# terms

id: GO:0033218
data:
  {"annotated_genes":["SJAG_05181","SJAG_03690","SJAG_01351","SJAG_04031","SJAG_00869","SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097001"},{"annotations":[72142,101057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043295"},{"annotations":[77606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"},{"annotations":[59552,65921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031177"}]},"cv_name":"molecular_function","definition":"Binding to an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00869":null,"SJAG_01351":null,"SJAG_01458":null,"SJAG_03690":null,"SJAG_04031":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"amide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033218","terms_by_termid":{"GO:0031177":null,"GO:0036042":null,"GO:0043295":null,"GO:0097001":null}}


id: GO:0007080
data:
  {"annotated_genes":["SJAG_04884","SJAG_03217","SJAG_02624","SJAG_01297","SJAG_00768","SJAG_03327","SJAG_02336","SJAG_02451","SJAG_01601","SJAG_05319","SJAG_01775","SJAG_05220","SJAG_02045","SJAG_00418","SJAG_03540","SJAG_04259","SJAG_00082","SJAG_04140","SJAG_01211","SJAG_04076","SJAG_04412","SJAG_02731","SJAG_00918","SJAG_00335","SJAG_00207","SJAG_01613","SJAG_00302","SJAG_01278","SJAG_02346","SJAG_03989","SJAG_03437","SJAG_02286","SJAG_01082","SJAG_03543","SJAG_01837","SJAG_03220","SJAG_02761","SJAG_04040","SJAG_01224","SJAG_00646","SJAG_01370","SJAG_00678","SJAG_00930","SJAG_03048","SJAG_05266","SJAG_01805","SJAG_01371","SJAG_04745","SJAG_04623","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112138,112184,113515,99687,89769,74622,97341,118368,92762,77403,91811,93155,107278,102166,66661,73696,89522,70113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[110071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[111729,96552],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[105691,95970,101011,110075,100404],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[111715,110705,115066,95971,114457,114458,91520,104233,90913,120559,92750,110076,100406,79676,105692,64562,91134,109319,100906,95607,105340,118761,102311,116339,115935],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[91773,104179,113033,95581,118522],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during mitotic chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase chromosome alignment","termid":"GO:0051310"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0007080","terms_by_termid":{"GO:0051315":null,"GO:0099606":null,"GO:0099607":null,"GO:0140429":null,"GO:1990758":null,"GO:1990942":null}}


id: GO:0018331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-serine to form O-phospho-L-serine.","definition_xrefs":["RESID:AA0037"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-phospho-L-serine (obsolete GO:0018331)","termid":"GO:0018331"}


id: GO:0035065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of an acetyl group to a histone protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone acetylation (obsolete GO:0035065)","termid":"GO:0035065"}


id: GO:0051402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.","definition_xrefs":["GOC:mtg_apoptosis","CL:0000540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron apoptotic process","synonyms":[{"name":"apoptosis of neuronal cells","type":"exact"},{"name":"apoptosis of neurons","type":"exact"},{"name":"neuron apoptosis","type":"narrow"},{"name":"neuron programmed cell death by apoptosis","type":"exact"},{"name":"neuronal cell apoptosis","type":"exact"},{"name":"neuronal cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of neuronal cells by apoptosis","type":"exact"},{"name":"programmed cell death of neurons by apoptosis","type":"exact"},{"name":"programmed cell death, neuronal cells","type":"exact"},{"name":"programmed cell death, neurons","type":"exact"}],"termid":"GO:0051402"}


id: PATO:0000029
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000029 protein composition (obsolete PATO:0000029)","termid":"PATO:0000029"}


id: PBO:0084134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity, broad selectivity, nucleoside/nucleobase transporter; vacuolar membrane localized transporter which may regulate the balance of nicotinamide riboside (NmR) levels between the cytosol and vacuole, contributing to salvage of NmR for use in cytosolic NAD+ synthesis; equilibrative nucleoside transporter (ENT) family member","termid":"PBO:0084134"}


id: MONDO:1010672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary macrothrombocytes and mild-to-moderate thrombocytopenia with a bleeding tendency in dogs due to a variation in the GP9 gene.","definition_xrefs":["PMID:31484196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"thrombopathia, dog","termid":"MONDO:1012273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bernard-Soulier syndrome, GP9-related, dog","secondary_identifiers":["OMIA:002207-9615"],"synonyms":[{"name":"Bernard-Soulier syndrome type C, dog","type":"related"},{"name":"hemorrhagiparous thrombocytic dystrophy, dog","type":"exact"}],"termid":"MONDO:1010672","xrefs":{"Monarch":{"xref_id":"1010672"}}}


id: GO:0080107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-methylthiopropyl-glucosinolate = 8-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"8-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080107"}


id: GO:2000757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein acetylation","termid":"GO:1901984"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"negatively_regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-lysine acetylation","termid":"GO:2000757"}


id: GO:1902584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to water deprivation.","definition_xrefs":["GOC:TermGenie","PMID:24198318","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to water deprivation","termid":"GO:2000070"},{"relation_name":"positively_regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to water deprivation","synonyms":[{"name":"activation of drought tolerance","type":"related"},{"name":"activation of response to dehydration","type":"narrow"},{"name":"activation of response to drought","type":"narrow"},{"name":"activation of response to thirst","type":"narrow"},{"name":"activation of response to water deprivation","type":"narrow"},{"name":"positive regulation of drought tolerance","type":"related"},{"name":"positive regulation of response to dehydration","type":"exact"},{"name":"positive regulation of response to drought","type":"exact"},{"name":"positive regulation of response to thirst","type":"exact"},{"name":"up regulation of drought tolerance","type":"related"},{"name":"up regulation of response to dehydration","type":"exact"},{"name":"up regulation of response to drought","type":"exact"},{"name":"up regulation of response to thirst","type":"exact"},{"name":"up regulation of response to water deprivation","type":"exact"},{"name":"up-regulation of drought tolerance","type":"related"},{"name":"up-regulation of response to dehydration","type":"exact"},{"name":"up-regulation of response to drought","type":"exact"},{"name":"up-regulation of response to thirst","type":"exact"},{"name":"up-regulation of response to water deprivation","type":"exact"},{"name":"upregulation of drought tolerance","type":"related"},{"name":"upregulation of response to dehydration","type":"exact"},{"name":"upregulation of response to drought","type":"exact"},{"name":"upregulation of response to thirst","type":"exact"},{"name":"upregulation of response to water deprivation","type":"exact"}],"termid":"GO:1902584"}


id: MONDO:0009419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Woodhouse-Sakati syndrome is a multisystemic disorder characterized by hypogonadism, alopecia, diabetes mellitus, intellectual deficit and extrapyramidal signs with choreoathetoid movements and dystonia.","definition_xrefs":["Orphanet:3464"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0003441","MONDO:0005066"],"is_obsolete":false,"name":"Woodhouse-Sakati syndrome","secondary_identifiers":["MESH:C536742","GARD:5592","ICD9:759.89","MEDGEN:83337","OMIM:241080","DOID:0112264","icd11.foundation:1893572805","SCTID:237616002","UMLS:C0342286"],"synonyms":[{"name":"Woodhouse-Sakati syndrome","type":"exact"},{"name":"diabetes-hypogonadism-deafness-intellectual disability syndrome","type":"exact"},{"name":"extrapyramidal disorder, progressive, with primary hypogonadism, intellectual disability, and alopecia","type":"related"},{"name":"extrapyramidal disorder, progressive, with primary hypogonadism, mental retardation, and alopecia","type":"related"},{"name":"hypogonadism, alopecia, diabetes mellitus, intellectual disability, deafness, and extrapyramidal syndrome","type":"related"},{"name":"hypogonadism, alopecia, diabetes mellitus, mental retardation, deafness, and extrapyramidal syndrome","type":"related"},{"name":"hypogonadism, diabetes mellitus, alopecia, intellectual disability, and electrocardiographic abnormalities","type":"related"},{"name":"hypogonadism, diabetes mellitus, alopecia, mental retardation, and electrocardiographic abnormalities","type":"related"},{"name":"woodhouse Sakati syndrome","type":"related"},{"name":"woodhouse-Sakati syndrome","type":"exact"}],"termid":"MONDO:0009419","xrefs":{"Monarch":{"xref_id":"0009419"}}}


id: MONDO:0013108
data:
  {"annotated_genes":["SJAG_00640","SJAG_01013","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87264,87265,87266],"is_not":false,"summary":null,"term":"MONDO:0013108"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01013":null,"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute lymphocytic, susceptibility to, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:442767","OMIM:613065","UMLS:C2751595"],"synonyms":[{"name":"ALL","type":"related"},{"name":"All1","type":"related"},{"name":"T-cell acute lymphoblastic leukemia, somatic","type":"exact"},{"name":"leukemia, B-cell acute lymphoblastic, susceptibility to","type":"related"},{"name":"leukemia, T-cell acute lymphoblastic, somatic","type":"exact"},{"name":"leukemia, T-cell acute lymphoblastic, susceptibility to","type":"related"},{"name":"leukemia, T-cell acute lymphocytic, somatic","type":"exact"},{"name":"leukemia, acute lymphoblastic","type":"related"},{"name":"leukemia, acute lymphoblastic, B-Hyperdiploid, susceptibility to","type":"related"},{"name":"leukemia, acute lymphoblastic, somatic","type":"exact"},{"name":"leukemia, acute lymphoblastic, susceptibility to, 1","type":"related"},{"name":"leukemia, acute lymphocytic, Philadelphia chromosome positive, somatic","type":"exact"},{"name":"leukemia, acute lymphocytic, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0013108","terms_by_termid":{"MONDO:0013108":null},"xrefs":{"Monarch":{"xref_id":"0013108"}}}


id: PR:Q9Y7T4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7T4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase atg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.08c","synonyms":[{"name":"Spom972h-atg1","type":"exact"},{"name":"autophagy-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine/threonine-protein kinase ppk36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7T4"}


id: GO:0052703
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105421,113369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[72612,105422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modified histidine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular histidine derivative anabolism","type":"exact"},{"name":"cellular histidine derivative biosynthesis","type":"exact"},{"name":"cellular histidine derivative biosynthetic process","type":"exact"},{"name":"cellular histidine derivative formation","type":"exact"},{"name":"cellular histidine derivative synthesis","type":"exact"},{"name":"cellular modified histidine anabolism","type":"exact"},{"name":"cellular modified histidine biosynthesis","type":"exact"},{"name":"cellular modified histidine formation","type":"exact"},{"name":"cellular modified histidine synthesis","type":"exact"},{"name":"histidine derivative biosynthetic process","type":"exact"}],"termid":"GO:0052703","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: PBO:0066941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 243","termid":"PBO:0066941"}


id: MOD:01559
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01559"}


id: GO:0002618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"},{"relation_name":"positively_regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage antigen processing and presentation","synonyms":[{"name":"activation of macrophage antigen processing and presentation","type":"narrow"},{"name":"stimulation of macrophage antigen processing and presentation","type":"narrow"},{"name":"up regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"up-regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"upregulation of macrophage antigen processing and presentation","type":"exact"}],"termid":"GO:0002618"}


id: PBO:0041898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 3","termid":"PBO:0041898"}


id: MONDO:0003172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomeruloid hemangioma","secondary_identifiers":["MEDGEN:224917","UMLS:C1304511","NCIT:C27505","SCTID:403976007","DOID:486"],"termid":"MONDO:0003172","xrefs":{"Monarch":{"xref_id":"0003172"}}}


id: MONDO:0008028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Barnes type","secondary_identifiers":["OMIM:158800","MESH:C563558","UMLS:C1834688","MEDGEN:322468"],"synonyms":[{"name":"muscular dystrophy, Barnes type","type":"exact"}],"termid":"MONDO:0008028","xrefs":{"Monarch":{"xref_id":"0008028"}}}


id: PBO:0086081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose from dolichyl phosphate-D-mannose to protein serine/threonine residues of secretory proteins; reaction is essential for cell wall rigidity; member of a family of mannosyltransferases","termid":"PBO:0086081"}


id: PATO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Surface shape that refers to the inward or outward curvature of the surface.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concavity","termid":"PATO:0002005"}


id: PBO:0031393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_asparagine","termid":"PBO:0031393"}


id: PATO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's sensitivity towards a fixed location or value where a change is observed; upper limit.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threshold","termid":"PATO:0000152"}


id: GO:0016662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","secondary_identifiers":["EC:1.7.2.-"],"termid":"GO:0016662"}


id: PBO:0067935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 237","termid":"PBO:0067935"}


id: PBO:0052841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-1","termid":"PBO:0052841"}


id: PBO:0027638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle_during_meiosis_I","termid":"PBO:0027638"}


id: MONDO:0024935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of the horny parts and of the adjacent soft structures of the feet of cattle, swine, and sheep. It is usually caused by Corynebacterium pyogenes or Bacteroides nodosus (see dichelobacter nodosus). It is also known as interdigital necrobacillosis. (From Black's Veterinary Dictionary, 18th ed)","definition_xrefs":["MESH:D005535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foot rot","synonyms":[{"name":"Rots, foot","type":"related"},{"name":"foot Rots","type":"related"},{"name":"rot, foot","type":"related"}],"termid":"MONDO:0024935","xrefs":{"Monarch":{"xref_id":"0024935"}}}


id: PBO:0074221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 5","termid":"PBO:0074221"}


id: PBO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 1","termid":"PBO:0051929"}


id: PBO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 5","termid":"PBO:0046551"}


id: PBO:0041900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACN subunit beta associated regulatory protein","termid":"PBO:0041900"}


id: GO:0015976
data:
  {"annotated_genes":["SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71691],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043609"}]},"cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbon sources and then activates genes to scavenge the last traces of the primary carbon source and to transport and metabolize alternative carbon sources such as carbon dioxide or carbonic acid. The utilization process begins when the cell or organism detects carbon levels, includes the activation of genes whose products detect, transport or metabolize carbon-containing substances, and ends when carbon is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon utilization","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0015978","Wikipedia:Heterotroph"],"synonyms":[{"name":"carbon utilization by utilization of organic compounds","type":"exact"},{"name":"heterotrophy","type":"exact"}],"termid":"GO:0015976","terms_by_termid":{"GO:0043609":null}}


id: MONDO:8000011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of chronic intestinal pseudoobstruction caused by a developmental failure of the enteric neurons to differentiate or migrate properly and manifests as a bowel obstruction.","definition_xrefs":["Orphanet:99811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal intestinal dysplasia","termid":"MONDO:0000858"},{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"},{"relation_name":"is_a","term_name":"visceral neuropathy, familial","termid":"MONDO:0023961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"visceral neuropathy, familial, 1, autosomal recessive","secondary_identifiers":["GARD:3928","MESH:C537394","UMLS:C1855733","DOID:0080679","OMIM:243180","MEDGEN:340946"],"synonyms":[{"name":"Argyrophil myenteric plexus deficiency of","type":"related"},{"name":"Argyrophil myenteric plexus, deficiency of","type":"related"},{"name":"NID A","type":"related"},{"name":"intestinal pseudoobstruction due to neuronal disease","type":"related"},{"name":"neuronal intestinal dysplasia, type a","type":"related"},{"name":"pseudoobstruction chronic idiopathic intestinal neuronal type","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, neuronal type","type":"related"},{"name":"visceral neuropathy familial","type":"related"},{"name":"visceral neuropathy, familial, autosomal recessive","type":"related"}],"termid":"MONDO:8000011","xrefs":{"Monarch":{"xref_id":"8000011"}}}


id: PBO:0082105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex6p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; induced by oleic acid and upregulated during anaerobiosis; mutations in human PEX1 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082105"}


id: GO:0072551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diferuloyl mono-(hydroxyferuloyl) spermidine + NADPH + O2 = monoferuloyl di-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072551"}


id: PBO:0018277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med4","termid":"PBO:0018277"}


id: GO:0047439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deoxy-D-manno-octulosonate = D-arabinose + pyruvate.","definition_xrefs":["EC:4.1.2.23","RHEA:23340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-deoxy-D-manno-octulosonate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01576","MetaCyc:4.1.2.23-RXN"],"synonyms":[{"name":"2-keto-3-deoxyoctonate aldolase activity","type":"related"},{"name":"2-keto-3-deoxyoctonic aldolase activity","type":"related"},{"name":"3-deoxy-D-manno-octulosonate D-arabinose-lyase (pyruvate-forming)","type":"related"},{"name":"3-deoxy-D-manno-octulosonate D-arabinose-lyase activity","type":"related"},{"name":"3-deoxy-D-manno-octulosonic aldolase activity","type":"related"},{"name":"3-deoxyoctulosonic aldolase activity","type":"related"},{"name":"KDOaldolase activity","type":"related"}],"termid":"GO:0047439"}


id: GO:1901522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in cellular response to chemical stimulus.","definition_xrefs":["PMID:22840777","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus (obsolete GO:1901522)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"}],"termid":"GO:1901522"}


id: PBO:0045346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 6","termid":"PBO:0045346"}


id: FYPO:0001546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during cellular response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to zinc","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to zinc ion","type":"narrow"},{"name":"decreased transcript level during cellular response to zinc ion","type":"exact"},{"name":"reduced RNA level during cellular response to zinc ion","type":"exact"}],"termid":"FYPO:0001546"}


id: FYPO:0002899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"normal protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0002899"}


id: PBO:0060032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 20","termid":"PBO:0060032"}


id: PBO:0063584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET100 pseudogene 1","termid":"PBO:0063584"}


id: GO:0016234
data:
  {"annotated_genes":["SJAG_01408","SJAG_03048","SJAG_00335","SJAG_04768","SJAG_00302","SJAG_03161","SJAG_04601","SJAG_00082","SJAG_03543","SJAG_04140","SJAG_03745","SJAG_00436","SJAG_04645","SJAG_00178","SJAG_00471","SJAG_01186","SJAG_04855","SJAG_03300","SJAG_01805","SJAG_04055","SJAG_04187","SJAG_01837","SJAG_01374"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106800,91762,106000,113023,114434,114435,100817,114433,94008,95567,60631,104150,113878,106094,116732,107549,89252,107184,90767,117331,92718,104066,118508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"A discrete intracellular part formed of aggregated molecules such as proteins or other biopolymers.","definition_xrefs":["GOC:mah","PMID:11121744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00436":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inclusion body","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["NIF_Subcellular:sao120573470","Wikipedia:Inclusion_bodies"],"synonyms":[{"name":"cellular inclusion","type":"related"},{"name":"neuronal cytoplasmic inclusion","type":"narrow"}],"termid":"GO:0016234","terms_by_termid":{"GO:0140602":null}}


id: PBO:0057726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-10","termid":"PBO:0057726"}


id: GO:0045735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Functions in the storage of nutritious substrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"nutrient reservoir activity","synonyms":[{"name":"storage protein","type":"related"},{"name":"storage protein of fat body","type":"related"},{"name":"yolk protein","type":"related"}],"termid":"GO:0045735"}


id: PBO:0079091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-4","termid":"PBO:0079091"}


id: MONDO:0019859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital thyroid malformation without hypothyroidism (obsolete MONDO:0019859)","secondary_identifiers":["Orphanet:95718"],"termid":"MONDO:0019859","xrefs":{"Monarch":{"xref_id":"0019859"}}}


id: MONDO:0041403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition where a toxic reaction in the optic nerve results in visual loss. Various poisonous substances may cause the condition as well as nutritional factors.","definition_xrefs":["Wikipedia:Toxic_amblyopia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"suppression amblyopia","termid":"MONDO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic amblyopia","secondary_identifiers":["SCTID:30483005","UMLS:C0237979","MEDGEN:536749"],"synonyms":[{"name":"nutritional optic neuropathy","type":"narrow"},{"name":"tobacco amblyopia","type":"narrow"}],"termid":"MONDO:0041403","xrefs":{"Monarch":{"xref_id":"0041403"}}}


id: MONDO:0030294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 3","secondary_identifiers":["OMIM:619362","MEDGEN:1780019","UMLS:C5543513"],"synonyms":[{"name":"MMIHS3","type":"exact"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 3","type":"exact"}],"termid":"MONDO:0030294","xrefs":{"Monarch":{"xref_id":"0030294"}}}


id: PBO:0041044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 1","termid":"PBO:0041044"}


