# terms

id: MONDO:0020136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurodegenerative disease with dementia (obsolete MONDO:0020136)","secondary_identifiers":["Orphanet:98534"],"termid":"MONDO:0020136","xrefs":{"Monarch":{"xref_id":"0020136"}}}


id: GO:0017024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class I myosin; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments.","definition_xrefs":["GOC:bf","PMID:18344022","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myosin I binding","termid":"GO:0017024"}


id: PBO:0076791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon and delta complex 1","termid":"PBO:0076791"}


id: MONDO:0009457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin d level in plasma, low","secondary_identifiers":["OMIM:242890","UMLS:C1855761","MEDGEN:344569"],"synonyms":[{"name":"IMMUNOGLOBULIN D level in plasma, LOW","type":"related"}],"termid":"MONDO:0009457","xrefs":{"Monarch":{"xref_id":"0009457"}}}


id: PBO:0057399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-1","termid":"PBO:0057399"}


id: GO:1990255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a subsynaptic reticulum. A subsynaptic reticulum is an elaborate tubulolamellar membrane system that underlies the postsynaptic cell membrane.","definition_xrefs":["PMID:21041451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subsynaptic reticulum organization","termid":"GO:1990255"}


id: FYPO:0002788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles during vegetative growth","synonyms":[{"name":"decreased vacuole size during vegetative growth","type":"exact"},{"name":"reduced vacuole size during vegetative growth","type":"exact"},{"name":"small vacuoles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002788"}


id: GO:0101004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the cytolytic granule.","definition_xrefs":["PMID:17272266","PMID:21247065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"part_of","term_name":"cytolytic granule","termid":"GO:0044194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"cytolytic granule membrane","termid":"GO:0101004"}


id: PATO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being gathered or tending to gather into a mass or whole.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aggregated","synonyms":[{"name":"clumped","type":"exact"},{"name":"clustered","type":"exact"}],"termid":"PATO:0001629"}


id: GO:0102177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylenelophenol + O2 + NADH + H+ = 4alpha-hydroxymethyl-ergosta-7,24(241)-dien-3beta-ol + NAD + H2O.","definition_xrefs":["RHEA:58872","GOC:pz","PMID:11707264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"24-methylenelophenol methyl oxidase activity","secondary_identifiers":["EC:1.14.18.11","MetaCyc:RXN-11930"],"termid":"GO:0102177"}


id: MONDO:0006549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic polypoid lesion that arises from the anal canal or perianal skin. It is composed of dense fibrous stroma and it is covered by squamous epithelium.","definition_xrefs":["NCIT:C4435"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin tag","termid":"MONDO:0004026"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"},{"relation_name":"is_a","term_name":"anal polyp","termid":"MONDO:0060766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"fibroepithelial polyp of the anus","secondary_identifiers":["MEDGEN:87519","EFO:1000699","SCTID:195469007","DOID:8170","UMLS:C0345903"],"synonyms":[{"name":"anal fibroepithelial polyp","type":"exact"},{"name":"anal fibrous polyp","type":"exact"},{"name":"anal tag","type":"exact"},{"name":"anus skin tag","type":"exact"},{"name":"fibroepithelial polyp of anus","type":"exact"},{"name":"fibrous polyp of anus","type":"exact"},{"name":"fibrous polyp of the anus","type":"exact"},{"name":"skin tag of anus","type":"related"}],"termid":"MONDO:0006549","xrefs":{"Monarch":{"xref_id":"0006549"}}}


id: GO:0003171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrioventricular valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve development","synonyms":[{"name":"AV valve development","type":"exact"}],"termid":"GO:0003171"}


id: PBO:0041935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 3","termid":"PBO:0041935"}


id: PBO:0063667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins GalNAc transferase 4","termid":"PBO:0063667"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: PBO:0071837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 32","termid":"PBO:0071837"}


id: PBO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP4A22 antisense RNA 1","termid":"PBO:0044431"}


id: GO:0031061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of methyl groups to histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone methylation (obsolete GO:0031061)","synonyms":[{"name":"down regulation of histone methylation","type":"exact"},{"name":"down-regulation of histone methylation","type":"exact"},{"name":"downregulation of histone methylation","type":"exact"},{"name":"inhibition of histone methylation","type":"narrow"}],"termid":"GO:0031061"}


id: PR:Q8X1T0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A desumoylating isopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSI-like protein sdu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.06","secondary_identifiers":["UniProtKB:Q8X1T0"],"synonyms":[{"name":"Spom972h-DESI2","type":"exact"},{"name":"meiotically up-regulated gene 67 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8X1T0"}


id: PBO:0050708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 6","termid":"PBO:0050708"}


id: MONDO:0004308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sarcoma arising from the meninges.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"malignant tumor of meninges","termid":"MONDO:0021322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"meningeal sarcoma","secondary_identifiers":["MEDGEN:90148","NCIT:C4073","DOID:7614","UMLS:C0302327"],"synonyms":[{"name":"meningeal cluster sarcoma","type":"exact"},{"name":"meningeal sarcoma","type":"exact"},{"name":"meninges sarcoma","type":"exact"},{"name":"sarcoma of meningeal cluster","type":"exact"},{"name":"sarcoma of meninges","type":"exact"},{"name":"sarcoma of the meninges","type":"exact"}],"termid":"MONDO:0004308","xrefs":{"Monarch":{"xref_id":"0004308"}}}


id: GO:0060239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of signal transduction involved in conjugation with cellular fusion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"positively_regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060239"}


id: PBO:0033821
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of Rad Wee1","termid":"PBO:0033821"}


id: GO:0009694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving jasmonic acid, a fatty acid derivative with the formula (1R-(1 alpha, 2 beta(Z)))-3-oxo-2-(2-pentenyl)cyclopentaneacetic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"jasmonic acid metabolic process","synonyms":[{"name":"jasmonic acid metabolism","type":"exact"}],"termid":"GO:0009694"}


id: FYPO:0004190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to ionizing radiation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to ionizing radiation","synonyms":[{"name":"decreased protein accumulation during cellular response to ionizing radiation","type":"related"},{"name":"decreased protein level during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004190"}


id: MONDO:0958071
data:
  {"annotated_genes":["SJAG_00573","SJAG_03686"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87540,87541],"is_not":false,"summary":null,"term":"MONDO:0958071"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hao-Fountain syndrome","termid":"MONDO:0014805"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome due to USP7 mutation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5816734","MEDGEN:1853151","OMIM:616863","Orphanet:643538"],"synonyms":[{"name":"USP7-related neurodevelopmental disorder","type":"exact"}],"termid":"MONDO:0958071","terms_by_termid":{"MONDO:0958071":null},"xrefs":{"Monarch":{"xref_id":"0958071"}}}


id: PBO:0028313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_ncRNA_genes","termid":"PBO:0028313"}


id: GO:0042753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a circadian rhythm behavior.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian rhythm","synonyms":[{"name":"activation of circadian rhythm","type":"narrow"},{"name":"stimulation of circadian rhythm","type":"narrow"},{"name":"up regulation of circadian rhythm","type":"exact"},{"name":"up-regulation of circadian rhythm","type":"exact"},{"name":"upregulation of circadian rhythm","type":"exact"}],"termid":"GO:0042753"}


id: PBO:0034053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-skeleton_of","termid":"PBO:0034053"}


id: GO:0035013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the peptide myosuppressin to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"myosuppressin receptor activity","termid":"GO:0035013"}


id: PBO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase activator 1","termid":"PBO:0061275"}


id: GO:0050050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-leucine + acetyl-CoA = N-acetyl-L-leucine + CoA + H+.","definition_xrefs":["RHEA:20089","EC:2.3.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-leucine N-acetyltransferase activity","secondary_identifiers":["MetaCyc:LEUCINE-N-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R01089"],"synonyms":[{"name":"acetyl-CoA:L-leucine N-acetyltransferase activity","type":"related"},{"name":"leucine acetyltransferase activity","type":"related"}],"termid":"GO:0050050"}


id: GO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a sweet taste stimulus to be received and converted to a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of sweet taste","synonyms":[{"name":"perception of sweet taste, detection of chemical stimulus","type":"exact"},{"name":"perception of sweet taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of sweet taste","type":"exact"},{"name":"sensory detection of sweet taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of sweet taste","type":"exact"},{"name":"sensory transduction of sweet taste","type":"exact"},{"name":"sweet taste detection","type":"exact"}],"termid":"GO:0001582"}


id: GO:0018962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-phenylpropionate, the anion of phenylpropanoic acid. It is produced from putrefaction of proteins in soil or breakdown of several constituents of plants, such as lignin, various oils and resins.","definition_xrefs":["GOC:ai","UM-BBD_pathwayID:ppa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-phenylpropionate metabolic process","synonyms":[{"name":"3-phenylpropionate metabolism","type":"exact"},{"name":"hydrocinnamic acid metabolic process","type":"exact"},{"name":"hydrocinnamic acid metabolism","type":"exact"},{"name":"phenylpropanoate metabolic process","type":"exact"},{"name":"phenylpropanoate metabolism","type":"exact"}],"termid":"GO:0018962"}


id: PBO:0049704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidyl-tRNA synthetase 1","termid":"PBO:0049704"}


id: PR:O94542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pxd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1322.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.02","synonyms":[{"name":"Spom972h-pxd1","type":"exact"}],"termid":"PR:O94542"}


id: GO:0085026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, symbiont-induced host-derived organelle that is comprised of multiple protein and lipid domains.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"extracellular membraneless organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"tubovesicular membrane network","synonyms":[{"name":"TVM network","type":"exact"},{"name":"TVN","type":"exact"}],"termid":"GO:0085026"}


id: GO:0004655
data:
  {"annotated_genes":["SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73318],"is_not":false,"summary":null,"term":"GO:0004655"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 5-aminolevulinate = 2 H2O + H+ + porphobilinogen.","definition_xrefs":["EC:4.2.1.24","RHEA:24064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"porphobilinogen synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PORPHOBILSYNTH-RXN","KEGG_REACTION:R00036","Reactome:R-HSA-189439"],"synonyms":[{"name":"5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing)","type":"related"},{"name":"5-aminolevulinate hydro-lyase (adding 5-aminolevulinate and cyclizing; porphobilinogen-forming)","type":"related"},{"name":"5-levulinic acid dehydratase activity","type":"related"},{"name":"aminolevulinate dehydratase activity","type":"exact"},{"name":"aminolevulinic dehydratase activity","type":"related"},{"name":"delta-aminolevulinate dehydratase activity","type":"related"},{"name":"delta-aminolevulinic acid dehydrase activity","type":"related"},{"name":"delta-aminolevulinic acid dehydratase activity","type":"exact"},{"name":"delta-aminolevulinic dehydratase activity","type":"related"}],"termid":"GO:0004655","terms_by_termid":{"GO:0004655":null}}


id: MONDO:0003071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidermolysis bullosa simplex (obsolete MONDO:0003071)","termid":"MONDO:0003071","xrefs":{"Monarch":{"xref_id":"0003071"}}}


id: PBO:0067758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 57","termid":"PBO:0067758"}


id: PBO:0075071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 121A","termid":"PBO:0075071"}


id: PBO:0091435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha/Beta hydrolase fold, DUF1749 family protein","termid":"PBO:0091435"}


id: PBO:0063856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P38 inhibited cutaneous squamous cell carcinoma associated lincRNA","termid":"PBO:0063856"}


id: PBO:0070002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1298, pseudogene","termid":"PBO:0070002"}


id: PBO:0063980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 14","termid":"PBO:0063980"}


id: MOD:02035
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(6) HexNAc(3)","definition_xrefs":["PubMed:33135055","Unimod:1509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex1Hex6HexNAc3 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(6) HexNAc(3)","type":"related"}],"termid":"MOD:02035"}


id: GO:0005143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-12 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-12 receptor binding","synonyms":[{"name":"IL-12","type":"narrow"},{"name":"interleukin-12 receptor ligand","type":"narrow"}],"termid":"GO:0005143"}


id: PBO:0065042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 7","termid":"PBO:0065042"}


id: GO:0042750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy in which to pass the winter. It is characterized by narcosis and by sharp reduction in body temperature and metabolic activity and by a depression of vital signs.","definition_xrefs":["PMID:1945046","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hibernation","secondary_identifiers":["Wikipedia:Hibernation"],"termid":"GO:0042750"}


id: GO:1902550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any lymphoid lineage cell migration into thymus that is involved in thymus epithelium morphogenesis.","definition_xrefs":["GOC:cvs","PMID:22342843","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid lineage cell migration into thymus","termid":"GO:0097535"},{"relation_name":"part_of","term_name":"thymus epithelium morphogenesis","termid":"GO:0097536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphoid lineage cell migration into thymus involved in thymus epithelium morphogenesis","synonyms":[{"name":"lymphoid lineage cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymic epithelium morphogenesis","type":"exact"},{"name":"lymphoid lineage restricted progenitor cell migration into thymus involved in thymus epithelium morphogenesis","type":"exact"}],"termid":"GO:1902550"}


id: PBO:0029137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cordycepin","termid":"PBO:0029137"}


id: PBO:0036335
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DLP1 AND DPS1","termid":"PBO:0036335"}


id: PBO:0005256
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.7","termid":"PBO:0005256"}


id: PBO:0071930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 7","termid":"PBO:0071930"}


id: GO:0080013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranyl-geranyl diphosphate + H2O = (E,E)-geranyllinalool + diphosphate.","definition_xrefs":["PMID:18398052","MetaCyc:RXN-10441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(E,E)-geranyllinalool synthase activity","secondary_identifiers":["RHEA:38155"],"termid":"GO:0080013"}


id: PBO:0083714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein that plays a central role in ERAD; forms HRD complex with Hrd1p and ER-associated protein degradation (ERAD) determinants that engages in lumen to cytosol communication and coordination of ERAD events","termid":"PBO:0083714"}


id: PBO:0042338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD70 molecule","termid":"PBO:0042338"}


id: PBO:0056212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B6B","termid":"PBO:0056212"}


id: MONDO:0056803
data:
  {"annotated_genes":["SJAG_03290","SJAG_03712","SJAG_04459","SJAG_01466","SJAG_03641","SJAG_01995","SJAG_00988","SJAG_01417","SJAG_01351","SJAG_01164","SJAG_03556","SJAG_02007","SJAG_02895","SJAG_03316","SJAG_00582","SJAG_04042","SJAG_03659","SJAG_01199","SJAG_03671","SJAG_03222","SJAG_04016","SJAG_01162","SJAG_02397","SJAG_04425","SJAG_01147","SJAG_01070","SJAG_01612","SJAG_01216","SJAG_03553","SJAG_03069","SJAG_02306","SJAG_03701","SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009825"},{"annotations":[87368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009058"},{"annotations":[88777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[87968,87969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009285"},{"annotations":[87643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[87516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[87953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[88615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[88020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87007,87006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[88668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013404"},{"annotations":[88392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[87178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[87707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009607"},{"annotations":[86983,86984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[88601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0975806"},{"annotations":[87406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[87763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[87027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[87093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[87736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[88087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[88756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971174"},{"annotations":[86946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[87535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"},{"annotations":[86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009593"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of sulfur compound metabolic process.","definition_xrefs":["MONDO:patterns/disrupts_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineral metabolism 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disease","type":"exact"}],"termid":"MONDO:0056803","terms_by_termid":{"MONDO:0009058":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009285":null,"MONDO:0009352":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009529":null,"MONDO:0009593":null,"MONDO:0009607":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0009825":null,"MONDO:0009947":null,"MONDO:0010184":null,"MONDO:0011582":null,"MONDO:0013404":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0014132":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0019531":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0100255":null,"MONDO:0957382":null,"MONDO:0971174":null,"MONDO:0975806":null},"xrefs":{"Monarch":{"xref_id":"0056803"}}}


id: PBO:0041175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 1 member A1 pseudogene 1","termid":"PBO:0041175"}


id: SO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"12 or 23 nucleotide spacer between the 5' D-heptamer (SO:0000496) and 5' D-nonamer (SO:0000497) of a 5' D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_spacer","synonyms":[{"name":"5'-SPACER","type":"exact"},{"name":"five prime D spacer","type":"exact"},{"name":"five prime D-spacer","type":"exact"}],"termid":"SO:0000498"}


