# terms

id: FYPO:0002640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to clotrimazole. Cells stop growing (and may die) at a concentration of clotrimazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to clotrimazole","synonyms":[{"name":"hypersensitive to clotrimazole","type":"exact"},{"name":"sensitive to clotrimazole during mitotic cell cycle","type":"related"},{"name":"sensitive to clotrimazole during vegetative growth","type":"exact"}],"termid":"FYPO:0002640"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: MONDO:0007681
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88457],"is_not":false,"summary":null,"term":"MONDO:0007681"}]},"cv_name":"mondo","definition":"Any multinodular goiter in which the cause of the disease is a mutation in the DICER1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinodular goiter","termid":"MONDO:0000334"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"DICER1-related tumor predisposition","termid":"MONDO:0100216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"goiter, multinodular 1, with or without Sertoli-Leydig cell tumors","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:86230","SCTID:267369002","OMIM:138800","GARD:17278","ICD9:240.0","MESH:C562732","Orphanet:276399","UMLS:C0302859"],"synonyms":[{"name":"FMNG","type":"exact"},{"name":"MNG1","type":"exact"},{"name":"euthyroid goiter","type":"broad"},{"name":"euthyroid goitre","type":"broad"},{"name":"familial MNG","type":"exact"},{"name":"goiter, multinodular 1, with or without Sertoli-Leydig cell tumors","type":"exact"},{"name":"goiter, nontoxic, with Intrathyroidal calcification","type":"exact"},{"name":"multinodular goiter, adolescent","type":"exact"},{"name":"simple goiter","type":"broad"},{"name":"simple goitre","type":"broad"}],"termid":"MONDO:0007681","terms_by_termid":{"MONDO:0007681":null},"xrefs":{"Monarch":{"xref_id":"0007681"}}}


id: PBO:0065666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRN2 antisense RNA 1","termid":"PBO:0065666"}


id: PBO:0027983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_small_cell_with_abnormal_septum_morphology","termid":"PBO:0027983"}


id: GO:0031956
data:
  {"annotated_genes":["SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78581],"is_not":false,"summary":null,"term":"GO:0031956"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty acid + ATP + CoA = a medium-chain fatty acyl-CoA + AMP + diphosphate. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:48340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"medium-chain fatty acid-CoA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:6.2.1.2","Reactome:R-HSA-8875013"],"synonyms":[{"name":"medium-chain fatty acid activation","type":"related"},{"name":"medium-chain fatty-acid-CoA ligase activity","type":"exact"},{"name":"medium-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031956","terms_by_termid":{"GO:0031956":null}}


id: PBO:0048594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GH3 domain containing","termid":"PBO:0048594"}


id: PBO:0050582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 6","termid":"PBO:0050582"}


id: GO:1904386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:12112407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-phenylalanine derivative","termid":"GO:1904386"}


id: PBO:0057570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 765","termid":"PBO:0057570"}


id: MONDO:1010734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic lupus erythematosus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus, non-human animal","termid":"MONDO:1010118"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, domestic cat","secondary_identifiers":["OMIA:000968-9685"],"termid":"MONDO:1010734","xrefs":{"Monarch":{"xref_id":"1010734"}}}


id: PBO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.87","termid":"PBO:0000989"}


id: PBO:0038880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADCY6 divergent transcript","termid":"PBO:0038880"}


id: PBO:0054311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1703","termid":"PBO:0054311"}


id: PBO:0048620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 1","termid":"PBO:0048620"}


id: GO:1900758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of D-amino-acid oxidase activity (obsolete GO:1900758)","synonyms":[{"name":"down regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down regulation of new yellow enzyme","type":"related"},{"name":"down-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down-regulation of new yellow enzyme","type":"related"},{"name":"downregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"downregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"downregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"downregulation of new yellow enzyme","type":"related"},{"name":"inhibition of D-amino-acid oxidase activity","type":"narrow"},{"name":"inhibition of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"inhibition of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"inhibition of new yellow enzyme","type":"related"},{"name":"negative regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"negative regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"negative regulation of new yellow enzyme","type":"related"}],"termid":"GO:1900758"}


id: PBO:0058980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLIP antisense RNA 1","termid":"PBO:0058980"}


id: PBO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate lyase (predicted)","termid":"PBO:0003053"}


id: MOD:00276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, a lysine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:12709052","RESID:AA0271","PubMed:9237682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-lysine","synonyms":[{"name":"(19S,20S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-20-([(S)-5-amino-5-carboxypentyl]amino)-3,8,13,17-tetramethyl-21H,23H-19,20-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-N6-lysino-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"MOD:00276"}


id: GO:1905702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inhibitory synapse assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27779093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"regulates","term_name":"inhibitory synapse assembly","termid":"GO:1904862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of inhibitory synapse assembly","synonyms":[{"name":"regulation of inhibitory synapse formation","type":"exact"}],"termid":"GO:1905702"}


id: PR:Q9P6K6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv14 gene.","definition_xrefs":["UniProtKB:Q9P6K6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-derived vesicles protein erv14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30C2.05","synonyms":[{"name":"Spom972h-erv14","type":"exact"}],"termid":"PR:Q9P6K6"}


id: PBO:0087309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small heat shock protein (sHSP) with chaperone activity; forms hollow, sphere-shaped oligomers that suppress unfolded proteins aggregation; long-lived protein that is preferentially retained in mother cells and forms cytoplasmic foci; oligomer activation requires heat-induced conformational change; also has mRNA binding activity","termid":"PBO:0087309"}


id: MONDO:0008155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteomesopyknosis is a very rare benign bone disorder characterized by bone dysplasia manifested by patchy sclerosis of the axial skeleton and increased bone mineral content.","definition_xrefs":["Orphanet:2777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteomesopyknosis","secondary_identifiers":["MESH:C537792","SCTID:254125009","GARD:391","OMIM:166450","UMLS:C0432264","MEDGEN:98482","icd11.foundation:455371627"],"synonyms":[{"name":"axial osteosclerosis","type":"exact"},{"name":"osteomesopyknosis","type":"exact"}],"termid":"MONDO:0008155","xrefs":{"Monarch":{"xref_id":"0008155"}}}


id: GO:0001147
data:
  {"annotated_genes":["SJAG_04855","SJAG_02242","SJAG_03923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75995,76083,104081],"is_not":false,"summary":null,"term":"GO:0001147"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that promotes termination by RNA polymerase. The transcribed region might be described as a gene, cistron, or operon.","definition_xrefs":["GOC:txnOH","PMID:18391175","PMID:18280161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03923":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0000976","GO:0005488"],"is_obsolete":false,"name":"transcription termination site sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001148","GO:0001146","GO:0001145","GO:0001160"],"synonyms":[{"name":"bacterial-type RNA polymerase termination site sequence-specific DNA binding","type":"narrow"},{"name":"mitochondrial RNA polymerase termination site sequence-specific DNA binding","type":"narrow"},{"name":"mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"transcription factor activity, mitochondrial RNA polymerase terminator site sequence-specific binding","type":"narrow"},{"name":"transcription termination site DNA binding","type":"related"}],"termid":"GO:0001147","terms_by_termid":{"GO:0001147":null}}