id: MONDO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia with vitamin E deficiency (AVED) is a neurodegenerative disease belonging to the inherited cerebellar ataxias. It is mainly characterized by progressive spino-cerebellar ataxia, loss of proprioception, areflexia, and is associated with a marked deficiency in vitamin E.","definition_xrefs":["Orphanet:96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn vitamin metabolic disorder","termid":"MONDO:0005528"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"familial isolated deficiency of vitamin E","secondary_identifiers":["UMLS:C1848533","ICD9:269.1","DOID:0090028","GARD:8595","ICD9:334.3","OMIM:277460","MESH:C535393","MedDRA:10047631","MEDGEN:341248","NANDO:1200050","NORD:817","SCTID:702442008"],"synonyms":[{"name":"AVED","type":"exact"},{"name":"Ataxia with Vitamin E Deficiency","type":"exact"},{"name":"Friedreich-like ataxia","type":"exact"},{"name":"Friedreich-like ataxia with selective vitamin E deficiency","type":"related"},{"name":"VED","type":"related"},{"name":"ataxia with isolated vitamin E deficiency","type":"exact"},{"name":"ataxia with vitamin E deficiency","type":"related"},{"name":"ataxia, Friedreich-like, with selective vitamin E deficiency","type":"related"},{"name":"familial isolated deficiency of vitamin type E","type":"exact"},{"name":"familial isolated vitamin E deficiency","type":"exact"},{"name":"isolated vitamin E deficiency","type":"exact"},{"name":"vitamin E, familial isolated deficiency OF","type":"related"}],"termid":"MONDO:0010188","xrefs":{"Monarch":{"xref_id":"0010188"}}}


id: GO:0047792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + (S)-4-hydroxymandelonitrile = UDP + (S)-4-hydroxy-mandelonitrile beta-D-glucoside.","definition_xrefs":["EC:2.4.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cyanohydrin beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-743","RHEA:12853"],"synonyms":[{"name":"UDP-D-glucose:(S)-4-hydroxymandelonitrile beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-p-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:(S)-4-hydroxymandelonitrile beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase activity","type":"related"},{"name":"UGT85B1 activity","type":"narrow"},{"name":"cyanohydrin b-glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-cyanohydrin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-p-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose:aldehyde cyanohydrin beta-glucosyltransferase activity","type":"related"}],"termid":"GO:0047792"}


id: GO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules","termid":"GO:0016338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of calcium-independent cell-cell adhesion","termid":"GO:0051040"}


id: GO:0035216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the haltere imaginal disc over time, from its initial formation through to its metamorphosis to form the adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere disc development","termid":"GO:0035216"}


id: GO:0032684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fractalkine production","termid":"GO:0032644"},{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"negatively_regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fractalkine production","secondary_identifiers":["GO:0050753"],"synonyms":[{"name":"down regulation of fractalkine production","type":"exact"},{"name":"down-regulation of fractalkine production","type":"exact"},{"name":"downregulation of fractalkine production","type":"exact"},{"name":"inhibition of fractalkine production","type":"narrow"},{"name":"negative regulation of CX3CL1 biosynthesis","type":"narrow"},{"name":"negative regulation of CX3CL1 production","type":"exact"},{"name":"negative regulation of fractalkine biosynthetic process","type":"narrow"}],"termid":"GO:0032684"}


id: GO:0010138
data:
  {"annotated_genes":["SJAG_00533","SJAG_03708","SJAG_04709","SJAG_04354","SJAG_04713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94743,69538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[94744,93746,90219,69537,89225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The pathway by which pyrimidine bases or pyrimidine ribonucleosides from pyrimidine nucleotide breakdown are converted back to pyrimidine ribonucleotides. The salvage pathway is important where there is no de novo pyrimidine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide salvage","termid":"GO:0032262"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleotide salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0010138","terms_by_termid":{"GO:0044206":null,"GO:0044211":null}}


id: PBO:0082595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class E Vps protein of the ESCRT-III complex; required for sorting of integral membrane proteins into lumenal vesicles of multivesicular bodies, and for delivery of newly synthesized vacuolar enzymes to the vacuole, involved in endocytosis","termid":"PBO:0082595"}


id: PBO:0086831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function identified by gene-trapping; microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element","termid":"PBO:0086831"}


id: FYPO:0001543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphorus-containing substance measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phosphorus level","synonyms":[{"name":"normal cellular level of phosphorus-containing substance","type":"exact"},{"name":"normal cellular phosphorus accumulation","type":"related"},{"name":"normal cellular phosphorus level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphorus level during vegetative growth","type":"exact"}],"termid":"FYPO:0001543"}


id: PBO:0025435
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pompe disease","termid":"PBO:0025435"}


id: PBO:0085763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; binds phosphatidylinositols and cardiolipin in a large-scale study","termid":"PBO:0085763"}


id: FYPO:0003991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is higher than normal when the population in which the cell is found is in stationary phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level in stationary phase","synonyms":[{"name":"increased RNA accumulation in stationary phase","type":"related"},{"name":"increased transcript level in stationary phase","type":"exact"}],"termid":"FYPO:0003991"}


id: MONDO:0005078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant fibroepithelial neoplasm arising from the breast and rarely the prostate gland. It may recur following resection. The recurrence rates are higher for borderline and malignant phyllodes tumors. In borderline and malignant phyllodes tumors metastases to distant anatomic sites can occur. The incidence of metastases is higher in malignant phyllodes tumors.","definition_xrefs":["NCIT:C2977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroepithelial neoplasm","termid":"MONDO:0021045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phyllodes tumor","secondary_identifiers":["MEDGEN:1209","UMLS:C0010701","MESH:D003557","EFO:0000653"],"synonyms":[{"name":"CSP","type":"exact"},{"name":"cystosarcoma phyllodes","type":"exact"},{"name":"phyllodes neoplasm","type":"exact"},{"name":"phyllodes tumor","type":"exact"}],"termid":"MONDO:0005078","xrefs":{"Monarch":{"xref_id":"0005078"}}}


id: PBO:0108953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM69 pseudogene 1","termid":"PBO:0108953"}


id: PBO:0076003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIM1 antisense RNA 1","termid":"PBO:0076003"}


id: PBO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.41","termid":"PBO:0000723"}


id: GO:0045467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R7 photoreceptor over time, from its formation to the mature structure. The R7 photoreceptor is the last photoreceptor to develop in the ommatidium.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R7 cell development","termid":"GO:0045467"}


id: GO:0005943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A class I phosphatidylinositol 3-kinase complex that possesses 1-phosphatidylinositol-4-phosphate 3-kinase activity; comprises a catalytic class IA phosphoinositide 3-kinase (PI3K) subunit and an associated SH2 domain-containing regulatory subunit that is a member of a family of related proteins often called p85 proteins. Through the interaction with the SH2-containing adaptor subunits, Class IA PI3K catalytic subunits are linked to tyrosine kinase signaling pathways.","definition_xrefs":["PMID:9255069","PMID:9759495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex, class I","termid":"GO:0097651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class IA","secondary_identifiers":["GO:0035030"],"synonyms":[{"name":"1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex","type":"exact"},{"name":"1-phosphatidylinositol-4-phosphate kinase, class IA complex","type":"exact"},{"name":"class IA PI3K complex","type":"exact"},{"name":"phosphoinositide 3-kinase complex, class IA","type":"exact"}],"termid":"GO:0005943"}


id: PBO:0038600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 1","termid":"PBO:0038600"}


id: PBO:0091501
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript, alternative initiation site","termid":"PBO:0091501"}


id: PBO:0116608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3133","termid":"PBO:0116608"}


id: MONDO:1010583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, chicken","termid":"MONDO:1010601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, chicken","secondary_identifiers":["OMIA:000424-9031"],"termid":"MONDO:1010583","xrefs":{"Monarch":{"xref_id":"1010583"}}}


id: SO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The helix has 3.6 residues per turn which corresponds to a translation of 1.5 angstroms (= 0.15 nm) along the helical axis. Every backbone N-H group donates a hydrogen bond to the backbone C=O group of the amino acid four residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"alpha_helix","secondary_identifiers":["http://en.wikipedia.org/wiki/Alpha_helix","BS:00040"],"synonyms":[{"name":"a-helix","type":"related"},{"name":"helix","type":"related"}],"termid":"SO:0001117"}


id: PR:Q9Y7Z6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1539.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Z6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein C1539.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.02","synonyms":[{"name":"Spom972h-SPBC1539.02","type":"exact"}],"termid":"PR:Q9Y7Z6"}


id: PBO:0066250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMS3 antisense RNA 3","termid":"PBO:0066250"}


id: GO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to Brgmann glial cells, specialized bipotential progenitors cells of the cerebellum. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","PMID:10375501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bergmann glial cell differentiation","termid":"GO:0060020"}


id: GO:0140239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process in which the postsynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.","definition_xrefs":["PMID:12839988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"postsynaptic endocytosis","termid":"GO:0140239"}


id: GO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["RHEA:10072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"dimethylglycine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07244","MetaCyc:RXN-9680","EC:2.1.1.161"],"synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"related"}],"termid":"GO:0052729"}


id: GO:0061546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a tyramine by a cell in which the tyramine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amine secretion, neurotransmission","termid":"GO:0061532"},{"relation_name":"is_a","term_name":"tyramine secretion","termid":"GO:0061545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"tyramine secretion, neurotransmission","termid":"GO:0061546"}


id: GO:0090618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing the PCNA complex from DNA when Okazaki fragments are completed or the replication fork terminates.","definition_xrefs":["GOC:rb","PMID:23499004"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA clamp unloading (obsolete GO:0090618)","synonyms":[{"name":"PCNA unloading","type":"related"}],"termid":"GO:0090618"}


id: PBO:0066039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 8","termid":"PBO:0066039"}


id: MONDO:0018400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare female infertility due to an adrenal disorder (obsolete MONDO:0018400)","secondary_identifiers":["Orphanet:399849"],"termid":"MONDO:0018400","xrefs":{"Monarch":{"xref_id":"0018400"}}}


id: GO:0102449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferol + S-adenosyl-L-methionine = 3-O-methylkaempferol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"kaempferol 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13935"],"termid":"GO:0102449"}


id: GO:0060298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"regulation of sarcomere organization","termid":"GO:0060297"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"sarcomere organization","termid":"GO:0045214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sarcomere organization","synonyms":[{"name":"positive regulation of sarcomere organisation","type":"exact"}],"termid":"GO:0060298"}


id: PBO:0029835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell_with_abnormal_cell_shape","termid":"PBO:0029835"}


id: GO:0060969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene silencing (obsolete GO:0060969)","termid":"GO:0060969"}


id: PBO:0088471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox17","termid":"PBO:0088471"}


id: _global:present_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is observed, where it is not known whether the modification was added during the indicated phase or process (if this is known use the added_during relation) or during a preceding phase or process.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present_during","termid":"_global:present_during"}


id: GO:0051197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of coenzyme metabolic process (obsolete GO:0051197)","synonyms":[{"name":"activation of coenzyme metabolic process","type":"narrow"},{"name":"positive regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"positive regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"positive regulation of coenzyme metabolism","type":"exact"},{"name":"stimulation of coenzyme metabolic process","type":"narrow"},{"name":"up regulation of coenzyme metabolic process","type":"exact"},{"name":"up-regulation of coenzyme metabolic process","type":"exact"},{"name":"upregulation of coenzyme metabolic process","type":"exact"}],"termid":"GO:0051197"}


id: PBO:0012522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_specification_of","termid":"PBO:0012522"}


id: FYPO:0000884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000865"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000884"}


id: FYPO:0004622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle disassembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000337"],"is_obsolete":false,"name":"abolished mitotic spindle disassembly","synonyms":[{"name":"abolished mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"abolished spindle disassembly during mitotic cell cycle","type":"related"},{"name":"spindle disassembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0004622"}


id: PBO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 2","termid":"PBO:0047633"}


id: MONDO:0027655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allopurinol toxicity","secondary_identifiers":["Orphanet:240845"],"termid":"MONDO:0027655","xrefs":{"Monarch":{"xref_id":"0027655"}}}


id: GO:1901374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an acetate ester into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"acetate ester transport","termid":"GO:1901374"}


id: PBO:0046524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 1","termid":"PBO:0046524"}


id: PBO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fission yeast specific family","termid":"PBO:0000005"}


id: GO:0102971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + phosphinothricin = H+ + coenzyme A(4-) + N-acetylphosphinatothricinate.","definition_xrefs":["GOC:pz","EC:2.3.1.183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"phosphinothricin N-acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9382","RHEA:12597"],"termid":"GO:0102971"}


id: PBO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"krr family protein (predicted)","termid":"PBO:0000564"}


id: PBO:0043699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 5","termid":"PBO:0043699"}


id: PBO:0038536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 12, lysophospholipase","termid":"PBO:0038536"}


id: GO:0043698
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which purines crystalize in reflective stacks. Iridosomes are synthesized in iridophore cells and are silver, gold or iridescent in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"iridosome","synonyms":[{"name":"reflecting platelet","type":"exact"}],"termid":"GO:0043698"}


id: MONDO:0006312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, localized, nodular and well-circumscribed neoplasm usually seen as a congenital neoplasm or in the first year of life. It is characterized by a biphasic growth pattern and is composed of small, undifferentiated mesenchymal cells associated with branching thin-walled vessels and more mature neoplastic spindle cells with abundant eosinophilic cytoplasm in a collagenous stroma.","definition_xrefs":["NCIT:C7052"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"excluded_subClassOf","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign perivascular tumor","termid":"MONDO:0003342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibroma","secondary_identifiers":["UMLS:C1266121","ICDO:8824/0","EFO:1000389","MESH:D047708","MEDGEN:220420","ONCOTREE:MF","DOID:4386"],"synonyms":[{"name":"infantile hemangiopericytoma","type":"related"},{"name":"lipoleiomyoma","type":"exact"},{"name":"myofibroma","type":"exact"},{"name":"myofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006312","xrefs":{"Monarch":{"xref_id":"0006312"}}}


id: MONDO:1010989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, pig","secondary_identifiers":["OMIA:000487-9823"],"termid":"MONDO:1010989","xrefs":{"Monarch":{"xref_id":"1010989"}}}


id: PBO:0042086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 153","termid":"PBO:0042086"}


id: PBO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_part_of","termid":"PBO:0017425"}


id: GO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that binds glutamate and is linked to the inositol 1,4,5-trisphosphate/calcium signaling system.","definition_xrefs":["PMID:9016303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor activity","termid":"GO:0098988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"PLC activating G protein-coupled glutamate receptor activity","synonyms":[{"name":"Group I metabotropic glutamate receptor","type":"related"},{"name":"PLC activating G-protein coupled glutamate receptor activity","type":"exact"},{"name":"PLC activating metabotropic glutamate receptor activity","type":"exact"},{"name":"group I metabotropic glutamate receptor activity","type":"related"},{"name":"phospholipase C activating metabotropic glutamate receptor activity","type":"exact"}],"termid":"GO:0001639"}


id: GO:0085036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the symbiont plasma membrane and the extrahaustorial membrane of the host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"host extracellular space","termid":"GO:0043655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extrahaustorial matrix","termid":"GO:0085036"}


id: GO:1902823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:pad","PMID:23949442","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of late endosome to lysosome transport","termid":"GO:1902822"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of late endosome to lysosome transport","synonyms":[{"name":"down regulation of late endosome to lysosome transport","type":"exact"},{"name":"down-regulation of late endosome to lysosome transport","type":"exact"},{"name":"downregulation of late endosome to lysosome transport","type":"exact"},{"name":"inhibition of late endosome to lysosome transport","type":"narrow"}],"termid":"GO:1902823"}


id: PBO:0026863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abolished_mitotic_sister_chromatid_separation,_with_mononucleate_and_anucleate_compartment_formation","termid":"PBO:0026863"}


id: PBO:0030700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydrogen_peroxide","termid":"PBO:0030700"}


id: PBO:0084791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; mutation affects vacuolar protein sorting; putative transporter; member of the sugar porter family; VPS73 has a paralog, YBR241C, that arose from the whole genome duplication","termid":"PBO:0084791"}


id: PBO:0039801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis resistant E3 ubiquitin protein ligase 1","termid":"PBO:0039801"}


id: PBO:0000797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position, met5","termid":"PBO:0000797"}


id: MONDO:0100548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurological disorder in which the cause of the disease is a mutation in the SERAC1 gene.","definition_xrefs":["PMID:28916646","PMID:37090937","PMID:29686941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERAC1-related neurological disorder","termid":"MONDO:0100548","xrefs":{"Monarch":{"xref_id":"0100548"}}}


id: GO:0051931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception, the series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception","termid":"GO:0051931"}


id: GO:0099530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity occurring in the postsynaptic membrane that is part of a GPCR signaling pathway that positively regulates ion channel activity in the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"G-protein coupled receptor activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099530"}


id: PBO:0017056
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ars Binding Protein","termid":"PBO:0017056"}


id: MONDO:0002584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syringomyelia (obsolete MONDO:0002584)","termid":"MONDO:0002584","xrefs":{"Monarch":{"xref_id":"0002584"}}}


id: GO:0008839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + NAD(P)+ + H2O = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + NAD(P)H + H+.","definition_xrefs":["EC:1.17.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate reductase","secondary_identifiers":["MetaCyc:RXN-14014"],"synonyms":[{"name":"2,3,4,5-tetrahydrodipicolinate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"dihydrodipicolinate reductase activity","type":"exact"},{"name":"dihydrodipicolinic acid reductase activity","type":"related"}],"termid":"GO:0008839"}


id: MONDO:0000549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A relatively uncommon neuroblastoma that is found in the neck.","definition_xrefs":["PMID:23120455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracranial neuroblastoma","termid":"MONDO:0002749"},{"relation_name":"is_a","term_name":"neoplasm of neck","termid":"MONDO:0021351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical neuroblastoma","secondary_identifiers":["DOID:0050935"],"synonyms":[{"name":"neck neuroblastoma","type":"exact"},{"name":"neuroblastoma of neck","type":"exact"}],"termid":"MONDO:0000549","xrefs":{"Monarch":{"xref_id":"0000549"}}}


id: FYPO:0002068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize histidine, and therefore requires histidine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for histidine","synonyms":[{"name":"growth auxotrophic for histidine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for histidine during vegetative growth","type":"exact"},{"name":"histidine auxotrophy","type":"exact"}],"termid":"FYPO:0002068"}


id: PBO:0059726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 34","termid":"PBO:0059726"}


id: PBO:0039902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF4 antisense RNA 1","termid":"PBO:0039902"}


id: PBO:0071459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32","termid":"PBO:0071459"}


id: PBO:0080497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor","termid":"PBO:0080497"}


id: PBO:0005657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs130 (predicted)","termid":"PBO:0005657"}


id: GO:0090681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is responsible for the sense of taste.","definition_xrefs":["GOC:tb","GOC:hat"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"GPCR taste receptor activity","synonyms":[{"name":"G-protein coupled taste receptor activity","type":"exact"},{"name":"G-protein-coupled taste receptor activity","type":"exact"}],"termid":"GO:0090681"}


id: PBO:0029097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cysteine_synthase_activity","termid":"PBO:0029097"}


id: PBO:0082949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic NAD(+)-dependent protein deacetylase; deacetylation targets are primarily cytoplasmic proteins; member of the silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases; modulates nucleolar (rDNA) and telomeric silencing; possesses NAD(+)-dependent histone deacetylase activity in vitro; contains a nuclear export signal (NES); function regulated by its nuclear export","termid":"PBO:0082949"}


id: FYPO:0003851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on MTT","synonyms":[{"name":"normal cell population growth in presence of MTT","type":"exact"},{"name":"normal cell population growth on MTT","type":"exact"},{"name":"normal cellular response to MTT","type":"related"},{"name":"normal growth on 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide","type":"exact"},{"name":"normal vegetative cell population growth on MTT","type":"exact"}],"termid":"FYPO:0003851"}


id: MONDO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from eccrine ducts in the vulva and is characterized by the presence of tubules and cysts which are lined by epithelial cells in the densely fibrotic dermis.","definition_xrefs":["NCIT:C40311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"syringoma","termid":"MONDO:0002191"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvar syringoma","secondary_identifiers":["MEDGEN:311490","DOID:2064","UMLS:C1520099"],"synonyms":[{"name":"mammalian vulva syringoma","type":"exact"},{"name":"syringoma of mammalian vulva","type":"exact"},{"name":"vulvar syringoma","type":"exact"}],"termid":"MONDO:0002190","xrefs":{"Monarch":{"xref_id":"0002190"}}}


id: PBO:0071736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 34","termid":"PBO:0071736"}


id: PBO:0066197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM15 antisense RNA 1","termid":"PBO:0066197"}