id: GO:1904004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sebum secreting cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:hjd","GO_REF:0000058","PMID:16901790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of sebum secreting cell proliferation","termid":"GO:1904002"},{"relation_name":"positively_regulates","term_name":"sebum secreting cell proliferation","termid":"GO:1990654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sebum secreting cell proliferation","synonyms":[{"name":"activation of sebocyte proliferation","type":"related"},{"name":"activation of sebum secreting cell proliferation","type":"narrow"},{"name":"positive regulation of sebocyte proliferation","type":"related"},{"name":"up regulation of sebocyte proliferation","type":"related"},{"name":"up regulation of sebum secreting cell proliferation","type":"exact"},{"name":"up-regulation of sebocyte proliferation","type":"related"},{"name":"up-regulation of sebum secreting cell proliferation","type":"exact"},{"name":"upregulation of sebocyte proliferation","type":"related"},{"name":"upregulation of sebum secreting cell proliferation","type":"exact"}],"termid":"GO:1904004"}


id: PBO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phenotype_of","termid":"PBO:0034323"}


id: MONDO:0010788
data:
  {"annotated_genes":["SJAG_MIT15","SJAG_MIT03","SJAG_MIT13"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87281,87282,87283],"is_not":false,"summary":null,"term":"MONDO:0010788"}]},"cv_name":"mondo","definition":"Leber's hereditary optic neuropathy (LHON) is a mitochondrial neurodegenerative disease affecting the optic nerve and often characterized by sudden vision loss in young adult carriers.","definition_xrefs":["Orphanet:104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0005559","MONDO:0004069","MONDO:0005267"],"is_obsolete":false,"name":"Leber hereditary optic neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200940","NCIT:C84808","NORD:1352","OMIM:535000","UMLS:C0917796","SCTID:58610003","MESH:D029242","DOID:705","icd11.foundation:1018428959","GARD:6870","MEDGEN:182973","NANDO:1200178"],"synonyms":[{"name":"LHON","type":"exact"},{"name":"Leber Hereditary optic atrophy","type":"exact"},{"name":"Leber hereditary optic neuropathy","type":"exact"},{"name":"Leber optic atrophy","type":"exact"},{"name":"Leber's hereditary optic neuropathy","type":"exact"},{"name":"Leber's optic atrophy","type":"exact"},{"name":"Leber’s disease","type":"related"},{"name":"optic atrophy, Leber type","type":"related"}],"termid":"MONDO:0010788","terms_by_termid":{"MONDO:0010788":null},"xrefs":{"Monarch":{"xref_id":"0010788"}}}


id: PBO:0087736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; binds single-stranded DNA and has ATPase activity; supports nucleolar function; S. pombe homolog forms a heterodimer with S. pombe Rad18p that is involved in DNA repair","termid":"PBO:0087736"}


id: PBO:0081141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP41 zinc finger protein","termid":"PBO:0081141"}


id: PATO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000526 absolute drug sensitivity value (obsolete PATO:0000526)","termid":"PATO:0000526"}


id: MONDO:0011724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucose transporter type 1 (GLUT1) deficiency syndrome is characterized by an encephalopathy marked by childhood epilepsy that is refractory to treatment, deceleration of cranial growth leading to microcephaly, psychomotor retardation, spasticity, ataxia, dysarthria and other paroxysmal neurological phenomena often occurring before meals. Symptoms appear between the age of 1 and 4 months, following a normal birth and gestation.","definition_xrefs":["Orphanet:71277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GLUT1 deficiency syndrome","termid":"MONDO:0000188"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005027"],"is_obsolete":false,"name":"encephalopathy due to GLUT1 deficiency","secondary_identifiers":["NANDO:1200799","OMIM:606777","NANDO:2200545","MESH:C536830","GARD:9265","MEDGEN:1645412","NORD:1188","DOID:0070561","icd11.foundation:1231079185","UMLS:C4551966"],"synonyms":[{"name":"De Vivo disease","type":"exact"},{"name":"G1D","type":"related"},{"name":"GLUT1 DS","type":"related"},{"name":"GLUT1 deficiency syndrome","type":"related"},{"name":"GLUT1 deficiency syndrome 1","type":"related"},{"name":"GLUT1 deficiency syndrome 1, autosomal recessive","type":"related"},{"name":"GLUT1 deficiency syndrome 1, infantile onset, severe","type":"exact"},{"name":"GLUT1 deficiency syndrome type 1","type":"exact"},{"name":"GLUT1-DS","type":"exact"},{"name":"GLUT1DS1","type":"related"},{"name":"Glucose Transporter Type 1 Deficiency Syndrome","type":"exact"},{"name":"encephalopathy due to GLUT1 deficiency","type":"exact"},{"name":"glucose TRANSPORT defect, blood-brain barrier GLUT1 deficiency syndrome 1, autosomal recessive, included","type":"related"},{"name":"glucose Transport defect, blood-brain barrier","type":"related"},{"name":"glucose transport defect, blood-brain barrier","type":"related"},{"name":"glucose transporter Protein syndrome","type":"related"},{"name":"glucose transporter protein syndrome","type":"related"},{"name":"glucose transporter type 1 deficiency","type":"exact"},{"name":"glucose transporter type 1 deficiency syndrome","type":"related"},{"name":"glucose transporter type1 (glut-1) deficiency","type":"related"},{"name":"glut-1 deficiency syndrome","type":"exact"}],"termid":"MONDO:0011724","xrefs":{"Monarch":{"xref_id":"0011724"}}}


id: PBO:0089259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 GTPase complex scaffold subunit Scd2","termid":"PBO:0089259"}


id: GO:0090314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"positive regulation of protein targeting to membrane","termid":"GO:0090314"}


id: MONDO:0013170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A autosomal recessive cutis laxa type I that has material basis in homozygous or compound heterozygous mutation in the LTBP4 gene on chromosome 19q13","definition_xrefs":["DOID:0070139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cutis laxa with severe pulmonary, gastrointestinal and urinary anomalies","secondary_identifiers":["OMIM:613177","Orphanet:221145","PMID:19836010","MESH:C567716","UMLS:C2750804","icd11.foundation:424903269","GARD:17140","MEDGEN:442566"],"synonyms":[{"name":"ARCL1C","type":"exact"},{"name":"Urban-Rifkin-Davis syndrome","type":"exact"},{"name":"autosomal recessive cutis laxa type 1C","type":"exact"},{"name":"autosomal recessive cutis laxa type IC","type":"related"},{"name":"cutis laxa with Severe pulmonary, gastrointestinal, and urinary abnormalities","type":"related"},{"name":"cutis laxa, autosomal recessive, type 1C","type":"related"},{"name":"cutis laxa, autosomal recessive, type IC","type":"related"}],"termid":"MONDO:0013170","xrefs":{"Monarch":{"xref_id":"0013170"}}}


id: PBO:0028348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028348"}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism (obsolete GO:0044520)","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: PBO:0065397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 2 pseudogene 3","termid":"PBO:0065397"}


id: MONDO:0958095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Nodal T-follicular helper cell lymphoma, follicular type","secondary_identifiers":["NCIT:C80375","Orphanet:652650","MEDGEN:398050","UMLS:C2700204"],"termid":"MONDO:0958095","xrefs":{"Monarch":{"xref_id":"0958095"}}}


id: PBO:0017577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Sos7","termid":"PBO:0017577"}


id: PATO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000231 reflex (obsolete PATO:0000231)","termid":"PATO:0000231"}


id: PBO:0072249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 24","termid":"PBO:0072249"}


id: GO:0097756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of blood vessel diameter (obsolete GO:0097756)","synonyms":[{"name":"negative regulation of vasodilation","type":"related"}],"termid":"GO:0097756"}


id: GO:0097474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina.","definition_xrefs":["GOC:jc","CL:0000573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"},{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell apoptotic process","synonyms":[{"name":"cone photoreceptor apoptotic process","type":"exact"}],"termid":"GO:0097474"}


id: PBO:0082201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 1,2-mannosyltransferase; involved in glycosyl phosphatidyl inositol (GPI) biosynthesis; required for addition of the fourth, side branching mannose to the GPI core structure","termid":"PBO:0082201"}


id: PR:Q9USP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmn1 gene.","definition_xrefs":["UniProtKB:Q9USP9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C902.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.04","synonyms":[{"name":"Spom972h-rmn1","type":"exact"}],"termid":"PR:Q9USP9"}


id: PBO:0058675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6803","termid":"PBO:0058675"}


id: PATO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distribution which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"distributed","termid":"PATO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased distribution","synonyms":[{"name":"low distribution","type":"exact"}],"termid":"PATO:0001672"}


id: GO:0033133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hexokinase activity","termid":"GO:1903301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucokinase activity","synonyms":[{"name":"glucokinase activator","type":"narrow"},{"name":"stimulation of glucokinase activity","type":"narrow"},{"name":"up regulation of glucokinase activity","type":"exact"},{"name":"up-regulation of glucokinase activity","type":"exact"},{"name":"upregulation of glucokinase activity","type":"exact"}],"termid":"GO:0033133"}


id: GO:0071605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of monocyte chemotactic protein-1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"monocyte chemotactic protein-1 production","synonyms":[{"name":"CCL2 production","type":"exact"},{"name":"MCP-1 production","type":"exact"}],"termid":"GO:0071605"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:aruk","GOC:sart","PMID:20080302","GOC:dph","PMID:30280653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: PBO:0049453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 7","termid":"PBO:0049453"}


id: GO:0004806
data:
  {"annotated_genes":["SJAG_01036","SJAG_02907","SJAG_02487","SJAG_02089","SJAG_03604","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58490,60226,71432,73169,95698,100250],"is_not":false,"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a triacylglycerol + H2O = a diacylglycerol + a fatty acid + H+.","definition_xrefs":["RHEA:12044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02907":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"triacylglycerol lipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482777","Reactome:R-HSA-163551","Reactome:R-HSA-5694109","MetaCyc:RXN-19278","Reactome:R-HSA-8848338","Reactome:R-HSA-8848339","EC:3.1.1.3"],"synonyms":[{"name":"GA 56","type":"related"},{"name":"GEH","type":"related"},{"name":"PPL","type":"related"},{"name":"TAG activity","type":"exact"},{"name":"amano AP","type":"related"},{"name":"amano B","type":"related"},{"name":"amano CE","type":"related"},{"name":"amano CES","type":"related"},{"name":"amano P","type":"related"},{"name":"amno N-AP","type":"related"},{"name":"butyrinase activity","type":"related"},{"name":"cacordase activity","type":"related"},{"name":"capalase L","type":"related"},{"name":"glycerol ester hydrolase activity","type":"related"},{"name":"glycerol-ester hydrolase activity","type":"related"},{"name":"heparin releasable hepatic lipase","type":"narrow"},{"name":"hepatic lipase","type":"narrow"},{"name":"hepatic monoacylglycerol acyltransferase","type":"narrow"},{"name":"lipazin","type":"related"},{"name":"liver lipase","type":"narrow"},{"name":"meito MY 30","type":"related"},{"name":"meito sangyo OF lipase","type":"related"},{"name":"post-heparin plasma protamine-resistant lipase","type":"narrow"},{"name":"salt-resistant post-heparin lipase","type":"narrow"},{"name":"steapsin","type":"related"},{"name":"takedo 1969-4-9","type":"related"},{"name":"triacetinase activity","type":"related"},{"name":"triacylglycerol acylhydrolase activity","type":"related"},{"name":"triacylglycerol ester hydrolase activity","type":"related"},{"name":"tributyrase activity","type":"related"},{"name":"tributyrin esterase activity","type":"related"},{"name":"tributyrinase activity","type":"related"},{"name":"triglyceridase activity","type":"related"},{"name":"triglyceride hydrolase activity","type":"related"},{"name":"triglyceride lipase activity","type":"exact"},{"name":"triolein hydrolase activity","type":"related"},{"name":"tween hydrolase activity","type":"related"},{"name":"tween-hydrolyzing esterase activity","type":"related"},{"name":"tweenase activity","type":"related"},{"name":"tweenesterase activity","type":"related"}],"termid":"GO:0004806","terms_by_termid":{"GO:0004806":null}}


id: CHEBI:192760
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of cyclohexanol.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mochimganine","termid":"CHEBI:192760"}


id: FYPO:0003064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"}


id: FYPO:0004373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is abnormal. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0007095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abnormal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abnormal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004373"}


id: GO:2000451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell extravasation","termid":"GO:2000409"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"}


id: PBO:0076312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 2 binding protein","termid":"PBO:0076312"}


id: GO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + ATP = ADP + dAMP + 2 H+.","definition_xrefs":["RHEA:23452","EC:2.7.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"deoxyadenosine kinase activity","secondary_identifiers":["KEGG_REACTION:R02089","MetaCyc:DEOXYADENOSINE-KINASE-RXN"],"synonyms":[{"name":"ATP:deoxyadenosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyadenosine kinase (phosphorylating)","type":"related"},{"name":"purine-deoxyribonucleoside kinase activity","type":"related"}],"termid":"GO:0004136"}


id: GO:0003778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete dynactin motor (obsolete GO:0003778)","synonyms":[{"name":"dynactin motor","type":"exact"}],"termid":"GO:0003778"}


id: PBO:0079352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB antisense RNA 1","termid":"PBO:0079352"}


id: GO:0009660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an amyloplast. An amyloplast is a plastid whose main function is to synthesize and store starch.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloplast organization","synonyms":[{"name":"amyloplast organisation","type":"exact"},{"name":"amyloplast organization and biogenesis","type":"related"}],"termid":"GO:0009660"}


id: PBO:0058639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-1","termid":"PBO:0058639"}


id: PBO:0004751
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia","termid":"PBO:0004751"}


id: GO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts the activity of a calcium channel in another organism via the action of a venom.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of calcium channel activity","termid":"GO:0044472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated inhibition of calcium channel activity","synonyms":[{"name":"envenomation resulting in negative regulation of calcium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044473"}


id: PBO:0078637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 11","termid":"PBO:0078637"}


id: GO:0051347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transferase activity","synonyms":[{"name":"activation of transferase activity","type":"narrow"},{"name":"stimulation of transferase activity","type":"narrow"},{"name":"transferase activator","type":"exact"},{"name":"up regulation of transferase activity","type":"exact"},{"name":"up-regulation of transferase activity","type":"exact"},{"name":"upregulation of transferase activity","type":"exact"}],"termid":"GO:0051347"}


id: GO:0102819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: bixin aldehyde + O2 + NAD = norbixin + NADH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete bixin aldehyde dehydrogenase activity (obsolete GO:0102819)","termid":"GO:0102819"}


id: MONDO:0005426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infarct detected by MRI and not determined to be clinically significant","definition_xrefs":["EFO:0004715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain infarction","termid":"MONDO:0005394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRI defined brain infarct","termid":"MONDO:0005426","xrefs":{"Monarch":{"xref_id":"0005426"}}}


id: GO:1900558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving austinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol metabolic process","synonyms":[{"name":"austinol metabolism","type":"exact"}],"termid":"GO:1900558"}


id: PBO:0067179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 237, pseudogene","termid":"PBO:0067179"}


id: GO:0033439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"ACA codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033439"}


id: PBO:0043163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector c","termid":"PBO:0043163"}


id: MONDO:0971152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 125","secondary_identifiers":["UMLS:C5935633","OMIM:620877","MEDGEN:1861028"],"synonyms":[{"name":"deafness, autosomal recessive 125","type":"narrow"}],"termid":"MONDO:0971152","xrefs":{"Monarch":{"xref_id":"0971152"}}}


id: PBO:0108777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0108777"}


id: MONDO:0024316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysfunction in biological function that is due to a psychological process.","definition_xrefs":["NCIT:C35186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatoform disorder","termid":"MONDO:0003117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physiological malfunction arising from mental factor","secondary_identifiers":["UMLS:C0154548","MEDGEN:102310"],"synonyms":[{"name":"physiological malfunction arising from mental Factor","type":"exact"}],"termid":"MONDO:0024316","xrefs":{"Monarch":{"xref_id":"0024316"}}}


id: PBO:0024817
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CHS1, CHS2, CHS3 triple mutant","termid":"PBO:0024817"}


id: MONDO:0014940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset","secondary_identifiers":["UMLS:C4310693","MEDGEN:934660","DOID:0081364","OMIM:617145"],"synonyms":[{"name":"NADGP","type":"exact"},{"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset","type":"exact"},{"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset; NADGP","type":"exact"}],"termid":"MONDO:0014940","xrefs":{"Monarch":{"xref_id":"0014940"}}}


id: PBO:0054462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1859","termid":"PBO:0054462"}