id: MONDO:0015214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic visceral malformation (obsolete MONDO:0015214)","secondary_identifiers":["Orphanet:108973"],"termid":"MONDO:0015214","xrefs":{"Monarch":{"xref_id":"0015214"}}}


id: MONDO:0001203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"prolapse of lacrimal gland","secondary_identifiers":["ICD9:375.16","MEDGEN:509860","SCTID:84777002","UMLS:C0155231","DOID:11134"],"synonyms":[{"name":"dislocation of lacrimal gland","type":"exact"}],"termid":"MONDO:0001203","xrefs":{"Monarch":{"xref_id":"0001203"}}}


id: PBO:0029172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_protein_in_growth_medium","termid":"PBO:0029172"}


id: PBO:0073811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A14 pseudogene 2","termid":"PBO:0073811"}


id: GO:0047252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1->6)-alpha-D-mannosyloligosaccharide + beta-D-mannosylphosphodecaprenol = (1->6)-alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-oligosaccharide + decaprenol phosphate.","definition_xrefs":["EC:2.4.1.199","MetaCyc:2.4.1.199-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"beta-mannosylphosphodecaprenol-mannooligosaccharide 6-mannosyltransferase activity","synonyms":[{"name":"beta-D-mannosylphosphodecaprenol:1,6-alpha-D-mannosyloligosaccharide 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"mannosylphospholipid-methylmannoside alpha-1,6-mannosyltransferase activity","type":"related"}],"termid":"GO:0047252"}


id: GO:2000593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric DCT cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of metanephric DCT cell differentiation","termid":"GO:2000592"},{"relation_name":"negatively_regulates","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric DCT cell differentiation","synonyms":[{"name":"negative regulation of metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:2000593"}


id: MONDO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An unusual presentation of schistosomiasis characterized by a pruritic papular rash in the perigenital or periumbilical area due to an allergic reaction to schistosoma eggs deposited in the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"parasitic skin disorder","termid":"MONDO:0024610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cercarial dermatitis","secondary_identifiers":["MEDGEN:108186","SCTID:238534006","UMLS:C0546996","NCIT:C128349","GARD:9747","ICD9:709.8","ICD9:120.3","DOID:11302","ICD10CM:B65.3","icd11.foundation:648519873"],"synonyms":[{"name":"Sea bather's eruption","type":"exact"},{"name":"cutaneous schistosomiasis","type":"exact"},{"name":"duck Itch","type":"exact"},{"name":"lake Itch","type":"exact"},{"name":"swimmer's itch","type":"related"}],"termid":"MONDO:0001260","xrefs":{"Monarch":{"xref_id":"0001260"}}}


id: PBO:0091378
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds with high affinity to mammalian-type 5'-TTAGGG-3' telomeric repeats, and with very low affinity to less stringently conserved S. pombe telomeric repeats","termid":"PBO:0091378"}


id: MONDO:0060663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart defects, multiple types","termid":"MONDO:0000119"},{"relation_name":"is_a","term_name":"GATA5-related congenital heart defects","termid":"MONDO:0100541"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types, 5","secondary_identifiers":["UMLS:C4693563","MEDGEN:1636547","OMIM:617912"],"synonyms":[{"name":"CHTD5","type":"related"},{"name":"CONGENITAL heart defects, multiple types, 5","type":"related"}],"termid":"MONDO:0060663","xrefs":{"Monarch":{"xref_id":"0060663"}}}


id: FYPO:0001919
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121502],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is broken into multiple small fragments that are smaller than a normal nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"fragmented nucleus during vegetative growth","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"fragmented nuclear DNA during vegetative growth","type":"related"},{"name":"fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"loss of nuclear integrity during vegetative growth","type":"related"}],"termid":"FYPO:0001919","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003976":null}}


id: GO:1901460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to formic acid","termid":"GO:1901460"}


id: SO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that does not lead to any change in the amino acid sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous","termid":"SO:0001815"}


id: PBO:0078443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining 1","termid":"PBO:0078443"}


id: PBO:0046377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 1","termid":"PBO:0046377"}


id: FYPO:0001753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type) under anaerobic conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal anaerobic cell population growth","synonyms":[{"name":"normal anaerobic growth","type":"broad"}],"termid":"FYPO:0001753"}


id: GO:0014023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"primary neural tube formation","termid":"GO:0014020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural rod formation","termid":"GO:0014023"}


id: GO:1904296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmolarity-sensing cation channel activity.","definition_xrefs":["GOC:TermGenie","PMID:18279313","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmolarity-sensing cation channel activity (obsolete GO:1904296)","synonyms":[{"name":"down regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"down-regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"downregulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"inhibition of osmolarity-sensing cation channel activity","type":"narrow"}],"termid":"GO:1904296"}


id: MONDO:1011446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Medium-Chain acyl-CoA dehydrogenase deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medium-chain acyl-CoA dehydrogenase deficiency, non-human animal","secondary_identifiers":["OMIA:002585"],"termid":"MONDO:1011446","xrefs":{"Monarch":{"xref_id":"1011446"}}}


id: PBO:0079593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D4 (putative)","termid":"PBO:0079593"}


id: GO:1904129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["GOC:dph","GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in axis elongation","termid":"GO:1901234"},{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in somitogenesis","synonyms":[{"name":"activation of convergent extension involved in somitogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in somitogenesis","type":"exact"}],"termid":"GO:1904129"}


id: PBO:0051813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-triphosphate receptor associated 2","termid":"PBO:0051813"}


id: GO:0009983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal tyrosine from a peptide.","definition_xrefs":["ISBN:0198506732","GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine aminopeptidase activity (obsolete GO:0009983)","synonyms":[{"name":"tyrosine aminopeptidase activity","type":"exact"}],"termid":"GO:0009983"}


id: GO:0060100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"is_a","term_name":"positive regulation of membrane invagination","termid":"GO:1905155"},{"relation_name":"positively_regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"}


id: MONDO:0003674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the subendocardial layer of the wall of the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"subendocardial myocardial infarction","secondary_identifiers":["UMLS:C0262568","DOID:5849","MEDGEN:75500"],"synonyms":[{"name":"myocardial infarction (disease) of subendocardium layer","type":"exact"},{"name":"subendocardium layer myocardial infarction (disease)","type":"exact"}],"termid":"MONDO:0003674","xrefs":{"Monarch":{"xref_id":"0003674"}}}


id: PATO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000098 insecticide sensitivity (obsolete PATO:0000098)","termid":"PATO:0000098"}