id: GO:0034302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an akinete, a thick-walled (encysted) dormant cell derived from the enlargement of a vegetative cell, is formed. Akinetes typically have granular cytoplasm, are more resistant to environmental extremes than vegetative cells, and are characteristic of several groups of Cyanobacteria.","definition_xrefs":["GOC:mah","PMID:11948167","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"akinete formation","termid":"GO:0034302"}


id: PBO:0066351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA terminal phosphate cyclase like 1","termid":"PBO:0066351"}


id: PBO:0047406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 44","termid":"PBO:0047406"}


id: PBO:0083530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SMI1/YGR229C","termid":"PBO:0083530"}


id: PBO:0083354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene MET2/YNL277W","termid":"PBO:0083354"}


id: RO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has start sequence y if the start of x is identical to the start of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_sequence","termid":"RO:0002516"}


id: PBO:0036428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate dehydrogenase Put2 (predicted)","termid":"PBO:0036428"}


id: PBO:0042445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 3 pseudogene 1","termid":"PBO:0042445"}


id: GO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"positively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone biosynthetic process","synonyms":[{"name":"activation of hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of hormone anabolism","type":"exact"},{"name":"positive regulation of hormone biosynthesis","type":"exact"},{"name":"positive regulation of hormone formation","type":"exact"},{"name":"positive regulation of hormone synthesis","type":"exact"},{"name":"stimulation of hormone biosynthetic process","type":"narrow"},{"name":"up regulation of hormone biosynthetic process","type":"exact"},{"name":"up-regulation of hormone biosynthetic process","type":"exact"},{"name":"upregulation of hormone biosynthetic process","type":"exact"}],"termid":"GO:0046886"}


id: GO:0008771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate + (citrate (pro-3S)-lyase) (thiol form) = AMP + diphosphate + (citrate (pro-3S)-lyase) (acetyl form).","definition_xrefs":["EC:6.2.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"[citrate (pro-3S)-lyase] ligase activity","secondary_identifiers":["KEGG_REACTION:R04449","RHEA:23788","MetaCyc:CITC-RXN"],"synonyms":[{"name":"acetate: SH-acyl-carrier-protein enzyme ligase (AMP)","type":"related"},{"name":"acetate:HS-citrate lyase ligase activity","type":"related"},{"name":"acetate:citrate-(pro-3S)-lyase(thiol-form) ligase (AMP-forming)","type":"broad"},{"name":"citrate (pro-3S)-lyase ligase activity","type":"related"},{"name":"citrate lyase ligase activity","type":"related"},{"name":"citrate lyase synthetase activity","type":"related"}],"termid":"GO:0008771"}


id: GO:0097466
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95318,97488],"is_not":false,"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"An ERAD pathway whereby endoplasmic reticulum (ER)-resident glycoproteins are targeted for degradation. Includes differential processing of the glycoprotein sugar chains, retrotranslocation to the cytosol and degradation by the ubiquitin-proteasome pathway. A glycoprotein is a compound in which a carbohydrate component is covalently bound to a protein component.","definition_xrefs":["PMID:16079177","GOC:bf","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"ERAD pathway","termid":"GO:0036503"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent glycoprotein ERAD pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated glycoprotein degradation","type":"exact"},{"name":"glycoprotein ERAD","type":"exact"},{"name":"gpERAD","type":"exact"},{"name":"misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"}],"termid":"GO:0097466","terms_by_termid":{"GO:0097466":null}}


id: MONDO:0011298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD8 on chromosome 18p.","definition_xrefs":["DOID:0070084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 8","secondary_identifiers":["UMLS:C1864124","MEDGEN:400456","OMIM:603206"],"synonyms":[{"name":"SCZD8","type":"exact"},{"name":"schizophrenia 8","type":"exact"},{"name":"schizophrenia 8 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 18-related","type":"related"}],"termid":"MONDO:0011298","xrefs":{"Monarch":{"xref_id":"0011298"}}}


id: PBO:0026922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4_acetylation","termid":"PBO:0026922"}


id: MONDO:0007452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monogenic diabetes caused by inactivating mutation(s) in the gene HNF4A, encoding hepatocyte nuclear factor 4-alpha.","definition_xrefs":["NCIT:C129744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005015","MONDO:0019254","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 1","secondary_identifiers":["DOID:0111099","NANDO:2200461","MESH:C565101","UMLS:C1852093","SCTID:609562003","MEDGEN:377589","GARD:3418","NANDO:2201069","OMIM:125850"],"synonyms":[{"name":"HNF4A-associated monogenic diabetes","type":"exact"},{"name":"MODY HNF4A related","type":"related"},{"name":"MODY type 1","type":"exact"},{"name":"MODY, type 1","type":"related"},{"name":"MODY, type I","type":"exact"},{"name":"MODY1","type":"exact"},{"name":"diabetes mellitus MODY type 1","type":"related"},{"name":"diabetes mellitus type 2","type":"exact"},{"name":"hepatocyte nuclear Factor 4-Alpha associated monogenic diabetes","type":"exact"},{"name":"maturity onset diabetes of the Young, type 1","type":"exact"},{"name":"maturity-onset diabetes of the young, type 1","type":"related"},{"name":"mild juvenile diabetes mellitus","type":"exact"},{"name":"type 1 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0007452","xrefs":{"Monarch":{"xref_id":"0007452"}}}


id: GO:0015437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a lipopolysaccharide from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["EC:7.5.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"lipopolysaccharide floppase activity","synonyms":[{"name":"ATP-dependent intramembrane lipopolysaccharide transporter activity","type":"exact"},{"name":"ATPase-coupled intramembrane lipopolysaccharide transporter activity","type":"broad"},{"name":"LPS-transporting ATPase activity","type":"exact"},{"name":"lipopolysaccharide floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"lipopolysaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015437"}


id: MONDO:0020221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary glaucoma due to a proliferation and differentiation anomaly (obsolete MONDO:0020221)","secondary_identifiers":["Orphanet:98637"],"termid":"MONDO:0020221","xrefs":{"Monarch":{"xref_id":"0020221"}}}


id: PBO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Fungi","termid":"PBO:0031870"}


id: PBO:0039708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte plasma membrane associated protein","termid":"PBO:0039708"}


id: PBO:0090025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster transfer protein Nfu1","termid":"PBO:0090025"}


id: PR:O42965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19G7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.17","synonyms":[{"name":"Spom972h-SPBC19G7.17","type":"exact"}],"termid":"PR:O42965"}


id: PBO:0012225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin","termid":"PBO:0012225"}


id: PR:G2TRL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo-[acyl-carrier-protein] synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.17","synonyms":[{"name":"4'-phosphopantetheinyl transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Holo-ACP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-new8","type":"exact"}],"termid":"PR:G2TRL9"}


id: PBO:0090547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 family phosphatase Ibp1, unknown role, implicated in DNA replication","termid":"PBO:0090547"}


id: FYPO:0005444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is initially slower than normal, and remains slow for several generations, after which the population resumes growing at a normal or near-normal rate.","definition_xrefs":["PomBase:mah","PMID:17429064"],"direct_ancestors":[{"relation_name":"has_part","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"},{"relation_name":"is_a","term_name":"slow vegetative cell population growth","termid":"FYPO:0001234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0002057"},{"rel_name":"has_part","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"slow vegetative cell population growth followed by return to normal growth rate","synonyms":[{"name":"decreased cell population proliferation followed by return to normal proliferation","type":"related"},{"name":"decreased cell proliferation followed by return to normal proliferation","type":"related"},{"name":"reduced cell proliferation followed by return to normal proliferation","type":"related"},{"name":"slow cell population growth followed by return to normal growth rate during vegetative growth","type":"exact"}],"termid":"FYPO:0005444"}


id: PBO:0034416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_process_that_results_in_movement_of","termid":"PBO:0034416"}


id: PBO:0084687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial component of the ERMES complex; links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084687"}


id: FYPO:0008155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which regulatory lncRNA 3' end processing is abnormal.","definition_xrefs":["PMID:32415063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulatory lncRNA 3'-end processing","termid":"FYPO:0008155"}


id: GO:0048327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an axial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"axial mesodermal cell fate commitment","termid":"GO:0048322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate specification","synonyms":[{"name":"axial mesoderm cell fate specification","type":"exact"}],"termid":"GO:0048327"}


id: PBO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 4","termid":"PBO:0060684"}


id: PBO:0060230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYADM antisense RNA 2","termid":"PBO:0060230"}


id: GO:0045523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-27 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-27 receptor binding","synonyms":[{"name":"IL-27","type":"narrow"},{"name":"interleukin-27 receptor ligand","type":"narrow"}],"termid":"GO:0045523"}


id: MONDO:0019644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unilateral renal dysplasia is a form of renal dysplasia (RD), a renal tract malformation in which the development of one kidney is abnormal and incomplete. Unilateral RD can be segmental, and of variable severity, with renal aplasia corresponding to extreme RD.","definition_xrefs":["Orphanet:93172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia","termid":"MONDO:0019638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal dysplasia, unilateral","secondary_identifiers":["HP:0008718","UMLS:C0431697","GARD:19177","MEDGEN:140916"],"synonyms":[{"name":"unilateral renal dysplasia","type":"exact"}],"termid":"MONDO:0019644","xrefs":{"Monarch":{"xref_id":"0019644"}}}


id: PBO:0065313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 36","termid":"PBO:0065313"}


id: MONDO:0020539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"},{"relation_name":"is_a","term_name":"nongerminomatous germ cell tumor","termid":"MONDO:0021656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extragonadal non-dysgerminomatous germ cell tumor","secondary_identifiers":["GARD:19706","Orphanet:99913","MEDGEN:1843056","UMLS:C5681817"],"termid":"MONDO:0020539","xrefs":{"Monarch":{"xref_id":"0020539"}}}


id: GO:0032348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of aldosterone metabolic process","termid":"GO:0032345"},{"relation_name":"is_a","term_name":"regulation of aldosterone biosynthetic process","termid":"GO:0032347"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"aldosterone biosynthetic process","termid":"GO:0032342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of aldosterone biosynthetic process","synonyms":[{"name":"down regulation of aldosterone biosynthetic process","type":"exact"},{"name":"down-regulation of aldosterone biosynthetic process","type":"exact"},{"name":"downregulation of aldosterone biosynthetic process","type":"exact"},{"name":"inhibition of aldosterone biosynthetic process","type":"narrow"}],"termid":"GO:0032348"}


id: PBO:0077501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 219","termid":"PBO:0077501"}


id: MONDO:0018981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neonatal epilepsy syndrome characterized by seizures without specific underlying etiology, occurring during the first days of life in infants with an otherwise normal neurological state and no family history of neonatal convulsions. The most commonly partial and clonic seizures usually last for one to three minutes. Repeated seizures may lead to status epilepticus lasting up to 20 hours. Overall, remission rates are high and neurological outcome is favorable.","definition_xrefs":["Orphanet:64545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal epilepsy syndrome","termid":"MONDO:0020070"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign idiopathic neonatal seizures","secondary_identifiers":["icd11.foundation:1131336245","UMLS:C0393693","GARD:18860","MEDGEN:140738"],"synonyms":[{"name":"BINS","type":"exact"},{"name":"benign nonfamilial neonatal seizures","type":"exact"}],"termid":"MONDO:0018981","xrefs":{"Monarch":{"xref_id":"0018981"}}}


id: MONDO:0010743
data:
  {"annotated_genes":["SJAG_01732"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88958],"is_not":false,"summary":null,"term":"MONDO:0010743"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01732":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:852","UMLS:C1839163","OMIM:313900","MESH:C564052","NCIT:C176617","GARD:5176","MEDGEN:326416"],"synonyms":[{"name":"THC","type":"related"},{"name":"THC1","type":"related"},{"name":"X-linked thrombocytopenia","type":"related"},{"name":"X-linked thrombocytopenia with normal platelets","type":"exact"},{"name":"XLT","type":"related"},{"name":"thrombocytopenia 1","type":"exact"},{"name":"thrombocytopenia type 1","type":"exact"},{"name":"thrombocytopenia, X-linked","type":"related"},{"name":"thrombocytopenia, X-linked, 1","type":"related"},{"name":"thrombocytopenia, X-linked, X-linked recessive","type":"exact"},{"name":"thrombocytopenia, X-linked, intermittent","type":"related"},{"name":"thrombocytopenia, X-linked, intermittent, X-linked recessive","type":"exact"}],"termid":"MONDO:0010743","terms_by_termid":{"MONDO:0010743":null},"xrefs":{"Monarch":{"xref_id":"0010743"}}}


id: PBO:0120036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S2 OR ribosomal protein S27, zinc-binding domain superfamily (S27-like)","termid":"PBO:0120036"}


id: PBO:0047872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(p24.2)","termid":"PBO:0047872"}


id: PBO:0111766
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family","termid":"PBO:0111766"}


id: PBO:0056983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30c-1","termid":"PBO:0056983"}


id: PATO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001146 resistance value (obsolete PATO:0001146)","termid":"PATO:0001146"}


id: MONDO:0005374
data:
  {"annotated_genes":["SJAG_01013","SJAG_03905","SJAG_05979","SJAG_03453","SJAG_01748","SJAG_01349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88975,88974,89131,88977,88976,89132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"Neoplasms that affect the bone marrow. Such neoplasms may arise in the bone marrow (e.g. myeloid leukemias) or may involve the bone marrow as secondary, metastatic tumors (e.g. metastatic carcinomas to the bone marrow).","definition_xrefs":["NCIT:C35370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"bone marrow neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:238.79","UMLS:C0282609","DOID:4960","MEDGEN:129203","SCTID:414824005","MESH:D019046"],"synonyms":[{"name":"bone marrow cancer","type":"narrow"},{"name":"bone marrow neoplasm","type":"exact"},{"name":"bone marrow neoplasm (disease)","type":"exact"},{"name":"bone marrow tumor","type":"exact"},{"name":"bone marrow tumour","type":"exact"},{"name":"malignant bone marrow tumor","type":"narrow"},{"name":"malignant bone marrow tumour","type":"narrow"},{"name":"neoplasm of bone marrow","type":"exact"},{"name":"tumor of bone marrow","type":"exact"},{"name":"tumour of bone marrow","type":"exact"}],"termid":"MONDO:0005374","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0005374"}}}


id: GO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Z disc","synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018"}


id: PBO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 pseudogene 1","termid":"PBO:0047732"}


id: PBO:0117017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF16 antisense RNA 1","termid":"PBO:0117017"}


id: PBO:0069296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 552, pseudogene","termid":"PBO:0069296"}


id: MONDO:1012018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atopy, non-human animal","termid":"MONDO:1011733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atopy, domestic cat","secondary_identifiers":["OMIA:000082-9685"],"termid":"MONDO:1012018","xrefs":{"Monarch":{"xref_id":"1012018"}}}


id: GO:0042031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of angiotensin-converting enzyme, thereby preventing the synthesis of angiotensin II from its precursor, angiotensin I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete angiotensin-converting enzyme inhibitor activity (obsolete GO:0042031)","synonyms":[{"name":"ACE inhibitor","type":"exact"},{"name":"angiotensin-converting enzyme inhibitor activity","type":"exact"},{"name":"peptidyl dipeptidase A inhibitor","type":"exact"}],"termid":"GO:0042031"}


id: PBO:0051801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 3","termid":"PBO:0051801"}


id: FYECO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cyanide-p-trifluoromethoxyphenylhydrazone was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FCCP","secondary_identifiers":["PMID:37590302"],"synonyms":[{"name":"carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"FYECO:0000436"}


id: MONDO:0004802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by infiltration of the lung with eosinophils due to inflammation or other disease processes. Major eosinophilic lung diseases are the eosinophilic pneumonias caused by infections, allergens, or toxic agents.","definition_xrefs":["MESH:D011657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"pulmonary eosinophilia","secondary_identifiers":["icd11.foundation:544479555","UMLS:C0034068","DOID:9498","MEDGEN:46208","ICD9:518.3","SCTID:367542003"],"termid":"MONDO:0004802","xrefs":{"Monarch":{"xref_id":"0004802"}}}


id: MONDO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short-rib thoracic dysplasia (SRTD) with or without polydactyly refers to a group of autosomal recessive skeletal ciliopathies that are characterized by a constricted thoracic cage, short ribs, shortened tubular bones, and a 'trident' appearance of the acetabular roof. SRTD encompasses Ellis-van Creveld syndrome (EVC) and the disorders previously designated as Jeune syndrome or asphyxiating thoracic dystrophy (ATD), short rib-polydactyly syndrome (SRPS), and Mainzer-Saldino syndrome (MZSDS). Polydactyly is variably present, and there is phenotypic overlap in the various forms of SRTDs, which differ by visceral malformation and metaphyseal appearance. Nonskeletal involvement can include cleft lip/palate as well as anomalies of major organs such as the brain, eye, heart, kidneys, liver, pancreas, intestines, and genitalia. Some forms of SRTD are lethal in the neonatal period due to respiratory insufficiency secondary to a severely restricted thoracic cage, whereas others are compatible with life (summary by {1:Huber and Cormier-Daire, 2012} and {2:Schmidts et al., 2013}).nnThere is phenotypic overlap with the cranioectodermal dysplasias (Sensenbrenner syndrome; see CED1, OMIM:218330).","definition_xrefs":["OMIM:617925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 20 with polydactyly","secondary_identifiers":["MEDGEN:1634931","UMLS:C4693616"],"synonyms":[{"name":"SRTD20","type":"related"},{"name":"short-rib thoracic dysplasia 20 with polydactyly","type":"exact"}],"termid":"MONDO:0044328","xrefs":{"Monarch":{"xref_id":"0044328"}}}


id: PBO:0117064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTSR1 antisense RNA 1","termid":"PBO:0117064"}


id: PBO:0057474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 592","termid":"PBO:0057474"}


id: PBO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease, unknown 1 (predicted)","termid":"PBO:0000140"}


id: PBO:0083793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of the mitochondrial intermembrane space; forms a complex with Tim10p (TIM10 complex) that delivers hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0083793"}


id: GO:0102109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricaffeoyl spermidine + 3 S-adenosyl-L-methionine = 3 H+ + triferuloyl spermidine + 3 S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"tricaffeoyl spermidine O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11261"],"termid":"GO:0102109"}


id: MONDO:0005784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder caused by hantaviruses of the family Bunyaviridae. It is transmitted by rodents and is manifested with fever, hemorrhage, and renal failure. Other symptoms include headaches, abdominal and back pain, and blurred vision.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"hantavirus infectious disease","termid":"MONDO:0005780"},{"relation_name":"is_a","term_name":"urinary tract infection","termid":"MONDO:0100338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hantavirus hemorrhagic fever with renal syndrome","secondary_identifiers":["ICD9:078.6","SCTID:102455002","DOID:11266","ICD10CM:A98.5","NCIT:C84753"],"synonyms":[{"name":"HFRS","type":"exact"},{"name":"Puumala virus nephropathy","type":"narrow"},{"name":"hemorrhagic fever with renal syndrome","type":"related"},{"name":"hemorrhagic fever, Russian","type":"narrow"},{"name":"hemorrhagic nephrosonephritis","type":"exact"}],"termid":"MONDO:0005784","xrefs":{"Monarch":{"xref_id":"0005784"}}}