id: PBO:0026666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_cell","termid":"PBO:0026666"}


id: PR:O74869
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nic1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity nickel transport protein nic1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1884.02","synonyms":[{"name":"Spom972h-nic1","type":"exact"}],"termid":"PR:O74869"}


id: GO:0005507
data:
  {"annotated_genes":["SJAG_00802","SJAG_01140","SJAG_00668","SJAG_MIT04","SJAG_MIT20","SJAG_01996","SJAG_00449","SJAG_04553","SJAG_04677","SJAG_01694","SJAG_02399","SJAG_05398","SJAG_03322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60643,62051,67685,70210,75894,76727,79521,79732,108675,116878,118903,120899,120950],"is_not":false,"summary":null,"term":"GO:0005507"}]},"cv_name":"molecular_function","definition":"Binding to a copper (Cu) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_00668":null,"SJAG_00802":null,"SJAG_01140":null,"SJAG_01694":null,"SJAG_01996":null,"SJAG_02399":null,"SJAG_03322":null,"SJAG_04553":null,"SJAG_04677":null,"SJAG_05398":null,"SJAG_MIT04":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"copper ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"copper binding","type":"exact"},{"name":"copper/cadmium binding","type":"broad"}],"termid":"GO:0005507","terms_by_termid":{"GO:0005507":null}}


id: FYPO:0000840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level","synonyms":[{"name":"RNA accumulation: normal","type":"related"},{"name":"normal cellular RNA level","type":"exact"},{"name":"normal mRNA level","type":"narrow"},{"name":"normal transcript level","type":"exact"}],"termid":"FYPO:0000840"}


id: GO:0042299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = lupeol. This reaction is the cyclization of (S)-2,3-epoxysqualene (2,3-oxidosqualene) to lupeol.","definition_xrefs":["PMID:9883589","MetaCyc:RXN-111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"lupeol synthase activity","secondary_identifiers":["EC:5.4.99.41","RHEA:31383"],"synonyms":[{"name":"oxidosqualene:lupeol cyclase activity","type":"exact"}],"termid":"GO:0042299"}


id: PBO:0073574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 2","termid":"PBO:0073574"}


id: PBO:0048060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 9","termid":"PBO:0048060"}


id: MOD:01340
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:11085420","Unimod:91#K","PubMed:11078590","PubMed:11821862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESP-Tag heavy d10","termid":"MOD:00469"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESP-Tag heavy d10 - site K","synonyms":[{"name":"ESP-Tag heavy d10","type":"related"},{"name":"ESP:2H(10)","type":"related"}],"termid":"MOD:01340"}


id: GO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactarate, the anion of galactaric acid.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"},{"relation_name":"is_a","term_name":"galactarate metabolic process","termid":"GO:0019580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactarate catabolic process","secondary_identifiers":["GO:0019582","MetaCyc:GALACTARDEG-PWY"],"synonyms":[{"name":"D-galactarate breakdown","type":"related"},{"name":"D-galactarate catabolic process","type":"related"},{"name":"D-galactarate catabolism","type":"related"},{"name":"D-galactarate degradation","type":"related"},{"name":"galactarate breakdown","type":"exact"},{"name":"galactarate catabolism","type":"exact"},{"name":"galactarate degradation","type":"exact"}],"termid":"GO:0046392"}


id: PBO:0027987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_enlarged_around_nucleus","termid":"PBO:0027987"}


id: PBO:0045265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNL-type zinc finger","termid":"PBO:0045265"}


id: PBO:0028174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_double-strand_break_repair_during_vegetative_growth","termid":"PBO:0028174"}


id: GO:1904077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24530842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"regulation of estrogen biosynthetic process","termid":"GO:1904076"},{"relation_name":"negatively_regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of estrogen biosynthetic process","synonyms":[{"name":"down regulation of estrogen anabolism","type":"exact"},{"name":"down regulation of estrogen biosynthesis","type":"exact"},{"name":"down regulation of estrogen biosynthetic process","type":"exact"},{"name":"down regulation of estrogen formation","type":"exact"},{"name":"down regulation of estrogen synthesis","type":"exact"},{"name":"down regulation of oestrogen biosynthesis","type":"exact"},{"name":"down regulation of oestrogen biosynthetic process","type":"exact"},{"name":"down-regulation of estrogen anabolism","type":"exact"},{"name":"down-regulation of estrogen biosynthesis","type":"exact"},{"name":"down-regulation of estrogen biosynthetic process","type":"exact"},{"name":"down-regulation of estrogen formation","type":"exact"},{"name":"down-regulation of estrogen synthesis","type":"exact"},{"name":"down-regulation of oestrogen biosynthesis","type":"exact"},{"name":"down-regulation of oestrogen biosynthetic process","type":"exact"},{"name":"downregulation of estrogen anabolism","type":"exact"},{"name":"downregulation of estrogen biosynthesis","type":"exact"},{"name":"downregulation of estrogen biosynthetic process","type":"exact"},{"name":"downregulation of estrogen formation","type":"exact"},{"name":"downregulation of estrogen synthesis","type":"exact"},{"name":"downregulation of oestrogen biosynthesis","type":"exact"},{"name":"downregulation of oestrogen biosynthetic process","type":"exact"},{"name":"inhibition of estrogen anabolism","type":"narrow"},{"name":"inhibition of estrogen biosynthesis","type":"narrow"},{"name":"inhibition of estrogen biosynthetic process","type":"narrow"},{"name":"inhibition of estrogen formation","type":"narrow"},{"name":"inhibition of estrogen synthesis","type":"narrow"},{"name":"inhibition of oestrogen biosynthesis","type":"narrow"},{"name":"inhibition of oestrogen biosynthetic process","type":"narrow"},{"name":"negative regulation of estrogen anabolism","type":"exact"},{"name":"negative regulation of estrogen biosynthesis","type":"exact"},{"name":"negative regulation of estrogen formation","type":"exact"},{"name":"negative regulation of estrogen synthesis","type":"exact"},{"name":"negative regulation of oestrogen biosynthesis","type":"exact"},{"name":"negative regulation of oestrogen biosynthetic process","type":"exact"}],"termid":"GO:1904077"}


id: PBO:0047076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member E, pseudogene","termid":"PBO:0047076"}


id: GO:0010960
data:
  {"annotated_genes":["SJAG_03516","SJAG_04111","SJAG_02578"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57642],"is_not":false,"summary":null,"term":"GO:0010960"},{"annotations":[71982,76172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of magnesium ions within an organism or cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"magnesium ion homeostasis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0010960","terms_by_termid":{"GO:0010960":null,"GO:0010961":null}}


id: MONDO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the lacrimal apparatus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal system cancer","secondary_identifiers":["MEDGEN:272790","NCIT:C5102","UMLS:C1334361","SCTID:416510003","DOID:292"],"synonyms":[{"name":"cancer of lacrimal apparatus","type":"exact"},{"name":"lacrimal apparatus cancer","type":"exact"},{"name":"lacrimal system neoplasm","type":"exact"},{"name":"lacrimal system neoplasms","type":"exact"},{"name":"lacrimal system tumor","type":"exact"},{"name":"lacrimal system tumour","type":"exact"},{"name":"malignant lacrimal apparatus neoplasm","type":"exact"},{"name":"malignant neoplasm of lacrimal apparatus","type":"exact"},{"name":"neoplasm of lacrimal system","type":"exact"},{"name":"neoplasm of the lacrimal system","type":"exact"},{"name":"tumor of lacrimal system","type":"exact"},{"name":"tumor of the lacrimal system","type":"exact"},{"name":"tumour of lacrimal system","type":"exact"},{"name":"tumour of the lacrimal system","type":"exact"}],"termid":"MONDO:0002460","xrefs":{"Monarch":{"xref_id":"0002460"}}}


id: PBO:0070225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 159 pseudogene","termid":"PBO:0070225"}


id: MONDO:0024663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant dermis tumor","termid":"MONDO:0003363"},{"relation_name":"is_a","term_name":"skin meningioma","termid":"MONDO:0004429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"primary skin meningioma","secondary_identifiers":["NCIT:C5277","UMLS:C1335481","MEDGEN:235494"],"synonyms":[{"name":"primary cutaneous meningioma","type":"exact"},{"name":"primary meningioma of skin","type":"exact"},{"name":"primary meningioma of the skin","type":"exact"},{"name":"primary skin meningioma","type":"exact"}],"termid":"MONDO:0024663","xrefs":{"Monarch":{"xref_id":"0024663"}}}


id: FYPO:0006330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0061817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased endoplasmic reticulum-plasma membrane tethering","synonyms":[{"name":"abnormal ER-PM contact formation","type":"related"},{"name":"decreased ER-PM tethering","type":"exact"},{"name":"decreased ER-plasma membrane tethering","type":"exact"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during mitotic cell cycle","type":"related"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during vegetative growth","type":"exact"},{"name":"increased ER-PM contact removal","type":"related"},{"name":"increased ER-PM uncoupling","type":"related"},{"name":"reduced endoplasmic reticulum-plasma membrane tethering","type":"exact"}],"termid":"FYPO:0006330"}


id: MONDO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Jaccoud syndrome","secondary_identifiers":["DOID:13080","MEDGEN:508877","ICD9:714.4","SCTID:84801008","UMLS:C0152084"],"synonyms":[{"name":"Jaccoud syndrome","type":"exact"},{"name":"Jaccoud's syndrome","type":"exact"}],"termid":"MONDO:0001629","xrefs":{"Monarch":{"xref_id":"0001629"}}}


id: GO:0008780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3R)-hydroxyacyl-[ACP] + UDP-N-acetyl-alpha-D-glucosamine = a UDP-3-O-[(3R)-3-hydroxyacyl]-N-acetyl-alpha-D-glucosamine + holo-[ACP].","definition_xrefs":["RHEA:67812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity","secondary_identifiers":["EC:2.3.1.129","MetaCyc:RXN-22480"],"synonyms":[{"name":"(R)-3-hydroxytetradecanoyl-acyl-carrier-protein:UDP-N-acetylglucosamine 3-O-(3-hydroxytetradecanoyl)transferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine acyltransferase activity","type":"related"},{"name":"acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase activity","type":"exact"},{"name":"acyl-[acyl-carrier protein]-UDP-N-acetylglucosamine O-acyltransferase activity","type":"exact"},{"name":"acyl-acyl-carrier-protein-UDP-N-acetylglucosamine O-acyltransferase","type":"broad"},{"name":"uridine diphosphoacetylglucosamine acyltransferase activity","type":"related"}],"termid":"GO:0008780"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: GO:0055119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the extent of cardiac muscle contraction is reduced.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of cardiac muscle","termid":"GO:0055119"}


id: PBO:0040847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 2","termid":"PBO:0040847"}


id: PBO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-b (predicted)","termid":"PBO:0002372"}


id: PBO:0069157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 409, pseudogene","termid":"PBO:0069157"}


id: MONDO:0020194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital alacrima (obsolete MONDO:0020194)","secondary_identifiers":["Orphanet:98604"],"termid":"MONDO:0020194","xrefs":{"Monarch":{"xref_id":"0020194"}}}


id: GO:2000709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"is_a","term_name":"regulation of centromeric sister chromatid cohesion","termid":"GO:0070602"},{"relation_name":"regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000709"}


id: RO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in the end of s if p results in a change of state in s whereby s either ceases to exist, or s becomes functionally impaired or s has its fate committed such that it is put on a path to be degraded.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_ending_of","termid":"RO:0002552"}


id: PBO:0018163
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SSO1","termid":"PBO:0018163"}


id: PBO:0081243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 12","termid":"PBO:0081243"}


id: MOD:00398
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a carbamoyl (carboxamido) group. Replacement of an amino hydrogen produces a ureido group.","definition_xrefs":["DeltaMass:56","PubMed:10978403","Unimod:5","PubMed:12203680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoylated residue","synonyms":[{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"exact"}],"termid":"MOD:00398"}


id: PBO:0080935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor pseudogene 1","termid":"PBO:0080935"}


id: MONDO:0021651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A joint presentation of syndactyly (fusion of digits) and polydactyly (production of supernumerary digits).","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synpolydactyly","secondary_identifiers":["Orphanet:93403","SCTID:84598000","NCIT:C125597","UMLS:C2699746","NCIT:C75003","MEDGEN:437845","MESH:C538153","GARD:5087","SCTID:715724002"],"synonyms":[{"name":"SPD","type":"related"},{"name":"polysyndactyly","type":"exact"},{"name":"syndactyly type 2","type":"exact"},{"name":"synpolydactyly","type":"exact"}],"termid":"MONDO:0021651","xrefs":{"Monarch":{"xref_id":"0021651"}}}


id: PBO:0046179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2","termid":"PBO:0046179"}


id: PBO:0072508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 37","termid":"PBO:0072508"}


id: PBO:0067666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 845, pseudogene","termid":"PBO:0067666"}


id: PBO:0044013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 2","termid":"PBO:0044013"}


id: PBO:0036222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_rDNA","termid":"PBO:0036222"}


id: MOD:00655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an myristoylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoylated residue","termid":"MOD:00438"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-myristoylated residue","synonyms":[{"name":"SMyrRes","type":"exact"}],"termid":"MOD:00655"}


id: GO:0002649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"}


id: PBO:0039768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 3 (Gill blood group)","termid":"PBO:0039768"}


id: SO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide match to a primer sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer_match","synonyms":[{"name":"primer match","type":"exact"}],"termid":"SO:0001472"}


id: PBO:0052122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 intronic transcript 1","termid":"PBO:0052122"}


id: PBO:0073869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 5","termid":"PBO:0073869"}


id: PBO:0085335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine synthase; functions in phospholipid biosynthesis; transcriptionally repressed by myo-inositol and choline","termid":"PBO:0085335"}


id: PBO:0061939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily N member 2","termid":"PBO:0061939"}


id: PBO:0026705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_tryptophan_level","termid":"PBO:0026705"}


id: GO:0051696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of capping protein from the pointed (or minus) end of actin filaments to free the ends for addition, exchange or removal of further actin subunits.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament uncapping","termid":"GO:0051695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"pointed-end actin filament uncapping","synonyms":[{"name":"minus end F-actin uncapping","type":"exact"},{"name":"minus end actin filament uncapping","type":"exact"},{"name":"minus-end F-actin uncapping","type":"exact"},{"name":"minus-end actin filament uncapping","type":"exact"},{"name":"pointed end F-actin uncapping","type":"exact"},{"name":"pointed end actin filament uncapping","type":"exact"},{"name":"pointed-end F-actin uncapping","type":"exact"}],"termid":"GO:0051696"}


id: PBO:0076442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 1","termid":"PBO:0076442"}


id: PBO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E2","termid":"PBO:0075521"}


id: PBO:0073781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 3","termid":"PBO:0073781"}


id: GO:0045058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which T cells that express T cell receptors that are restricted by self MHC protein complexes and tolerant to self antigens are selected for further maturation.","definition_xrefs":["PMID:12414722","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell selection","secondary_identifiers":["Wikipedia:Thymocyte"],"synonyms":[{"name":"T lymphocyte selection","type":"exact"},{"name":"T-cell selection","type":"exact"},{"name":"T-lymphocyte selection","type":"exact"}],"termid":"GO:0045058"}


id: MONDO:0005195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Septic peritonitis is an inflammatory condition of the peritoneum that occurs secondary to microbial contamination. This clinically important condition has a wide variety of clinical courses as well as high morbidity and mortality due to secondary multiorgan dysfunction. This article reviews the etiology and pathophysiology of this condition and its diagnosis in small animals; a companion article addresses treatment and prognosis.","definition_xrefs":["EFO:0002623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious peritonitis","termid":"MONDO:0004522"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septic peritonitis","secondary_identifiers":["UMLS:C0341503","MEDGEN:574434","PMID:22911262","icd11.foundation:1560416608","Wikipedia:Septic_peritonitis"],"termid":"MONDO:0005195","xrefs":{"Monarch":{"xref_id":"0005195"}}}


id: PBO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_autophagy","termid":"PBO:0031816"}


id: PBO:0046690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein regulatory factor 1","termid":"PBO:0046690"}