id: MONDO:0008278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"juvenile polyposis syndrome","termid":"MONDO:0017380"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome","secondary_identifiers":["MESH:C563412","OMIM:175050","DOID:0111543","MEDGEN:331400","UMLS:C1832942"],"synonyms":[{"name":"JP/Hht syndrome","type":"related"},{"name":"JPHT","type":"related"},{"name":"jPS/Hht","type":"related"},{"name":"juvenile polyposis with hereditary hemorrhagic telangiectasia","type":"related"},{"name":"juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome","type":"exact"},{"name":"polyposis, generalised juvenile, with pulmonary arteriovenous malformation","type":"related"},{"name":"polyposis, generalized juvenile, with pulmonary arteriovenous malformation","type":"related"},{"name":"telangiectasia, hereditary hemorrhagic, with juvenile polyposis coli","type":"related"}],"termid":"MONDO:0008278","xrefs":{"Monarch":{"xref_id":"0008278"}}}


id: GO:1905392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a plant organ is generated and organized.","definition_xrefs":["GOC:TermGenie","GO_REF:0000083","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant organ morphogenesis","termid":"GO:1905392"}


id: PBO:0034253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_parallelism_relationship_with","termid":"PBO:0034253"}


id: MONDO:0024300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets due to low serum phosphate concentrations, the cause of which can be nutritional or genetic. This condition is characterized by normal parathyroid hormone concentrations, usually caused by renal phosphate wasting occurring in isolation or as part of a renal tubular disorder, and characterized by resistance to treatment with ultraviolet radiation or vitamin D.","definition_xrefs":["NCIT:C131449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rickets","termid":"MONDO:0005520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic rickets","secondary_identifiers":["NANDO:1200780","MESH:D063730","NANDO:1200778","NANDO:2200402","UMLS:C1704375","NANDO:2200403","MEDGEN:309957"],"synonyms":[{"name":"Phosphopenic rickets","type":"exact"},{"name":"Ricket, hypophosphatemic","type":"related"},{"name":"acquired vitamin D resistant rickets","type":"narrow"},{"name":"acquired vitamin D-resistant rickets","type":"narrow"},{"name":"hypophosphatemia, vitamin D-resistant rickets","type":"related"},{"name":"hypophosphatemic Ricket","type":"related"},{"name":"hypophosphatemic rickets","type":"exact"},{"name":"hypophosphatemic vitamin D resistant rickets","type":"related"},{"name":"hypophosphatemic vitamin D-resistant rickets","type":"related"},{"name":"rickets, vitamin D resistant","type":"related"},{"name":"rickets, vitamin D-resistant","type":"related"},{"name":"vitamin D-resistant rickets","type":"related"}],"termid":"MONDO:0024300","xrefs":{"Monarch":{"xref_id":"0024300"}}}


id: MONDO:0019794
data:
  {"annotated_genes":["SJAG_03692"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03692":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant cerebellar ataxia type IV","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:94149","GARD:19254","UMLS:C5680261","MEDGEN:1842584"],"synonyms":[{"name":"ADCA4","type":"exact"},{"name":"ADCAIV","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type 4","type":"exact"},{"name":"autosomal dominant cerebellar ataxia type IV","type":"exact"}],"termid":"MONDO:0019794","terms_by_termid":{"MONDO:0011330":null},"xrefs":{"Monarch":{"xref_id":"0019794"}}}


id: PBO:0089884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp20 family","termid":"PBO:0089884"}


id: MONDO:0017028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease specific to adulthood associated with a systemic disease (obsolete MONDO:0017028)","secondary_identifiers":["Orphanet:264745"],"synonyms":[{"name":"secondary ILD specific to adulthood associated with a systemic disease","type":"exact"}],"termid":"MONDO:0017028","xrefs":{"Monarch":{"xref_id":"0017028"}}}


id: MONDO:0003928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyosarcoma arising from the uterus corpus. It is characterized by the presence of cellular pleomorphism, malignant cells with large nuclei, and a myxoid stroma.","definition_xrefs":["NCIT:C40175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid leiomyosarcoma","termid":"MONDO:0003359"},{"relation_name":"is_a","term_name":"leiomyosarcoma of the corpus uteri","termid":"MONDO:0016262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus myxoid leiomyosarcoma","secondary_identifiers":["ONCOTREE:UMLMS","UMLS:C1519861","DOID:6567","MEDGEN:311426"],"synonyms":[{"name":"body of uterus myxoid leiomyosarcoma","type":"exact"},{"name":"myxoid leiomyosarcoma of body of uterus","type":"exact"},{"name":"uterine corpus myxoid leiomyosarcoma","type":"exact"},{"name":"uterine myxoid leiomyosarcoma","type":"related"}],"termid":"MONDO:0003928","xrefs":{"Monarch":{"xref_id":"0003928"}}}


id: GO:0009611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to wounding","secondary_identifiers":["GO:0002245"],"synonyms":[{"name":"physiological response to wounding","type":"exact"}],"termid":"GO:0009611"}


id: PBO:0076245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 6","termid":"PBO:0076245"}


id: GO:0009597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a virus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of virus","synonyms":[{"name":"perception of virus","type":"related"}],"termid":"GO:0009597"}


id: GO:0015309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + cycloheximide(in) = H+(in) + cycloheximide(out).","definition_xrefs":["TC:2.A.1.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"cycloheximide transmembrane transporter activity","termid":"GO:0015243"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"cycloheximide:proton antiporter activity","synonyms":[{"name":"cycloheximide:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015309"}


id: MONDO:0016853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome Y is a rare chromosome Y structural anomaly, with a highly variable phenotype, mostly characterized by short stature, partial to total gonadal failure, sexual infantilism, genital anomalies (e.g. ambiguous genitalia, hypospadias, cryptorchidism), and azoospermia or oligozoospermia. Additional reported features include speech delay, obesity, and acanthosis nigricans. Gender dysphoria and comorbid bipolar disorder have also been observed.","definition_xrefs":["Orphanet:261529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome Y","secondary_identifiers":["GARD:20785","MEDGEN:1631964","SCTID:763407008","UMLS:C4706450","icd11.foundation:388539343"],"synonyms":[{"name":"Ring chromosome Y syndrome","type":"related"},{"name":"Ring chromosome type Y","type":"exact"},{"name":"r(Y)","type":"exact"}],"termid":"MONDO:0016853","xrefs":{"Monarch":{"xref_id":"0016853"}}}