id: GO:0043648
data:
  {"annotated_genes":["SJAG_00203","SJAG_03306","SJAG_00937","SJAG_00518","SJAG_01198","SJAG_02225","SJAG_03266","SJAG_00224","SJAG_04145","SJAG_00529","SJAG_03275","SJAG_01903","SJAG_00359","SJAG_00495","SJAG_00337","SJAG_02408","SJAG_02176","SJAG_00106","SJAG_04054","SJAG_04843","SJAG_00695","SJAG_02276","SJAG_03224","SJAG_00815","SJAG_00493","SJAG_03457","SJAG_00714","SJAG_02235","SJAG_01753","SJAG_03580","SJAG_01126","SJAG_04156","SJAG_03485","SJAG_01592","SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114248,110164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[96045,119583,73823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[79393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[91611,92870,96365,103046,115930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009423"},{"annotations":[69942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[72751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[114249,107891,61201,70568,110165,57137,106592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[72753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[91941,80984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006106"},{"annotations":[92651,104419,113641,113737,89610,106553,94712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006536"},{"annotations":[80097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[72558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[60113,119584,113066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[81317,93483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[79820,71936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[74936,62706,80985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006108"},{"annotations":[108592,74034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006107"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing two carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00203":null,"SJAG_00224":null,"SJAG_00337":null,"SJAG_00359":null,"SJAG_00493":null,"SJAG_00495":null,"SJAG_00518":null,"SJAG_00529":null,"SJAG_00695":null,"SJAG_00714":null,"SJAG_00815":null,"SJAG_00937":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01592":null,"SJAG_01753":null,"SJAG_01903":null,"SJAG_02176":null,"SJAG_02225":null,"SJAG_02235":null,"SJAG_02276":null,"SJAG_02408":null,"SJAG_03224":null,"SJAG_03266":null,"SJAG_03275":null,"SJAG_03306":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_03485":null,"SJAG_03580":null,"SJAG_04054":null,"SJAG_04145":null,"SJAG_04156":null,"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dicarboxylic acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"dicarboxylate metabolic process","type":"exact"},{"name":"dicarboxylate metabolism","type":"exact"},{"name":"dicarboxylic acid metabolism","type":"exact"}],"termid":"GO:0043648","terms_by_termid":{"GO:0006106":null,"GO:0006107":null,"GO:0006108":null,"GO:0006532":null,"GO:0006533":null,"GO:0006536":null,"GO:0006538":null,"GO:0006761":null,"GO:0009257":null,"GO:0009423":null,"GO:0010133":null,"GO:0019544":null,"GO:0019676":null,"GO:0046452":null,"GO:0046655":null,"GO:0046656":null,"GO:0097054":null}}


id: PBO:0040538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 5","termid":"PBO:0040538"}


id: GO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell wall surrounding a fungal hypha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"hyphal cell wall","termid":"GO:0030446"}


id: MONDO:0014653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ZNF408 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 72","secondary_identifiers":["UMLS:C4225315","MEDGEN:895867","DOID:0110395","ICD10CM:H35.5","GARD:16119","OMIM:616469"],"synonyms":[{"name":"RP72","type":"exact"},{"name":"ZNF408 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 72","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ZNF408","type":"exact"},{"name":"retinitis pigmentosa type 72","type":"exact"}],"termid":"MONDO:0014653","xrefs":{"Monarch":{"xref_id":"0014653"}}}


id: PBO:0075950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 5 pseudogene","termid":"PBO:0075950"}


id: MONDO:0004073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dentin dysplasia (obsolete MONDO:0004073)","termid":"MONDO:0004073","xrefs":{"Monarch":{"xref_id":"0004073"}}}


id: GO:0044149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"positive regulation of development of symbiont during interaction with host","type":"related"},{"name":"positive regulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044149"}


id: MONDO:0005828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection caused by Listeria monocytogenes. It occurs in newborns, elderly, and immunocompromised patients. The bacteria are transmitted through ingestion of contaminated food. Clinical manifestations include fever, muscle pain, respiratory distress, nausea, diarrhea, neck stiffness, irritability, seizures, and lethargy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"listeriosis","secondary_identifiers":["GARD:6915","DOID:11573","MedDRA:10024641","NCIT:C82994","ICD10CM:A32","MEDGEN:9788","EFO:0007347","NORD:1375","icd11.foundation:419706488","Orphanet:533","ICD9:027.0","MESH:D008088","UMLS:C0023860"],"synonyms":[{"name":"Listeria infection","type":"exact"},{"name":"Listeria monocytogenes caused disease or disorder","type":"exact"},{"name":"Listeria monocytogenes disease or disorder","type":"exact"},{"name":"Listeria monocytogenes infection","type":"related"},{"name":"Listeria monocytogenes infectious disease","type":"exact"},{"name":"infection by Listeria monocytogenes","type":"exact"}],"termid":"MONDO:0005828","xrefs":{"Monarch":{"xref_id":"0005828"}}}


id: PBO:0047984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2","termid":"PBO:0047984"}


id: MONDO:0010329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 77","secondary_identifiers":["GARD:22678","OMIM:300454","UMLS:C1845499","MESH:C564511","DOID:0112039","MEDGEN:335199"],"synonyms":[{"name":"MRX77","type":"exact"},{"name":"intellectual disability, X-linked 77","type":"exact"},{"name":"mental retardation, X-linked 77","type":"related"},{"name":"mental retardation, X-linked 77, X-linked recessive","type":"exact"}],"termid":"MONDO:0010329","xrefs":{"Monarch":{"xref_id":"0010329"}}}


id: PBO:0046950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A4","termid":"PBO:0046950"}


id: PR:Q9USY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abp2 gene.","definition_xrefs":["UniProtKB:Q9USY4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.02","synonyms":[{"name":"Spom972h-abp2","type":"exact"}],"termid":"PR:Q9USY4"}


id: FYPO:0005316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:22771823","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"},{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation during vegetative growth","termid":"FYPO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at subtelomere during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased subtelomeric histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005316"}


id: MONDO:0016876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 11 disorder","termid":"MONDO:0700018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 11","secondary_identifiers":["GARD:20799","MEDGEN:1826017","Orphanet:261816","UMLS:C5679659"],"synonyms":[{"name":"partial deletion of chromosome type 11","type":"exact"},{"name":"partial monosomy of chromosome 11","type":"exact"}],"termid":"MONDO:0016876","xrefs":{"Monarch":{"xref_id":"0016876"}}}


id: GO:0009232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["PMID:10961912","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"riboflavin catabolic process","synonyms":[{"name":"riboflavin breakdown","type":"exact"},{"name":"riboflavin catabolism","type":"exact"},{"name":"riboflavin degradation","type":"exact"},{"name":"vitamin B2 catabolic process","type":"exact"},{"name":"vitamin B2 catabolism","type":"exact"},{"name":"vitamin G catabolic process","type":"exact"},{"name":"vitamin G catabolism","type":"exact"}],"termid":"GO:0009232"}


id: PBO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NES","termid":"PBO:0001411"}


id: FYPO:0006309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is greater than normal at promoters containing FLEX elements. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:26804917","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at stress response genes","termid":"FYPO:0003812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased nucleosome occupancy at FLEX element","synonyms":[{"name":"increased nucleosome occupancy at FLEX element during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at FLEX element during vegetative growth","type":"exact"}],"termid":"FYPO:0006309"}


id: MONDO:1010635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor X deficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor X deficiency, non-human animal","termid":"MONDO:1010072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor X deficiency, domestic cat","secondary_identifiers":["OMIA:000362-9685"],"termid":"MONDO:1010635","xrefs":{"Monarch":{"xref_id":"1010635"}}}


id: GO:0090682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity that is responsible for the sense of bitter taste.","definition_xrefs":["GOC:hat","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bitter taste receptor activity","termid":"GO:0033038"},{"relation_name":"is_a","term_name":"GPCR taste receptor activity","termid":"GO:0090681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"GPCR bitter taste receptor activity","synonyms":[{"name":"G protein-coupled receptor bitter taste receptor activity","type":"exact"},{"name":"G-protein coupled receptor bitter taste receptor activity","type":"exact"}],"termid":"GO:0090682"}


id: FYPO:0006498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to UV","synonyms":[{"name":"increased protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0006498"}


id: GO:0018938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-nitropropane, a clear, colorless liquid with a mild, fruity odor. 2-nitropropane is used principally as a solvent and chemical intermediate. As a solvent, it is used in inks, paints, adhesives, varnishes, polymers, and synthetic materials. It is a feedstock for the manufacture of 2-nitro-2-methyl-1-propanol and 2-amino-2-methyl-1-propanol.","definition_xrefs":["UM-BBD_pathwayID:npp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-nitropropane metabolic process","secondary_identifiers":["MetaCyc:PWY-723"],"synonyms":[{"name":"2-nitropropane metabolism","type":"exact"}],"termid":"GO:0018938"}


id: PBO:0038456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis antagonizing transcription factor","termid":"PBO:0038456"}


id: GO:0030864
data:
  {"annotated_genes":["SJAG_01665","SJAG_03375","SJAG_01277","SJAG_04461","SJAG_01943","SJAG_01889","SJAG_04644","SJAG_03380","SJAG_02566","SJAG_03025","SJAG_03088","SJAG_02282","SJAG_00649","SJAG_02431","SJAG_01787","SJAG_02831","SJAG_04724","SJAG_03455","SJAG_04517","SJAG_03044","SJAG_01268","SJAG_04479","SJAG_03631","SJAG_03145","SJAG_04621","SJAG_01748","SJAG_01993","SJAG_03681","SJAG_01384","SJAG_03011","SJAG_01732","SJAG_00185","SJAG_00228","SJAG_05285","SJAG_00268","SJAG_00807","SJAG_02228","SJAG_02202","SJAG_00700","SJAG_00938","SJAG_02075","SJAG_00152","SJAG_00279","SJAG_03146","SJAG_00521","SJAG_00082","SJAG_02392","SJAG_00920","SJAG_02700","SJAG_02511","SJAG_04886","SJAG_03086","SJAG_00677","SJAG_04498","SJAG_03887","SJAG_02278","SJAG_02864","SJAG_03564","SJAG_04375","SJAG_04703","SJAG_04077","SJAG_00845","SJAG_00663","SJAG_03704","SJAG_01894","SJAG_02177","SJAG_04001","SJAG_00970","SJAG_03374","SJAG_02245","SJAG_00907","SJAG_04887","SJAG_01114","SJAG_03465","SJAG_03703","SJAG_04052","SJAG_02320","SJAG_04624","SJAG_00750","SJAG_01143","SJAG_04509","SJAG_02838","SJAG_04100","SJAG_04465","SJAG_03379","SJAG_03625","SJAG_02169","SJAG_04597","SJAG_03596","SJAG_03119","SJAG_02266","SJAG_02737","SJAG_03581","SJAG_00229","SJAG_04982","SJAG_01964"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91136],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030478"},{"annotations":[120358,120722,80987,114019,114739,65986,67246,104858,79435,69659,92436,106961,107151,71786,103540,70893,59239,99500,80831,81273,73866,94350,78545,108843,76190,116720,81886,95420,97062,113497,77710,78689,102706,101461,113992,70898,104535,76938,64332,110870,89911,104306,76575,102738,107828,108659,112510,75636,112850,116156,118005],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030479"},{"annotations":[121013,121011,121137,121010,121009,121012,121256],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005826"},{"annotations":[91586,120701,91097,117654,119486,103059,121087,121096,117738,95597,107155,103052,92488,96353,89653,108701,76627,121083,121085,112584,94310,100066,121080,78000,121078],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110085"},{"annotations":[110876,106948,102321,102486,119721],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[115194,102720,114136,92535,98976,96180,119722,90039,97625,110877,119739,98105,112625,96718,108009,105488,91758],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[118878,108851,58754,109946,81459,94094,99808,102749,105713,101903,99429,118785,79916,110878,58222],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"part_of","term_name":"actin 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actin cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"termid":"GO:0030864","terms_by_termid":{"GO:0005826":null,"GO:0030478":null,"GO:0030479":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null}}


id: GO:0009707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid outer membrane","termid":"GO:0009527"},{"relation_name":"is_a","term_name":"chloroplast membrane","termid":"GO:0031969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast outer membrane","synonyms":[{"name":"chloroplast outer envelope","type":"exact"}],"termid":"GO:0009707"}


id: MONDO:0020058
data:
  {"annotated_genes":["SJAG_04324","SJAG_03635","SJAG_01465","SJAG_03286","SJAG_00786","SJAG_04663","SJAG_02035"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87721,87719,87723,87720,87722,87724,87718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which the chromosomal anomaly involves an gonosome. A gonosome is a chromosome responsible for sex determination. In humans and most animals, the sex chromosomes are designated X and Y.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_01465":null,"SJAG_02035":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_04324":null,"SJAG_04663":null},"genotype_count":0,"is_obsolete":false,"name":"gonosome anomaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98155","ICD9:758.8","ICD9:758.81","SCTID:95462004"],"synonyms":[{"name":"Sex-chromosome anomaly","type":"exact"}],"termid":"MONDO:0020058","terms_by_termid":{"MONDO:0010767":null},"xrefs":{"Monarch":{"xref_id":"0020058"}}}


id: GO:0046821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal DNA","secondary_identifiers":["Wikipedia:Extrachromosomal_DNA"],"termid":"GO:0046821"}


id: PBO:0081247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 18","termid":"PBO:0081247"}


id: MONDO:0957460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal perforation","termid":"MONDO:0006807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"spontaneous intestinal perforation","secondary_identifiers":["MEDGEN:856598","Orphanet:645793","UMLS:C3897004","icd11.foundation:1355081169"],"termid":"MONDO:0957460","xrefs":{"Monarch":{"xref_id":"0957460"}}}


id: PBO:0029893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_phleomycin","termid":"PBO:0029893"}


id: GO:0018164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-threonine residue by the formation of O-(phospho-5'-DNA)-L-threonine.","definition_xrefs":["RESID:AA0255"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via peptidyl-threonine (obsolete GO:0018164)","synonyms":[{"name":"DNA-protein covalent cross-linking via peptidyl-threonine","type":"exact"}],"termid":"GO:0018164"}


id: PBO:0005254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inhibitor protein kinase Wee1","termid":"PBO:0005254"}


id: GO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of T cell antigen processing and presentation","termid":"GO:0002625"},{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"positively_regulates","term_name":"T cell antigen processing and presentation","termid":"GO:0002457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell antigen processing and presentation","synonyms":[{"name":"activation of T cell antigen processing and presentation","type":"narrow"},{"name":"positive regulation of T lymphocyte antigen processing and presentation","type":"exact"},{"name":"positive regulation of T-cell antigen processing and presentation","type":"exact"},{"name":"positive regulation of T-lymphocyte antigen processing and presentation","type":"exact"},{"name":"stimulation of T cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of T cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of T cell antigen processing and presentation","type":"exact"},{"name":"upregulation of T cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002627"}


id: PBO:0059879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 2","termid":"PBO:0059879"}


id: GO:0106165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay.","definition_xrefs":["GOC:vw","PMID:30601114"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0106165)","termid":"GO:0106165"}


id: MONDO:0022434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amelia cleft lip palate hydrocephalus iris coloboma (obsolete MONDO:0022434)","termid":"MONDO:0022434","xrefs":{"Monarch":{"xref_id":"0022434"}}}


id: PR:O59668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RMD5 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03103","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LisH domain-containing protein C29A3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.03c","secondary_identifiers":["UniProtKB:O59668"],"synonyms":[{"name":"Spom972h-RMND5A","type":"exact"}],"termid":"PR:O59668"}


id: FYPO:0006640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is abnormal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"abnormal protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"abnormal protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"abnormal protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"abnormal protein localization to spindle pole body during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006640"}


id: PBO:0071584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a like","termid":"PBO:0071584"}


id: FYPO:0001212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Glc1Man9GlcNAc2 measured in a cell is lower than normal. Glc1Man9GlcNAc2 is an N-glycan that is involved in post-translational modification of proteins, and consists of a branched ten-membered mannooligosaccharide containing one D-glucose residue, nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PomBase:mah","CHEBI:59080","PMID:9813085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased Glc1Man9GlcNAc level","synonyms":[{"name":"decreased Glc1Man9GlcNAc accumulation","type":"related"},{"name":"decreased Glc1Man9GlcNAc level during mitotic cell cycle","type":"related"},{"name":"decreased Glc1Man9GlcNAc level during vegetative growth","type":"exact"},{"name":"decreased Glc1Man9GlcNAc2 level","type":"exact"},{"name":"decreased cellular Glc1Man9GlcNAc level","type":"exact"},{"name":"reduced Glc1Man9GlcNAc level","type":"exact"}],"termid":"FYPO:0001212"}


id: PBO:0013798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37","termid":"PBO:0013798"}


id: PBO:0058175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4470","termid":"PBO:0058175"}


id: PBO:0024825
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Arabidopsis thaliana AtSGP1","termid":"PBO:0024825"}


id: MONDO:0004438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the breast and is not caused by inherited genetic mutations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sporadic breast cancer","secondary_identifiers":["NCIT:C7566","MEDGEN:233463","UMLS:C1336076","DOID:8029"],"synonyms":[{"name":"sporadic breast cancer","type":"exact"},{"name":"sporadic breast carcinoma","type":"exact"}],"termid":"MONDO:0004438","xrefs":{"Monarch":{"xref_id":"0004438"}}}


id: GO:0052519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by symbiont","termid":"GO:0052460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by symbiont","synonyms":[{"name":"activation by host of nutrient release from symbiont","type":"narrow"},{"name":"positive regulation by host of nutrient release from symbiont","type":"exact"},{"name":"promotion of nutrient release from symbiont","type":"exact"},{"name":"stimulation by host of nutrient release from symbiont","type":"narrow"},{"name":"up regulation by host of nutrient release from symbiont","type":"exact"},{"name":"up-regulation by host of nutrient release from symbiont","type":"exact"},{"name":"upregulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052519"}


id: PBO:0025417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Nhe1/Sod2","termid":"PBO:0025417"}


id: MONDO:0009065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cystinosis, nephropathic (obsolete MONDO:0009065)","termid":"MONDO:0009065","xrefs":{"Monarch":{"xref_id":"0009065"}}}


id: MOD:01333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C labeled L-isoleucine.","definition_xrefs":["PubMed:12716131","PubMed:12766232","Unimod:188#I"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-isoleucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01333"}


id: PBO:0048004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 4B","termid":"PBO:0048004"}


id: GO:0032341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"mineralocorticoid metabolic process","termid":"GO:0008212"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"aldosterone metabolic process","synonyms":[{"name":"aldosterone metabolism","type":"exact"}],"termid":"GO:0032341"}


id: PBO:0027837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cortical_microtubule_cytoskeleton","termid":"PBO:0027837"}


id: GO:0075284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a multicellular or syncytial spore via septations derived from mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"},{"relation_name":"is_a","term_name":"sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075284"}


id: PBO:0004185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta catalytic subunit Cdc6","termid":"PBO:0004185"}


id: MONDO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of cerebral palsy characterized by spasticity and hypertonia of the lower extremities bilaterally, particularly the legs, hips, and pelvis; this is the most common (70%) form of cerebral palsy.","definition_xrefs":["NCIT:C34781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic diplegia","secondary_identifiers":["MEDGEN:124371","MESH:C537945","DOID:10965","SCTID:281411007","SCTID:58193001","UMLS:C0270804","ICD9:343.0","MONDO:0022698"],"synonyms":[{"name":"Little disease","type":"exact"},{"name":"Little's disease","type":"exact"},{"name":"cerebral palsy spastic diplegic","type":"related"},{"name":"cerebral spastic infantile paralysis","type":"exact"},{"name":"diplegic infantile cerebral palsy","type":"exact"},{"name":"infantile diplegic cerebral palsy","type":"exact"},{"name":"infantile spastic cerebral palsy","type":"exact"}],"termid":"MONDO:0001167","xrefs":{"Monarch":{"xref_id":"0001167"}}}


id: FYPO:0007012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 28S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mature 28S rRNA level","synonyms":[{"name":"normal 28S rRNA level","type":"broad"},{"name":"normal mature 28S rRNA accumulation","type":"related"},{"name":"normal mature 28S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 28S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 28S rRNA transcript level","type":"exact"}],"termid":"FYPO:0007012"}


id: FYPO:0006619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated messenger RNA (mRNA) measured in the nucleus is normal (i.e. indistinguishable from wild type). Total mRNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"normal nuclear poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"normal nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"normal nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"normal nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"normal nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006619"}


id: PBO:0017998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein Erb1 (predicted)","termid":"PBO:0017998"}


id: MONDO:1010677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtia, non-human animal","termid":"MONDO:1010091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, sheep","secondary_identifiers":["OMIA:001952-9940"],"termid":"MONDO:1010677","xrefs":{"Monarch":{"xref_id":"1010677"}}}


id: PBO:0060238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein C1","termid":"PBO:0060238"}


id: MONDO:0032907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic malformation 8","secondary_identifiers":["MEDGEN:1684767","OMIM:618773","UMLS:C5231496"],"synonyms":[{"name":"LMPHM8","type":"related"},{"name":"LYMPHATIC MALFORMATION 8","type":"related"}],"termid":"MONDO:0032907","xrefs":{"Monarch":{"xref_id":"0032907"}}}


id: PBO:0088066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; cleaves ubiquitin from ubiquitinated proteins; present in the nucleus and cytoplasm","termid":"PBO:0088066"}


id: GO:0034466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a chromaffin granule.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"chromaffin granule","termid":"GO:0042583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromaffin granule lumen","termid":"GO:0034466"}