id: GO:0030880
data:
  {"annotated_genes":["SJAG_03118","SJAG_04852","SJAG_04894","SJAG_00458","SJAG_01436","SJAG_03144","SJAG_04420","SJAG_04559","SJAG_03035","SJAG_00421","SJAG_00095","SJAG_00901","SJAG_02871","SJAG_02174","SJAG_01713","SJAG_01562","SJAG_01207","SJAG_04261","SJAG_00637","SJAG_04106","SJAG_04994","SJAG_03206","SJAG_00139","SJAG_03107","SJAG_04274","SJAG_04933","SJAG_03289","SJAG_03618","SJAG_03356","SJAG_03956","SJAG_03578","SJAG_00116","SJAG_01151","SJAG_00731","SJAG_02101","SJAG_01710","SJAG_00150","SJAG_01610","SJAG_03193","SJAG_04614","SJAG_04654","SJAG_04408","SJAG_01475","SJAG_03900","SJAG_00619","SJAG_03761","SJAG_04917","SJAG_02172","SJAG_05239","SJAG_01128","SJAG_01698","SJAG_02506","SJAG_02600","SJAG_04977","SJAG_01808","SJAG_02070","SJAG_03285","SJAG_02458","SJAG_02627","SJAG_03921","SJAG_00159","SJAG_04934","SJAG_00995","SJAG_04030","SJAG_00119","SJAG_00512","SJAG_00584","SJAG_00741","SJAG_02725","SJAG_01444","SJAG_03014","SJAG_03468","SJAG_01765","SJAG_00758","SJAG_04368","SJAG_01313","SJAG_00872","SJAG_02653","SJAG_03181","SJAG_04161","SJAG_02541","SJAG_00735"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74630,72072,76543,76930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[77945,68425,74207,80332,72772],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[79114,89172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034245"},{"annotations":[71811,73601,119828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031380"},{"annotations":[106689,116055,104332,69124,117365,78649,71781,77535,78227,58376,76220,75841,72746,77428,77221,76868,79184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005736"},{"annotations":[77060,72342,78647,80638,74975,76866,76165,74411,72744,77219,78225,79784,114685],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005665"},{"annotations":[81365,71780,78542,64160,75840,77220,118607,76683,57123,75132,76867,72811,81503,78226,72745,78648,72979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005666"},{"annotations":[80345,73728],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[105410,71575,97357,73049,69565,58100,72319,76124,78398,75331,59938,77257,76642,82034,78527,119412],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[77844,71835],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[82149,80896,71576],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[110799,71818,80413,72044,76069,116666,77848,93943],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[67297,77904,61393],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":82,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00421":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01128":null,"SJAG_01151":null,"SJAG_01207":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01444":null,"SJAG_01475":null,"SJAG_01562":null,"SJAG_01610":null,"SJAG_01698":null,"SJAG_01710":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01808":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02172":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02506":null,"SJAG_02541":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_02725":null,"SJAG_02871":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03107":null,"SJAG_03118":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03193":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03289":null,"SJAG_03356":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03618":null,"SJAG_03761":null,"SJAG_03900":null,"SJAG_03921":null,"SJAG_03956":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04408":null,"SJAG_04420":null,"SJAG_04559":null,"SJAG_04614":null,"SJAG_04654":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04933":null,"SJAG_04934":null,"SJAG_04977":null,"SJAG_04994":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"multisubunit RNA polymerase","type":"exact"}],"termid":"GO:0030880","terms_by_termid":{"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005736":null,"GO:0016593":null,"GO:0031380":null,"GO:0034245":null,"GO:0070985":null}}


id: GO:0099000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a contractile tail ejection system consisting of a baseplate, a central tube and an external contractile sheath. Upon binding to the host cell surface, the baseplate changes its conformation and triggers sheath contraction, driving the rigid internal tail tube through the cell envelope. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["GOC:dos","PMID:26283379","VZ:3950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, contractile tail mechanism","synonyms":[{"name":"viral contractile tail ejection system","type":"exact"},{"name":"viral genome ejection through host cell envelope, contractile tail mechanism","type":"related"}],"termid":"GO:0099000"}


id: GO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the lectin pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, lectin pathway","secondary_identifiers":["Reactome:R-HSA-166662"],"synonyms":[{"name":"complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001867"}


id: PBO:0092035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine (ugc), mitochondrial","termid":"PBO:0092035"}


id: PBO:0088744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane OPT oligopeptide transmembrane transporter family Isp4","termid":"PBO:0088744"}


id: GO:0010051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the conducting tissues. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem and phloem pattern formation","synonyms":[{"name":"vascular tissue pattern formation","type":"exact"}],"termid":"GO:0010051"}


id: GO:0033588
data:
  {"annotated_genes":["SJAG_04175","SJAG_03677","SJAG_00579","SJAG_04704","SJAG_04756","SJAG_04452"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58930,66279,73874,74011,79852,81468],"is_not":false,"summary":null,"term":"GO:0033588"}]},"cv_name":"cellular_component","definition":"A heterohexameric protein complex composed two discrete heterotrimeric subcomplexes that is involved in modification of wobble nucleosides in tRNA.","definition_xrefs":["PMID:17018299","GOC:mah","PMID:18755837","PMID:23165209","PMID:11435442","GOC:bhm","GOC:jh","PMID:11689709","PMID:15769872","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03677":null,"SJAG_04175":null,"SJAG_04452":null,"SJAG_04704":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"elongator holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0033589"],"synonyms":[{"name":"Elongator core complex","type":"related"}],"termid":"GO:0033588","terms_by_termid":{"GO:0033588":null}}


id: PBO:0078732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 5-1","termid":"PBO:0078732"}


id: PBO:0068922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 165, pseudogene","termid":"PBO:0068922"}


id: GO:0015842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The active transport of aminergic neurotransmitters into a synaptic vesicle. This import is fuelled by an electrochemical gradient across the vesicle membrane, established by the action proton pumps.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"neurotransmitter loading into synaptic vesicle","termid":"GO:0098700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"aminergic neurotransmitter loading into synaptic vesicle","termid":"GO:0015842"}


id: GO:0070349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of brown fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fat cell proliferation","termid":"GO:0070346"},{"relation_name":"is_a","term_name":"regulation of brown fat cell proliferation","termid":"GO:0070347"},{"relation_name":"positively_regulates","term_name":"brown fat cell proliferation","termid":"GO:0070342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of brown fat cell proliferation","synonyms":[{"name":"activation of brown fat cell proliferation","type":"narrow"},{"name":"positive regulation of brown adipocyte proliferation","type":"exact"},{"name":"positive regulation of brown adipose cell proliferation","type":"exact"},{"name":"stimulation of brown fat cell proliferation","type":"narrow"},{"name":"up regulation of brown fat cell proliferation","type":"exact"},{"name":"up-regulation of brown fat cell proliferation","type":"exact"},{"name":"upregulation of brown fat cell proliferation","type":"exact"}],"termid":"GO:0070349"}


id: GO:0034254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide catabolic process","termid":"GO:0034251"},{"relation_name":"is_a","term_name":"regulation of urea metabolic process","termid":"GO:0034255"},{"relation_name":"regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071941","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of urea catabolic process","synonyms":[{"name":"regulation of urea breakdown","type":"exact"},{"name":"regulation of urea catabolism","type":"exact"},{"name":"regulation of urea degradation","type":"exact"}],"termid":"GO:0034254"}


id: MONDO:0007174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lown-Ganong-Levine syndrome is an extremely rare conduction disorder characterized by a short PR interval (less than or equal to 120 ms) with normal QRS complex on electrocardiogram associated with the occurrence of episodes of atrial tachyarrythmias (e.g. atrial fibrillation, atrial tachycardia).","definition_xrefs":["Orphanet:844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lown-Ganong-Levine syndrome","secondary_identifiers":["ICD9:426.81","SCTID:55475008","DOID:13087","UMLS:C1862387","icd11.foundation:414532162","MedDRA:10024984","GARD:16550","MESH:D008151","OMIM:108950","MEDGEN:354734"],"synonyms":[{"name":"LGL syndrome","type":"exact"},{"name":"Lown-Ganong-Levine syndrome","type":"exact"},{"name":"atrial tachyarrhythmia with short PR interval","type":"exact"},{"name":"syndrome of short P-R interval, normal QRS complexes, and supraventricular tachycardias","type":"exact"}],"termid":"MONDO:0007174","xrefs":{"Monarch":{"xref_id":"0007174"}}}


id: PBO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, ribosome associated Sks2","termid":"PBO:0090034"}


id: MONDO:0022805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic malakoplakia","secondary_identifiers":["MEDGEN:540762","UMLS:C0267536"],"termid":"MONDO:0022805","xrefs":{"Monarch":{"xref_id":"0022805"}}}


id: PR:C6Y4B5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.12 gene.","definition_xrefs":["UniProtKB:C6Y4B5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein SPAC212.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.12","synonyms":[{"name":"Spom972h-SPAC212.12","type":"exact"}],"termid":"PR:C6Y4B5"}


id: PBO:0060289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6","termid":"PBO:0060289"}


id: GO:0090280
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion import","termid":"GO:0090279"},{"relation_name":"positively_regulates","term_name":"calcium ion import","termid":"GO:0070509"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transmembrane calcium influx","type":"related"}],"termid":"GO:0090280","terms_by_termid":{"GO:1905665":null}}


id: GO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroneopterin 3'-triphosphate = 6-pyruvoyl-5,6,7,8-tetrahydropterin + H+ + triphosphate.","definition_xrefs":["EC:4.2.3.12","RHEA:22048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"6-pyruvoyltetrahydropterin synthase activity","secondary_identifiers":["MetaCyc:4.2.3.12-RXN","Reactome:R-HSA-1474184","KEGG_REACTION:R04286"],"synonyms":[{"name":"2-amino-4-oxo-6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydroxypteridine triphosphate lyase activity","type":"related"},{"name":"2-amino-4-oxo-6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydroxypteridine triphosphate-lyase (6-pyruvoyl-5,6,7,8-tetrahydropterin-forming)","type":"related"},{"name":"6-pyruvoyl tetrahydrobiopterin synthase activity","type":"related"},{"name":"PTPS activity","type":"related"}],"termid":"GO:0003874"}


id: PBO:0084292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral vacuolar membrane protein; involved in vacuole inheritance and morphology; activates Fab1p kinase activity under basal conditions and also after hyperosmotic shock","termid":"PBO:0084292"}


id: PBO:0075495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 33","termid":"PBO:0075495"}


id: PBO:0044078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin like 1","termid":"PBO:0044078"}


id: PBO:0079357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3c","termid":"PBO:0079357"}


id: GO:0100055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylserine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100055)","termid":"GO:0100055"}


id: GO:0044793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism stops, prevents or reduces the frequency, rate or extent of a process being mediated by a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral process","termid":"GO:0044788"},{"relation_name":"negatively_regulates","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral process","termid":"GO:0044793"}


id: PBO:0043867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cereblon","termid":"PBO:0043867"}


id: FYPO:0003362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein acetylation is normal (i.e. indistinguishable from wild type). Protein acetylation is the addition of an acetyl group to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein acetylation during vegetative growth","synonyms":[{"name":"normal protein acetylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003362"}


id: MONDO:0011404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caronte","secondary_identifiers":["OMIM:604172","UMLS:C1858724","MEDGEN:349004"],"synonyms":[{"name":"Car","type":"related"},{"name":"Caronte","type":"exact"}],"termid":"MONDO:0011404","xrefs":{"Monarch":{"xref_id":"0011404"}}}


id: GO:0015031
data:
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id: PATO:0000405
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id: PBO:0003437
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id: PBO:0074091
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id: GO:0009683
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indoleacetic acid metabolic process","synonyms":[{"name":"IAA metabolic process","type":"exact"},{"name":"indole acetic acid metabolic process","type":"exact"},{"name":"indole acetic acid metabolism","type":"exact"},{"name":"indoleacetic acid metabolism","type":"exact"}],"termid":"GO:0009683"}


id: MONDO:0019250
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  {"annotated_genes":["SJAG_04203","SJAG_01881","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[88281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044330"},{"annotations":[87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01881":null,"SJAG_04203":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of biogenic amine metabolism and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18976","MEDGEN:1842301","UMLS:C5681274","Orphanet:79214"],"synonyms":[{"name":"disorder of biogenic amine metabolism and transport","type":"related"}],"termid":"MONDO:0019250","terms_by_termid":{"MONDO:0012407":null,"MONDO:0015005":null,"MONDO:0044330":null},"xrefs":{"Monarch":{"xref_id":"0019250"}}}


id: PR:Q10368
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22E12.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22E12.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.18","synonyms":[{"name":"Spom972h-SPAC22E12.18","type":"exact"}],"termid":"PR:Q10368"}


id: PBO:0051049
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id: GO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of sodium ions across a membrane. The complex comprises a membrane sector (F0 or V0) that carries out ion transport and a cytoplasmic compartment sector (F1 or V1) that catalyzes ATP synthesis or hydrolysis.","definition_xrefs":["GOC:mah","PMID:14656431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium ion-transporting two-sector ATPase complex","synonyms":[{"name":"sodium-transporting two-sector ATPase complex","type":"exact"}],"termid":"GO:0016472"}


id: GO:0102614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: germacra-1(10),4,11(13)-trien-12-oate + O2 + reduced [NADPH--hemoprotein reductase] = 8beta-hydroxygermacra-1(10),4,11(13)-trien-12-oate + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:57964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"germacrene A acid 8beta-hydroxylase activity","secondary_identifiers":["EC:1.14.14.168","MetaCyc:RXN-15460"],"termid":"GO:0102614"}


id: PBO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"date","termid":"PBO:0000083"}


id: PBO:0062988
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 3","termid":"PBO:0062988"}


id: GO:0010490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-keto-rhamnose + NADPH = UDP-rhamnose + NADP+.","definition_xrefs":["GOC:tair_curators","PMID:17190829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"UDP-4-keto-rhamnose-4-keto-reductase activity","termid":"GO:0010490"}


id: FYPO:0007960
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id: FYPO:0007464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to hypoxia","synonyms":[{"name":"increased RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"increased RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"increased RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"increased transcript level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0007464"}


id: PBO:0086018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086018"}


id: MONDO:0859005
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"preaxial digit brachydactyly-webbed fingers","secondary_identifiers":["MEDGEN:1843425","Orphanet:633211","UMLS:C5816807"],"termid":"MONDO:0859005","xrefs":{"Monarch":{"xref_id":"0859005"}}}


id: GO:0043167
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id: GO:1903693
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id: GO:0004525
data:
  {"annotated_genes":["SJAG_03689","SJAG_02156","SJAG_04019","SJAG_01463","SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60018,60924,69174,75235,78378],"is_not":false,"summary":null,"term":"GO:0004525"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.","definition_xrefs":["PMID:11157775","PMID:15242644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"double-stranded RNA-specific ribonuclease activity","termid":"GO:0032296"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01463":null,"SJAG_02156":null,"SJAG_03689":null,"SJAG_04019":null,"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"ribonuclease III activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:3.1.26.3","MetaCyc:3.1.26.3-RXN","Reactome:R-HSA-203893","Reactome:R-HSA-9708292","Reactome:R-HSA-9708408","Reactome:R-HSA-203862","Reactome:R-HSA-9820840","Reactome:R-HSA-426464"],"synonyms":[{"name":"RNase III activity","type":"related"},{"name":"pre-mRNA 3'-end processing endonuclease","type":"narrow"},{"name":"ribonuclease 3 activity","type":"related"}],"termid":"GO:0004525","terms_by_termid":{"GO:0004525":null}}


id: FYPO:0001146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of misfolded glycoprotein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased misfolded glycoprotein degradation during vegetative growth","synonyms":[{"name":"decreased misfolded glycoprotein catabolic process during vegetative growth","type":"exact"},{"name":"decreased misfolded glycoprotein catabolism during vegetative growth","type":"exact"},{"name":"decreased misfolded glycoprotein degradation during mitotic cell cycle","type":"related"},{"name":"reduced misfolded glycoprotein degradation during vegetative growth","type":"exact"}],"termid":"FYPO:0001146"}


id: GO:0031387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of a Cdc2-class (also known as Cdc28) cyclin-dependent kinase and an M-phase cyclin such as S. pombe Cdc13. The MPF complex phosphorylates and activates the anaphase promoting complex (APC).","definition_xrefs":["PMID:12045216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MPF complex","termid":"GO:0031387"}


id: PBO:0069096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 343, pseudogene","termid":"PBO:0069096"}


id: PBO:0029211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dTTP_biosynthetic_process","termid":"PBO:0029211"}