id: MONDO:0005627
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the head and neck. Representative examples include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C4013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0006859","UMLS:C0278996","MEDGEN:78920","DOID:11934"],"synonyms":[{"name":"cancer of craniocervical region","type":"exact"},{"name":"cancer of head and neck","type":"exact"},{"name":"cancer of the head and neck","type":"exact"},{"name":"craniocervical region cancer","type":"exact"},{"name":"head and neck cancer","type":"exact"},{"name":"head and neck malignant neoplasia","type":"exact"},{"name":"head and neck neoplasm","type":"broad"},{"name":"head and neck tumors","type":"broad"},{"name":"head and neck tumours","type":"broad"},{"name":"head/neck neoplasm","type":"broad"},{"name":"malignant craniocervical region neoplasm","type":"exact"},{"name":"malignant head and neck neoplasm","type":"exact"},{"name":"malignant head and neck tumor","type":"exact"},{"name":"malignant head and neck tumour","type":"exact"},{"name":"malignant neoplasm of craniocervical region","type":"exact"},{"name":"malignant neoplasm of head and neck","type":"exact"},{"name":"malignant neoplasm of the head and neck","type":"exact"},{"name":"malignant tumor of head and neck","type":"exact"},{"name":"malignant tumor of the head and neck","type":"exact"},{"name":"malignant tumour of head and neck","type":"exact"},{"name":"malignant tumour of the head and neck","type":"exact"},{"name":"tumour of head and neck","type":"broad"}],"termid":"MONDO:0005627","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005627"}}}


id: GO:0043260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha5, beta2 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-11 complex","synonyms":[{"name":"laminin-521 complex","type":"exact"}],"termid":"GO:0043260"}


id: PBO:0114652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase","termid":"PBO:0114652"}


id: PBO:0027652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_choline","termid":"PBO:0027652"}


id: MONDO:0019333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia, familial, 1","termid":"MONDO:0009734"},{"relation_name":"is_a","term_name":"diazoxide-resistant diffuse hyperinsulinism","termid":"MONDO:0015625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive hyperinsulinism due to SUR1 deficiency","secondary_identifiers":["UMLS:C5191077","GARD:16726","Orphanet:79643","MEDGEN:1683144"],"synonyms":[{"name":"autosomal recessive hyperinsulinemic hypoglycemia due to SUR1 deficiency","type":"exact"}],"termid":"MONDO:0019333","xrefs":{"Monarch":{"xref_id":"0019333"}}}


id: MONDO:0015674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetically heterogeneous group of neuronal ceroid lipofuscinoses (NCLs) typically characterized by onset during infancy or early childhood with decline of mental and motor capacities, epilepsy, and vision loss through retinal degeneration.","definition_xrefs":["Orphanet:168491"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile neuronal ceroid lipofuscinosis","termid":"MONDO:0019261"},{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"late infantile neuronal ceroid lipofuscinosis","secondary_identifiers":["NANDO:1200153","NANDO:2201242","UMLS:C0022340","icd11.foundation:1923920542","SCTID:14637005","GARD:17032","MEDGEN:9589"],"synonyms":[{"name":"Bielschowsky-jansky disease","type":"related"},{"name":"Bielschowsky-jansky type neuronal ceroid lipofuscinosis","type":"related"},{"name":"Jansky-Bielschowsky disease","type":"exact"},{"name":"LINCL","type":"exact"},{"name":"amaurotic idiocy early juvenile type","type":"related"},{"name":"amaurotic idiocy late infantile type","type":"related"},{"name":"amaurotic idiocy, early juvenile type","type":"related"},{"name":"amaurotic idiocy, late infantile type","type":"related"},{"name":"dollinger-Bielschowsky syndrome","type":"related"},{"name":"dollinger-Bielschowsky type neuronal ceroid lipofuscinosis","type":"related"},{"name":"late infantile NCL","type":"exact"},{"name":"late-infantile neuronal ceroid lipofuscinosis","type":"exact"}],"termid":"MONDO:0015674","xrefs":{"Monarch":{"xref_id":"0015674"}}}


id: PR:Q09914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.04","synonyms":[{"name":"Spom972h-rho1","type":"exact"}],"termid":"PR:Q09914"}


id: GO:0034849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-naphthoyl-CoA + OH- = 2-naphthoate + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-naphthoate CoA-transferase activity (obsolete GO:0034849)","termid":"GO:0034849"}


id: MONDO:0019246
data:
  {"annotated_genes":["SJAG_02139","SJAG_05182","SJAG_04295","SJAG_05175","SJAG_04706"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87112,87111,87113,87115,87114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[87097,87096,87099,87100,87098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02139":null,"SJAG_04295":null,"SJAG_04706":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of lysosomal amino acid transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681276","MEDGEN:1842266","Orphanet:79207","GARD:18974"],"synonyms":[{"name":"disorder of lysosomal amino acid transport","type":"related"}],"termid":"MONDO:0019246","terms_by_termid":{"MONDO:0010027":null,"MONDO:0011449":null},"xrefs":{"Monarch":{"xref_id":"0019246"}}}


id: PBO:0065741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXN antisense RNA 1","termid":"PBO:0065741"}


id: GO:1902971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA duplex unwinding involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic DNA replication DNA duplex unwinding (obsolete GO:1902971)","synonyms":[{"name":"DNA duplex unwinding involved in mitotic DNA replication","type":"exact"},{"name":"DNA duplex unwinding involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902971"}


id: GO:2000986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of behavioral fear response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"negative regulation of fear response","termid":"GO:1903366"},{"relation_name":"is_a","term_name":"regulation of behavioral fear response","termid":"GO:2000822"},{"relation_name":"negatively_regulates","term_name":"behavioral fear response","termid":"GO:0001662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of behavioral fear response","synonyms":[{"name":"negative regulation of behavioural fear response","type":"exact"}],"termid":"GO:2000986"}


id: PBO:0048275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 11","termid":"PBO:0048275"}


id: MONDO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasms of the endometrial stroma that sometimes involve the myometrium. These tumors contain cells that may closely or remotely resemble the normal stromal cells. Endometrial stromal neoplasms are divided into three categories: (1) benign stromal nodules; (2) low-grade stromal sarcoma, or endolymphatic stromal myosis; and (3) malignant endometrial stromal sarcoma (sarcoma, endometrial stromal).","definition_xrefs":["MESH:D036821"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endometrial cancer","termid":"MONDO:0011962"},{"relation_name":"is_a","term_name":"endometrium neoplasm","termid":"MONDO:0021251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial stromal tumor","secondary_identifiers":["MEDGEN:87280","SCTID:446887007","UMLS:C0334695","EFO:1000920","ICD9:239.5","DOID:5166"],"synonyms":[{"name":"endometrial stroma neoplasm","type":"exact"},{"name":"endometrial stroma tumor","type":"exact"},{"name":"endometrial stroma tumour","type":"exact"},{"name":"endometrial stromal neoplasm","type":"exact"},{"name":"endometrial stromal tumor","type":"exact"},{"name":"endometrial stromal tumor (morphologic abnormality)","type":"exact"},{"name":"endometrial stromal tumour (morphologic abnormality)","type":"exact"},{"name":"neoplasm of endometrial stroma","type":"exact"},{"name":"tumor of endometrial stroma","type":"exact"},{"name":"tumour of endometrial stroma","type":"exact"}],"termid":"MONDO:0003311","xrefs":{"Monarch":{"xref_id":"0003311"}}}