id: GO:0005072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Activity of any of the molecules that transmit the signal from a TGF-beta receptor through the cytoplasm to the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, cytoplasmic mediator activity (obsolete GO:0005072)","synonyms":[{"name":"TGF-beta receptor, cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, cytoplasmic mediator activity","type":"exact"}],"termid":"GO:0005072"}


id: PBO:0046267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 6","termid":"PBO:0046267"}


id: GO:0070815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + 2-oxoglutarate + O2 = (5S)-5-hydroxy-L-lysyl-[protein] + succinate + CO2.","definition_xrefs":["PMID:19574390","RHEA:58360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"peptidyl-lysine 5-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9630022"],"synonyms":[{"name":"lysine hydroxylase activity","type":"broad"},{"name":"lysine,2-oxoglutarate 5-dioxygenase activity","type":"broad"},{"name":"lysine-2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"lysyl hydroxylase activity","type":"broad"},{"name":"peptide-lysine 5-dioxygenase activity","type":"exact"},{"name":"peptidyl-lysine, 2-oxoglutarate: oxygen oxidoreductase activity","type":"related"},{"name":"peptidyllysine, 2-oxoglutarate:oxygen 5-oxidoreductase activity","type":"related"},{"name":"protein lysine hydroxylase activity","type":"exact"}],"termid":"GO:0070815"}


id: GO:0051189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prosthetic group metabolic process","synonyms":[{"name":"coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"coenzyme and prosthetic group metabolism","type":"broad"},{"name":"prosthetic group metabolism","type":"exact"}],"termid":"GO:0051189"}


id: PBO:0081212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger matrin-type 2","termid":"PBO:0081212"}


id: MOD:01614
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycyl phospho-5'-adenosine.","definition_xrefs":["RESID:AA0511","PubMed:16388576","PubMed:9632726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycyl phospho-5'-adenosine","synonyms":[{"name":"glycyladenylate","type":"exact"},{"name":"(2-aminoacetyl)oxy-([(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy)phosphinic acid","type":"exact"},{"name":"([(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl)-2-aminoethanoate","type":"exact"},{"name":"5'-adenylic-glyinate","type":"exact"},{"name":"MOD_RES Glycyl adenylate","type":"exact"},{"name":"aminoacetyl [5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl hydrogen phosphate","type":"exact"},{"name":"glycine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"glycyl 5'-adenylate","type":"exact"},{"name":"glycyl adenosine-5'-phosphate","type":"exact"},{"name":"glycyl phospho-5'-adenosine","type":"exact"}],"termid":"MOD:01614"}


id: SO:0000893
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated at transcriptional or translational level.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced","secondary_identifiers":["http://en.wikipedia.org/wiki/Silenced"],"termid":"SO:0000893"}


id: PBO:0032712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032712"}


id: PBO:0017040
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GAR1","termid":"PBO:0017040"}


id: GO:0033015
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"tetrapyrrole catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrapyrrole breakdown","type":"exact"},{"name":"tetrapyrrole catabolism","type":"exact"},{"name":"tetrapyrrole degradation","type":"exact"}],"termid":"GO:0033015","terms_by_termid":{"GO:0042167":null}}


id: GO:0045880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway","secondary_identifiers":["GO:0045878"],"synonyms":[{"name":"activation of smoothened signaling pathway","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway","type":"exact"},{"name":"positive regulation of hh signaling pathway","type":"exact"},{"name":"positive regulation of smoothened by patched","type":"related"},{"name":"positive regulation of smoothened receptor activity by patched","type":"related"},{"name":"positive regulation of smoothened signalling pathway","type":"exact"},{"name":"stimulation of smoothened signaling pathway","type":"narrow"},{"name":"up regulation of smoothened signaling pathway","type":"exact"},{"name":"up-regulation of smoothened signaling pathway","type":"exact"},{"name":"upregulation of smoothened signaling pathway","type":"exact"}],"termid":"GO:0045880"}


id: PBO:0065915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGEF1 pseudogene 1","termid":"PBO:0065915"}


id: PBO:0112691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex, GTPase regulator subunit Vtc1","termid":"PBO:0112691"}


id: PBO:0066237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 44","termid":"PBO:0066237"}


id: GO:0046047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of TTP, ribosylthymine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate catabolic process","termid":"GO:0009210"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"TTP metabolic process","termid":"GO:0046046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"TTP catabolic process","synonyms":[{"name":"TTP breakdown","type":"exact"},{"name":"TTP catabolism","type":"exact"},{"name":"TTP degradation","type":"exact"},{"name":"TTP hydrolysis","type":"exact"}],"termid":"GO:0046047"}


id: MONDO:0100033
data:
  {"annotated_genes":["SJAG_01881","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"Metabolic epilepsies are conceptualized as having a distinct metabolic abnormality that has been demonstrated to be associated with a substantially increased risk of developing epilepsy in appropriately designed studies. Metabolic disorders have genetic origin; however, the metabolic abnormalities are a separate disorder interposed between the genetic defect and the epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01881":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"metabolic epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843497","UMLS:C4524099"],"termid":"MONDO:0100033","terms_by_termid":{"MONDO:0012407":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0100033"}}}


id: MONDO:0035075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary early-onset glaucoma of genetic origin (obsolete MONDO:0035075)","secondary_identifiers":["Orphanet:522580"],"termid":"MONDO:0035075","xrefs":{"Monarch":{"xref_id":"0035075"}}}


id: GO:0035103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic release of a transcriptionally active sterol regulatory element binding protein (SREBP) from intracellular membranes, freeing it to move to the nucleus to upregulate transcription of target genes, in response to altered levels of one or more lipids.","definition_xrefs":["GOC:vw","GOC:bf","PMID:12923525"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element binding protein cleavage (obsolete GO:0035103)","synonyms":[{"name":"SREBP cleavage","type":"exact"},{"name":"sterol depletion response, SREBP cleavage","type":"exact"},{"name":"sterol regulatory element binding protein cleavage involved in ER-nuclear sterol response pathway","type":"narrow"}],"termid":"GO:0035103"}


id: PBO:0110106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi-specific 1-phosphatidylinositol 4-kinase, type III-beta Pik1","termid":"PBO:0110106"}


id: PBO:0088264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-amylase homolog Aah1","termid":"PBO:0088264"}


id: PBO:0049683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase like","termid":"PBO:0049683"}


id: PBO:0060203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 1","termid":"PBO:0060203"}


id: MONDO:0007751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hypercholesterolemia, autosomal dominant, type B","secondary_identifiers":["GARD:8588","SCTID:238081000","MEDGEN:309962","OMIM:144010","UMLS:C1704417"],"synonyms":[{"name":"apolipoprotein B-100, familial defective","type":"related"},{"name":"apolipoprotein B-100, familial ligand-defective","type":"related"},{"name":"hypercholesterolemia, autosomal dominant, type B","type":"exact"},{"name":"hypercholesterolemia, familial, 2","type":"exact"},{"name":"hypercholesterolemia, familial, due to ligand-defective apolipoprotein B","type":"related"}],"termid":"MONDO:0007751","xrefs":{"Monarch":{"xref_id":"0007751"}}}


id: MONDO:1040023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare genetic conditions caused by variants in the NDUFB11 gene. Presentation is heterogenous including neurologic, cardiac, ocular, and dermatological abnormalities.","definition_xrefs":["PMID:27102574","PMID:26741492","PMID:25772934","PMID:25921236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFB11-related disorders","termid":"MONDO:1040023","xrefs":{"Monarch":{"xref_id":"1040023"}}}


id: GO:0009312
data:
  {"annotated_genes":["SJAG_01427","SJAG_00182","SJAG_01862","SJAG_01646","SJAG_00129","SJAG_01209","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63240,62499,70709,69907,110720,69325,65510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9033658"],"synonyms":[{"name":"oligosaccharide anabolism","type":"exact"},{"name":"oligosaccharide biosynthesis","type":"exact"},{"name":"oligosaccharide formation","type":"exact"},{"name":"oligosaccharide synthesis","type":"exact"}],"termid":"GO:0009312","terms_by_termid":{"GO:0005992":null}}


id: PBO:0072686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNDC3A antisense RNA 1","termid":"PBO:0072686"}


id: GO:0019276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine metabolic process","synonyms":[{"name":"UDP-N-acetylgalactosamine metabolism","type":"exact"}],"termid":"GO:0019276"}


id: MONDO:1011347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Post-Covid-19 disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-viral disorder, non-human animal","termid":"MONDO:1011349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-COVID-19 disorder, non-human animal","termid":"MONDO:1011347","xrefs":{"Monarch":{"xref_id":"1011347"}}}


id: MONDO:0016042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset isolated ACTH deficiency is a rare, acquired, pituitary hormone deficiency characterized by secondary adrenal insufficiency, with normal secretion of anterior pituitary hormones, except for ACTH. Patients present with weakness, fatigue, weight loss, anorexia, vomiting/nausea, hypoglycemia, and abnormally low serum ACTH and cortisol levels. Association with autoimmune disease such as Hashimoto's thyroiditis has been described.","definition_xrefs":["Orphanet:199299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired pituitary hormone deficiency","termid":"MONDO:0019832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late-onset isolated ACTH deficiency","secondary_identifiers":["MEDGEN:1651973","GARD:20331","icd11.foundation:1651831896","UMLS:C4751433"],"termid":"MONDO:0016042","xrefs":{"Monarch":{"xref_id":"0016042"}}}


id: GO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of heart contraction as a result of the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate","termid":"GO:0010460"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate involved in baroreceptor response to decreased systemic arterial blood pressure","synonyms":[{"name":"activation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"narrow"},{"name":"positive control of heart contraction rate in baroreceptor response to decreased blood pressure","type":"exact"},{"name":"positive regulation of cardiac contraction rate in baroreceptor response to decreased blood pressure","type":"exact"},{"name":"positive regulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"related"},{"name":"stimulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"narrow"},{"name":"up regulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"exact"},{"name":"up-regulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"exact"},{"name":"upregulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"exact"}],"termid":"GO:0001988"}


id: MONDO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, follicular","secondary_identifiers":["MEDGEN:98025","NANDO:1200628","GARD:2355","UMLS:C0406344","SCTID:238627002"],"synonyms":[{"name":"follicular ichthyosis","type":"exact"}],"termid":"MONDO:0043094","xrefs":{"Monarch":{"xref_id":"0043094"}}}


id: MONDO:0007252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare multiple congenital malformation syndrome characterized by congenital contractures of hand and feet with variable degrees of severity of camptodactyly, clubfoot and, less frequently, cleft palate. Intelligence is normal but in some cases, additional abnormalities, such as short stature, kyphoscoliosis, ptosis, micrognathia, and cryptorchidism may also be present. Gordon syndrome, Marden-Walker syndrome and arthrogryposis with oculomotor limitation and electroretinal anomalies clinically and genetically overlap, and could represent variable expressions of the same condition.","definition_xrefs":["Orphanet:376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gordon syndrome","secondary_identifiers":["NORD:1199","DOID:0111607","MEDGEN:66314","SCTID:237850008","GARD:2553","ICD9:579.8","OMIM:114300","UMLS:C0220666","MESH:C537288"],"synonyms":[{"name":"DA3","type":"related"},{"name":"Gordon syndrome","type":"exact"},{"name":"arthrogryposis distal type 3","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2A","type":"related"},{"name":"arthrogryposis, distal, type 3","type":"related"},{"name":"camptodactyly, cleft palate, and clubfoot","type":"related"},{"name":"camptodactyly-cleft palate-clubfoot syndrome","type":"exact"},{"name":"distal arthrogryposis type 3","type":"exact"},{"name":"distal arthrogryposis type IIA","type":"exact"}],"termid":"MONDO:0007252","xrefs":{"Monarch":{"xref_id":"0007252"}}}


id: GO:0102514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanidin 3,7-di-O-beta-D-glucoside betaine + ferulate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity (obsolete GO:0102514)","termid":"GO:0102514"}


id: GO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fast-twitch skeletal muscle contraction.","definition_xrefs":["GOC:dph","GOC:mah","GOC:mtg_muscle","GOC:ef","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fast-twitch skeletal muscle fiber contraction","termid":"GO:0031446"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"positively_regulates","term_name":"fast-twitch skeletal muscle fiber contraction","termid":"GO:0031443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"activation of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"positive regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"stimulation of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"up regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"up-regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"upregulation of fast-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031448"}


id: GO:0050902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of loosely bound or rolling leukocytes by signals displayed on blood vessel endothelial cells, which is typically the second step in cellular extravasation.","definition_xrefs":["PMID:14708592","ISBN:0781735149","PMID:8600538","PMID:14680625","PMID:7507411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesive activation","synonyms":[{"name":"leukocyte adhesive triggering","type":"exact"}],"termid":"GO:0050902"}


id: PBO:0091907
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a disordered region N-terminal to the YTH domain stabilizes RNA binding, and becomes more ordered upon binding","termid":"PBO:0091907"}


id: GO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, which occurs as a dividing cell ages, leading to expression of genes that are typically not expressed due to silencing by regulatory proteins.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing involved in replicative cell aging (obsolete GO:0001308)","synonyms":[{"name":"loss of chromatin silencing during replicative cell ageing","type":"related"},{"name":"loss of chromatin silencing involved in replicative cell aging","type":"exact"}],"termid":"GO:0001308"}


id: PBO:0076077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stereocilin","termid":"PBO:0076077"}


id: PBO:0062900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase like domain containing 1","termid":"PBO:0062900"}


id: PBO:0079374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 9","termid":"PBO:0079374"}


id: MONDO:0016958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 7q duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the long arm (q) of chromosome 7. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 7q duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 7","termid":"MONDO:0016928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 7","secondary_identifiers":["UMLS:C0795821","MEDGEN:208637","MESH:C537821","GARD:5357","Orphanet:262887","icd11.foundation:462724513"],"synonyms":[{"name":"7q duplication","type":"related"},{"name":"7q trisomy","type":"related"},{"name":"Duplication 7q","type":"related"},{"name":"chromosome 7q duplication","type":"related"},{"name":"partial duplication of chromosome 7q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 7","type":"exact"},{"name":"partial trisomy 7q","type":"related"},{"name":"partial trisomy of chromosome 7q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 7","type":"exact"},{"name":"trisomy 7q","type":"related"}],"termid":"MONDO:0016958","xrefs":{"Monarch":{"xref_id":"0016958"}}}


id: MONDO:0009255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Galactokinase deficiency is a rare mild form of galactosemia characterized by early onset of cataract and an absence of the usual signs of classic galactosemia, i.e. feeding difficulties, poor weight gain and growth, lethargy, and jaundice.","definition_xrefs":["Orphanet:79237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia","termid":"MONDO:0018116"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"galactokinase deficiency","secondary_identifiers":["DOID:14695","NANDO:2200533","UMLS:C0268155","GARD:2422","icd11.foundation:1173858031","MEDGEN:120614","NCIT:C114767","OMIM:230200","SCTID:124302001"],"synonyms":[{"name":"GALK deficiency","type":"exact"},{"name":"GALK-D","type":"exact"},{"name":"Galk deficiency","type":"related"},{"name":"galactokinase deficiency","type":"exact"},{"name":"galactokinase deficiency galactosemia","type":"exact"},{"name":"galactokinase deficiency with cataracts","type":"exact"},{"name":"galactosemia 2","type":"related"},{"name":"galactosemia II","type":"exact"},{"name":"galactosemia type 2","type":"exact"},{"name":"hereditary galactokinase deficiency","type":"related"}],"termid":"MONDO:0009255","xrefs":{"Monarch":{"xref_id":"0009255"}}}


id: MONDO:0010205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolman disease with hypolipoproteinemia and acanthocytosis (obsolete MONDO:0010205)","termid":"MONDO:0010205","xrefs":{"Monarch":{"xref_id":"0010205"}}}


id: GO:0052713
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphorylceramide + H2O = C26-phytoceramide + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphosphingolipid phospholipase activity","termid":"GO:0052712"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol phosphorylceramide phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052713","terms_by_termid":{"GO:0052714":null}}


id: PBO:0073752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 7","termid":"PBO:0073752"}


id: PBO:0080520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 2, pseudogene","termid":"PBO:0080520"}


id: PBO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Prr1","termid":"PBO:0002167"}


id: MONDO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malaria that involves infection with more than one species of Plasmodium at the same time.","definition_xrefs":["DOID:14325","PMID:15105024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"mixed malaria","secondary_identifiers":["MEDGEN:509155","SCTID:21070001","UMLS:C0153121","ICD9:084.5"],"synonyms":[{"name":"malaria by more than one parasite","type":"exact"},{"name":"malaria fever by more than one parasite","type":"exact"}],"termid":"MONDO:0001944","xrefs":{"Monarch":{"xref_id":"0001944"}}}


id: PBO:0028329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_telomere_separation","termid":"PBO:0028329"}


id: GO:1902769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of choline O-acetyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:mr","GOC:TermGenie","PMID:7576634"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of choline O-acetyltransferase activity (obsolete GO:1902769)","synonyms":[{"name":"regulation of CHOACTase activity","type":"exact"},{"name":"regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"regulation of choline acetylase activity","type":"exact"},{"name":"regulation of choline acetyltransferase activity","type":"exact"}],"termid":"GO:1902769"}


id: MONDO:0022982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete die Smulders Vles Fryns syndrome (obsolete MONDO:0022982)","termid":"MONDO:0022982","xrefs":{"Monarch":{"xref_id":"0022982"}}}


id: PATO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000881 gestational period value (obsolete PATO:0000881)","termid":"PATO:0000881"}


id: PBO:0066999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA component of signal recognition particle 7SL3","termid":"PBO:0066999"}


id: MONDO:0030012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diets-Jongmans syndrome","secondary_identifiers":["MEDGEN:1714920","UMLS:C5394263","OMIM:618846"],"synonyms":[{"name":"DIETS-JONGMANS SYNDROME","type":"exact"},{"name":"DIJOS","type":"exact"},{"name":"Intellectual Developmental Disorder With Distinctive Facial Dysmorphism","type":"exact"},{"name":"diets-jongmans syndrome","type":"exact"}],"termid":"MONDO:0030012","xrefs":{"Monarch":{"xref_id":"0030012"}}}


id: MONDO:0010639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngeal abductor paralysis-intellectual disability syndrome is characterized by congenital and permanent laryngeal abductor paralysis, associated, in the majority of cases, with intellectual deficit. It has been described in several families. X-linked inheritance is likely.","definition_xrefs":["Orphanet:2375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal abductor paralysis-intellectual disability syndrome","secondary_identifiers":["UMLS:C5886766","SCTID:724178000","GARD:16597","MEDGEN:1855824","OMIM:308850"],"synonyms":[{"name":"Plott syndrome","type":"exact"},{"name":"laryngeal abductor paralysis","type":"related"},{"name":"vocal cord dysfunction, familial","type":"related"}],"termid":"MONDO:0010639","xrefs":{"Monarch":{"xref_id":"0010639"}}}


id: GO:0031540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin biosynthetic process","synonyms":[{"name":"regulation of anthocyanin anabolism","type":"exact"},{"name":"regulation of anthocyanin biosynthesis","type":"exact"},{"name":"regulation of anthocyanin formation","type":"exact"},{"name":"regulation of anthocyanin synthesis","type":"exact"}],"termid":"GO:0031540"}


id: MONDO:0022946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness progressive cataract autosomal dominant","termid":"MONDO:0022946","xrefs":{"Monarch":{"xref_id":"0022946"}}}


id: GO:0036387
data:
  {"annotated_genes":["SJAG_01354","SJAG_03451","SJAG_02607","SJAG_04062","SJAG_01762","SJAG_05301","SJAG_02348","SJAG_00884","SJAG_01267","SJAG_04210","SJAG_00857","SJAG_02074","SJAG_02394","SJAG_02800","SJAG_03927"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58561,109863,73355,67267,105115,57188,112385,109645,113215,115011,113472,61783,61725,63569,75461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005656"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex that forms at the origin of replication during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["GOC:bhm","GOC:bf","GOC:jh2","Wikipedia:Pre-replication_complex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02074":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04062":null,"SJAG_04210":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pre-replicative complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"pre-RC","type":"exact"},{"name":"pre-replication complex","type":"exact"}],"termid":"GO:0036387","terms_by_termid":{"GO:0005656":null}}


id: FYPO:0003565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during meiosis I","synonyms":[{"name":"increased protein phosphorylation during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003565"}


id: PBO:0060562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 6","termid":"PBO:0060562"}


id: PATO:0002171
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being split on two side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split","termid":"PATO:0001786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split bilaterally","termid":"PATO:0002171"}