id: MONDO:0004274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast carcinoma characterized by the presence of a mesenchymal cellular component. The mesenchymal cellular component ranges from cartilaginous and osseous, to purely sarcomatous.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaplastic breast carcinoma","termid":"MONDO:0006043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed epithelial/mesenchymal metaplastic breast carcinoma","secondary_identifiers":["DOID:7541","MEDGEN:307769","NCIT:C40364","ONCOTREE:MMBC","UMLS:C1513365"],"synonyms":[{"name":"breast carcinosarcoma","type":"exact"},{"name":"mixed type metaplastic breast cancer","type":"related"}],"termid":"MONDO:0004274","xrefs":{"Monarch":{"xref_id":"0004274"}}}


id: MONDO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An endocarditis (disease) caused by infection with Fungi.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infective endocarditis","termid":"MONDO:0000565"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"mycotic endocarditis","secondary_identifiers":["UMLS:C0276648","MEDGEN:547460","SCTID:86348002"],"synonyms":[{"name":"Fungi caused endocarditis (disease)","type":"exact"},{"name":"Fungi endocarditis (disease)","type":"exact"},{"name":"fungal endocarditis","type":"related"},{"name":"mycotic endocarditis","type":"exact"}],"termid":"MONDO:0042433","xrefs":{"Monarch":{"xref_id":"0042433"}}}


id: PBO:0028365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_septum_in_stationary_phase","termid":"PBO:0028365"}


id: FYPO:0002673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing torin1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on torin1","synonyms":[{"name":"normal cell population growth in presence of torin1","type":"exact"},{"name":"normal cell population growth on torin1","type":"exact"},{"name":"normal cellular response to torin1","type":"related"},{"name":"normal growth on torin 1","type":"exact"},{"name":"normal vegetative cell population growth on torin1","type":"exact"}],"termid":"FYPO:0002673"}


id: MONDO:0800501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of conditions with varied degree of cognitive, language, behavioral, and motor regression associated with marked spike-wave activation in sleep. The regression is seen within weeks of the EEG pattern. This syndrome encompasses the previous syndromes epileptic encephalopathy with continuous spike-wave in sleep and atypical childhood epilepsy with centrotemporal spikes (also previously known as pseudo-Lennox syndrome and atypical benign partial epilepsy). Landau–Kleffner syndrome is a specific subtype of EE-SWAS, where regression affects mainly language, with an acquired auditory agnosia.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome with developmental and/or epileptic encephalopathy","termid":"MONDO:0800500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"developmental and/or epileptic encephalopathy with spike-wave activation in sleep","synonyms":[{"name":"DEE-SWAS","type":"exact"},{"name":"EE-SWAS","type":"exact"}],"termid":"MONDO:0800501","xrefs":{"Monarch":{"xref_id":"0800501"}}}


id: PBO:0068436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 6, pseudogene","termid":"PBO:0068436"}


id: GO:0043246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Large, cysteine proteinase rich lysosomes, often found in the amastigote (an intracytoplasmic, nonflagellated form of the parasite) stage of Leishmania species belonging to the mexicana complex.","definition_xrefs":["PMID:1999020","PMID:11206117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"megasome","termid":"GO:0043246"}


id: SO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 25S rRNA is an RNA component of the large subunit of cytosolic ribosomes most eukaryotes.","definition_xrefs":["RSC:cb","PMID:2100998","PMID:15493135"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_25S_gene","termid":"SO:0002242"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_25S_rRNA","synonyms":[{"name":"cytosolic 25S LSU rRNA","type":"exact"},{"name":"cytosolic 25S rRNA","type":"exact"},{"name":"cytosolic 25S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 25S","type":"exact"}],"termid":"SO:0001002"}


id: PBO:0085580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5' RNA end processing; substrates include mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p","termid":"PBO:0085580"}


id: GO:0015757
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The process in which galactose is transported across a lipid bilayer, from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"galactose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose transport","type":"related"}],"termid":"GO:0015757","terms_by_termid":{"GO:0140425":null}}


id: GO:0003931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. Any member of the Rho subfamily of the RAS superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton.","definition_xrefs":["EC:3.6.1.47","ISBN:0198547684","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Rho small monomeric GTPase activity (obsolete GO:0003931)","synonyms":[{"name":"Rho small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003931"}


id: MONDO:0015680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare pervasive developmental disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare pervasive developmental disorder (obsolete MONDO:0015680)","secondary_identifiers":["Orphanet:168778","MedDRA:10061345"],"synonyms":[{"name":"rare ASD","type":"narrow"},{"name":"rare PDD","type":"narrow"},{"name":"rare autism spectrum disorder","type":"narrow"},{"name":"rare pervasive developmental disorder","type":"narrow"}],"termid":"MONDO:0015680","xrefs":{"Monarch":{"xref_id":"0015680"}}}


id: PBO:0087276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-glutathionyl-(chloro)hydroquinone reductase (GS-HQR); glutathione transferase involved in cell-surface biosynthesis and architecture; catalyzes glutathione (GSH)-dependent reduction of GS-trichloro-p-hydroquinone to trichloro-p-hydroquinone; expression upregulated upon exposure to genotoxic agents, such as methyl methanesulfonate, cisplatin and bleomycin; not an essential gene; similar to YGR154C; green fluorescent protein (GFP)-fusion protein localizes to cytoplasm","termid":"PBO:0087276"}


id: PBO:0053228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LGR4 antisense RNA 1","termid":"PBO:0053228"}


id: PBO:0043499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 6","termid":"PBO:0043499"}


id: PBO:0087203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine uroporphyrinogen III transmethylase; involved in the biosynthesis of siroheme, a prosthetic group used by sulfite reductase; required for sulfate assimilation and methionine biosynthesis","termid":"PBO:0087203"}


id: MONDO:0015441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 7 syndrome is a rare chromosomal anomaly syndrome, with highly variable phenotype, principally characterized by growth failure, short stature, intellectual disability, dermatological abnormalities (nevus flammeus, dark pigmented nevi, café-au-lait spots), microcephaly and facial dysmorphism (incl. facial asymmetry, small ears, abnormal palpebral fissures, ptosis, epicanthic folds, hyper/hypotelorism). Additional reported features include convulsions, cleft lip and palate, clinodactyly, kyphoscoliosis and genital anomalies (i.e. cryptorchidism, hypospadias, micropenis).","definition_xrefs":["Orphanet:1449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 7 disorder","termid":"MONDO:0700014"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 7","secondary_identifiers":["MESH:C537813","NCIT:C121986","GARD:1345","UMLS:C2931622","MEDGEN:419454","SCTID:765489006"],"synonyms":[{"name":"R7","type":"related"},{"name":"Ring 7","type":"related"},{"name":"Ring chromosome 7 syndrome","type":"related"},{"name":"Ring chromosome type 7","type":"exact"},{"name":"chromosome 7 ring","type":"related"},{"name":"rose cluster 7","type":"exact"}],"termid":"MONDO:0015441","xrefs":{"Monarch":{"xref_id":"0015441"}}}


id: PR:Q10413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F3.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.08c","synonyms":[{"name":"Spom972h-SPAC1F3.08c","type":"exact"}],"termid":"PR:Q10413"}


id: MONDO:0016513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. This term refers to a group of diseases characterized by alpha-thalassemia and an associated disorder. Three conditions are included in this group: alpha thalassemia - X-linked intellectual deficit (or ATR-X syndrome), alpha-thalassemia-intellectual deficit syndrome (or ATR-16 syndrome) and alpha-thalassemia-myelodysplastic disease (or ATMDS).*","definition_xrefs":["Orphanet:232288"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-thalassemia-related diseases (obsolete MONDO:0016513)","secondary_identifiers":["ICD10CM:D56.0"],"termid":"MONDO:0016513","xrefs":{"Monarch":{"xref_id":"0016513"}}}


id: MONDO:0012258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by belt-like areas of erythema with multiple vesicles and small blisters at the advancing edge of erythema.","definition_xrefs":["Orphanet:158681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2E, with migratory circinate erythema","secondary_identifiers":["GARD:16990","SCTID:716700003","OMIM:609352","MEDGEN:324475","MESH:C563730","UMLS:C1836284"],"synonyms":[{"name":"EBS-migr","type":"exact"},{"name":"epidermolysis bullosa simplex 2E, with migratory circinate erythema","type":"exact"},{"name":"epidermolysis bullosa simplex with migratory circinate erythema","type":"exact"}],"termid":"MONDO:0012258","xrefs":{"Monarch":{"xref_id":"0012258"}}}


id: GO:0110068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucosylglycerate + phosphate = glucose-1-phosphate + D-glycerate.","definition_xrefs":["PMID:28754708","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glucosylglycerate phosphorylase activity","termid":"GO:0110068"}


id: MONDO:0009741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 1","secondary_identifiers":["OMIM:256700","MEDGEN:412713","UMLS:C2749485"],"synonyms":[{"name":"neuroblastoma, susceptibility to","type":"broad"},{"name":"neuroblastoma, susceptibility to, 1, autosomal dominant, somatic mutation","type":"exact"},{"name":"susceptibility to neuroblastoma","type":"broad"}],"termid":"MONDO:0009741","xrefs":{"Monarch":{"xref_id":"0009741"}}}


id: MONDO:0030718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 67","secondary_identifiers":["UMLS:C5676947","MEDGEN:1804099","OMIM:619803","DOID:0070566"],"synonyms":[{"name":"SPGF67","type":"exact"},{"name":"spermatogenic failure 67","type":"exact"}],"termid":"MONDO:0030718","xrefs":{"Monarch":{"xref_id":"0030718"}}}


id: PBO:0111856
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 subfamily","termid":"PBO:0111856"}


id: MOD:01441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a natural, standard, encoded residue.","definition_xrefs":["PubMed:18688235","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural residue","termid":"MOD:00009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural, standard, encoded residue","termid":"MOD:01441"}


id: PBO:0077902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase gamma 1","termid":"PBO:0077902"}


id: PBO:0087961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein with a role in cell wall polymer composition; localizes on inner surface of plasma membrane at bud and in daughter cell; SKG1 has a paralog, AIM20, that arose from the whole genome duplication","termid":"PBO:0087961"}


id: GO:0002935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine37 in tRNA + 2 reduced [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = 2-methyladenosine37 in tRNA + 5'-deoxyadenosine + L-methionine + 2 oxidized [2Fe-2S]-[ferredoxin] + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43332","PMID:22891362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003824","GO:0140101","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA (adenine(37)-C2)-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-7007"],"synonyms":[{"name":"tRNA (adenine(37)-C(2))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenosine(37)-C2-)-methyltransferase activity","type":"exact"}],"termid":"GO:0002935"}


id: FYPO:0008091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated rRNA measured in a cell is higher than normal.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}


id: GO:0016678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces an acceptor other than a nitrogenous group or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on heme group of donors, other acceptors (obsolete GO:0016678)","synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, other acceptors","type":"exact"},{"name":"oxidoreductase activity, acting on heme group of donors, other acceptors","type":"exact"}],"termid":"GO:0016678"}


id: PATO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000509 stress sensitivity value (obsolete PATO:0000509)","termid":"PATO:0000509"}


id: GO:0097344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that comprises Rix1p, Ipi1p and Ipi3p, and is required for processing of ITS2 sequences from 35S pre-rRNA. The Rix1 complex has been identified in budding yeast and fission yeast, and members of this complex are conserved in higher eukaryotes.","definition_xrefs":["GOC:vw","PMID:14759368","PMID:21385875","PMID:15260980"],"gene_count":0,"genotype_count":0,"name":"obsolete Rix1 complex (obsolete GO:0097344)","synonyms":[{"name":"IPI complex","type":"exact"}],"termid":"GO:0097344"}


id: PBO:0072458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 22","termid":"PBO:0072458"}


id: PBO:0073377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 1","termid":"PBO:0073377"}


id: PR:O14050
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msy2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MscS family protein C2C4.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.17c","synonyms":[{"name":"Spom972h-msy2","type":"exact"}],"termid":"PR:O14050"}


id: GO:1905704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inhibitory synapse assembly.","definition_xrefs":["PMID:27779093","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synapse assembly","termid":"GO:0051965"},{"relation_name":"is_a","term_name":"regulation of inhibitory synapse assembly","termid":"GO:1905702"},{"relation_name":"positively_regulates","term_name":"inhibitory synapse assembly","termid":"GO:1904862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of inhibitory synapse assembly","synonyms":[{"name":"activation of inhibitory synapse assembly","type":"narrow"},{"name":"activation of inhibitory synapse formation","type":"narrow"},{"name":"positive regulation of inhibitory synapse formation","type":"exact"},{"name":"up regulation of inhibitory synapse assembly","type":"exact"},{"name":"up regulation of inhibitory synapse formation","type":"exact"},{"name":"up-regulation of inhibitory synapse assembly","type":"exact"},{"name":"up-regulation of inhibitory synapse formation","type":"exact"},{"name":"upregulation of inhibitory synapse assembly","type":"exact"},{"name":"upregulation of inhibitory synapse formation","type":"exact"}],"termid":"GO:1905704"}


id: PBO:0079942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH2A antisense RNA 1","termid":"PBO:0079942"}


id: FYPO:0004649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body during metaphase does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0006825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"abolished protein localization to spindle pole body during metaphase during mitotic cell cycle","type":"exact"},{"name":"protein absent from mitotic spindle pole body during metaphase","type":"related"},{"name":"protein localisation to mitotic spindle pole body abolished during metaphase","type":"exact"},{"name":"protein localization to mitotic SPB abolished during metaphase","type":"exact"},{"name":"protein localization to mitotic spindle pole body abolished during metaphase","type":"exact"},{"name":"protein localization to spindle pole body abolished during metaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004649"}


id: PBO:0003597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic isoleucine-tRNA ligase Irs1 (predicted)","termid":"PBO:0003597"}


id: PBO:0050541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 2","termid":"PBO:0050541"}


id: PBO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase, acidic pseudogene 2","termid":"PBO:0043004"}


id: PR:O74377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sulfate anion transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C3H7.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.02","secondary_identifiers":["UniProtKB:O74377"],"synonyms":[{"name":"Spom972h-SLC26A1","type":"exact"}],"termid":"PR:O74377"}


id: PBO:0059366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 1","termid":"PBO:0059366"}


id: PBO:0065619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase domain containing 1","termid":"PBO:0065619"}


id: PBO:0069675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 952, pseudogene","termid":"PBO:0069675"}


id: GO:0001881
data:
  {"annotated_genes":["SJAG_01448","SJAG_04428","SJAG_03324","SJAG_05950","SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104462],"is_not":false,"summary":null,"term":"GO:0001881"},{"annotations":[119156,117140,65222,100354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The process that results in the return of receptor molecules to an active state and an active cellular location after they have been stimulated by a ligand. An active state is when the receptor is ready to receive a signal.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_02619":null,"SJAG_03324":null,"SJAG_04428":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor recycling","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0001881","terms_by_termid":{"GO:0001881":null,"GO:0016562":null}}


id: PBO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 5","termid":"PBO:0062074"}


id: GO:0099558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that preserves the structural organistation and orientation of a synaptic cellular component such as the synaptic cytoskeleton and molecular scaffolds.","definition_xrefs":["PMID:25611509","GOC:dos","PMID:24449494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction maintenance","termid":"GO:0034331"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of synapse structure","synonyms":[{"name":"synaptic maintenance","type":"exact"}],"termid":"GO:0099558"}


id: FYPO:0006248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is increased during mitosis. Normally, centromere-kinetochore complexes cluster near the old spindle pole body during interphase of the mitotic cell cycle, but are not as tightly clustered during mitosis.","definition_xrefs":["PMID:28825727","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere clustering at nuclear periphery during vegetative growth","termid":"FYPO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased centromere clustering at nuclear periphery during mitosis","synonyms":[{"name":"increased centromere clustering at SPB during mitosis","type":"related"},{"name":"increased centromere clustering at nuclear periphery during M phase of mitotic cell cycle","type":"related"},{"name":"increased centromere clustering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased centromere clustering at old mitotic spindle pole body during mitosis","type":"related"},{"name":"increased centromere clustering at spindle pole body during mitosis","type":"related"},{"name":"increased centromere-SPB clustering during mitosis","type":"related"},{"name":"increased inter-centromere connection during mitosis","type":"exact"},{"name":"increased kinetochore clustering at SPB during mitosis","type":"related"},{"name":"increased kinetochore clustering at old mitotic spindle pole body during mitosis","type":"related"},{"name":"increased kinetochore clustering at spindle pole body during mitosis","type":"related"},{"name":"increased kinetochore localization at spindle pole body during mitosis","type":"related"},{"name":"increased kinetochores to spindle pole body clustering during mitosis","type":"related"},{"name":"increased mitotic centromere clustering at nuclear periphery during mitosis","type":"exact"}],"termid":"FYPO:0006248"}