id: PBO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)","termid":"PBO:0000484"}


id: SO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a chloroplast DNA sample.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chloroplast_DNA","termid":"SO:0001033"},{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_DNA_read","synonyms":[{"name":"chloroplast DNA read","type":"exact"}],"termid":"SO:0001930"}


id: GO:0014031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell development","termid":"GO:0014031"}


id: GO:0061856
data:
  {"annotated_genes":["SJAG_04096","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92970],"is_not":false,"summary":null,"term":"GO:0061856"},{"annotations":[110484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a Golgi membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:21811607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi calcium ion transport","termid":"GO:0032472"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03850":null,"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"Golgi calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061856","terms_by_termid":{"GO:0061454":null,"GO:0061856":null}}


id: PBO:0075758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine repetitive matrix 1","termid":"PBO:0075758"}


id: PR:Q9P7L1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.12c gene.","definition_xrefs":["UniProtKB:Q9P7L1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain-containing protein C21C3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.12c","synonyms":[{"name":"Spom972h-SPBC21C3.12c","type":"exact"}],"termid":"PR:Q9P7L1"}


id: PBO:0063764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain containing endocytic trafficking adaptor 1","termid":"PBO:0063764"}


id: PBO:0005903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine, mitochondrial","termid":"PBO:0005903"}


id: GO:0051651
data:
  {"annotated_genes":["SJAG_00368","SJAG_00053","SJAG_01116","SJAG_04221","SJAG_03170","SJAG_01738","SJAG_01017","SJAG_00661","SJAG_03850","SJAG_01001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59708,92179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[68131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[112691,95796,101966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[93905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[110484],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061454"},{"annotations":[108838,117043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which a substance or cellular entity, such as a protein complex or organelle, is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01116":null,"SJAG_01738":null,"SJAG_03170":null,"SJAG_03850":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of location in cell","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"cellular retention","type":"narrow"},{"name":"cellular sequestering","type":"narrow"},{"name":"cellular storage","type":"narrow"},{"name":"intracellular retention","type":"narrow"},{"name":"intracellular sequestering","type":"narrow"},{"name":"intracellular storage","type":"narrow"},{"name":"maintenance of cellular localization","type":"related"},{"name":"maintenance of intracellular localization","type":"narrow"},{"name":"maintenance of localization in cell","type":"related"},{"name":"maintenance of localization within cell","type":"narrow"},{"name":"retention within cell","type":"narrow"},{"name":"sequestering within cell","type":"narrow"},{"name":"storage within cell","type":"narrow"}],"termid":"GO:0051651","terms_by_termid":{"GO:0006621":null,"GO:0032065":null,"GO:0051685":null,"GO:0061454":null,"GO:0097248":null,"GO:1990854":null}}


id: GO:0015936
data:
  {"annotated_genes":["SJAG_01139","SJAG_04288","SJAG_00427","SJAG_02247","SJAG_03715","SJAG_04627","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59572],"is_not":false,"summary":null,"term":"GO:0015936"},{"annotations":[91148,72815,81633,73084,80378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[79720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00427":null,"SJAG_01139":null,"SJAG_02247":null,"SJAG_03715":null,"SJAG_04288":null,"SJAG_04627":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"coenzyme A metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006763"],"synonyms":[{"name":"CoA metabolism","type":"exact"},{"name":"coenzyme A metabolism","type":"exact"}],"termid":"GO:0015936","terms_by_termid":{"GO:0015936":null,"GO:0015937":null,"GO:0015938":null}}


id: GO:0043708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, contributing to the formation of a biofilm.","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"submerged biofilm formation","termid":"GO:0090605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in biofilm formation","synonyms":[{"name":"cell adhesion during biofilm formation","type":"related"}],"termid":"GO:0043708"}


id: FYECO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited leucine","secondary_identifiers":["PMID:7565608"],"termid":"FYECO:0000280"}


id: PBO:0041989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 33","termid":"PBO:0041989"}


id: MONDO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated iridoschisis","secondary_identifiers":["icd11.foundation:1870961422","GARD:22125","MEDGEN:509720","Orphanet:519392","UMLS:C0154919"],"termid":"MONDO:0033810","xrefs":{"Monarch":{"xref_id":"0033810"}}}


id: PBO:0075869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 9","termid":"PBO:0075869"}


id: SO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A long non-coding transcript that contains a protein coding gene within its intronic sequence on the same strand, with no overlap of exonic sequence.","definition_xrefs":["GENECODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA","synonyms":[{"name":"sense overlap lncRNA","type":"exact"},{"name":"sense_overlap_lncRNA","type":"exact"},{"name":"sense_overlapping","type":"exact"}],"termid":"SO:0002132"}


id: FYPO:0007337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 methylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 methylation at centromere","type":"exact"},{"name":"increased histone H3-K4 methylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 methylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 methylation at centromere","type":"exact"},{"name":"increased histone H3K4me at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 methylation at centromere","type":"exact"}],"termid":"FYPO:0007337"}


id: PBO:0086983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of trehalose-6-phosphate synthase/phosphatase; involved in synthesis of storage carbohydrate trehalose; expression is induced by stress conditions and repressed by the Ras-cAMP pathway; TPS3 has a paralog, TSL1, that arose from the whole genome duplication","termid":"PBO:0086983"}


