, and a general feeling of ill health (malaise). There are two distinct types of hepatorenal syndrome. Type I progresses quickly (within days), leading to kidney failure. Individuals with type I typically have dramatically reduced urine output, edema, and jaundice, and often suffer from hepatic encephalopathy. Type II progresses more slowly, over weeks or months, and the symptoms are less severe. The cause of hepatorenal syndrome is unknown. A contributing factor seems to be a narrowing of the blood vessels that connect into the kidneys. This causes a decrease in blood flow to the kidneys, impairing their function. In some cases, triggers or precipitating factors (infections, blood loss from the gastrointestinal tract, low blood pressure) are involved. Treatment is aimed at helping the liver work better and maintaining kidney function. In many cases, a liver transplant is needed. In some cases, individuals also need a kidney transplant.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute kidney failure","termid":"MONDO:0002492"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatorenal syndrome","secondary_identifiers":["MESH:D006530","NCIT:C113400","DOID:11823","ICD10CM:K76.7","MEDGEN:9224","icd11.foundation:1015890899","UMLS:C0019212","ICD9:572.4","SCTID:51292008"],"synonyms":[{"name":"hepato-renal syndrome","type":"related"}],"termid":"MONDO:0001382","xrefs":{"Monarch":{"xref_id":"0001382"}}}


id: MONDO:1011164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, cattle","secondary_identifiers":["OMIA:000747-9913"],"termid":"MONDO:1011164","xrefs":{"Monarch":{"xref_id":"1011164"}}}


id: GO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-aminoadipate + acetyl-CoA = N2-acetyl-alpha-aminoadipate + coenzyme A.","definition_xrefs":["PMID:29053735","PMID:12925802","PMID:10613839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alpha-aminoadipate acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-5181","GO:0043869"],"synonyms":[{"name":"L-2-aminoadipate N-acetyltransferase activity","type":"related"}],"termid":"GO:0043741"}


id: GO:0043438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetoacetic acid, 3-oxobutanoic acid; the empirical formula is C4H6O3 or CH3COCH2COOH.","definition_xrefs":["Wikipedia:Acetoacetic_acid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"acetoacetic acid metabolic process","synonyms":[{"name":"3-oxobutanoate metabolic process","type":"exact"},{"name":"3-oxobutanoate metabolism","type":"exact"},{"name":"3-oxobutanoic acid metabolic process","type":"exact"},{"name":"3-oxobutanoic acid metabolism","type":"exact"},{"name":"acetoacetate metabolic process","type":"exact"},{"name":"acetoacetate metabolism","type":"exact"},{"name":"acetoacetic acid metabolism","type":"exact"},{"name":"beta ketobutyric acid metabolic process","type":"exact"},{"name":"beta ketobutyric acid metabolism","type":"exact"},{"name":"beta-ketobutyric acid metabolic process","type":"exact"},{"name":"beta-ketobutyric acid metabolism","type":"exact"},{"name":"diacetic acid metabolic process","type":"exact"},{"name":"diacetic acid metabolism","type":"exact"}],"termid":"GO:0043438"}


id: FYPO:0005299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0002102"},{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint","termid":"FYPO:0006578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000257","FYPO:0000631","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005299"}


id: PBO:0052355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 5B","termid":"PBO:0052355"}


id: PBO:0028665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_processing","termid":"PBO:0028665"}


id: FYPO:0008342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transfer RNAs measured in a cell is lower than normal. Total tRNA or a specific tRNA may be affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased pre-tRNA or mature level during vegetative growth","termid":"FYPO:0008342"}


id: GO:1990490
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large proton-transporting two-sector ATPase protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane and is found in Archaea.","definition_xrefs":["GOC:mengo_curators","PMID:24650628","PMID:15473999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"},{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"archaeal proton-transporting A-type ATPase complex","synonyms":[{"name":"A-type ATPase protein complex","type":"broad"},{"name":"archaeal A-type ATPase protein complex","type":"broad"}],"termid":"GO:1990490"}


id: MONDO:0019724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Secondary glomerular diseases are conditions with glomerular pathology in which an underlying cause can be established.","gene_count":0,"genotype_count":0,"name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","secondary_identifiers":["Orphanet:93551"],"termid":"MONDO:0019724","xrefs":{"Monarch":{"xref_id":"0019724"}}}