id: FYPO:0008409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ketoconazole than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to ketoconazole","termid":"FYPO:0008409"}


id: SO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The peptide twists in an anticlockwise, left handed manner. The dihedral angles for this turn are: Residue(i): -140 degrees < chi(1) -120 degrees < -20 degrees, -90 degrees psi +120 degrees < +40 degrees, residue(i+1): -140 degrees < phi < -20 degrees, -90 < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine_threonine_turn","termid":"SO:0001141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"st_turn_left_handed_type_one","secondary_identifiers":["BS:00234"],"synonyms":[{"name":"st turn left handed type one","type":"exact"},{"name":"st_turn_il","type":"exact"}],"termid":"SO:0001142"}


id: PBO:0026672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_plus-end_directed_mitotic_chromosome_migration","termid":"PBO:0026672"}


id: GO:0099503
data:
  {"annotated_genes":["SJAG_04509","SJAG_01189"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89650,117307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070382"}]},"cv_name":"cellular_component","definition":"A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01189":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"secretory vesicle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099503","terms_by_termid":{"GO:0070382":null}}


id: GO:0031669
data:
  {"annotated_genes":["SJAG_02474","SJAG_02424","SJAG_00169","SJAG_00209","SJAG_04067","SJAG_01245","SJAG_00457","SJAG_02026","SJAG_02699","SJAG_03486","SJAG_00781","SJAG_03371","SJAG_03519","SJAG_03602","SJAG_02331","SJAG_04677","SJAG_00380","SJAG_01184","SJAG_01509","SJAG_00256","SJAG_02389","SJAG_02785","SJAG_02380","SJAG_00845","SJAG_01885","SJAG_04743","SJAG_04873","SJAG_02878","SJAG_03048","SJAG_00534","SJAG_00233","SJAG_02973","SJAG_03309","SJAG_02292","SJAG_04031","SJAG_01970","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73816,97005,75680,96455,73217,62838,75335,77585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[58906,102226,71690,100209,77735,77768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[95884,114632,79408,102275,59553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[109387,73916,115176,115177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[73310,82125,74213,80033,96403,78126,78872,76406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[117429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[68055,71031],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903833"},{"annotations":[103184,89618],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[104185],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01885":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02292":null,"SJAG_02331":null,"SJAG_02380":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02474":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_02878":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_03602":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nutrient levels","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0031669","terms_by_termid":{"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0042149":null,"GO:1903833":null,"GO:1904547":null,"GO:1905287":null}}


id: PBO:0067089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 125, pseudogene","termid":"PBO:0067089"}


id: MONDO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, papillary neoplasm that arises from the cervix. It is characterized by the presence of a fibrovascular core covered by mucinous epithelial cells.","definition_xrefs":["NCIT:C40215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical benign neoplasm","termid":"MONDO:0000644"},{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical mullerian papilloma","secondary_identifiers":["UMLS:C1516427","DOID:9442","MEDGEN:273910"],"synonyms":[{"name":"cervical Muellerian papilloma","type":"exact"},{"name":"cervical Mullerian papilloma","type":"exact"},{"name":"cervical Müllerian papilloma","type":"exact"}],"termid":"MONDO:0004787","xrefs":{"Monarch":{"xref_id":"0004787"}}}


id: PBO:0066800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 99","termid":"PBO:0066800"}


id: PR:Q9C0V1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- amt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB1C11.01","synonyms":[{"name":"Spom972h-amt1","type":"exact"}],"termid":"PR:Q9C0V1"}


id: PBO:0047162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member B","termid":"PBO:0047162"}


id: GO:0072270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a short nephron in the metanephros over time, from its formation to the mature structure. Short nephrons are associated with mid-cortical and superficial glomeruli, are situated entirely in the outer medulla, and have no thin ascending limb.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short nephron development","termid":"GO:0072030"},{"relation_name":"is_a","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric short nephron development","termid":"GO:0072270"}


id: GO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of the adult pattern of pigmentation in the cuticle of an organism.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chitin-based cuticle tanning","termid":"GO:0045800"},{"relation_name":"is_a","term_name":"negative regulation of cuticle pigmentation","termid":"GO:0048080"},{"relation_name":"is_a","term_name":"regulation of adult chitin-containing cuticle pigmentation","termid":"GO:0048082"},{"relation_name":"negatively_regulates","term_name":"adult chitin-containing cuticle pigmentation","termid":"GO:0048085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adult chitin-containing cuticle pigmentation","synonyms":[{"name":"down regulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"down-regulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"downregulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"inhibition of adult chitin-containing cuticle pigmentation","type":"narrow"}],"termid":"GO:0048083"}


id: PBO:0082470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-dependent protein kinase; may play a role in stress response, many Ca++/calmodulin dependent phosphorylation substrates demonstrated in vitro, amino acid sequence similar to mammalian Cam Kinase II; CMK1 has a paralog, CMK2, that arose from the whole genome duplication","termid":"PBO:0082470"}


id: PBO:0034245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_assembly_of","termid":"PBO:0034245"}


id: GO:0071272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphine metabolic process","secondary_identifiers":["Wikipedia:Morphine"],"synonyms":[{"name":"morphine metabolism","type":"exact"}],"termid":"GO:0071272"}


id: MONDO:0005425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of the lymphatic vessels of the lower extremities that is caused by chronic exposure to irritant soils.","definition_xrefs":["Wikipedia:Podoconiosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elephantiasis","termid":"MONDO:0005424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"podoconiosis","secondary_identifiers":["DOID:0050138","SCTID:47595008","UMLS:C1280469","EFO:0004712","MEDGEN:473377","ICD9:457.1"],"synonyms":[{"name":"elephantiasis from soil","type":"exact"},{"name":"non-filarial elephantiasis","type":"exact"},{"name":"nonfilarial elephantiasis","type":"exact"},{"name":"soil elephantiasis","type":"exact"}],"termid":"MONDO:0005425","xrefs":{"Monarch":{"xref_id":"0005425"}}}


id: PBO:0039278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 7, pseudogene","termid":"PBO:0039278"}


id: PBO:0030972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation","termid":"PBO:0030972"}


id: PBO:0074110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 2","termid":"PBO:0074110"}


id: PBO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 19","termid":"PBO:0052374"}


id: PR:O13688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse6 gene.","definition_xrefs":["UniProtKB:O13688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.08c","synonyms":[{"name":"Spom972h-nse6","type":"exact"},{"name":"core protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-SMC element 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13688"}


id: MONDO:0021002
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"A disease characterized by the presence of syndactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"syndactyly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:Q70","ICD9:755.1","MEDGEN:52619","MESH:D013576","HP:0001159","MedDRA:10042778","DOID:11193","UMLS:C0039075"],"synonyms":[{"name":"syndactyly (disease)","type":"exact"}],"termid":"MONDO:0021002","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0021002"}}}


id: PBO:0078395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 5-1","termid":"PBO:0078395"}


id: GO:0019838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"growth factor binding","synonyms":[{"name":"neurotrophin TRK receptor activity","type":"related"}],"termid":"GO:0019838"}


id: PBO:0070823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene","termid":"PBO:0070823"}


id: MONDO:0056819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the nasal cavity or paranasal sinuses.","definition_xrefs":["NCIT:C54293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"nasal cavity and paranasal sinus neoplasm","termid":"MONDO:0056820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity and paranasal sinus carcinoma","secondary_identifiers":["MEDGEN:328032","UMLS:C1710095"],"synonyms":[{"name":"nasal cavity and paranasal sinus cancer","type":"exact"},{"name":"nasal cavity and paranasal sinus carcinoma","type":"exact"},{"name":"paranasal sinus and nasal cavity cancer","type":"exact"},{"name":"sinonasal carcinoma","type":"exact"}],"termid":"MONDO:0056819","xrefs":{"Monarch":{"xref_id":"0056819"}}}


id: PBO:0050000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone cell cycle regulator pseudogene 1","termid":"PBO:0050000"}


id: PBO:0056312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 6","termid":"PBO:0056312"}


id: MONDO:0006365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartomatous polyp that occurs in the stomach, small and large intestines, and rarely within the esophagus, nasopharynx and the urinary tract. The Peutz-Jeghers polyps are grossly lobulated and dark. Microscopically, they have a central core of smooth muscle covered by mucosa. The smooth muscle shows tree-like branching. The question of whether or not the Peutz-Jeghers polyp is precancerous is a matter of controversy. The loss of heterozygosity on chromosome 19p (where the responsible gene LKB1 is located) suggests that the increased risk of malignancy may be due to malignant transformation from hamartoma to adenocarcinoma. --2002","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal hamartoma","termid":"MONDO:0006231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Peutz-Jeghers polyp","secondary_identifiers":["NCIT:C4733","EFO:1000470","UMLS:C0456487","MEDGEN:141582"],"synonyms":[{"name":"Peutz Jeghers polyp","type":"exact"},{"name":"Peutz-Jeghers polyp","type":"exact"}],"termid":"MONDO:0006365","xrefs":{"Monarch":{"xref_id":"0006365"}}}


id: GO:0006703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrogen metabolic process","termid":"GO:0008210"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"estrogen biosynthetic process","secondary_identifiers":["Reactome:R-HSA-193144"],"synonyms":[{"name":"estrogen anabolism","type":"exact"},{"name":"estrogen biosynthesis","type":"exact"},{"name":"estrogen formation","type":"exact"},{"name":"estrogen synthesis","type":"exact"},{"name":"oestrogen biosynthesis","type":"exact"},{"name":"oestrogen biosynthetic process","type":"exact"}],"termid":"GO:0006703"}


id: PBO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like protein","termid":"PBO:0005146"}


id: PBO:0030475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_vacuole","termid":"PBO:0030475"}


id: MONDO:0013910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the KISS1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 8 with or without anosmia","secondary_identifiers":["ICD10CM:E23.0","MEDGEN:766755","OMIM:614837","UMLS:C3553841","DOID:0090074","GARD:15849"],"synonyms":[{"name":"HH8","type":"related"},{"name":"KISS1R hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 8 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in KISS1R","type":"exact"}],"termid":"MONDO:0013910","xrefs":{"Monarch":{"xref_id":"0013910"}}}


id: GO:0070941
data:
  {"annotated_genes":["SJAG_04227","SJAG_02626","SJAG_02707","SJAG_02338"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71477,73034,105669,119693],"is_not":false,"summary":null,"term":"GO:0070941"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eisosome, a cell part that is composed of the eisosome membrane and eisosome filaments. The eisosome membrane, also called the MCC domain, is a furrow-like plasma membrane sub-domain with associated integral transmembrane proteins. The eisosome filaments form a scaffolding lattice on the cytoplasmic face of the membrane.","definition_xrefs":["GOC:al","GOC:jp","GOC:mah","PMID:19564405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02338":null,"SJAG_02626":null,"SJAG_02707":null,"SJAG_04227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"eisosome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070941","terms_by_termid":{"GO:0070941":null}}


id: PBO:0078583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 56","termid":"PBO:0078583"}


id: MONDO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cronkhite-Canada syndrome (CCS) is a rare gastrointestinal (GI) polyposis syndrome characterized by the association of non-hereditary GI polyposis with the cutaneous triad of alopecia, nail changes and hyperpigmentation.","definition_xrefs":["Orphanet:2930"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"gastric hamartomatous polyp","termid":"MONDO:0006224"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004335"],"is_obsolete":false,"name":"Cronkhite-Canada syndrome","secondary_identifiers":["MedDRA:10062907","OMIM:175500","UMLS:C0282207","SCTID:76304001","DOID:6225","MEDGEN:129128","MESH:D044483","NCIT:C7035","NORD:1017","icd11.foundation:79007466","GARD:4427","NANDO:1200901"],"synonyms":[{"name":"Cronkhite-Canada disease","type":"related"},{"name":"Cronkhite-Canada syndrome","type":"exact"},{"name":"gastric Cronkhite Canada polyposis","type":"exact"},{"name":"gastrointestinal polyposis-ectodermal changes syndrome","type":"exact"},{"name":"gastrointestinal polyposis-skin pigmentation-alopecia-fingernail changes syndrome","type":"exact"},{"name":"polyposis skin pigmentation alopecia fingernail changes","type":"related"},{"name":"polyposis, skin pigmentation, alopecia, and fingernail changes","type":"related"}],"termid":"MONDO:0008283","xrefs":{"Monarch":{"xref_id":"0008283"}}}


id: PBO:0045647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 5","termid":"PBO:0045647"}


id: MONDO:0025986
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703","SJAG_03145","SJAG_01665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88288,88289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0025708"},{"annotations":[88292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030296"},{"annotations":[88080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030329"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01665":null,"SJAG_02431":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1608393","OMIMPS:249210","MEDGEN:296125"],"termid":"MONDO:0025986","terms_by_termid":{"MONDO:0025708":null,"MONDO:0030296":null,"MONDO:0030329":null},"xrefs":{"Monarch":{"xref_id":"0025986"}}}


id: MONDO:0013957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a selective susceptibility to relatively mild infections with bacillus Calmette-Guerin (BCG).","definition_xrefs":["Orphanet:319600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to partial IRF8 deficiency","secondary_identifiers":["UMLS:C3808589","MEDGEN:814919","DOID:0111986","OMIM:614893"],"synonyms":[{"name":"CD11c-positive/CD1c-positive Dendritic cell deficiency, autosomal dominant","type":"related"},{"name":"IMD32A","type":"related"},{"name":"IRF8 autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"IRF8 deficiency, autosomal dominant","type":"related"},{"name":"MSMD due to partial IRF8 deficiency","type":"exact"},{"name":"MSMD due to partial interferon regulatory factor 8 deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to partial interferon regulatory factor 8 deficiency","type":"exact"},{"name":"autosomal dominant mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IRF8","type":"exact"},{"name":"immunodeficiency 32A","type":"related"},{"name":"immunodeficiency 32A, Mycobacteriosis, autosomal dominant","type":"related"},{"name":"immunodeficiency type 32A","type":"exact"}],"termid":"MONDO:0013957","xrefs":{"Monarch":{"xref_id":"0013957"}}}


id: MONDO:0003779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gliomatosis cerebri (obsolete MONDO:0003779)","termid":"MONDO:0003779","xrefs":{"Monarch":{"xref_id":"0003779"}}}


id: PBO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs2","termid":"PBO:0001858"}


id: PBO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUreobasidin A Resistance","termid":"PBO:0016892"}


id: PBO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 47","termid":"PBO:0045857"}


id: MONDO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An labyrinthitis caused by infection with Viruses.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labyrinthitis","termid":"MONDO:0002008"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"ear infection","termid":"MONDO:0021666"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral labyrinthitis","secondary_identifiers":["ICD9:386.35","ICD10CM:A88.1","MEDGEN:509997","DOID:12357","SCTID:409711008","UMLS:C0155508"],"synonyms":[{"name":"Viruses caused labyrinthitis","type":"exact"},{"name":"Viruses labyrinthitis","type":"exact"},{"name":"epidemic vertigo","type":"exact"},{"name":"epidemic vertigo (finding)","type":"exact"}],"termid":"MONDO:0001507","xrefs":{"Monarch":{"xref_id":"0001507"}}}


id: FYPO:0004004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal pre-replicative complex assembly","synonyms":[{"name":"normal pre-RC assembly","type":"exact"},{"name":"normal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"normal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"normal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0004004"}


id: MONDO:0016620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetically and clinically heterogeneous inherited disorder characterized by digital clubbing and osteoarthropathy, with variable features of pachydermia, delayed closure of the fontanels, and congenital heart disease. There are two types of PHO: pachydermoperiostosis and cranio-osteoarthropathy.","definition_xrefs":["Orphanet:248095"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"excluded_subClassOf","term_name":"dermis disorder","termid":"MONDO:0021154"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypertrophic osteoarthropathy","secondary_identifiers":["SCTID:88220006","UMLS:C0029411","NCIT:C85023","GARD:20667","NANDO:2100288","OMIMPS:259100","NANDO:2201004","NANDO:1200642","MEDGEN:18210","MedDRA:10051686","MESH:D010004","Orphanet:2796","DOID:14283","icd11.foundation:792225761"],"synonyms":[{"name":"PDP","type":"exact"},{"name":"PHO","type":"exact"},{"name":"PHOAR1","type":"related"},{"name":"Touraine Solente Gole syndrome","type":"exact"},{"name":"Touraine-Solente-Gole syndrome","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary","type":"exact"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, 1","type":"related"},{"name":"hypertrophic osteoarthropathy, primary, autosomal recessive, type 1","type":"exact"},{"name":"hypertropic osteoarthropathy, primary","type":"exact"},{"name":"idiopathic hypertrophic osteoarthropathy","type":"exact"},{"name":"pachydermoperiostosis","type":"exact"},{"name":"pachydermoperiostosis of nail","type":"exact"},{"name":"pachydermoperiostosis of nail [ambiguous]","type":"exact"},{"name":"pachydermoperiostosis syndrome","type":"exact"}],"termid":"MONDO:0016620","xrefs":{"Monarch":{"xref_id":"0016620"}}}


id: PBO:0063163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 8","termid":"PBO:0063163"}


id: GO:0048066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the deposition of coloring matter in an organism, tissue or cell.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental pigmentation","synonyms":[{"name":"pigmentation during development","type":"related"}],"termid":"GO:0048066"}


id: PBO:0053971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1282","termid":"PBO:0053971"}


id: PBO:0043799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPLANE1 antisense RNA 1","termid":"PBO:0043799"}


id: FYPO:0003018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to non-ionic osmotic stress.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to non-ionic osmotic stress (obsolete FYPO:0003018)","synonyms":[{"name":"elongated inviable cell during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell during cellular response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0003018"}


id: PBO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug68","termid":"PBO:0016933"}


id: PBO:0089972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-M, glycosylphosphatidylinositol-mannosyltransferase I complex subunit pig-M","termid":"PBO:0089972"}


id: PBO:0042617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneodesmosin","termid":"PBO:0042617"}


id: PBO:0076636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 3","termid":"PBO:0076636"}


id: MONDO:0016972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 22","secondary_identifiers":["UMLS:C5679699","MEDGEN:1826033","Orphanet:263004","GARD:20891"],"synonyms":[{"name":"partial duplication of chromosome 22q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 22","type":"exact"},{"name":"partial trisomy of chromosome 22q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 22","type":"exact"}],"termid":"MONDO:0016972","xrefs":{"Monarch":{"xref_id":"0016972"}}}


id: GO:0006554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lysine catabolic process","secondary_identifiers":["Reactome:R-HSA-71064"],"synonyms":[{"name":"lysine breakdown","type":"exact"},{"name":"lysine catabolism","type":"exact"},{"name":"lysine degradation","type":"exact"}],"termid":"GO:0006554"}


id: PBO:0054606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2011","termid":"PBO:0054606"}


id: GO:1900319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from dimethylamine","synonyms":[{"name":"down regulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"down-regulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"downregulation of methane biosynthetic process from dimethylamine","type":"exact"},{"name":"inhibition of methane biosynthetic process from dimethylamine","type":"narrow"}],"termid":"GO:1900319"}


id: MONDO:0035136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"melanotic neurilemmoma","termid":"MONDO:0002558"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"isolated melanotic schwannoma","secondary_identifiers":["Orphanet:590539","GARD:22368"],"termid":"MONDO:0035136","xrefs":{"Monarch":{"xref_id":"0035136"}}}


id: PBO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme import protein Shu1","termid":"PBO:0018218"}


id: MONDO:0019143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A foodborne zoonotic disease, endemic to Southeast Asia and the Pacific Islands, caused by the rat lungworm Angiostrongylus cantonensis and that is acquired by the ingestion of the infective larvae on vegetables or in raw or undercooked snails, slugs, land crabs, freshwater shrimps, frogs and lizards. The main feature is eosinophilic meningitis, with clinical manifestations including fever, headache, malaise, fatigue, vomiting, rhinorrhea, blurred vision, diplopia, cough, stiff neck, enteritis, constipation and paraesthesia due to the movement of the worms from the intestines to the lungs, central nervous system and eyes. In severe cases without treatment, coma and death can occur.","definition_xrefs":["Orphanet:74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiostrongyliasis","secondary_identifiers":["MEDGEN:98230","MESH:C536369","NCIT:C128394","DOID:0050256","SCTID:61750000","icd11.foundation:1768378720","MedDRA:10069517","UMLS:C0392662","ICD9:128.8","GARD:683"],"termid":"MONDO:0019143","xrefs":{"Monarch":{"xref_id":"0019143"}}}