id: MONDO:0010653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked syndrome characterized by intellectual deficiency, microcephaly, leanness and mild short stature.","definition_xrefs":["Orphanet:3242"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","termid":"MONDO:0015246"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renpenning syndrome","secondary_identifiers":["MEDGEN:208670","GARD:9509","NCIT:C165533","ICD9:759.89","MESH:C537761","OMIM:309500","SCTID:699669001","DOID:0060179","UMLS:C0796135","icd11.foundation:1415315699"],"synonyms":[{"name":"Golabi-Ito-Hall syndrome","type":"exact"},{"name":"MRXS3","type":"related"},{"name":"MRXS8","type":"related"},{"name":"RENS1","type":"related"},{"name":"Renpenning syndrome","type":"exact"},{"name":"Renpenning syndrome 1","type":"related"},{"name":"Renpenning syndrome type 1","type":"exact"},{"name":"Sutherland-Haan X-linked intellectual disability syndrome","type":"exact"},{"name":"Sutherland-Haan X-linked mental retardation syndrome","type":"exact"},{"name":"Sutherland-Haan syndrome","type":"related"},{"name":"X-linked intellectual disability Renpenning type","type":"exact"},{"name":"X-linked intellectual disability due to PQBP1 mutations","type":"exact"},{"name":"X-linked intellectual disability syndromic 3","type":"related"},{"name":"X-linked intellectual disability with spastic diplegia","type":"exact"},{"name":"X-linked intellectual disability, Renpenning type","type":"exact"},{"name":"X-linked mental retardation Renpenning type","type":"exact"},{"name":"X-linked mental retardation syndromic 3","type":"related"},{"name":"X-linked mental retardation with spastic diplegia","type":"exact"},{"name":"intellectual disability, X-linked 55","type":"related"},{"name":"intellectual disability, X-linked Renpenning type","type":"related"},{"name":"intellectual disability, X-linked, Renpenning type","type":"related"},{"name":"intellectual disability, X-linked, syndromic 3","type":"related"},{"name":"intellectual disability, X-linked, syndromic 8","type":"related"},{"name":"intellectual disability, X-linked, with spastic diplegia","type":"related"},{"name":"mental retardation, X-linked 55","type":"related"},{"name":"mental retardation, X-linked Renpenning type","type":"related"},{"name":"mental retardation, X-linked, Renpenning type","type":"related"},{"name":"mental retardation, X-linked, syndromic 3","type":"related"},{"name":"mental retardation, X-linked, syndromic 8","type":"related"},{"name":"mental retardation, X-linked, with spastic diplegia","type":"related"},{"name":"renpenning syndrome, X-linked recessive","type":"exact"},{"name":"syndromic X-linked intellectual disability 8","type":"exact"},{"name":"syndromic X-linked mental retardation 8","type":"exact"}],"termid":"MONDO:0010653","xrefs":{"Monarch":{"xref_id":"0010653"}}}


id: PBO:0005132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rix1 (predicted)","termid":"PBO:0005132"}


id: FYPO:0005821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NEDD8-specific protease activity (deneddylase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal NEDD8-specific protease activity","synonyms":[{"name":"abnormal deneddylase activity","type":"exact"}],"termid":"FYPO:0005821"}


id: GO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interferon-gamma (a type II interferon) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling","PMID:15546383","ISBN:0126896631","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"type II interferon receptor activity","synonyms":[{"name":"IFN-gamma receptor activity","type":"exact"},{"name":"IFNG receptor activity","type":"exact"},{"name":"interferon-gamma receptor activity","type":"exact"}],"termid":"GO:0004906"}


id: PBO:0018164
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae SSO1 & SSO2","termid":"PBO:0018164"}


id: PATO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterolateral orientation","synonyms":[{"name":"anterolaterally directed","type":"exact"}],"termid":"PATO:0002492"}


id: PBO:0014620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name deriviation, Calmodulin-dependent Kinase Kinase","termid":"PBO:0014620"}


id: FYPO:0001986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 5-fluorouracil than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to 5-fluorouracil","synonyms":[{"name":"resistance to 5-FU","type":"exact"},{"name":"resistance to 5-fluorouracil during mitotic cell cycle","type":"related"},{"name":"resistance to 5-fluorouracil during vegetative growth","type":"exact"},{"name":"resistant to 5-fluorouracil","type":"exact"}],"termid":"FYPO:0001986"}


id: PBO:0081574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 501","termid":"PBO:0081574"}


id: MONDO:0700182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erythroleukemia that occurs in a cat.","definition_xrefs":["NCIT:C134770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline erythroleukemia","termid":"MONDO:0700182","xrefs":{"Monarch":{"xref_id":"0700182"}}}


id: GO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + indolin-2-one + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"indole-2-monooxygenase activity","secondary_identifiers":["EC:1.14.14.153","KEGG_REACTION:R07403"],"termid":"GO:0036190"}


id: GO:1904978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome organization.","definition_xrefs":["PMID:22511594","GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosome organization","synonyms":[{"name":"regulation of endosome organisation","type":"exact"},{"name":"regulation of endosome organization and biogenesis","type":"related"}],"termid":"GO:1904978"}


id: PR:P0CT38
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-5 gene.","definition_xrefs":["UniProtKB:P0CT38","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-5 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.03c","synonyms":[{"name":"Spom972h-Tf2-5","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT38"}


id: SO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deviation in chromosome structure or number.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"part_of","term_name":"chromosomally_aberrant_genome","termid":"SO:0001524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_variation","synonyms":[{"name":"chromosome variation","type":"exact"}],"termid":"SO:0000240"}


id: MONDO:0014014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 4, localized or generalized intermediate, autosomal recessive","secondary_identifiers":["MEDGEN:767281","OMIM:615028","GARD:17691","Orphanet:412189","UMLS:C3554367"],"synonyms":[{"name":"EBNS","type":"related"},{"name":"EBS-AR exophilin 5","type":"exact"},{"name":"epidermolysis bullosa simplex 4, localized or generalized intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex due to exophilin 5 deficiency","type":"exact"},{"name":"epidermolysis bullosa, nonspecific, autosomal recessive","type":"related"}],"termid":"MONDO:0014014","xrefs":{"Monarch":{"xref_id":"0014014"}}}


id: GO:0009538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.","definition_xrefs":["GOC:kd","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem I","termid":"GO:0009522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem I reaction center","synonyms":[{"name":"photosystem I reaction centre","type":"exact"}],"termid":"GO:0009538"}


id: MONDO:0004708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage 0 includes: For squamous cell carcinoma: Tis (HGD), N0, M0, G1, GX, Tumor location: Any. For adenocarcinoma: Tis (HGD), N0, M0, G1, GX. Tis: High-grade dysplasia. N0: No regional lymph node metastasis. M0: No distant metastasis. G1: Well differentiated. GX: Grade cannot be assessed-stage grouping as G1. Tumor location: Location of the primary cancer site is defined by the position of the upper (proximal) edge of the tumor in the esophagus. (AJCC 7th ed.)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophagus carcinoma in situ","secondary_identifiers":["MEDGEN:56332","UMLS:C0154059","ICD10CM:D00.1","ICD9:230.1","NCIT:C89771","SCTID:92585006","DOID:9095"],"synonyms":[{"name":"carcinoma in situ of esophagus","type":"exact"},{"name":"carcinoma in situ of oesophagus","type":"exact"},{"name":"esophageal carcinoma in situ","type":"exact"},{"name":"esophageal carcinoma in situ aJCC v7","type":"exact"},{"name":"esophagus in situ carcinoma","type":"exact"},{"name":"oesophagus in situ carcinoma","type":"exact"},{"name":"severe esophageal dysplasia","type":"exact"},{"name":"severe esophageal dysplasia aJCC v7","type":"exact"},{"name":"stage 0 carcinoma of the esophagus","type":"exact"},{"name":"stage 0 carcinoma of the oesophagus","type":"exact"},{"name":"stage 0 esophageal cancer","type":"exact"},{"name":"stage 0 esophageal cancer aJCC v7","type":"exact"},{"name":"stage 0 esophageal carcinoma in situ","type":"exact"},{"name":"stage 0 esophagus carcinoma","type":"exact"},{"name":"stage 0 oesophagus carcinoma","type":"exact"}],"termid":"MONDO:0004708","xrefs":{"Monarch":{"xref_id":"0004708"}}}