id: PR:G2TRR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.32","synonyms":[{"name":"Spom972h-SPBP8B7.32","type":"exact"}],"termid":"PR:G2TRR5"}


id: MONDO:0005618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders which are characterized by anxious feelings or fear often accompanied by physical symptoms associated with anxiety.","definition_xrefs":["NCIT:C2878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anxiety disorder","secondary_identifiers":["UMLS:C0003469","SCTID:197480006","EFO:0006788","ICD9:300.09","MEDGEN:361","DOID:2030","MESH:D001008"],"synonyms":[{"name":"anxiety","type":"broad"},{"name":"anxiety disorder","type":"exact"},{"name":"anxiety state","type":"exact"}],"termid":"MONDO:0005618","xrefs":{"Monarch":{"xref_id":"0005618"}}}


id: MONDO:0010382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fragile X-associated tremor/ataxia syndrome (FXTAS) is a rare neurodegenerative disorder characterized by adult-onset progressive intention tremor and gait ataxia.","definition_xrefs":["Orphanet:93256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"fragile X-associated tremor/ataxia syndrome","secondary_identifiers":["MESH:C564105","DOID:0050879","MEDGEN:333403","UMLS:C1839780","NANDO:1200691","GARD:16806","NANDO:1200690","NCIT:C126566","SCTID:448045004","OMIM:300623"],"synonyms":[{"name":"FXTAS","type":"related"},{"name":"FXTAS syndrome","type":"exact"},{"name":"Fragile X tremor/ataxia syndrome, X-linked dominant","type":"exact"},{"name":"fragile 10 tremor/ataxia syndrome","type":"related"},{"name":"fragile X tremor/ataxia syndrome","type":"related"}],"termid":"MONDO:0010382","xrefs":{"Monarch":{"xref_id":"0010382"}}}


id: PBO:0083802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein suggested to function early in the secretory pathway; inviability is suppressed by overexpression of Golgi protein Tvp23p; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and cytosol respectively; ortholog of human Kish","termid":"PBO:0083802"}


id: PBO:0058813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7855","termid":"PBO:0058813"}


id: FYPO:0001377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"decreased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"decreased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"decreased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001377"}


id: GO:0018546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-phenylhydroxylamine + 2 NADP+ = 2 H+ + 2 NADPH + nitrobenzene.","definition_xrefs":["PMID:16517619","RHEA:52884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitrobenzene nitroreductase (NADPH) activity","secondary_identifiers":["MetaCyc:RXN-8815","EC:1.7.1.16","UM-BBD_enzymeID:r0303"],"termid":"GO:0018546"}


id: PBO:0110384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3121","termid":"PBO:0110384"}


id: GO:0099189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the spectrin-associated cytoskeleton contained within the postsynapse.","definition_xrefs":["PMID:28576936","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spectrin-associated cytoskeleton","termid":"GO:0014731"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton","termid":"GO:0099189"}


id: GO:1990179
data:
  {"annotated_genes":["SJAG_00279","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94099,120509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the actomyosin contractile ring.","definition_xrefs":["PMID:23349808","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring","type":"exact"}],"termid":"GO:1990179","terms_by_termid":{"GO:1904498":null}}


id: GO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 methylation (obsolete GO:0051570)","termid":"GO:0051570"}


id: GO:0046039
data:
  {"annotated_genes":["SJAG_02887","SJAG_01298","SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104032,65569,76590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01298":null,"SJAG_02887":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GTP metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GTP metabolism","type":"exact"}],"termid":"GO:0046039","terms_by_termid":{"GO:0006183":null}}


id: MONDO:0009139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dyssegmental dysplasia, Rolland-Desbuquois type","secondary_identifiers":["MESH:C537999","icd11.foundation:1291444727","UMLS:C0432209","MEDGEN:98145","GARD:9810","Orphanet:156731","OMIM:224400","SCTID:95243004","ICD9:756.59"],"synonyms":[{"name":"Anisospondylic Camptomicromelic dwarfism, Rolland-Desbuquois type","type":"related"},{"name":"Anisospondylic camptomicromelic dwarfism Rolland-Desbuquois type","type":"related"},{"name":"Ddrd","type":"related"},{"name":"dyssegmental dwarfism Rolland-Desbuquois type","type":"related"},{"name":"dyssegmental dwarfism, Rolland-Desbuquois type","type":"related"},{"name":"dyssegmental dysplasia Rolland-Desbuquois type","type":"related"},{"name":"dyssegmental dysplasia, Rolland-Desbuquois type","type":"exact"}],"termid":"MONDO:0009139","xrefs":{"Monarch":{"xref_id":"0009139"}}}