id: PBO:0090265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER ubiquitin-protein ligase E3 Doa10","termid":"PBO:0090265"}


id: GO:0061089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sequestering of zinc ion (obsolete GO:0061089)","termid":"GO:0061089"}


id: PBO:0049388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 1","termid":"PBO:0049388"}


id: MONDO:0021453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina neoplasm","termid":"MONDO:0021231"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of retina","secondary_identifiers":["MEDGEN:57580","NCIT:C3624","UMLS:C0154027","ICD9:224.5","SCTID:92321003","icd11.foundation:1433648317","ICD10CM:D31.2"],"synonyms":[{"name":"benign neoplasm of the retina","type":"exact"},{"name":"benign retina neoplasm","type":"exact"},{"name":"benign retina tumor","type":"exact"},{"name":"benign retina tumour","type":"exact"},{"name":"benign retinal neoplasm","type":"exact"},{"name":"benign retinal tumor","type":"exact"},{"name":"benign retinal tumour","type":"exact"},{"name":"benign tumor of retina","type":"exact"},{"name":"benign tumor of the retina","type":"exact"},{"name":"benign tumour of retina","type":"exact"},{"name":"benign tumour of the retina","type":"exact"},{"name":"retina benign neoplasm","type":"exact"}],"termid":"MONDO:0021453","xrefs":{"Monarch":{"xref_id":"0021453"}}}


id: GO:0032131
data:
  {"annotated_genes":["SJAG_04778","SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103373],"is_not":false,"summary":null,"term":"GO:0032131"},{"annotations":[89943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032132"}]},"cv_name":"molecular_function","definition":"Binding to an alkylated residue in DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkylated DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032131","terms_by_termid":{"GO:0032131":null,"GO:0032132":null}}


id: PBO:0028387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methylglyoxal","termid":"PBO:0028387"}


id: FYPO:0007847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the meiotic spindle is longer than normal during meiosis I.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long meiotic spindle","termid":"FYPO:0000736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0000120","FYPO:0002399"],"is_obsolete":false,"name":"long meiosis I spindle","synonyms":[{"name":"elongated meiosis I spindle","type":"exact"},{"name":"long spindle during first meiotic nuclear division","type":"exact"},{"name":"long spindle during meiosis I","type":"exact"}],"termid":"FYPO:0007847"}


id: GO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a bicyclic nitroimidazole.","definition_xrefs":["PMID:19039139","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicyclic nitroimidazole metabolic process","termid":"GO:0052801"},{"relation_name":"is_a","term_name":"nitroimidazole catabolic process","termid":"GO:0052804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bicyclic nitroimidazole catabolic process","synonyms":[{"name":"bicyclic nitroimidazole breakdown","type":"exact"},{"name":"bicyclic nitroimidazole catabolism","type":"exact"},{"name":"bicyclic nitroimidazole degradation","type":"exact"}],"termid":"GO:0052800"}


id: MONDO:0100245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired paroxysmal nocturnal hemoglobinuria (obsolete MONDO:0100245)","termid":"MONDO:0100245","xrefs":{"Monarch":{"xref_id":"0100245"}}}


id: FYPO:0005691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body (SPB) moves rapidly back and forth to a lower extent and over a smaller area than normal, causing decreased chromosome movement. Normally, SPB oscillation occurs during mitotic interphase (as well as prophase) but is restricted to a small space.","definition_xrefs":["PMID:12390246","PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"},{"relation_name":"is_a","term_name":"decreased microtubule-based movement during vegetative growth","termid":"FYPO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"decreased mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"decreased mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"decreased mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"decreased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"decreased spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"reduced mitotic spindle pole body oscillation during mitotic interphase","type":"exact"}],"termid":"FYPO:0005691"}


id: PBO:0070522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 21","termid":"PBO:0070522"}


id: MONDO:0008310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hutchinson-Gilford progeria syndrome is a rare, fatal, autosomal dominant and premature aging disease, beginning in childhood and characterized by growth reduction, failure to thrive, a typical facial appearance (prominent forehead, protuberant eyes, thin nose with a beaked tip, thin lips, micrognathia and protruding ears) and distinct dermatologic features (generalized alopecia, aged-looking skin, sclerotic and dimpled skin over the abdomen and extremities, prominent cutaneous vasculature, dyspigmentation, nail hypoplasia and loss of subcutaneous fat).","definition_xrefs":["Orphanet:740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"},{"relation_name":"is_a","term_name":"progeria","termid":"MONDO:0020732"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"Hutchinson-Gilford progeria syndrome","secondary_identifiers":["OMIM:176670","MEDGEN:46123","NORD:1257","SCTID:238870004","NANDO:1201007","GARD:7467","DOID:3911","ICD9:259.8","MedDRA:10036794","NANDO:2200833","NCIT:C34951","UMLS:C0033300"],"synonyms":[{"name":"HGPS","type":"exact"},{"name":"Hutchinson Gilford progeria syndrome","type":"related"},{"name":"Hutchinson Gilford syndrome","type":"exact"},{"name":"Hutchinson-Gilford disease","type":"exact"},{"name":"Hutchinson-Gilford progeria","type":"exact"},{"name":"Hutchinson-Gilford progeria syndrome","type":"exact"},{"name":"premature senility syndrome","type":"exact"},{"name":"progeria","type":"broad"},{"name":"progeria syndrome, childhood-onset","type":"related"}],"termid":"MONDO:0008310","xrefs":{"Monarch":{"xref_id":"0008310"}}}


id: MONDO:0022921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short stature-microcephaly-heart defect syndrome (obsolete MONDO:0022921)","secondary_identifiers":["Orphanet:2861"],"synonyms":[{"name":"d'ercole syndrome","type":"related"},{"name":"short stature microcephaly heart defect","type":"related"}],"termid":"MONDO:0022921","xrefs":{"Monarch":{"xref_id":"0022921"}}}


id: FYPO:0004495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, has more than one septum, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable branched, elongated, multiseptate vegetative cell","termid":"FYPO:0003413"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"},{"relation_name":"is_a","term_name":"inviable swollen elongated multiseptate vegetative cell","termid":"FYPO:0006946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"inviable branched, swollen, elongated, multiseptate vegetative cell","synonyms":[{"name":"inviable branched, elongated, swollen, multiseptate vegetative cell","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; branched, swollen, elongated, multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0004495"}


id: MONDO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, acquired, eye disease characterized by unilateral (rarely bilateral) abnormally dilated and tortuous capillaries around the fovea, associated with multiple arteriolar and venular aneurysms, lipid depositions, and intra-retinal cystoid degeneration. It leads to vision loss due to macular edema with hard exudates.","definition_xrefs":["Orphanet:353344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic macular telangiectasia type 1","secondary_identifiers":["MEDGEN:1653394","ICD10CM:H35.5","GARD:21531","UMLS:C4751437"],"synonyms":[{"name":"aneurysmal telangiectasia","type":"exact"},{"name":"visible and exudative idiopathic juxtafoveolar retinal telangiectasis","type":"exact"}],"termid":"MONDO:0018146","xrefs":{"Monarch":{"xref_id":"0018146"}}}


id: PBO:0072808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMD4A antisense RNA 1","termid":"PBO:0072808"}


id: MOD:01377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a (2S,3R,4S)-4-hydroxyisoleucine.","definition_xrefs":["PubMed:363352","RESID:AA0448","ChEBI:141844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated isoleucine","termid":"MOD:01415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4S)-4-hydroxyisoleucine","synonyms":[{"name":"(2S,3R,4S)-2-amino-3-methyl-4-hydroxyvaleric acid","type":"exact"},{"name":"(2S,3R,4S)-2-amino-4-hydroxy-3-methylpentanoic acid","type":"exact"},{"name":"(2S,3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"(3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"MOD_RES (3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"gamma-hydroxyisoleucine","type":"exact"}],"termid":"MOD:01377"}


id: GO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-cysteine to form S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-phospho-L-cysteine (obsolete GO:0018325)","termid":"GO:0018325"}


id: PBO:0045130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication helicase/nuclease 2","termid":"PBO:0045130"}


id: PBO:0031134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_oxidative_stress","termid":"PBO:0031134"}


id: GO:0061441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a renal artery is generated and organized. Renal arteries supply the kidneys with blood.","definition_xrefs":["PMID:11891195","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"kidney vasculature morphogenesis","termid":"GO:0061439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal artery morphogenesis","termid":"GO:0061441"}


id: PBO:0003625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mrd1 (predicted)","termid":"PBO:0003625"}


id: GO:0008563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + alpha-factor(in) = ADP + phosphate + alpha-factor(out). The export of the alpha-factor sex pheromone by an ABC-type (ATP-binding cassette-type) ATPase, characterized by the presence of two similar ATP-binding domains, that does not undergo phosphorylation during the transport process.","definition_xrefs":["EC:3.6.3.48"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor sex pheromone exporter (obsolete GO:0008563)","synonyms":[{"name":"alpha-factor sex pheromone exporter","type":"exact"},{"name":"alpha-factor-transporting ATPase","type":"related"}],"termid":"GO:0008563"}


id: GO:0061492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a protein is transported to, or maintained to either the old or new spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:dph","PMID:22119525"],"gene_count":0,"genotype_count":0,"name":"obsolete asymmetric protein localization to old or new spindle pole body (obsolete GO:0061492)","termid":"GO:0061492"}


id: MONDO:0013546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitochondrial complex deficiency characterized by early neonatal onset of hypotonia, hypetrophic cardiomyopathy and apneic spells within hours after birth accompanied by lactic acidosis, hyperammonemia and 3-methylglutaconic aciduria.","definition_xrefs":["Orphanet:1194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex V (ATP synthase) deficiency nuclear type 2","secondary_identifiers":["DOID:0060331","OMIM:614052","SCTID:718212006","UMLS:C3279699","MESH:C567528","GARD:16561","MEDGEN:481329"],"synonyms":[{"name":"3-MGCA type IV (3-MGCA-4) (formerly)","type":"related"},{"name":"MC5DN2","type":"exact"},{"name":"TMEM70 defect","type":"related"},{"name":"TMEM70-related mitochondrial encephalo-cardio-myopathy","type":"related"},{"name":"encephalocardiomyopathy, mitochondrial, neonatal, due to ATP synthase deficiency","type":"related"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, Tmem70 type","type":"related"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, nuclear type 2","type":"related"},{"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 2","type":"related"},{"name":"mitochondrial encephalo-cardio-myopathy due to F1Fo ATPase deficiency","type":"exact"},{"name":"mitochondrial encephalo-cardio-myopathy due to isolated ATP synthase deficiency","type":"exact"},{"name":"mitochondrial encephalo-cardio-myopathy due to isolated mitochondrial respiratory chain complex V deficiency","type":"exact"},{"name":"neonatal mitochondrial encephalocardiomyopathy due to ATP synthase deficiency","type":"exact"}],"termid":"MONDO:0013546","xrefs":{"Monarch":{"xref_id":"0013546"}}}


id: GO:0008635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process and is mediated by cytochrome c.","definition_xrefs":["Wikipedia:Caspase","GOC:dph","PMID:14744432","GOC:mtg_apoptosis","GOC:tb","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c (obsolete GO:0008635)","secondary_identifiers":["Reactome:R-HSA-111459"],"synonyms":[{"name":"activation of caspase activity by cytochrome c","type":"narrow"},{"name":"caspase activation via cytochrome c","type":"exact"}],"termid":"GO:0008635"}


id: PBO:0069861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1148, pseudogene","termid":"PBO:0069861"}


id: GO:0047056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydrocolumbamine + [reduced NADPH--hemoprotein reductase] + O2 -> (S)-canadine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:21456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(S)-canadine synthase activity","secondary_identifiers":["MetaCyc:1.1.3.36-RXN","EC:1.14.19.68","KEGG_REACTION:R04400"],"synonyms":[{"name":"(S)-tetrahydroberberine synthase activity","type":"related"},{"name":"(S)-tetrahydrocolumbamine oxidase (methylenedioxy-bridge-forming) activity","type":"related"}],"termid":"GO:0047056"}


id: GO:1905282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:23069713","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905282"}


id: GO:0047182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + 1-O-trans-cinnamoyl-beta-D-glucopyranose = beta-D-glucose + alkyl cinnamate.","definition_xrefs":["EC:2.3.1.152","MetaCyc:2.3.1.152-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"alcohol O-cinnamoyltransferase activity","secondary_identifiers":["RHEA:23524"],"synonyms":[{"name":"1-O-trans-cinnamoyl-beta-D-glucopyranose:alcohol O-cinnamoyltransferase activity","type":"related"}],"termid":"GO:0047182"}


id: SO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding for one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"monocistronic","termid":"SO:0000878"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"},{"relation_name":"is_a","term_name":"monocistronic_transcript","termid":"SO:0000665"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocistronic_primary_transcript","synonyms":[{"name":"monocistronic primary transcript","type":"exact"}],"termid":"SO:0000632"}


id: PBO:0063700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase","termid":"PBO:0063700"}


id: PBO:0067235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 306, pseudogene","termid":"PBO:0067235"}


id: PBO:0047400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO38 divergent transcript","termid":"PBO:0047400"}


id: GO:0016923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Ligand dependent interaction with the thyroid hormone receptor.","definition_xrefs":["PMID:7776974"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand-dependent thyroid hormone receptor interactor activity (obsolete GO:0016923)","synonyms":[{"name":"TRIP4","type":"related"},{"name":"ligand-dependent thyroid hormone receptor interactor activity","type":"exact"}],"termid":"GO:0016923"}


id: FYPO:0006425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) in centromeric regions during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion at centromere","termid":"FYPO:0004667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"normal meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"normal meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"normal sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0006425"}


id: PBO:0078128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 10","termid":"PBO:0078128"}


id: PBO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(p14)","termid":"PBO:0047884"}


id: GO:0015284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in).","definition_xrefs":["TC:2.A.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fructose uniporter activity","termid":"GO:0015284"}


id: PBO:0072854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 4","termid":"PBO:0072854"}


id: MONDO:0004102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of papillary carcinoma of the thyroid gland characterized by the presence of pseudostratified malignant follicular cells.","definition_xrefs":["NCIT:C35830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"columnar cell variant thyroid gland papillary carcinoma","secondary_identifiers":["DOID:7088","ICDO:8344/3","UMLS:C1333120","MEDGEN:272499"],"synonyms":[{"name":"columnar cell variant papillary carcinoma","type":"exact"},{"name":"columnar cell variant papillary thyroid gland carcinoma","type":"exact"},{"name":"columnar cell variant thyroid gland papillary carcinoma","type":"exact"}],"termid":"MONDO:0004102","xrefs":{"Monarch":{"xref_id":"0004102"}}}


id: PBO:0067487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 621, pseudogene","termid":"PBO:0067487"}


id: MONDO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the FLNC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 26","secondary_identifiers":["MEDGEN:934716","UMLS:C4310749","DOID:0110327","OMIM:617047"],"synonyms":[{"name":"CMH26","type":"exact"},{"name":"FLNC hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 26","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 26","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 26","type":"exact"},{"name":"cardiomyopathy, familial restrictive 5","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 5","type":"related"},{"name":"hypertrophic cardiomyopathy caused by mutation in FLNC","type":"exact"},{"name":"hypertrophic cardiomyopathy type 26","type":"exact"}],"termid":"MONDO:0014883","xrefs":{"Monarch":{"xref_id":"0014883"}}}


id: PBO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, unknown specificity","termid":"PBO:0002982"}


id: PBO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 60, pseudogene","termid":"PBO:0044399"}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: GO:1990705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cholangiocytes, resulting in the expansion of the cholangiocyte population. A cholangiocyte is an epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water.","definition_xrefs":["PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholangiocyte proliferation","synonyms":[{"name":"hepatoblast proliferation","type":"exact"}],"termid":"GO:1990705"}


id: MONDO:0017378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polymicrogyria-turricephaly-hypogenitalism syndrome (obsolete MONDO:0017378)","secondary_identifiers":["Orphanet:2925"],"termid":"MONDO:0017378","xrefs":{"Monarch":{"xref_id":"0017378"}}}


id: PBO:0038287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charge_at_ph7","termid":"PBO:0038287"}