id: PBO:0088962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein, BUD22 family","termid":"PBO:0088962"}


id: GO:0140337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to diacylglyceride and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"diacylglyceride transfer activity","synonyms":[{"name":"diacylglyceride carrier activity","type":"exact"}],"termid":"GO:0140337"}


id: GO:0010290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of chlorophyll catabolites such as non-fluorescent chlorophyll catabolites (NCCs), from one side of a membrane to the other.","definition_xrefs":["PMID:9681016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"chlorophyll catabolite transmembrane transporter activity","termid":"GO:0010290"}


id: PBO:0044282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 5","termid":"PBO:0044282"}


id: GO:0071285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lithium (Li+) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lithium ion","termid":"GO:0010226"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lithium ion","termid":"GO:0071285"}


id: MONDO:0013439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital bile acid synthesis defect type 3 (BAS defect type 3) is a severe anomaly of bile acid synthesis characterized by severe neonatal cholestatic liver disease.","definition_xrefs":["Orphanet:79302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"},{"relation_name":"is_a","term_name":"CYP7B1-related disorder of oxysterol accumulation","termid":"MONDO:1060107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 3","secondary_identifiers":["SCTID:719454003","GARD:16713","DOID:0111070","MEDGEN:462497","MESH:C566340","OMIM:613812","UMLS:C3151147"],"synonyms":[{"name":"BASD3","type":"exact"},{"name":"CBAS3","type":"exact"},{"name":"CYP7B1 congenital bile acid synthesis defect","type":"exact"},{"name":"bile acid synthesis defect, congenital, 3","type":"related"},{"name":"bile acid synthesis defect, congenital, type 3","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in CYP7B1","type":"exact"},{"name":"congenital bile acid synthesis defect type 3","type":"exact"},{"name":"oxysterol 7-alpha-hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0013439","xrefs":{"Monarch":{"xref_id":"0013439"}}}


id: PBO:0029746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_calcium_export","termid":"PBO:0029746"}


id: PBO:0017803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic septin Spn1","termid":"PBO:0017803"}


id: GO:0071729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the beak are generated and organized. The avian beak is an external anatomical structure, in the head region, that is adapted for feeding self and young, catching prey, probing, etc. It encompasses, but is not restricted to, the maxilla, mandible, maxillary rhamphotheca, mandibular rhamphotheca, nostril, nasal fossa, nasal bones, egg tooth and rictus.","definition_xrefs":["GOC:lp","ISBN:0702008729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"beak development","termid":"GO:0071728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beak morphogenesis","termid":"GO:0071729"}


id: GO:0019894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with kinesin, a member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation.","definition_xrefs":["GOC:curators","PMID:8606779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"kinesin binding","termid":"GO:0019894"}


id: GO:0047142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized glutathione + [xanthine dehydrogenase] = reduced glutathione + xanthine-oxidase.","definition_xrefs":["MetaCyc:1.8.4.7-RXN","EC:1.8.4.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"enzyme-thiol transhydrogenase (glutathione-disulfide) activity","synonyms":[{"name":"[xanthine-dehydrogenase]:oxidized-glutathione S-oxidoreductase activity","type":"related"},{"name":"enzyme-thiol transhydrogenase (glutathione-disulphide) activity","type":"exact"},{"name":"enzyme-thiol transhydrogenase (oxidized-glutathione) activity","type":"exact"},{"name":"glutathione-dependent thiol:disulfide oxidoreductase activity","type":"related"},{"name":"thiol:disulfide oxidoreductase activity","type":"related"},{"name":"thiol:disulphide oxidoreductase activity","type":"related"},{"name":"xanthine-dehydrogenase:glutathione-disulfide S-oxidoreductase activity","type":"related"},{"name":"xanthine-dehydrogenase:oxidized-glutathione S-oxidoreductase activity","type":"related"}],"termid":"GO:0047142"}


id: FYPO:0006532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is normal (i.e. indistinguishable from wild type) during prophase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"normal protein localization to centromere during meiotic prophase II","synonyms":[{"name":"normal protein localisation to centromere during meiotic prophase II","type":"exact"},{"name":"normal protein localisation to centromere during prophase II","type":"exact"},{"name":"normal protein localization to chromosome, centric region during meiotic prophase II","type":"exact"},{"name":"normal protein localization to chromosome, centromeric region during prophase II","type":"exact"}],"termid":"FYPO:0006532"}


id: GO:0071811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of fever generation via positive regulation of the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of prostaglandin biosynthetic process","termid":"GO:0031394"},{"relation_name":"is_a","term_name":"positive regulation of fever generation","termid":"GO:0031622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"positive regulation of fever generation by positive regulation of prostaglandin biosynthesis","termid":"GO:0071811"}


id: PBO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNMT1-associated colon cancer repressed lncRNA 1","termid":"PBO:0044526"}


id: PBO:0074228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 2","termid":"PBO:0074228"}


id: PBO:0055563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2999","termid":"PBO:0055563"}


id: PBO:0039587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 5","termid":"PBO:0039587"}


id: MONDO:0009822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"otoonychoperoneal syndrome","secondary_identifiers":["Orphanet:2793","SCTID:441944007","ICD9:759.89","UMLS:C1850105","GARD:4170","MESH:C564912","OMIM:259780","MEDGEN:376704"],"synonyms":[{"name":"oto-onycho-peroneal syndrome","type":"related"},{"name":"otoonychoperoneal syndrome","type":"exact"}],"termid":"MONDO:0009822","xrefs":{"Monarch":{"xref_id":"0009822"}}}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: GO:0010718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"}


id: FYPO:0000165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of conjugation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of mating","synonyms":[{"name":"abnormal regulation of conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0000165"}


id: GO:0075307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of conidium formation, a process of producing non-motile spores, called conidia, via mitotic asexual reproduction in higher fungi. Conidia are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.","definition_xrefs":["GOC:pamgo_curators","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of sporulation","termid":"GO:0043938"},{"relation_name":"is_a","term_name":"regulation of conidium formation","termid":"GO:0075306"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"conidium formation","termid":"GO:0048315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidium formation","termid":"GO:0075307"}


id: PATO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001050 relative susceptibility (obsolete PATO:0001050)","termid":"PATO:0001050"}