id: MONDO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urinary bladder anterior wall cancer","secondary_identifiers":["DOID:11814","ICD9:188.3","UMLS:C0153611","MEDGEN:509339","SCTID:188242006"],"synonyms":[{"name":"malignant neoplasm of anterior wall of urinary bladder","type":"exact"}],"termid":"MONDO:0001376","xrefs":{"Monarch":{"xref_id":"0001376"}}}


id: MONDO:0700198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoma that occurs in a pig.","definition_xrefs":["NCIT:C134786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine lymphoma","termid":"MONDO:0700198","xrefs":{"Monarch":{"xref_id":"0700198"}}}


id: GO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-acetylglucosamine from one side of a membrane to the other. The D isomer of N-acetylglucosamine is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"N-acetylglucosamine transmembrane transporter activity","secondary_identifiers":["GO:0015580"],"synonyms":[{"name":"D-GlcNAc transmembrane transporter activity","type":"exact"},{"name":"N-Acetyl-D-glucosamine permease","type":"related"},{"name":"N-acetyl-D-glucosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylchitosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylglucosamine permease activity","type":"related"}],"termid":"GO:0015572"}


id: PBO:0081584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 512","termid":"PBO:0081584"}


id: MONDO:0700122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any BAFopathy in which the cause of the disease is a mutation in the PBRM1 gene.","definition_xrefs":["PMID:30580808","MONDO:patterns/OMIM_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBRM1-related BAFopathy","termid":"MONDO:0700122","xrefs":{"Monarch":{"xref_id":"0700122"}}}


id: MONDO:0002421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chorioangioma (obsolete MONDO:0002421)","termid":"MONDO:0002421","xrefs":{"Monarch":{"xref_id":"0002421"}}}


id: PATO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits shape variation or change.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of shape","termid":"PATO:0001929"}


id: FYECO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was carried out in vitro.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in vitro","termid":"FYECO:0000140"}


id: GO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a glycoprotein from one side of a membrane to the other.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein transmembrane transporter activity (obsolete GO:0034437)","synonyms":[{"name":"glycoprotein transporter activity","type":"related"}],"termid":"GO:0034437"}


id: PBO:0083350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene HED1/YDR014W-A","termid":"PBO:0083350"}


id: PBO:0050029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA-DQB1 antisense RNA 1","termid":"PBO:0050029"}


id: PBO:0091328
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Protein Sorting","termid":"PBO:0091328"}


id: GO:0044001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of an organism from one place to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"migration in host","synonyms":[{"name":"migration within host","type":"exact"}],"termid":"GO:0044001"}


id: MONDO:0016706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, slow-growing neuroepithelial neoplasm of uncertain origin affecting adults. It is located in the third ventricle. It is characterized by the presence of epithelioid cells which express GFAP, and mucinous stroma which contains lymphoplasmacytic infiltrates.","definition_xrefs":["NCIT:C5592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral ventricle cancer","termid":"MONDO:0002682"},{"relation_name":"is_a","term_name":"diencephalic cancer","termid":"MONDO:0002786"},{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"chordoid glioma of the third ventricle","secondary_identifiers":["SCTID:715900001","DOID:3773","DOID:3774","GARD:20715","ONCOTREE:CHGL","Orphanet:251674","ICDO:9444/1","UMLS:C1322252","MEDGEN:232956"],"synonyms":[{"name":"chordoid glioma","type":"exact"},{"name":"chordoid glioma (morphologic abnormality)","type":"exact"},{"name":"chordoid glioma of 3rd ventricle","type":"exact"},{"name":"chordoid glioma of the 3rd ventricle","type":"exact"},{"name":"chordoid glioma of the third ventricle","type":"exact"},{"name":"chordoid glioma of the third ventricle (WHO grade II)","type":"exact"},{"name":"chordoid glioma of third ventricle","type":"exact"},{"name":"third ventricle chordoid glioma","type":"exact"}],"termid":"MONDO:0016706","xrefs":{"Monarch":{"xref_id":"0016706"}}}