id: PBO:0036441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex actin-like protein Arp5","termid":"PBO:0036441"}


id: GO:0050012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 juglone + O2 = 2 3,5-dihydroxy-1,4-naphthoquinone + 2 H+.","definition_xrefs":["RHEA:18745","PMID:4041238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"juglone 3-hydroxylase activity","secondary_identifiers":["EC:1.17.3.4","MetaCyc:JUGLONE-3-MONOOXYGENASE-RXN","KEGG_REACTION:R04327"],"synonyms":[{"name":"5-hydroxy-1,4-naphthoquinone,hydrogen-donor:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"juglone 3-monooxygenase activity","type":"exact"},{"name":"juglone hydroxylase activity","type":"exact"},{"name":"naphthoquinone hydroxylase activity","type":"related"}],"termid":"GO:0050012"}


id: PBO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein in S. cerevisiae, SPBC21C3.07c is related to the C-terminal region of YOR239W","termid":"PBO:0004671"}


id: SO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000767 clone_insert_start (obsolete SO:0000767)","termid":"SO:0000767"}


id: GO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type I hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type I hypersensitivity","termid":"GO:0001810"}


id: PBO:0065839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 4","termid":"PBO:0065839"}


id: GO:0019557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-histidine catabolic process to glutamate and formate","secondary_identifiers":["MetaCyc:PWY-5028"],"synonyms":[{"name":"histidine breakdown to glutamate and formate","type":"exact"},{"name":"histidine catabolic process to glutamate and formate","type":"broad"},{"name":"histidine degradation to glutamate and formate","type":"exact"}],"termid":"GO:0019557"}


id: MONDO:0014440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS12-related ciliopathy","termid":"MONDO:1040045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 12","secondary_identifiers":["GARD:10211","OMIM:615989","DOID:0110134","UMLS:C1859570","MEDGEN:347910","MESH:C565921"],"synonyms":[{"name":"BBS12","type":"exact"},{"name":"BBS12 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 12","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS12","type":"exact"},{"name":"Bardet-Biedl syndrome type 12","type":"exact"}],"termid":"MONDO:0014440","xrefs":{"Monarch":{"xref_id":"0014440"}}}


id: PBO:0040164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated metabolic related lncRNA 2","termid":"PBO:0040164"}


id: PR:O13745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.11c","synonyms":[{"name":"RNA polymerase II transcription factor B 73 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p73 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tfb1","type":"exact"}],"termid":"PR:O13745"}


id: MONDO:0017750
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  {"annotated_genes":["SJAG_01071","SJAG_00041","SJAG_03158","SJAG_03054","SJAG_02211","SJAG_00578"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012637"},{"annotations":[87931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013281"},{"annotations":[88797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013325"},{"annotations":[88196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013810"},{"annotations":[88692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012635"},{"annotations":[88641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054559"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00578":null,"SJAG_01071":null,"SJAG_02211":null,"SJAG_03054":null,"SJAG_03158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"defect in conserved oligomeric Golgi complex","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21344","UMLS:C5679953","MEDGEN:1843352","Orphanet:309568"],"synonyms":[{"name":"defect in COG complex","type":"exact"}],"termid":"MONDO:0017750","terms_by_termid":{"MONDO:0012635":null,"MONDO:0012637":null,"MONDO:0013281":null,"MONDO:0013325":null,"MONDO:0013810":null,"MONDO:0054559":null},"xrefs":{"Monarch":{"xref_id":"0017750"}}}


id: PBO:0089734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase, involved in regulation of PPA2","termid":"PBO:0089734"}


id: GO:0120072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any pyloric antrum smooth muscle contraction.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120071"},{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"positively_regulates","term_name":"pyloric antrum smooth muscle contraction","termid":"GO:0120065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120072"}


id: GO:0070066
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains cellubrevin (VAMP3), VAMP4, endobrevin (VAMP8), and syntaxin 6 (or orthologs thereof).","definition_xrefs":["PMID:11839770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cellubrevin-VAMP4-endobrevin-syntaxin-6 complex","synonyms":[{"name":"SNARE complex (Vamp3, Vamp4, Vam8, Stx6)","type":"narrow"},{"name":"Vamp3-Vamp4-Vam8-Stx6 complex","type":"narrow"}],"termid":"GO:0070066"}


id: PBO:0057454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 573","termid":"PBO:0057454"}


id: GO:0005768
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id: GO:0042439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanolamine (2-aminoethanol) and compounds derived from it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine-containing compound metabolic process","synonyms":[{"name":"ethanolamine and derivative metabolic process","type":"exact"},{"name":"ethanolamine and derivative metabolism","type":"exact"},{"name":"ethanolamine-containing compound metabolism","type":"exact"}],"termid":"GO:0042439"}


id: PBO:0063920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase interacting protein 1","termid":"PBO:0063920"}


id: PBO:0089094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear/mitochondrial metal-dependent protein hydrolase, human MYG1 ortholog","termid":"PBO:0089094"}


id: PBO:0040989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOLA2-SMG1P6 readthrough","termid":"PBO:0040989"}


id: PBO:0082249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the mitochondrial processing protease (MPP); essential processing enzyme that cleaves the N-terminal targeting sequences from mitochondrially imported proteins","termid":"PBO:0082249"}


id: PBO:0048882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 1","termid":"PBO:0048882"}


id: FYPO:0003366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pyridoxine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pyridoxine import","termid":"FYPO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased pyridoxine import","synonyms":[{"name":"decreased pyridoxine import across plasma membrane","type":"exact"},{"name":"decreased pyridoxine import during mitotic cell cycle","type":"related"},{"name":"decreased pyridoxine import during vegetative growth","type":"exact"},{"name":"decreased pyridoxine import into cell","type":"exact"},{"name":"decreased pyridoxine uptake","type":"exact"},{"name":"reduced pyridoxine import","type":"exact"}],"termid":"FYPO:0003366"}


id: GO:1904253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"positively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of bile acid metabolic process","synonyms":[{"name":"activation of bile acid metabolic process","type":"narrow"},{"name":"activation of bile acid metabolism","type":"narrow"},{"name":"positive regulation of bile acid metabolism","type":"exact"},{"name":"up regulation of bile acid metabolic process","type":"exact"},{"name":"up regulation of bile acid metabolism","type":"exact"},{"name":"up-regulation of bile acid metabolic process","type":"exact"},{"name":"up-regulation of bile acid metabolism","type":"exact"},{"name":"upregulation of bile acid metabolic process","type":"exact"},{"name":"upregulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904253"}


id: PBO:0048430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 1","termid":"PBO:0048430"}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: MONDO:0013900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any alternating hemiplegia of childhood in which the cause of the disease is a mutation in the ATP1A3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alternating hemiplegia of childhood","termid":"MONDO:0016241"},{"relation_name":"is_a","term_name":"ATP1A3-associated neurological disorder","termid":"MONDO:0700002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"alternating hemiplegia of childhood 2","secondary_identifiers":["GARD:15845","UMLS:C3553788","MEDGEN:766702","OMIM:614820"],"synonyms":[{"name":"AHC2","type":"related"},{"name":"ATP1A3 alternating hemiplegia of childhood","type":"exact"},{"name":"alternating hemiplegia of childhood 2","type":"exact"},{"name":"alternating hemiplegia of childhood caused by mutation in ATP1A3","type":"exact"},{"name":"alternating hemiplegia of childhood type 2","type":"exact"}],"termid":"MONDO:0013900","xrefs":{"Monarch":{"xref_id":"0013900"}}}


id: GO:0016529
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.","definition_xrefs":["ISBN:0198547684","GOC:mtg_muscle","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum","termid":"GO:0005783"},{"relation_name":"part_of","term_name":"sarcoplasm","termid":"GO:0016528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"sarcoplasmic reticulum","secondary_identifiers":["GO:0008221","Wikipedia:Endoplasmic_reticulum#Sarcoplasmic_reticulum"],"termid":"GO:0016529"}


id: PBO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, implicated in vesicle-mediated transport","termid":"PBO:0008425"}


id: PBO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase (predicted)","termid":"PBO:0002057"}


id: PBO:0029069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_cellular_response_to_salt_stress","termid":"PBO:0029069"}


id: MONDO:1010299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, non-human animal","secondary_identifiers":["OMIA:000750"],"termid":"MONDO:1010299","xrefs":{"Monarch":{"xref_id":"1010299"}}}


id: GO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["PMID:11891290","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"down regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"down-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"downregulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"inhibition of long-term neuronal synaptic plasticity","type":"narrow"}],"termid":"GO:0048171"}


id: PBO:0067405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 515, pseudogene","termid":"PBO:0067405"}


id: PBO:0050819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 4","termid":"PBO:0050819"}


id: MONDO:0002868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucinous cystic neoplasm that arises from the intrahepatic or extrahepatic bile ducts and it is associated with an invasive carcinomatous component.","definition_xrefs":["NCIT:C4130"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bile duct adenocarcinoma","termid":"MONDO:0003193"},{"relation_name":"excluded_subClassOf","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"bile duct cystadenoma","termid":"MONDO:0003420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile duct mucinous cystic neoplasm with an associated invasive carcinoma","secondary_identifiers":["DOID:4075","ICDO:8161/3","MEDGEN:137737","UMLS:C0334286"],"synonyms":[{"name":"bile duct cystadenocarcinoma","type":"exact"},{"name":"bile duct cystadenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"bile duct mucinous cystic neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"biliary cystadenocarcinoma","type":"broad"},{"name":"cystadenocarcinoma of bile duct","type":"exact"},{"name":"cystadenocarcinoma of the bile duct","type":"exact"}],"termid":"MONDO:0002868","xrefs":{"Monarch":{"xref_id":"0002868"}}}


id: GO:0061117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organ growth","termid":"GO:0046621"},{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"negatively_regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart growth","termid":"GO:0061117"}


id: PBO:0088069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; removes ubiquitin from ubiquitinated proteins; controls K63 homeostasis during oxidative stress; deubiquitinates Rsp5p and is required for MVB sorting of membrane proteins; can cleave polyubiquitin and has isopeptidase activity","termid":"PBO:0088069"}


id: FYPO:0001952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of calcium ions out of a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal calcium export","termid":"FYPO:0001951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased calcium export","synonyms":[{"name":"decreased calcium efflux from cell","type":"exact"},{"name":"decreased calcium export during mitotic cell cycle","type":"related"},{"name":"decreased calcium export during vegetative growth","type":"exact"},{"name":"decreased calcium export from cell","type":"narrow"},{"name":"decreased calcium ion export","type":"exact"},{"name":"decreased cellular calcium export","type":"exact"},{"name":"reduced calcium export","type":"exact"}],"termid":"FYPO:0001952"}


id: GO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stereocilia link that is formed by a fine filament running more or less vertically upward from the tip of each shorter stereocilium to attach at a higher point on its adjacent taller neighbor. Tilting the bundle puts tension on the filaments, which pull on mechanically gated ion channels in the membrane of the stereocilia.","definition_xrefs":["PMID:1108787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia coupling link","termid":"GO:0002139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia tip link","termid":"GO:0002140"}


id: PBO:0119982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3148","termid":"PBO:0119982"}


id: MONDO:0037748
data:
  {"annotated_genes":["SJAG_01072","SJAG_04785","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88250,88249,88248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","definition":"An elevated concentration of lipoproteins.","definition_xrefs":["NCIT:C34709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperlipoproteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0010980","MESH:D006951","UMLS:C0020476","MEDGEN:9363"],"synonyms":[{"name":"hyperlipoproteinemia","type":"exact"}],"termid":"MONDO:0037748","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0037748"}}}


id: MONDO:0956971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by severity with symptoms two or fewer days per week, nighttime awakenings two or fewer times per month, use of short-acting beta agonist for symptom control two or fewer days per week and no interference with normal activity.","definition_xrefs":["DOID:0080812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent asthma","secondary_identifiers":["MEDGEN:740576","UMLS:C1740754"],"termid":"MONDO:0956971","xrefs":{"Monarch":{"xref_id":"0956971"}}}


id: MONDO:0019219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of biogenic amine metabolism and transport","termid":"MONDO:0019250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of neurotransmitter metabolism and transport","secondary_identifiers":["Orphanet:79169","GARD:18950","MEDGEN:1842206","UMLS:C5681289"],"synonyms":[{"name":"disorder of neurotransmitter metabolism and transport","type":"related"}],"termid":"MONDO:0019219","xrefs":{"Monarch":{"xref_id":"0019219"}}}


id: PBO:0015223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II alpha subunit Gls2","termid":"PBO:0015223"}


id: PBO:0055629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3068","termid":"PBO:0055629"}


id: PBO:0111892
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain","termid":"PBO:0111892"}


id: PBO:0015670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3106","termid":"PBO:0015670"}


id: MONDO:0010262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotonia, congenital nystagmus, ataxia, and abnormal auditory brainstem responses","secondary_identifiers":["MEDGEN:373521","UMLS:C1970936","MESH:C537159","OMIM:300184"],"synonyms":[{"name":"hypotonia, congenital nystagmus, ataxia and abnormal auditory brainstem response","type":"related"},{"name":"hypotonia, congenital nystagmus, ataxia, and abnormal auditory brainstem responses","type":"exact"}],"termid":"MONDO:0010262","xrefs":{"Monarch":{"xref_id":"0010262"}}}


id: PBO:0065637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 12","termid":"PBO:0065637"}


id: MONDO:0007306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated Klippel-Feil syndrome in which the cause of the disease is a mutation in the GDF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klippel-Feil syndrome 1, autosomal dominant","secondary_identifiers":["NORD:1336","UMLS:C1861689","DOID:0080589","GARD:15049","OMIM:118100","MEDGEN:396196","MESH:C536887"],"synonyms":[{"name":"GDF6 isolated Klippel-Feil syndrome","type":"exact"},{"name":"KFS1","type":"related"},{"name":"Kfs","type":"related"},{"name":"Klippel-FEIL syndrome 1, autosomal dominant","type":"related"},{"name":"Klippel-Feil Syndrome","type":"broad"},{"name":"Klippel-Feil syndrome 1, autosomal dominant","type":"exact"},{"name":"cervical vertebral fusion, autosomal dominant","type":"related"},{"name":"isolated Klippel-Feil syndrome caused by mutation in GDF6","type":"exact"}],"termid":"MONDO:0007306","xrefs":{"Monarch":{"xref_id":"0007306"}}}


id: FYECO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using nonpermissive temperature and subsequently released from the block.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature block and release","termid":"FYECO:0000291"}


id: GO:0019959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine binding","termid":"GO:0019958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-8 binding","synonyms":[{"name":"IL-8 binding","type":"exact"}],"termid":"GO:0019959"}


id: MONDO:0004262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifocal neoplastic process characterized by the proliferation of spindle to cuboidal myoepithelial cells within and/or around small breast ducts.","definition_xrefs":["NCIT:C40385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast myoepithelial tumor","termid":"MONDO:0002483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast myoepitheliosis","secondary_identifiers":["UMLS:C1513799","DOID:7521","MEDGEN:269362"],"synonyms":[{"name":"breast myoepitheliosis","type":"exact"}],"termid":"MONDO:0004262","xrefs":{"Monarch":{"xref_id":"0004262"}}}


id: RO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction).","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_developmental_potential_involving","termid":"RO:0002384"}


id: MONDO:0005660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with viruses of the genus avulavirus, family paramyxoviridae. This includes newcastle disease and other infections of domestic fowl.","definition_xrefs":["MESH:D045463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Avulavirus infectious disease","secondary_identifiers":["UMLS:C1258034","MEDGEN:226249"],"termid":"MONDO:0005660","xrefs":{"Monarch":{"xref_id":"0005660"}}}


id: PBO:0079968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 6","termid":"PBO:0079968"}


id: GO:0051823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synapse structural plasticity. Synapse structural plasticity is a type of cytoskeletal remodeling; this remodeling is induced by stimuli that can lead to long term potentiation and it can be activity-dependent or -independent. Examples of cytoskeletal changes include the formation of new spines and increase in spine size; this can be accompanied by the insertion of greater numbers of glutamate (or other neurotransmitter) receptors into the post-synaptic membrane.","definition_xrefs":["PMID:11063967","PMID:14976517","PMID:9884123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structural plasticity","synonyms":[{"name":"regulation of synaptic structural plasticity","type":"exact"}],"termid":"GO:0051823"}