id: PBO:0064355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain containing 2","termid":"PBO:0064355"}


id: PBO:0045995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2B","termid":"PBO:0045995"}


id: PBO:0026849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_snRNA_gene","termid":"PBO:0026849"}


id: PATO:0000772
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A preference quality in a bearer by virtue of the bearer's having no preference to a perceived stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preference","termid":"PATO:0000773"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indifference","termid":"PATO:0000772"}


id: FYPO:0002220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more meiotic cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of cell cycle phase","termid":"FYPO:0000408"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase","termid":"FYPO:0002738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of meiotic cell cycle phase","synonyms":[{"name":"prolonged meiotic cell cycle phase","type":"exact"}],"termid":"FYPO:0002220"}


id: PBO:0027554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_during_recovery_from_nitrogen_starvation","termid":"PBO:0027554"}


id: PBO:0032758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase Pgs1 (predicted)","termid":"PBO:0032758"}


id: PBO:0044345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 29","termid":"PBO:0044345"}


id: PBO:0056558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 6","termid":"PBO:0056558"}


id: PBO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc2 (predicted)","termid":"PBO:0002257"}


id: PBO:0070397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORB antisense RNA 1","termid":"PBO:0070397"}


id: GO:0023022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The signaling process in which T cell signal transduction is brought to an end rather than being reversibly modulated.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of signal transduction","termid":"GO:0023021"},{"relation_name":"is_a","term_name":"negative regulation of T cell receptor signaling pathway","termid":"GO:0050860"},{"relation_name":"part_of","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"termination of T cell signal transduction","termid":"GO:0023022"}


id: GO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a pilus, a short filamentous structure of bacterial cell, flagella-like in structure and generally present in many copies. Pili are variously involved in transfer of nucleic acids, adherence to surfaces, and formation of pellicles. Is required for bacterial conjugation, or can play a role in adherence to surfaces (when it is called a fimbrium), and in the formation of pellicles.","definition_xrefs":["GOC:mcc2","GOC:tb","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"pilus organization","termid":"GO:0043711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pilus assembly","synonyms":[{"name":"fimbria assembly","type":"narrow"},{"name":"fimbria biogenesis","type":"related"},{"name":"fimbriae assembly","type":"narrow"},{"name":"fimbriae biogenesis","type":"related"},{"name":"fimbrial assembly","type":"narrow"},{"name":"fimbrium assembly","type":"narrow"},{"name":"fimbrium biogenesis","type":"related"},{"name":"pilus biogenesis","type":"related"},{"name":"pilus formation","type":"exact"}],"termid":"GO:0009297"}


id: GO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the distal tubule over time, from its formation to the mature structure. In mammals, the distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule development","termid":"GO:0072017"}


id: PBO:0070845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 24","termid":"PBO:0070845"}


id: GO:1990923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of at least EXD1, TDRD12 and some PIWI protein. The complex is required for MILI slicing-triggered biogenesis and loading of MIWI2 piRNAs.","definition_xrefs":["PMID:26669262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PET complex","termid":"GO:1990923"}


id: PBO:0070332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 4","termid":"PBO:0070332"}


id: PBO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.29","termid":"PBO:0000673"}


id: GO:0006804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxidase reaction (obsolete GO:0006804)","synonyms":[{"name":"peroxidase reaction","type":"exact"}],"termid":"GO:0006804"}


id: PBO:0119998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNE1 antisense RNA 2","termid":"PBO:0119998"}


id: _global:directly_associated_with
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 directly_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 increases if the magnitude of q2 is increased, or the magnitude of q1 decreases if the magnitude of q2 is decreased. The relationship is not necessarily linear.","definition_xrefs":["Wikipedia:Association_(statistics)","PATOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_associated_with","termid":"_global:directly_associated_with"}


id: PBO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_transport","termid":"PBO:0031715"}


id: PBO:0064090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein membrane associated 2","termid":"PBO:0064090"}


id: MONDO:0012206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, primary bone dysplasia disorder characterized by early-onset, progressive pseudorheumatoid arthritis, platyspondyly, and hypoplasia/dysplasia of the third and fourth metatarsals, in the absence of ophthalmologic, cleft palate, and height anomalies.","definition_xrefs":["Orphanet:137678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"},{"relation_name":"is_a","term_name":"COL2A1-related spondyloepiphyseal dysplasia","termid":"MONDO:0100602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with metatarsal shortening","secondary_identifiers":["MEDGEN:324580","OMIM:609162","GARD:10220","SCTID:720826006","UMLS:C1836683","MESH:C535766","NANDO:2201353"],"synonyms":[{"name":"Czech dysplasia","type":"exact"},{"name":"Czech dysplasia metatarsal type","type":"exact"},{"name":"Czech dysplasia, metatarsal type","type":"exact"},{"name":"SED with metatarsal shortening","type":"exact"},{"name":"pseudorheumatoid dysplasia progressive, with hypoplastic toes","type":"related"},{"name":"pseudorheumatoid dysplasia, progressive, with hypoplastic toes","type":"exact"},{"name":"spondyloepiphyseal dysplasia with precocious osteoarthritis","type":"exact"}],"termid":"MONDO:0012206","xrefs":{"Monarch":{"xref_id":"0012206"}}}


id: PBO:0017633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase Ipp1 (predicted)","termid":"PBO:0017633"}


id: PBO:0076345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 12","termid":"PBO:0076345"}


id: PBO:0080001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase10 pseudogene 2","termid":"PBO:0080001"}


id: MONDO:0001453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral retinal degeneration","termid":"MONDO:0001451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile reticular retinal degeneration","secondary_identifiers":["UMLS:C0154857","ICD9:362.64","SCTID:54184008","MEDGEN:509687","DOID:12163"],"synonyms":[{"name":"Senile reticular degeneration of retina","type":"exact"}],"termid":"MONDO:0001453","xrefs":{"Monarch":{"xref_id":"0001453"}}}


id: FYPO:0001395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal activation of monopolar cell growth","synonyms":[{"name":"normal activation of monopolar vegetative cell growth","type":"exact"},{"name":"normal initiation of growth from old end following cell division","type":"exact"}],"termid":"FYPO:0001395"}


id: PBO:0051939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2A","termid":"PBO:0051939"}


id: PBO:0114418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER antisense RNA 1","termid":"PBO:0114418"}


id: GO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids that contributes to endoplasmic reticulum membrane organization.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization","synonyms":[{"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090159"}


id: MONDO:0011294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation on chromosome 6q13-q26.","definition_xrefs":["DOID:0070081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 5","secondary_identifiers":["MEDGEN:350351","OMIM:603175","UMLS:C1864153"],"synonyms":[{"name":"SCZD5","type":"exact"},{"name":"schizophrenia 5","type":"exact"},{"name":"schizophrenia 5 with or without an affective disorder","type":"related"},{"name":"schizophrenia susceptibility locus, chromosome 6Q-related","type":"related"}],"termid":"MONDO:0011294","xrefs":{"Monarch":{"xref_id":"0011294"}}}


id: MONDO:0016666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unexplained long-lasting fever/inflammatory syndrome","secondary_identifiers":["GARD:20699","MEDGEN:1842329","Orphanet:251332","UMLS:C5679630"],"termid":"MONDO:0016666","xrefs":{"Monarch":{"xref_id":"0016666"}}}


id: GO:0098574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of lysosomal membrane","synonyms":[{"name":"external leaflet of lysosomal membrane","type":"exact"},{"name":"external side of lysosomal membrane","type":"exact"}],"termid":"GO:0098574"}


id: PBO:0005381
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombe glycoprotease","termid":"PBO:0005381"}


id: GO:0010788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of cis-Golgi to rough ER transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","termid":"GO:0048206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, cis-Golgi to rough ER","termid":"GO:0010788"}


id: PR:O59755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom972h-cut12","type":"exact"},{"name":"cell untimely torn protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59755"}


id: MONDO:1010773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus, non-human animal","termid":"MONDO:1010138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, domestic cat","secondary_identifiers":["OMIA:001188-9685"],"termid":"MONDO:1010773","xrefs":{"Monarch":{"xref_id":"1010773"}}}


id: PBO:0041083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 transcriptional repressor and anoikis regulator","termid":"PBO:0041083"}


id: PBO:0036093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K12_acetylation_during_vegetative_growth","termid":"PBO:0036093"}


id: MONDO:0003274
data:
  {"annotated_genes":["SJAG_02426","SJAG_04114","SJAG_03453","SJAG_00757","SJAG_04394","SJAG_03720","SJAG_00079","SJAG_04206","SJAG_01410","SJAG_00229","SJAG_03689","SJAG_02460","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89091,89088,89089,87938,87940,89087,87937,87941,87939,89090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"},{"annotations":[88554,89106,88553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the tissues of the thorax.","definition_xrefs":["NCIT:C3576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00229":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thoracic cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:188361007","UMLS:C0153661","DOID:5093","ICD9:195.1","MEDGEN:56320","ICD10CM:C76.1"],"synonyms":[{"name":"cancer of thoracic segment of trunk","type":"exact"},{"name":"malignant neoplasm of the thorax","type":"exact"},{"name":"malignant neoplasm of thoracic segment of trunk","type":"exact"},{"name":"malignant neoplasm of thorax","type":"exact"},{"name":"malignant thoracic neoplasm","type":"exact"},{"name":"malignant thoracic segment of trunk neoplasm","type":"exact"},{"name":"malignant thoracic tumor","type":"exact"},{"name":"malignant thoracic tumour","type":"exact"},{"name":"malignant tumor of the thorax","type":"exact"},{"name":"malignant tumor of thorax","type":"exact"},{"name":"malignant tumour of the thorax","type":"exact"},{"name":"malignant tumour of thorax","type":"exact"},{"name":"thoracic segment of trunk cancer","type":"exact"},{"name":"thoracic tumor","type":"broad"},{"name":"thoracic tumour","type":"broad"},{"name":"thorax cancer","type":"exact"},{"name":"thorax neoplasm","type":"broad"},{"name":"tumor of thorax","type":"broad"},{"name":"tumour of thorax","type":"broad"}],"termid":"MONDO:0003274","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null,"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0003274"}}}


id: PBO:0048328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 39","termid":"PBO:0048328"}


id: GO:0070505
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A layer of extracellular matrix deposited onto the surface of the pollen wall upon disintegration of the tapetal layer of the anther wall in the late stages of pollen development. The composition of this material is highly heterogeneous and includes waxes, lipid droplets, small aromatic molecules, and proteins. The pollen coat is proposed to have many functions, such as holding pollen in the anther until dispersal, facilitation of pollen dispersal, protection of pollen from water loss and UV radiation, and facilitation of adhesion of pollen to the stigma.","definition_xrefs":["PMID:15012271","GOC:rph","PMID:12930826","GOC:mah","PMID:28955324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen coat","synonyms":[{"name":"pollenkitt","type":"exact"},{"name":"tryphine","type":"exact"}],"termid":"GO:0070505"}


id: PBO:0058481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5588","termid":"PBO:0058481"}


id: MONDO:0020677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden hearing loss disorder","secondary_identifiers":["SCTID:79471008","UMLS:C0011057","MEDGEN:41426"],"termid":"MONDO:0020677","xrefs":{"Monarch":{"xref_id":"0020677"}}}


id: PBO:0079610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2H divergent transcript","termid":"PBO:0079610"}


id: GO:2000644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor catabolic process","synonyms":[{"name":"regulation of receptor breakdown","type":"exact"},{"name":"regulation of receptor catabolism","type":"exact"},{"name":"regulation of receptor degradation","type":"exact"}],"termid":"GO:2000644"}


id: PBO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein","termid":"PBO:0005119"}


id: PR:Q9US37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.04 gene.","definition_xrefs":["UniProtKB:Q9US37","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1039.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.04","synonyms":[{"name":"Spom972h-SPAC1039.04","type":"exact"}],"termid":"PR:Q9US37"}


id: MONDO:0005866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by Mycobacterium avium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium avium complex disease","secondary_identifiers":["NCIT:C36197","SCTID:373436002","MESH:D015270","UMLS:C0026916","DOID:2755","ICD9:031.8","MEDGEN:6478","EFO:0007386"],"synonyms":[{"name":"DMAC","type":"related"},{"name":"MAC disease","type":"exact"},{"name":"Mycobacterium avium Complex","type":"exact"},{"name":"Mycobacterium avium complex caused disease or disorder","type":"exact"},{"name":"Mycobacterium avium complex disease or disorder","type":"exact"},{"name":"Mycobacterium avium complex infectious disease","type":"exact"},{"name":"Mycobacterium avium infection","type":"exact"},{"name":"disseminated infection with mycobacterium avium complex","type":"related"},{"name":"infection due to Mycobacterium intracellulare","type":"exact"}],"termid":"MONDO:0005866","xrefs":{"Monarch":{"xref_id":"0005866"}}}


id: FYPO:0004569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the meiotic spindle is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle during meiosis I","synonyms":[{"name":"normal meiosis I spindle","type":"exact"},{"name":"normal meiotic spindle during meiosis I","type":"exact"},{"name":"normal spindle during first meiotic nuclear division","type":"related"}],"termid":"FYPO:0004569"}


id: MONDO:0015841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Partial septate uterus is a rare, non-syndromic uterovaginal malformation characterized by a uterus that has a longitudinal septum which extends from the uterine fundus and does not reach the internal cervical os (variable lengths and widths may be observed). Although frequently asymptomatic, an increased risk of poor reproductive outcome has been observed. Urinary tract abnormalities are very rarely associated.","definition_xrefs":["Orphanet:180129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate uterus","termid":"MONDO:0015839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial septate uterus","secondary_identifiers":["SCTID:5364006","GARD:20182","MEDGEN:539894","UMLS:C0266401"],"synonyms":[{"name":"subtotal septate uterus","type":"exact"},{"name":"uterus subseptus","type":"exact"}],"termid":"MONDO:0015841","xrefs":{"Monarch":{"xref_id":"0015841"}}}


id: GO:0034766
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92988,115199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane ion transport","type":"exact"},{"name":"down-regulation of transmembrane ion transport","type":"exact"},{"name":"downregulation of transmembrane ion transport","type":"exact"},{"name":"inhibition of transmembrane ion transport","type":"narrow"},{"name":"negative regulation of ion membrane transport","type":"exact"},{"name":"negative regulation of ion transmembrane transport","type":"broad"},{"name":"negative regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034766","terms_by_termid":{"GO:1905949":null}}


id: MONDO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Renal Glucosuria (FRG) is characterized by the presence of persistent isolated glucosuria in the absence of both generalized proximal tubular dysfunction and hyperglycemia. FRG is usually considered a benign entity as most patients are not affected by severe clinical consequences. Polyuria and enuresis and later a mild growth and pubertal maturation delay are the only manifestations that have been reported during a follow-up period of 30 years. Episodic dehydration and ketosis during pregnancy and starvation and an increased incidence of urinary tract infections have occasionally been reported in severe cases. FRG is caused by loss-of-function mutations in the gene SLC5A2 (16p11.2).","definition_xrefs":["Orphanet:69076"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"glucose transport disorder","termid":"MONDO:0019226"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"familial renal glucosuria","secondary_identifiers":["OMIM:233100","icd11.foundation:381783069","MEDGEN:757652","UMLS:C3245525","SCTID:267430007","DOID:9432","GARD:7548","MedDRA:10038457","MESH:D006030","NORD:1658","ICD9:271.4"],"synonyms":[{"name":"GLYS","type":"related"},{"name":"Glys1","type":"related"},{"name":"Renal Glycosuria","type":"exact"},{"name":"SGLT2 deficiency","type":"exact"},{"name":"familial renal glucosuria","type":"exact"},{"name":"glycosuria, renal","type":"related"},{"name":"renal diabetes","type":"exact"},{"name":"renal glucosuria","type":"related"},{"name":"renal glycosuria","type":"related"}],"termid":"MONDO:0009297","xrefs":{"Monarch":{"xref_id":"0009297"}}}


id: GO:0009537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The precursor of other plastids.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proplastid","termid":"GO:0009537"}


id: GO:0008194
data:
  {"annotated_genes":["SJAG_02916","SJAG_04881","SJAG_00129","SJAG_00876","SJAG_03587","SJAG_05285","SJAG_00442","SJAG_01427","SJAG_01028","SJAG_00394","SJAG_00183","SJAG_04236","SJAG_03311","SJAG_06383","SJAG_01288","SJAG_02804","SJAG_03057","SJAG_02222","SJAG_04184","SJAG_03066","SJAG_01531","SJAG_04119","SJAG_04571","SJAG_02913","SJAG_04821","SJAG_04868"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76467,115002,81704,77525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[80541,95119,102850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[75038,73100,75210,80467,72313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047657"},{"annotations":[117663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[76129,75921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[68106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[107570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"},{"annotations":[64304,100463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[94770,94860,110401,113432,79155,119086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"},{"annotations":[81235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycosyl group from a UDP-sugar to a small hydrophobic molecule.","definition_xrefs":["PMID:11846783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00183":null,"SJAG_00394":null,"SJAG_00442":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_02222":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03066":null,"SJAG_03311":null,"SJAG_03587":null,"SJAG_04119":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_04821":null,"SJAG_04868":null,"SJAG_04881":null,"SJAG_05285":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"UDP-glycosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162730"],"termid":"GO:0008194","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004100":null,"GO:0004577":null,"GO:0004581":null,"GO:0017176":null,"GO:0047220":null,"GO:0047657":null,"GO:0140752":null}}


id: MONDO:1010477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arrhythmogenic right ventricular cardiomyopathy that occurs in chimpanzee.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arrhythmogenic right ventricular cardiomyopathy, non-human animal","termid":"MONDO:1010019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmogenic right ventricular cardiomyopathy, chimpanzee","secondary_identifiers":["OMIA:000878-9598"],"termid":"MONDO:1010477","xrefs":{"Monarch":{"xref_id":"1010477"}}}


id: PBO:0076119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 3","termid":"PBO:0076119"}


id: MONDO:0008407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of desmin","termid":"MONDO:0016187"},{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurogenic scapuloperoneal syndrome, Kaeser type","secondary_identifiers":["Orphanet:85146","UMLS:C1867005","GARD:10312","MEDGEN:356670","DOID:0111551","MESH:C566695","OMIM:181400"],"synonyms":[{"name":"Kaeser syndrome","type":"exact"},{"name":"SCPNK","type":"related"},{"name":"scapuloperoneal syndrome, neurogenic type, of Kaeser","type":"related"},{"name":"scapuloperoneal syndrome, neurogenic, Kaeser type","type":"related"},{"name":"stark-Kaeser syndrome","type":"exact"}],"termid":"MONDO:0008407","xrefs":{"Monarch":{"xref_id":"0008407"}}}


id: GO:1900315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltopentaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentasaccharide transport","termid":"GO:1900360"},{"relation_name":"regulates","term_name":"maltopentaose transport","termid":"GO:2001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of maltopentaose transport","termid":"GO:1900315"}


id: GO:1901346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of vasculature development that is involved in developing an avascular cornea of a camera-type eye.","definition_xrefs":["GOC:TermGenie","PMID:16849433","GOC:uh","PMID:17051153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vasculature development","termid":"GO:1901343"},{"relation_name":"part_of","term_name":"avascular cornea development in camera-type eye","termid":"GO:0036331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasculature development involved in avascular cornea development in camera-type eye","synonyms":[{"name":"down regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"down regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"down regulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"down regulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"down-regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"down-regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"down-regulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"down-regulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"downregulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"downregulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"downregulation of vasculature development involved in avascular cornea development","type":"exact"},{"name":"downregulation of vasculature development involved in avascular cornea development in camera-type eye","type":"exact"},{"name":"inhibition of vascular system development involved in avascular cornea development","type":"related"},{"name":"inhibition of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"inhibition of vasculature development involved in avascular cornea development","type":"narrow"},{"name":"inhibition of vasculature development involved in avascular cornea development in camera-type eye","type":"narrow"},{"name":"negative regulation of vascular system development involved in avascular cornea development","type":"related"},{"name":"negative regulation of vascular system development involved in avascular cornea development in camera-type eye","type":"related"},{"name":"negative regulation of vasculature development involved in avascular cornea development","type":"exact"}],"termid":"GO:1901346"}


id: MONDO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A allergic disease that involves the digestive tract.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"gastrointestinal allergy","secondary_identifiers":["UMLS:C0221034","DOID:0060502","MEDGEN:1843477"],"synonyms":[{"name":"allergic disease of digestive tract","type":"exact"},{"name":"digestive tract allergic disease","type":"exact"}],"termid":"MONDO:0000777","xrefs":{"Monarch":{"xref_id":"0000777"}}}