id: GO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the lens of an eye.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of eye lens","termid":"GO:0005212"}


id: PBO:0065339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune exopolyphosphatase 1","termid":"PBO:0065339"}


id: PBO:0051333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-29","termid":"PBO:0051333"}


id: PBO:0058352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4725","termid":"PBO:0058352"}


id: PBO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 1","termid":"PBO:0052223"}


id: PBO:0060090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 37","termid":"PBO:0060090"}


id: GO:0045140
data:
  {"annotated_genes":["SJAG_00506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99286],"is_not":false,"summary":null,"term":"GO:0045140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phytoceramide + inositol phosphate = inositol phosphoceramide + diacylglycerol.","definition_xrefs":["PMID:9405490","PMID:9614099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"inositol phosphoceramide synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.227","MetaCyc:RXN3O-581"],"synonyms":[{"name":"IPC synthase activity","type":"exact"}],"termid":"GO:0045140","terms_by_termid":{"GO:0045140":null}}


id: MONDO:0000820
data:
  {"annotated_genes":["SJAG_01718"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0975952"}]},"cv_name":"mondo","definition":"A disorder characterized by malformations in the structure of the capillaries in the brain. It is caused by mutations in the CCM2, KRIT1 and PDCD10 genes. The capillaries fill with blood and stretch, thereby creating cavernous spaces. Some patients experience headaches, seizures, or visual and hearing disturbances. Cerebral hemorrhage may also occur.","definition_xrefs":["NCIT:C84626"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system hemangioma","termid":"MONDO:0003241"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:418825","DOID:0060669","UMLS:C2919945","Orphanet:164","icd11.foundation:916773262"],"synonyms":[{"name":"CCM","type":"exact"},{"name":"brain cavernous hemangioma","type":"exact"},{"name":"cavernous angiomatous malformations","type":"exact"},{"name":"cerebral capillary malformations","type":"exact"},{"name":"cerebral cavernous malformation","type":"exact"},{"name":"familial cavernous angioma","type":"related"}],"termid":"MONDO:0000820","terms_by_termid":{"MONDO:0975952":null},"xrefs":{"Monarch":{"xref_id":"0000820"}}}


id: GO:0010945
data:
  {"annotated_genes":["SJAG_03443","SJAG_02247","SJAG_01180"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61912,68144,68786],"is_not":false,"summary":null,"term":"GO:0010945"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an acyl-coenzyme A or its derivatives + H2O = adenosine 3',5'-bisphosphate + an acyl-4'-phosphopantetheine + 2 H+. This reaction can also use coenzyme A as a substrate.","definition_xrefs":["PMID:10922370","PMID:16185196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_02247":null,"SJAG_03443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"coenzyme A diphosphatase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-6809354","Reactome:R-HSA-9837354","Reactome:R-HSA-6810474"],"synonyms":[{"name":"CoA diphosphatase activity","type":"related"},{"name":"CoA pyrophosphatase activity","type":"related"},{"name":"coenzyme A pyrophosphatase activity","type":"related"}],"termid":"GO:0010945","terms_by_termid":{"GO:0010945":null}}


id: PBO:0040269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM serine/threonine kinase","termid":"PBO:0040269"}


id: MONDO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising in the central nervous system. It is characterized by the presence of primitive, large malignant germ cells and lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"germinoma","secondary_identifiers":["HP:0100620","ONCOTREE:GMN","DOID:3304","UMLS:C0206660","MEDGEN:64626","MESH:D018237","NCIT:C3753","ICDO:9064/3"],"synonyms":[{"name":"germinoma","type":"exact"},{"name":"germinoma (disease)","type":"exact"}],"termid":"MONDO:0002598","xrefs":{"Monarch":{"xref_id":"0002598"}}}