id: PBO:0113221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; interacts with the UBA domain of mRNA export factor Mex67p; participates in the export of Msn2/4 stress-dependent mRNAs; partially redundant function with paralog PES4 in the steady-state expression, translational timing and localization of a subset of Ndt80-dependent mRNAs that are protected until translated near the end of meiosis II; redundant role with PES4 in sporulation; shuttles between the nucleus and cytoplasm, localizes to stress granules and the prospore membrane","termid":"PBO:0113221"}


id: PBO:0083015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defining member of the SET3 histone deacetylase complex; which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains; SET3 has a paralog, SET4, that arose from the whole genome duplication","termid":"PBO:0083015"}


id: GO:1905331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:25745997","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"negatively_regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of morphogenesis of an epithelium","synonyms":[{"name":"down regulation of epithelium morphogenesis","type":"exact"},{"name":"down regulation of morphogenesis of an epithelium","type":"exact"},{"name":"down-regulation of epithelium morphogenesis","type":"exact"},{"name":"down-regulation of morphogenesis of an epithelium","type":"exact"},{"name":"downregulation of epithelium morphogenesis","type":"exact"},{"name":"downregulation of morphogenesis of an epithelium","type":"exact"},{"name":"inhibition of epithelium morphogenesis","type":"narrow"},{"name":"inhibition of morphogenesis of an epithelium","type":"narrow"},{"name":"negative regulation of epithelium morphogenesis","type":"exact"}],"termid":"GO:1905331"}


id: PBO:0041474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 54","termid":"PBO:0041474"}


id: PBO:0031602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_S_phase","termid":"PBO:0031602"}


id: GO:0030118
data:
  {"annotated_genes":["SJAG_00379","SJAG_01809","SJAG_04565","SJAG_04931","SJAG_02282","SJAG_04517","SJAG_01167","SJAG_02805","SJAG_00104","SJAG_04609","SJAG_02177","SJAG_04644","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62726,114620,79315,114832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[79959,110149,58581,76140],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[64476],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030131"},{"annotations":[66540,58991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"},{"annotations":[78546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071439"},{"annotations":[81472,75509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030125"}]},"cv_name":"cellular_component","definition":"A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes.","definition_xrefs":["PMID:11252894","PMID:9531549","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane coat","termid":"GO:0030117"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"clathrin coat","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao879919129","Wikipedia:Clathrin","GO:0016190"],"synonyms":[{"name":"clathrin cage","type":"exact"}],"termid":"GO:0030118","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030131":null,"GO:0071439":null}}


id: PBO:0056864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICA antisense RNA 1","termid":"PBO:0056864"}


id: PBO:0066259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 2","termid":"PBO:0066259"}


id: PBO:0018017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor Ncb2 (predicted)","termid":"PBO:0018017"}


id: PBO:0053354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 251","termid":"PBO:0053354"}


id: MONDO:1012387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile with age-dependent emphysema hypotrichosis, non-human animal","termid":"MONDO:1011753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile with age-dependent emphysema hypotrichosis, pig","secondary_identifiers":["OMIA:001458-9823"],"termid":"MONDO:1012387","xrefs":{"Monarch":{"xref_id":"1012387"}}}


id: PBO:0069672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 949, pseudogene","termid":"PBO:0069672"}


id: MONDO:0017000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X chromosome number anomaly with female phenotype (obsolete MONDO:0017000)","secondary_identifiers":["Orphanet:263717"],"termid":"MONDO:0017000","xrefs":{"Monarch":{"xref_id":"0017000"}}}


id: PBO:0116295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor, activator; role in adjustment to osmotic stress including modulation of mating efficiency; involved in repression of hypoxic genes by Rox1p, repression of several DAN/TIR genes during aerobic growth, ergosterol biosynthetic genes in response to hyperosmotic stress; contributes to recruitment of Tup1p-Cyc8p general repressor to promoters; relocalizes to cytosol under hypoxia; ethanol stress increases the frequency of [MOT3+] formation, while hypoxia eliminates [MOT3+]","termid":"PBO:0116295"}


id: GO:0030126
data:
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id: PBO:0081032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12A","termid":"PBO:0081032"}


id: GO:2000702
data:
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id: GO:0032153
data:
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id: PBO:0090771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex beta subunit Apl2","termid":"PBO:0090771"}


id: FYPO:0004018
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from NADH to ubiquinone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular respiration","termid":"FYPO:0000566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"normal NADH cytochrome c oxidoreductase","type":"related"},{"name":"normal NADH dehydrogenase (quinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"normal mitochondrial electron transport, NADH to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial electron transport, NADH to ubiquinone, during vegetative growth","type":"exact"}],"termid":"FYPO:0004018"}


id: MONDO:0024331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm that arises from the colon or rectum and invades through the muscularis mucosa into the submucosa. The vast majority are adenocarcinomas.","definition_xrefs":["NCIT:C2955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal carcinoma","secondary_identifiers":["EFO:1001951","UMLS:C0009402","DOID:0080199","MEDGEN:3170"],"synonyms":[{"name":"CRC","type":"exact"},{"name":"cancer of large bowel","type":"broad"},{"name":"cancer of large intestine","type":"broad"},{"name":"cancer of the large bowel","type":"broad"},{"name":"cancer of the large intestine","type":"broad"},{"name":"carcinoma of colorectum","type":"exact"},{"name":"carcinoma of large bowel","type":"exact"},{"name":"carcinoma of large intestine","type":"exact"},{"name":"carcinoma of the large bowel","type":"exact"},{"name":"carcinoma of the large intestine","type":"exact"},{"name":"colorectal (colon or rectal) cancer","type":"broad"},{"name":"colorectal cancer","type":"broad"},{"name":"colorectal carcinoma","type":"exact"},{"name":"colorectum carcinoma","type":"exact"},{"name":"large bowel cancer","type":"broad"},{"name":"large bowel carcinoma","type":"exact"},{"name":"large intestine cancer","type":"broad"},{"name":"large intestine carcinoma","type":"exact"}],"termid":"MONDO:0024331","xrefs":{"Monarch":{"xref_id":"0024331"}}}


id: PBO:0003255
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf2","termid":"PBO:0003255"}


id: PBO:0070535
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a","termid":"PBO:0070535"}


id: PBO:0027151
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_proline_level","termid":"PBO:0027151"}


id: GO:0051955
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  {"annotated_genes":["SJAG_03591","SJAG_05346","SJAG_03970","SJAG_02605","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[112367,95102,100662,93518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[95103,100663,93519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051955","terms_by_termid":{"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0019507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridine, a nitrogenous base (C5H5N) obtained from the distillation of bone oil or coal tar, and by the decomposition of certain alkaloids, as a colorless liquid with a peculiar pungent odor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine metabolic process","synonyms":[{"name":"pyridine metabolism","type":"exact"}],"termid":"GO:0019507"}


id: FYPO:0005815
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the perinuclear region of the cytoplasm is abnormal during mitotic nuclear division.","definition_xrefs":["GO:1905719","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to perinuclear region of cytoplasm during mitotic interphase","synonyms":[{"name":"abnormal protein localisation to perinuclear region of cytoplasm during mitotic interphase","type":"exact"},{"name":"abnormal protein localization to perinuclear region of cytoplasm during interphase during vegetative growth","type":"exact"},{"name":"abnormal protein localization to perinuclear region of cytoplasm during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localisation to nuclear region during mitotic interphase","type":"related"},{"name":"protein localization to nuclear region during mitotic interphase","type":"related"}],"termid":"FYPO:0005815"}


id: SO:0001322
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7_aminomethyl_7_deazaguanosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_aminomethyl_seven_deazaguanosine","secondary_identifiers":["RNAMOD:048"],"synonyms":[{"name":"7-aminomethyl-7-deazaguanosine","type":"exact"},{"name":"preQ1","type":"exact"},{"name":"seven aminomethyl seven deazaguanosine","type":"exact"}],"termid":"SO:0001322"}


id: MONDO:0019661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pfeiffer syndrome type 3 (PS3) is a severe type of Pfeiffer syndrome (PS), characterized by bicoronal craniosynostosis, severe associated functional disorders, and hand, foot and elbow abnormalities.","definition_xrefs":["Orphanet:93260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pfeiffer syndrome","termid":"MONDO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Pfeiffer syndrome type 3","secondary_identifiers":["UMLS:C5438850","MEDGEN:1748161","icd11.foundation:1910513449","GARD:16809"],"termid":"MONDO:0019661","xrefs":{"Monarch":{"xref_id":"0019661"}}}


id: PBO:0086634
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; proposed to be involved in resistance to streptozotocin and camptothecin","termid":"PBO:0086634"}


id: PR:Q10408
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.03","synonyms":[{"name":"Spom972h-sro7","type":"exact"}],"termid":"PR:Q10408"}


id: PBO:0057274
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-497-195 cluster host gene","termid":"PBO:0057274"}


id: SO:1001259
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by similarity to EST or cDNA data.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_EST_or_cDNA","termid":"SO:0000909"},{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_EST_or_cDNA_data","synonyms":[{"name":"CDS supported by EST or cDNA data","type":"exact"}],"termid":"SO:1001259"}


id: GO:0035919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a low voltage-gated calcium channel in another organism. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:bf","GOC:fj","PMID:20920515","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low voltage-gated calcium channel activity in another organism (obsolete GO:0035919)","synonyms":[{"name":"down-regulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of low voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of low voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035919"}


id: GO:1903681
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell-cell adhesion involved in epithelium migration.","definition_xrefs":["GOC:als","GO_REF:0000058","PMID:18394891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:0090137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of epithelial cell-cell adhesion involved in epithelium migration","termid":"GO:1903681"}


id: GO:0002712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell mediated immunity","synonyms":[{"name":"regulation of B lymphocyte mediated immunity","type":"exact"},{"name":"regulation of B-cell mediated immunity","type":"exact"},{"name":"regulation of B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002712"}


id: CHEBI:168396
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycophenolic acid","termid":"CHEBI:168396"}


id: PBO:0054892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2306","termid":"PBO:0054892"}


id: PBO:0076801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 2","termid":"PBO:0076801"}


id: GO:0004549
data:
  {"annotated_genes":["SJAG_03328","SJAG_03796","SJAG_00997","SJAG_00306","SJAG_00754","SJAG_04916","SJAG_04907","SJAG_02553","SJAG_03234","SJAG_04582","SJAG_01260","SJAG_00955","SJAG_01623","SJAG_04885","SJAG_06613"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82097,71746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[117150,64473,60950,70086,72901,98573,96489,103853,106362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[73145,119529,74582,80661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in tRNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_00997":null,"SJAG_01260":null,"SJAG_01623":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04885":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696813","Reactome:R-HSA-5696815","Reactome:R-HSA-6785722","Reactome:R-HSA-6786854"],"synonyms":[{"name":"tRNA-specific RNase activity","type":"exact"}],"termid":"GO:0004549","terms_by_termid":{"GO:0000213":null,"GO:0004526":null,"GO:0042781":null}}


id: MONDO:0859273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver disease, severe congenital","secondary_identifiers":["UMLS:C5774195","MEDGEN:1823968","OMIM:619991"],"termid":"MONDO:0859273","xrefs":{"Monarch":{"xref_id":"0859273"}}}


id: PBO:0070784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 14","termid":"PBO:0070784"}


id: PBO:0042973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 1","termid":"PBO:0042973"}


id: MONDO:0014063
data:
  {"annotated_genes":["SJAG_00354"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86866],"is_not":false,"summary":null,"term":"MONDO:0014063"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the TTC19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:767519","GARD:15910","UMLS:C3554605","DOID:0060351","OMIM:615157"],"synonyms":[{"name":"MC3DN2","type":"exact"},{"name":"TTC19 mitochondrial complex III deficiency","type":"exact"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 2","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in TTC19","type":"exact"},{"name":"mitochondrial complex III deficiency nuclear type 2","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 2","type":"related"}],"termid":"MONDO:0014063","terms_by_termid":{"MONDO:0014063":null},"xrefs":{"Monarch":{"xref_id":"0014063"}}}


id: PBO:0074743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 103","termid":"PBO:0074743"}


id: PBO:0003919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mc 1","termid":"PBO:0003919"}


id: GO:0046082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-methylcytosine biosynthetic process (obsolete GO:0046082)","synonyms":[{"name":"5-methylcytosine anabolism","type":"exact"},{"name":"5-methylcytosine biosynthesis","type":"exact"},{"name":"5-methylcytosine formation","type":"exact"},{"name":"5-methylcytosine synthesis","type":"exact"}],"termid":"GO:0046082"}


id: MONDO:0100270
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0019053","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX19 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX19 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX19 defect","type":"exact"}],"termid":"MONDO:0100270","terms_by_termid":{"MONDO:0013951":null},"xrefs":{"Monarch":{"xref_id":"0100270"}}}


id: PATO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having sensitivity toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive toward","synonyms":[{"name":"sensitive","type":"exact"}],"termid":"PATO:0000516"}


id: PBO:0082474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk2p; localizes to P-bodies during stationary phase; TPK3 has a paralog, TPK1, that arose from the whole genome duplication","termid":"PBO:0082474"}


id: PBO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle","termid":"PBO:0031488"}


id: PBO:0111812
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2HC5 type","termid":"PBO:0111812"}


id: GO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caloric restriction, insufficient food energy intake.","definition_xrefs":["GOC:dph","PMID:15520862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to caloric restriction","termid":"GO:0061771"}


id: GO:0044294
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing nerve cell dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth cone","termid":"GO:0030426"},{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic growth cone","secondary_identifiers":["NIF_Subcellular:sao1594955670"],"synonyms":[{"name":"dendrite growth cone","type":"exact"}],"termid":"GO:0044294"}


id: PBO:0083750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress","termid":"PBO:0083750"}


id: GO:0032280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that lacks an electron dense postsynaptic specialization. In vertebtrates, these occur primarily on dendrite shafts and neuronal cell bodies and involve persynapses containing clusters of predominantly flattened or elongated vesicles and are typically inhibitory.","definition_xrefs":["GOC:ef","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symmetric synapse","synonyms":[{"name":"Gray's type II synapse","type":"exact"}],"termid":"GO:0032280"}


id: PR:Q9UT37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00691","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.06","secondary_identifiers":["UniProtKB:Q9UT37"],"synonyms":[{"name":"Spom972h-DNAJC15","type":"exact"},{"name":"presequence translocated-associated motor subunit pam18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT37"}


id: PBO:0038384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_connecting_branch","termid":"PBO:0038384"}


id: PBO:0046841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 14","termid":"PBO:0046841"}


id: FYPO:0007286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the late endosome membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:12868054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to late endosome","termid":"FYPO:0007725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to late endosome membrane","synonyms":[{"name":"normal protein localisation to late endosome membrane","type":"exact"},{"name":"normal protein localization to late endosome membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to late endosome membrane during vegetative growth","type":"exact"},{"name":"normal protein localization to prevacuolar compartment membrane","type":"exact"}],"termid":"FYPO:0007286"}


id: PBO:0042863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 95","termid":"PBO:0042863"}


id: PBO:0062183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 3 pseudogene","termid":"PBO:0062183"}


id: PBO:0041647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit alpha2delta 2","termid":"PBO:0041647"}


id: PBO:0074688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68","termid":"PBO:0074688"}


id: PBO:0055162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2582","termid":"PBO:0055162"}


id: GO:0007095
data:
  {"annotated_genes":["SJAG_01680","SJAG_01873","SJAG_01205","SJAG_01146","SJAG_00640","SJAG_02266","SJAG_00364","SJAG_02576","SJAG_02098","SJAG_02771","SJAG_04671","SJAG_02563","SJAG_05373","SJAG_01429","SJAG_03942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60754,61463,62287,67758,74015,76937,81091,90892,93203,101142,102841,108430,111139,113561,118865],"is_not":false,"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle checkpoint that detects and negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:16299494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"},{"relation_name":"is_a","term_name":"mitotic G2/M transition checkpoint","termid":"GO:0044818"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03942":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0072434","GO:0031572","GO:1902505","GO:1902506","GO:0072425","GO:1902504"],"synonyms":[{"name":"G2 DNA damage checkpoint","type":"related"},{"name":"G2/M transition DNA damage checkpoint","type":"exact"},{"name":"down regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"down regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"down-regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"down-regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"inhibition of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"negative regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"negative regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"positive regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"positive regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"signal transduction involved in G2 DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0007095","terms_by_termid":{"GO:0007095":null}}