id: MONDO:0004758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized defect in the visual field bordered by an area of normal vision. This occurs with a variety of eye diseases (e.g., retinal diseases and glaucoma); optic nerve diseases, and other conditions.","definition_xrefs":["MESH:D012607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scotoma","secondary_identifiers":["UMLS:C0036454","ICD9:368.43","ICD9:368.42","ICD9:368.45","HP:0000575","DOID:9335","ICD10CM:H53.42","ICD9:368.44","MEDGEN:19902"],"synonyms":[{"name":"blind spot area scotoma","type":"exact"},{"name":"enlarged angioscotoma","type":"exact"},{"name":"enlarged blind spot","type":"exact"},{"name":"enlarged paracaecal scotoma","type":"exact"},{"name":"generalised visual field contraction or constriction","type":"exact"},{"name":"generalized visual field contraction or constriction","type":"exact"},{"name":"scotoma","type":"exact"},{"name":"scotoma (disease)","type":"exact"},{"name":"scotoma of blind spot area","type":"exact"},{"name":"sector or arcuate visual field defects","type":"exact"}],"termid":"MONDO:0004758","xrefs":{"Monarch":{"xref_id":"0004758"}}}


id: MONDO:1010566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, Japanese quail","secondary_identifiers":["OMIA:000278-93934"],"termid":"MONDO:1010566","xrefs":{"Monarch":{"xref_id":"1010566"}}}


id: PR:O14146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 51 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15954:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.10c","secondary_identifiers":["UniProtKB:O14146"],"synonyms":[{"name":"GARP complex subunit vps51 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC3G6.10c","type":"related"},{"name":"Spom972h-VPS51","type":"exact"}],"termid":"PR:O14146"}


id: MONDO:0032526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia 48","secondary_identifiers":["DOID:0111746","Orphanet:631103","MEDGEN:1648409","UMLS:C4748158","OMIM:618093"],"synonyms":[{"name":"SCA48","type":"related"},{"name":"SPINOCEREBELLAR ATAXIA 48","type":"related"}],"termid":"MONDO:0032526","xrefs":{"Monarch":{"xref_id":"0032526"}}}


id: MONDO:0100160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute disease characterized by severe ketoacidosis in the absence of diabetes mellitus and occurring in individuals with a history of prolonged excessive alcohol consumption. Disease manifestations include nausea, intractable vomiting, and abdominal pain. When treated, AKA resolves rapidly and completely with no apparent sequelae.","definition_xrefs":["PMID:16714496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidosis disorder","termid":"MONDO:0006022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"alcoholic ketoacidosis","secondary_identifiers":["MEDGEN:541151","UMLS:C0268039","DOID:0080949"],"synonyms":[{"name":"alcoholic acidosis","type":"exact"},{"name":"alcoholic ketosis","type":"exact"}],"termid":"MONDO:0100160","xrefs":{"Monarch":{"xref_id":"0100160"}}}


id: GO:1902961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24577224","GOC:TermGenie","GO_REF:0000059","GOC:sjp"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902961)","synonyms":[{"name":"activation of aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902961"}


id: PBO:0000949
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.5.1.1","termid":"PBO:0000949"}


id: MONDO:0000957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lacrimal passage granuloma","secondary_identifiers":["DOID:10174","UMLS:C0155253","ICD10CM:H04.81","ICD9:375.81","SCTID:417563003","MEDGEN:509875"],"synonyms":[{"name":"granuloma of lacrimal passages","type":"exact"}],"termid":"MONDO:0000957","xrefs":{"Monarch":{"xref_id":"0000957"}}}


id: PBO:0089528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNA associated protein Dip2","termid":"PBO:0089528"}


id: MONDO:1040046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the LZTFL1 gene.","definition_xrefs":["PMID:20301537","PMID:26216965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LZTFL1-related ciliopathy","synonyms":[{"name":"LZTFL1-related ciliopathy","type":"exact"}],"termid":"MONDO:1040046","xrefs":{"Monarch":{"xref_id":"1040046"}}}


id: MONDO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multinodular intermediate fibroblastic neoplasm arising from the retroperitoneum. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes and plasma cells.","definition_xrefs":["NCIT:C39741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retroperitoneal inflammatory myofibroblastic tumor","secondary_identifiers":["UMLS:C1514921","MEDGEN:271681","EFO:1000510"],"synonyms":[{"name":"retroperitoneal inflammatory myofibroblastic tumor","type":"exact"},{"name":"retroperitoneal space inflammatory myofibroblastic tumor","type":"exact"},{"name":"retroperitoneal space inflammatory myofibroblastic tumour","type":"exact"}],"termid":"MONDO:0006398","xrefs":{"Monarch":{"xref_id":"0006398"}}}


id: MONDO:0010186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets caused by a defect in the VDR gene, encoding the vitamin D receptor. This form of rickets is characterized by hypocalcemia, elevated 1,25-dihydroxyvitamin D (calcitriol) concentrations and may also manifest with alopecia.","definition_xrefs":["NCIT:C131075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D-dependent rickets, type 2","termid":"MONDO:0019642"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 2A","secondary_identifiers":["UMLS:C0342646","GARD:18169","MEDGEN:90989","MESH:C562794","OMIM:277440","DOID:0080884","SCTID:237894002"],"synonyms":[{"name":"Pddr 2A","type":"related"},{"name":"Pseudovitamin D-deficiency, type 2A","type":"related"},{"name":"VDDR2A","type":"related"},{"name":"VDR vitamin D-dependent rickets, type 2","type":"exact"},{"name":"generalised resistance to 1,25-dihydroxyvitamin D","type":"related"},{"name":"generalized resistance to 1,25-dihydroxyvitamin D","type":"related"},{"name":"hereditary 1,25 dihydroxyvitamin D-resistant rickets with abnormal vitamin D receptor with alopecia","type":"exact"},{"name":"hypocalcemic vitamin D-resistant rickets","type":"related"},{"name":"rickets, hereditary vitamin D-resistant","type":"related"},{"name":"rickets, vitamin D-resistant, type IIA","type":"exact"},{"name":"rickets-alopecia syndrome","type":"related"},{"name":"vitamin D dependent rickets 2a","type":"exact"},{"name":"vitamin D receptor deficiency rickets","type":"exact"},{"name":"vitamin D-dependent rickets, type 2 caused by mutation in VDR","type":"exact"},{"name":"vitamin D-dependent rickets, type 2A","type":"exact"},{"name":"vitamin D-dependent rickets, type 2A, with or without alopecia","type":"related"},{"name":"vitamin D-resistant rickets with end-organ unresponsiveness to 1,25-dihydroxycholecalciferol","type":"related"},{"name":"vitamin d-dependent rickets type II with alopecia","type":"exact"}],"termid":"MONDO:0010186","xrefs":{"Monarch":{"xref_id":"0010186"}}}


id: GO:0034630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a RITS complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RITS complex localization","synonyms":[{"name":"RITS complex localisation","type":"exact"},{"name":"establishment and maintenance of RITS complex localization","type":"exact"}],"termid":"GO:0034630"}


id: GO:0071484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to light intensity","termid":"GO:0071484"}


id: PR:O14140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome complex subunit DSS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16771:SF0","PRO:DNx","OMA:SCHPO02235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor dss1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.02","secondary_identifiers":["UniProtKB:O14140"],"synonyms":[{"name":"Spom972h-SHFM1","type":"exact"}],"termid":"PR:O14140"}


id: PBO:0061037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 3","termid":"PBO:0061037"}


id: PBO:0083144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF AIM10/YER087W","termid":"PBO:0083144"}


id: PBO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.55","termid":"PBO:0011450"}


id: FYPO:0006098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to cytoplasm","synonyms":[{"name":"abnormal protein localisation to cytoplasm","type":"exact"},{"name":"abnormal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006098"}


id: PBO:0056267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 3","termid":"PBO:0056267"}


id: GO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the attainment of the full functional capacity of angiotensin by conversion of angiotensinogen into mature angiotensin in the blood.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"},{"relation_name":"part_of","term_name":"regulation of angiotensin levels in blood","termid":"GO:0002002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"angiotensin maturation","secondary_identifiers":["Reactome:R-HSA-2022377","GO:0002005"],"synonyms":[{"name":"angiotensin catabolic process in blood","type":"narrow"}],"termid":"GO:0002003"}


id: MONDO:0018603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFTPC- related interstitial lung disease","secondary_identifiers":["Orphanet:440392","GARD:17744"],"synonyms":[{"name":"SFTPC-related ILD","type":"exact"},{"name":"interstitial lung disease due to SP-C deficiency","type":"exact"},{"name":"interstitial lung disease due to surfactant protein C deficiency","type":"exact"}],"termid":"MONDO:0018603","xrefs":{"Monarch":{"xref_id":"0018603"}}}


id: MONDO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific term referring to impaired vision. Major subcategories include stimulus deprivation-induced amblyopia and toxic amblyopia. Stimulus deprivation-induced amblyopia is a developmental disorder of the visual cortex. A discrepancy between visual information received by the visual cortex from each eye results in abnormal cortical development. strabismus and refractive errors may cause this condition. Toxic amblyopia is a disorder of the optic nerve which is associated with alcoholism, tobacco smoking, and other toxins and as an adverse effect of the use of some medications.","definition_xrefs":["MESH:D000550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amblyopia","termid":"MONDO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression amblyopia","secondary_identifiers":["DOID:10375","ICD10CM:H53.03","ICD9:368.01","UMLS:C0750903","SCTID:35600002","MEDGEN:152911"],"synonyms":[{"name":"strabismic amblyopia","type":"exact"}],"termid":"MONDO:0001019","xrefs":{"Monarch":{"xref_id":"0001019"}}}


id: GO:0045257
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id: PBO:0052986
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id: PBO:0051679
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id: GO:0098660
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id: PBO:0081602
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id: PBO:0044760
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id: PBO:0002976
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id: PR:O94666
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02787","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.08c","secondary_identifiers":["UniProtKB:O94666"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC158 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3A","type":"exact"}],"termid":"PR:O94666"}


id: GO:0003047
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id: GO:0047335
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id: GO:0006427
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id: GO:0006869
data:
  {"annotated_genes":["SJAG_02581","SJAG_02114","SJAG_00018","SJAG_04370","SJAG_01590","SJAG_03741","SJAG_01470","SJAG_03851","SJAG_01437","SJAG_01407","SJAG_03050","SJAG_05209","SJAG_16459","SJAG_00176","SJAG_03690","SJAG_04413","SJAG_05268","SJAG_03416","SJAG_01305","SJAG_01229","SJAG_01329","SJAG_03247","SJAG_02375","SJAG_03172","SJAG_02943","SJAG_00669","SJAG_02897","SJAG_01225","SJAG_03774","SJAG_00230","SJAG_03710","SJAG_01722","SJAG_02323","SJAG_00261","SJAG_04984","SJAG_02957","SJAG_06440","SJAG_03209","SJAG_01945","SJAG_00587","SJAG_01095","SJAG_01731","SJAG_02132","SJAG_00589","SJAG_02516","SJAG_03718","SJAG_03721","SJAG_00355","SJAG_04734","SJAG_01116","SJAG_03338","SJAG_00576","SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70166,63598,60403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[76454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015917"},{"annotations":[119361,74986,111444,74445,75421,75886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[96199,78741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[57389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120009"},{"annotations":[99271,99337,108552,111349,91001,100412,92671,109459,107653,118082,105838,110467,103073,102316,109335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[110021,108138,93254,111187,96018,118060,104409,113161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[78684,62947,73626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[102031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170046"},{"annotations":[74734,92286,73749,103075,76463,92290,92291,92287,74641,92288,111335,92289,101256,76219,92293,92292,92294,104009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[74915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00176":null,"SJAG_00230":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01116":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03247":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03690":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03774":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04734":null,"SJAG_04984":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1369062"],"termid":"GO:0006869","terms_by_termid":{"GO:0015917":null,"GO:0017121":null,"GO:0032366":null,"GO:0034203":null,"GO:0035621":null,"GO:0045332":null,"GO:0120009":null,"GO:0120010":null,"GO:0120011":null,"GO:0140331":null,"GO:0170046":null}}


id: GO:0106101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a peroxisome via the endoplasmic reticulum.","definition_xrefs":["PMID:19479899","PMID:26408931","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to peroxisome","termid":"GO:0072662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0007031","GO:0051179"],"is_obsolete":false,"name":"ER-dependent peroxisome localization","termid":"GO:0106101"}


id: PBO:0089781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery involved in ribosome biogenesis protein Lto1","termid":"PBO:0089781"}


id: MONDO:0020299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia type 15/16 (obsolete MONDO:0020299)","termid":"MONDO:0020299","xrefs":{"Monarch":{"xref_id":"0020299"}}}


id: PBO:0059146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase specific PLK1 interacting protein","termid":"PBO:0059146"}


id: MONDO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ehrlichiosis (obsolete MONDO:0000985)","termid":"MONDO:0000985","xrefs":{"Monarch":{"xref_id":"0000985"}}}


id: PBO:0082967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for replication of Brome mosaic virus; S. cerevisiae is a model system for studying replication of positive-strand RNA viruses in their natural hosts","termid":"PBO:0082967"}


id: PBO:0054120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1486","termid":"PBO:0054120"}


id: GO:0052399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of programmed cell death in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont programmed cell death (obsolete GO:0052399)","synonyms":[{"name":"activation by organism of symbiont programmed cell death","type":"exact"},{"name":"induction by organism of symbiont programmed cell death","type":"exact"}],"termid":"GO:0052399"}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA","GOC:rph","PMID:23496142","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: PBO:0066842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 142","termid":"PBO:0066842"}


id: GO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont phytoalexin production (obsolete GO:0052463)","synonyms":[{"name":"modulation by organism of symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052463"}


id: FYPO:0003367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize pyridoxine, and therefore requires pyridoxine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for pyridoxine","synonyms":[{"name":"growth auxotrophic for pyridoxine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for pyridoxine during vegetative growth","type":"exact"},{"name":"pyridoxine auxotrophy","type":"exact"}],"termid":"FYPO:0003367"}


id: GO:0016313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The removal of one of the phosphate groups from an inositol triphosphate to produce an inositol bisphosphate.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,5-trisphosphate phosphatase (obsolete GO:0016313)","synonyms":[{"name":"inositol-1,4,5-trisphosphate phosphatase","type":"exact"}],"termid":"GO:0016313"}


id: FYPO:0003980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}


id: PR:Q9P7D2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase methylesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14189:SF0","OMA:SCHPO03467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase methylesterase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.17c","secondary_identifiers":["UniProtKB:Q9P7D2"],"synonyms":[{"name":"PME-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPME1","type":"exact"}],"termid":"PR:Q9P7D2"}


id: MONDO:0014650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy characterized by autosomal dominant inheritance of complex partial seizures with occasional secondary generalization and that has material basis in heterozygous mutation in the GAL gene on chromosome 11q13.","definition_xrefs":["PMID:25691535","DOID:0060754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 8","secondary_identifiers":["GARD:16116","MEDGEN:909158","OMIM:616461","UMLS:C4225318"],"synonyms":[{"name":"ETL8","type":"exact"},{"name":"epilepsy, familial temporal lobe, 8","type":"related"},{"name":"epilepsy, familial temporal lobe, type 8","type":"exact"},{"name":"familial temporal lobe epilepsy type 8","type":"exact"}],"termid":"MONDO:0014650","xrefs":{"Monarch":{"xref_id":"0014650"}}}


id: PATO:0000947
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being oval with two axes of symmetry, as produced by a conical section.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elliptic","synonyms":[{"name":"ellipse-shaped","type":"exact"},{"name":"ellipsoid","type":"exact"},{"name":"elliptical","type":"exact"},{"name":"oval","type":"related"},{"name":"ovoid","type":"related"}],"termid":"PATO:0000947"}


id: MONDO:1011664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluten-sensitive enteropathy, non-human animal","secondary_identifiers":["OMIA:001261"],"termid":"MONDO:1011664","xrefs":{"Monarch":{"xref_id":"1011664"}}}


id: MONDO:0012370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 11p13-p12.","definition_xrefs":["PMID:16158433","DOID:0110508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 51","secondary_identifiers":["UMLS:C1864968","MESH:C538202","MEDGEN:355880","GARD:9918","OMIM:609941"],"synonyms":[{"name":"DFNB51","type":"narrow"},{"name":"autosomal recessive deafness 51","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 51","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 51","type":"narrow"},{"name":"deafness, autosomal recessive 51","type":"narrow"}],"termid":"MONDO:0012370","xrefs":{"Monarch":{"xref_id":"0012370"}}}


id: PBO:0056064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 4 pseudogene 1","termid":"PBO:0056064"}


id: MONDO:0006270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive adenocarcinoma of the breast characterized by a proliferation of monomorphic cells completely filling the lumina. The overall lobular architecture is preserved. It is frequently multifocal (90% in some series) and bilateral. It seldom becomes invasive; however there is an increased risk of infiltrating ductal adenocarcinoma.","definition_xrefs":["NCIT:C4018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobular neoplasia","termid":"MONDO:0002486"},{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lobular breast carcinoma in situ","secondary_identifiers":["ICD10CM:D05.0","EFO:1000326","MEDGEN:79007","ICDO:8520/2","ONCOTREE:LCIS","SCTID:109888004","UMLS:C0279563"],"synonyms":[{"name":"LCIS","type":"exact"},{"name":"breast lobular carcinoma in situ","type":"related"},{"name":"lobular Ca in situ of breast","type":"exact"},{"name":"lobular Ca in situ of the breast","type":"exact"},{"name":"lobular breast carcinoma in situ","type":"exact"},{"name":"lobular carcinoma in situ","type":"exact"},{"name":"lobular carcinoma in situ (LCIS)","type":"exact"},{"name":"lobular carcinoma in situ of breast","type":"exact"},{"name":"lobular carcinoma in situ of the breast","type":"exact"},{"name":"lobular carcinoma in situ of the breast (LCIS)","type":"exact"},{"name":"non-infiltrating lobular breast carcinoma","type":"exact"},{"name":"non-infiltrating lobular carcinoma","type":"exact"},{"name":"non-infiltrating lobular carcinoma of breast","type":"exact"},{"name":"non-infiltrating lobular carcinoma of the breast","type":"exact"},{"name":"non-invasive lobular breast carcinoma","type":"exact"},{"name":"non-invasive lobular carcinoma of breast","type":"exact"},{"name":"non-invasive lobular carcinoma of the breast","type":"exact"}],"termid":"MONDO:0006270","xrefs":{"Monarch":{"xref_id":"0006270"}}}


id: PBO:0090772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer alpha subunit Cop1","termid":"PBO:0090772"}


id: PBO:0078002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3IP2 antisense RNA 1","termid":"PBO:0078002"}


id: GO:0140718
data:
  {"annotated_genes":["SJAG_03624","SJAG_01075","SJAG_03255","SJAG_02382","SJAG_01579","SJAG_03844","SJAG_01331","SJAG_02622","SJAG_02778","SJAG_01867","SJAG_00769","SJAG_04039","SJAG_04186","SJAG_01599","SJAG_00934","SJAG_03664","SJAG_02723","SJAG_03997","SJAG_03982","SJAG_02401","SJAG_04768","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61238,95852],"is_not":false,"summary":null,"term":"GO:0140718"},{"annotations":[79032,108464],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[105887,74099,93849,113941,109976,115132,72632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[102092,93641,98967,119604,119974],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[89258,118380,105989,112313,92565,113943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[108118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"}]},"cv_name":"biological_process","definition":"The compaction of chromatin into a conformation that is refractory to transcription but that can be converted to euchromatin and allow transcription in specific contexts. These can be temporal (e.g., developmental states or specific cell-cycle stages), spatial (e.g., nuclear localization changes from the center to the periphery or vice versa due to exogenous factors/signals), or parental/heritable (e.g., monoallelic gene expression). In metazoa, this involves the methylation of histone H3K27.","definition_xrefs":["PMID:17936700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_00934":null,"SJAG_01075":null,"SJAG_01331":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02401":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"fHC assembly","type":"exact"},{"name":"facultative heterochromatin assembly","type":"exact"}],"termid":"GO:0140718","terms_by_termid":{"GO:0000183":null,"GO:0061188":null,"GO:0140718":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: PBO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 18, pseudogene","termid":"PBO:0070061"}