id: MOD:01586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and a glycine residue by an ester bond to form O-glycyl-L-threonine.","definition_xrefs":["PubMed:17502423","RESID:AA0496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-[(aminoacetyl)oxy]butanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl threonine ester (Gly-Thr) (interchain with T-...)","type":"exact"},{"name":"CROSSLNK Glycyl threonine ester (Thr-Gly) (interchain with G-...)","type":"exact"},{"name":"O-(glycyl)-L-threonine","type":"exact"},{"name":"O3-(2-aminoacetyl)threonine","type":"exact"},{"name":"threonine glycinate ester","type":"exact"}],"termid":"MOD:01586"}


id: GO:0034510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which centromeres are physically detached from each other during chromosome separation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"centromere separation","termid":"GO:0034510"}


id: PBO:0054348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1741","termid":"PBO:0054348"}


id: PBO:0004539
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.3.14","termid":"PBO:0004539"}


id: PBO:0087966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the mitochondrial inner membrane that exports magnesium; involved in mitochondrial Mg2+ homeostasis; has similarity to human mitochondrial ATP-Mg/Pi carriers","termid":"PBO:0087966"}


id: PR:O43052
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-type GTPase-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.05","synonyms":[{"name":"Spom972h-rga1","type":"exact"}],"termid":"PR:O43052"}


id: MONDO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, non-metastasizing cystic epithelial neoplasm arising from the exocrine pancreas. It is composed of glycogen-rich epithelial cells which produce a watery fluid. Signs and symptoms include abdominal mass, abdominal pain, nausea, vomiting, and weight loss.","definition_xrefs":["NCIT:C5712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic cystadenoma","termid":"MONDO:0002809"},{"relation_name":"is_a","term_name":"serous cystadenoma","termid":"MONDO:0005177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic serous cystadenoma","secondary_identifiers":["UMLS:C1335316","ONCOTREE:PSC","DOID:3917","MEDGEN:233833"],"synonyms":[{"name":"PSC","type":"related"},{"name":"pancreas serous cystadenoma","type":"exact"},{"name":"pancreatic microcystic adenoma","type":"exact"},{"name":"pancreatic serous cystadenoma","type":"exact"},{"name":"serous cystadenoma of pancreas","type":"exact"},{"name":"serous cystadenoma of the pancreas","type":"exact"}],"termid":"MONDO:0002808","xrefs":{"Monarch":{"xref_id":"0002808"}}}


id: MONDO:0008587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tracheobronchopathia osteochondroplastica (TO) is an idiopathic and benign disease of the large airways characterized by submucosal osteocartilaginous nodules presenting in the trachea with or without the involvement of the major bronchi.","definition_xrefs":["Orphanet:3348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheobronchopathia osteochondroplastica","secondary_identifiers":["OMIM:189961","icd11.foundation:1797446244","MESH:C536977","MEDGEN:854438","GARD:5235","UMLS:C3887588","SCTID:54675009"],"synonyms":[{"name":"cartilaginous or bony projections into the tracheobronchial lumen","type":"related"},{"name":"tracheobronchopathia osteochondroplastica","type":"exact"},{"name":"tracheobronchopathia osteoplastica","type":"related"},{"name":"tracheopathia osteoplastica","type":"exact"}],"termid":"MONDO:0008587","xrefs":{"Monarch":{"xref_id":"0008587"}}}


id: MOD:00216
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-formyl-L-lysine.","definition_xrefs":["OMSSA:43","Unimod:122#K","PubMed:15799070","RESID:AA0211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-formyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(formylamino)hexanoic acid","type":"exact"},{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"},{"name":"MOD_RES N6-formyllysine","type":"exact"},{"name":"N(zeta)-formyllysine","type":"exact"},{"name":"N6-formyl-L-lysine","type":"exact"},{"name":"N6-formylated L-lysine","type":"exact"},{"name":"N6FoLys","type":"exact"},{"name":"epsilon-formyllysine","type":"exact"},{"name":"formylk","type":"exact"}],"termid":"MOD:00216"}


id: PBO:0085022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinic acid mononucleotide adenylyltransferase; catalyzes the transfer of the adenylyl moiety of ATP to nicotinamide mononucleotide to form NAD; involved in pathways of NAD biosynthesis, including the de novo, NAD(+) salvage, and nicotinamide riboside salvage pathways; homolog of human NMNAT; NMA1 has a paralog, NMA2, that arose from the whole genome duplication","termid":"PBO:0085022"}


id: MONDO:0012312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any short QT syndrome in which the cause of the disease is a mutation in the KCNH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short QT syndrome","termid":"MONDO:0000453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"short QT syndrome type 1","secondary_identifiers":["GARD:18633","MESH:C566506","OMIM:609620","UMLS:C1865020","MEDGEN:355891"],"synonyms":[{"name":"KCNH2 short QT syndrome","type":"exact"},{"name":"SQT1","type":"related"},{"name":"SQTS","type":"exact"},{"name":"short QT syndrome 1","type":"related"},{"name":"short QT syndrome caused by mutation in KCNH2","type":"exact"},{"name":"short QT syndrome type 1","type":"exact"}],"termid":"MONDO:0012312","xrefs":{"Monarch":{"xref_id":"0012312"}}}


id: FYPO:0003610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and a branch forms adjacent to an existing septum.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"branched, elongated cell with branch forming adjacent to septum","synonyms":[{"name":"branched, elongated cell with branch forming adjacent to septum during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell with branch forming adjacent to septum during vegetative growth","type":"exact"},{"name":"branched, elongated vegetative cell with branch forming adjacent to septum","type":"exact"}],"termid":"FYPO:0003610"}


id: PR:Q9P7D7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional protein aas that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.11c","secondary_identifiers":["UniProtKB:Q9P7D7"],"synonyms":[{"name":"SPBP4H10.11c","type":"related"},{"name":"Spom972h-aas","type":"exact"},{"name":"fatty acid activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7D7"}


id: FYPO:0007868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a substance that inhibits actin polymerization. Cells stop growing (and may die) at a concentration of an actin polymerization inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to actin polymerization inhibitor","synonyms":[{"name":"sensitive to actin cytoskeleton damaging agent","type":"related"},{"name":"sensitive to actin polymerisation inhibitor","type":"exact"}],"termid":"FYPO:0007868"}


id: FYPO:0006660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable upon exiting G0 phase.","definition_xrefs":["PomBase:mah","PMID:30116786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nitrogen starvation","termid":"FYPO:0001178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability upon G0 to G1 transition","synonyms":[{"name":"loss of mitotic competence upon recovery from G0","type":"exact"},{"name":"loss of mitotic competence upon recovery from cell quiescence","type":"exact"},{"name":"loss of mitotic competence upon recovery from quiescence","type":"exact"},{"name":"loss of viability upon exit from cell quiescence","type":"exact"},{"name":"loss of viability upon exit from quiescence","type":"exact"}],"termid":"FYPO:0006660"}


id: FYPO:0006941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to actin cortical patches for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to actin cortical patch","synonyms":[{"name":"increased duration of protein localisation to actin cortical patch","type":"exact"},{"name":"increased duration of protein localization to F-actin patch","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of protein localization to actin patch","type":"exact"}],"termid":"FYPO:0006941"}


id: PATO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000997 relative viscosity value (obsolete PATO:0000997)","termid":"PATO:0000997"}


id: GO:0050975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of touch","secondary_identifiers":["Wikipedia:Touch"],"synonyms":[{"name":"perception of touch","type":"exact"},{"name":"tactile sense","type":"exact"},{"name":"taction","type":"exact"},{"name":"tactition","type":"exact"}],"termid":"GO:0050975"}


id: PBO:0091302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein","termid":"PBO:0091302"}


id: MONDO:0100278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of plasmalogen biosynthesis in which the cause of the disease is a mutation in the AGXT gene.","definition_xrefs":["PMID:16756494","MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glyoxylate metabolism","termid":"MONDO:0017703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"alanine glyoxylate aminotransferase deficiency","synonyms":[{"name":"AGXT defect","type":"exact"},{"name":"AGXT deficiency","type":"exact"},{"name":"alanine glyoxylate aminotransferase deficiency","type":"exact"}],"termid":"MONDO:0100278","xrefs":{"Monarch":{"xref_id":"0100278"}}}


id: MONDO:0007698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hand-foot-genital syndrome (HFGS) is a very rare multiple congenital abnormality syndrome characterized by distal limb malformations and urogenital defects.","definition_xrefs":["Orphanet:2438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"hand-foot-genital syndrome","secondary_identifiers":["ICD9:759.89","GARD:2594","MedDRA:10072361","MEDGEN:331103","OMIM:140000","DOID:0060739","MESH:C535627","UMLS:C1841679","SCTID:702425002"],"synonyms":[{"name":"HFG","type":"related"},{"name":"HFG syndrome","type":"related"},{"name":"HFGS","type":"exact"},{"name":"HFU syndrome","type":"related"},{"name":"hand foot genital syndrome","type":"related"},{"name":"hand foot uterus syndrome","type":"related"},{"name":"hand-foot-genital syndrome","type":"exact"},{"name":"hand-foot-uterus syndrome","type":"exact"}],"termid":"MONDO:0007698","xrefs":{"Monarch":{"xref_id":"0007698"}}}


id: MONDO:0031009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Glanzmann thrombasthenia","termid":"MONDO:0100326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Glanzmann thrombasthenia 2","secondary_identifiers":["UMLS:C5543273","GARD:16439","OMIM:619267","MEDGEN:1782592"],"synonyms":[{"name":"GT2","type":"exact"},{"name":"Glanzmann thrombasthenia 2","type":"exact"},{"name":"bleeding disorder, platelet-type, 23","type":"exact"}],"termid":"MONDO:0031009","xrefs":{"Monarch":{"xref_id":"0031009"}}}


id: PBO:0085924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; expression induced by low temperature and also by anaerobic conditions; induced during alcoholic fermentation","termid":"PBO:0085924"}


id: PR:Q9UR09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psu1 gene.","definition_xrefs":["UniProtKB:Q9UR09","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase PSU1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.13c","synonyms":[{"name":"Spom972h-psu1","type":"exact"},{"name":"cell wall synthesis protein psu1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR09"}


id: MOD:01630
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks either an  L-glutamine residue or an L-glutamic acid residue with an L-lysine residue by an isopeptide bond to form  N6-(L-isoglutamyl)-L-lysine .","definition_xrefs":["PubMed:2461365","PubMed:5656070","PubMed:8598899","RESID:AA0124","PubMed:5637041","ChEBI:21863","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-isoglutamyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"2-azanyl-6-([4-azanyl-4-carboxybutanoyl]azanyl)hexanoic acid","type":"exact"},{"name":"5-glutamyl N6-lysine","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-lysine","type":"exact"},{"name":"N(epsilon)-(gamma-glutamyl)lysine","type":"exact"},{"name":"N6-(L-isoglutamyl)-L-lysine","type":"exact"}],"termid":"MOD:01630"}


id: PBO:0082190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; involved in detoxification of lignocellulose-derived aldehydes; catalyzes the reduction of furan, aliphatic and aromatic aldehydes using either NADH or NADPH as co-factor; membrane of the quinone oxidoreductase subfamily of the medium-chain dehydrogenase/reductase family; null mutant displays sensitivity to DNA damaging agents; protein abundance increases in response to DNA replication stress","termid":"PBO:0082190"}


id: PBO:0028759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_M_phase","termid":"PBO:0028759"}


id: PBO:0088648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator, RecA family ATPase Rad57/Rhp57","termid":"PBO:0088648"}


id: FYPO:0000680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A developmental process phenotype in which ascus development is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ascus development","termid":"FYPO:0000680"}


id: GO:0033068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of macrolides, any of a large group of polyketide compounds that contain a large lactone ring with few or no double bonds and no nitrogen atoms, linked glycosidically to one or more sugar groups. The macrolides include the carbomycins, the erythromycins, oleandomycin, oligomycins, and the spiramycins, and act as antibiotics, mainly against Gram-positive bacteria.","definition_xrefs":["ISBN:0198506732","PMID:17298179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"macrolide metabolic process","termid":"GO:0033067"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"macrolide biosynthetic process","synonyms":[{"name":"macrolide anabolism","type":"exact"},{"name":"macrolide biosynthesis","type":"exact"},{"name":"macrolide formation","type":"exact"},{"name":"macrolide synthesis","type":"exact"}],"termid":"GO:0033068"}


id: PBO:0079594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene)","termid":"PBO:0079594"}


id: GO:0019768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgE receptor activity","synonyms":[{"name":"high affinity Fc receptor activity","type":"related"},{"name":"high affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019768"}


id: GO:0140446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumigermin, an alpha-pyrone secondary metabolite found in some species of fungi such as Aspergillus fumigatus.","definition_xrefs":["PMID:32083553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fumigermin biosynthetic process","synonyms":[{"name":"fumigermin anabolism","type":"exact"},{"name":"fumigermin biosynthesis","type":"exact"},{"name":"fumigermin formation","type":"exact"},{"name":"fumigermin synthesis","type":"exact"}],"termid":"GO:0140446"}


id: FYPO:0007008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase III is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0006386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal transcription termination","termid":"FYPO:0007463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000294","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal termination of RNA polymerase III transcription","synonyms":[{"name":"normal RNA polymerase III transcription termination","type":"exact"},{"name":"normal termination of RNA polymerase III transcription during mitotic cell cycle","type":"related"},{"name":"normal termination of RNA polymerase III transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007008"}


id: PATO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of a spoon.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/spoon-shaped"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spoon-shaped","termid":"PATO:0002208"}


id: MONDO:0004584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"},{"relation_name":"is_a","term_name":"fungal lung infectious disease","termid":"MONDO:0005766"},{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"maple bark strippers' lung","secondary_identifiers":["UMLS:C0155890","MEDGEN:510126","DOID:8484","ICD10CM:J67.6","ICD9:495.6","SCTID:86638007"],"synonyms":[{"name":"alveolitis due to cryptostroma corticale","type":"exact"},{"name":"maple bark disease","type":"exact"},{"name":"maple bark stripper's disease","type":"exact"},{"name":"maple bark stripper's lung","type":"exact"},{"name":"maple bark-strippers' lung","type":"exact"},{"name":"maple-bark strippers' lung","type":"exact"}],"termid":"MONDO:0004584","xrefs":{"Monarch":{"xref_id":"0004584"}}}


id: PATO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of an organ, tissue or cell due to failure to develop from a primordium or precursor cell.","definition_xrefs":["PATOC:PortlandMeetingFeb2015","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"},{"relation_name":"is_a","term_name":"agenesis","termid":"PATO:0002291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplastic","synonyms":[{"name":"aplasia","type":"exact"},{"name":"undeveloped","type":"exact"}],"termid":"PATO:0001483"}


id: PBO:0031557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_catalytic_activity","termid":"PBO:0031557"}


id: GO:0140636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which copper is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:32979421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"copper import into the mitochondrion","termid":"GO:0140636"}


id: GO:0008648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A family of hormones that stimulate secretion of saliva and cause smooth muscle contraction and vasodilation.","definition_xrefs":["ISBN:0721662544","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete tachykinin (obsolete GO:0008648)","synonyms":[{"name":"tachykinin","type":"exact"}],"termid":"GO:0008648"}


id: PATO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of an physical object that is currently realizing one of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation quality","termid":"PATO:0002353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active","termid":"PATO:0002354"}


id: GO:1903857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","PMID:25535363","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytokinin dehydrogenase activity (obsolete GO:1903857)","synonyms":[{"name":"down regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"down regulation of cytokinin oxidase activity","type":"related"},{"name":"down-regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down-regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"down-regulation of cytokinin oxidase activity","type":"related"},{"name":"downregulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"downregulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"downregulation of cytokinin oxidase activity","type":"related"},{"name":"inhibition of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"inhibition of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of cytokinin dehydrogenase activity","type":"narrow"},{"name":"inhibition of cytokinin oxidase activity","type":"related"},{"name":"negative regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"negative regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903857"}


id: GO:0050357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: atropine + H2O = H+ + tropate + tropine.","definition_xrefs":["EC:3.1.1.10","RHEA:23304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"tropinesterase activity","secondary_identifiers":["MetaCyc:TROPINESTERASE-RXN","KEGG_REACTION:R03563"],"synonyms":[{"name":"atropinase activity","type":"related"},{"name":"atropine acylhydrolase activity","type":"related"},{"name":"atropine esterase activity","type":"related"},{"name":"atropinesterase activity","type":"related"},{"name":"tropine esterase activity","type":"related"}],"termid":"GO:0050357"}


id: PBO:0076453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin","termid":"PBO:0076453"}


id: GO:0000819
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