id: GO:1990623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dilated terminal portions of neurosecretory axons constituting the hypothalamohypophyseal tract, found in close proximity to sinusoidal capillaries in the posterior pituitary. Herring bodies consist of aggregates of membrane-bound neurosecretory vesicles where oxytocin or antidiuretic hormone (ADH) are stored prior to release. Each Herring body also contains ATP and either neurophysin I or neurophysin II which bind to oxytocin and ADH, respectively.","definition_xrefs":["ISBN:0199652473","Wikipedia:Herring_bodies"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Herring body","synonyms":[{"name":"neurosecretory body","type":"exact"}],"termid":"GO:1990623"}


id: MOD:02008
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a palmitoleylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"palmitoleylated residue","termid":"MOD:01423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-palmitoleylated residue","termid":"MOD:02008"}


id: GO:0016625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.2.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016625"}


id: PATO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches joined together in a series of prominent arches.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brochidodromous","termid":"PATO:0001970"}


id: PBO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UREG (predicted)","termid":"PBO:0005343"}


id: PBO:0062672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 3 pseudogene","termid":"PBO:0062672"}


id: PBO:0084122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hEST1A/B (SMG5/6)-like protein; contributes to environment-sensing adaptive gene expression responses; Esl1p and Esl2p contain a 14-3-3-like domain and a putative PilT N-terminus ribonuclease domain; ESL1 has a paralog, ESL2, that arose from the whole genome duplication","termid":"PBO:0084122"}


id: PBO:0074299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted LY6/PLAUR domain containing 2","termid":"PBO:0074299"}


id: PR:O74953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uri1 gene.","definition_xrefs":["UniProtKB:O74953","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C736.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.07c","synonyms":[{"name":"Spom972h-uri1","type":"exact"}],"termid":"PR:O74953"}


id: MONDO:0017617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acquired immunodeficiency that occurs in an adult.","definition_xrefs":["MONDO:patterns/adult"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired immunodeficiency","termid":"MONDO:0017769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acquired adult-onset immunodeficiency","secondary_identifiers":["UMLS:C5191336","MEDGEN:1684214","GARD:11992","Orphanet:306431"],"synonyms":[{"name":"acquired immunodeficiency of adults","type":"exact"},{"name":"adult acquired immunodeficiency","type":"exact"},{"name":"adult onset immunodeficiency syndrome","type":"related"},{"name":"adult-onset immunodeficiency due to anti-interferon-gamma autoantibody","type":"related"},{"name":"adult-onset immunodeficiency with acquired Anti-interferon-gamma autoantibodies","type":"related"},{"name":"adult-onset immunodeficiency with anti-interferon-gamma autoantibodies","type":"exact"},{"name":"anti-IFN-gamma autoantibody syndrome","type":"related"}],"termid":"MONDO:0017617","xrefs":{"Monarch":{"xref_id":"0017617"}}}


id: GO:0052921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetone cyanohydrin = hydrogen cyanide + acetone.","definition_xrefs":["MetaCyc:ACETONE-CYANHYDRIN-LYASE-RXN","KEGG_REACTION:R01553"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone-cyanohydrin acetone-lyase (cyanide-forming) activity (obsolete GO:0052921)","termid":"GO:0052921"}


id: GO:0102031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-4-acetamido-4,6-dideoxy-alpha-D-galactose + beta-D-ManNAcA-(1->4)-alpha-D-GlcNAc-1-diphospho-ditrans,polycis-undecaprenol = H+ + alpha-D-FucNAc4-(1->4)-beta-D-ManNAcA-(1->4)-D-GlcNAc-undecaprenyl diphosphate + dTDP.","definition_xrefs":["EC:2.4.1.325","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"4-acetamido-4,6-dideoxy-D-galactose transferase activity","secondary_identifiers":["RHEA:28759","MetaCyc:FUC4NACTRANS-RXN"],"termid":"GO:0102031"}


id: GO:2000621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA replication termination.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"regulates","term_name":"DNA replication termination","termid":"GO:0006274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA replication termination","termid":"GO:2000621"}


id: GO:0045500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to sevenless (sev; a receptor tyrosine kinase) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:10771085","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sevenless signaling pathway","synonyms":[{"name":"sev receptor signaling pathway","type":"exact"},{"name":"sev signaling pathway","type":"exact"},{"name":"sevenless signalling pathway","type":"exact"}],"termid":"GO:0045500"}


id: FYPO:0003723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}


id: PBO:0081998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 31","termid":"PBO:0081998"}


id: GO:1902496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any protein binding that is involved in negative regulation of telomere maintenance via telomerase.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:24013504","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete protein binding involved in negative regulation of telomere maintenance via telomerase (obsolete GO:1902496)","synonyms":[{"name":"protein binding involved in down regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in down-regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in downregulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"protein binding involved in inhibition of telomere maintenance via telomerase","type":"narrow"}],"termid":"GO:1902496"}


id: MONDO:1010603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, domestic cat","secondary_identifiers":["OMIA:000536-9685"],"termid":"MONDO:1010603","xrefs":{"Monarch":{"xref_id":"1010603"}}}


id: GO:0047105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 4-trimethylammoniobutanal = NADH + 4-trimethylammoniobutanoate.","definition_xrefs":["MetaCyc:1.2.1.47-RXN","EC:1.2.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-trimethylammoniobutyraldehyde dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-71260","RHEA:17985"],"synonyms":[{"name":"4-N-trimethylaminobutyraldehyde dehydrogenase activity","type":"related"},{"name":"4-trimethylaminobutyraldehyde dehydrogenase activity","type":"related"},{"name":"4-trimethylammoniobutanal:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047105"}


id: GO:1902970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA duplex unwinding involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete premeiotic DNA replication DNA duplex unwinding (obsolete GO:1902970)","synonyms":[{"name":"DNA duplex unwinding involved in meiotic DNA replication","type":"exact"},{"name":"DNA duplex unwinding involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902970"}


id: GO:0061972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bone which forms superficially in the organism are generated and organized.","definition_xrefs":["PMID:12588850","PMID:15003632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bone morphogenesis","termid":"GO:0061973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermal bone morphogenesis","termid":"GO:0061972"}


id: GO:1905619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:15364955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-(1->3)-fucosyltransferase activity","synonyms":[{"name":"regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"regulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905619"}


id: GO:1900704
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siderophore biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of siderophore biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of siderochrome biosynthesis","type":"narrow"},{"name":"regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"regulation of siderophore anabolism","type":"exact"},{"name":"regulation of siderophore biosynthesis","type":"exact"},{"name":"regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"regulation of siderophore formation","type":"exact"},{"name":"regulation of siderophore synthesis","type":"exact"}],"termid":"GO:1900704","terms_by_termid":{"GO:1905569":null}}


id: PBO:0012290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 1 Pre3 (predicted)","termid":"PBO:0012290"}


id: PBO:0066716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 13","termid":"PBO:0066716"}


id: GO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of octopamine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"octopamine secretion","termid":"GO:0061539"}


id: GO:0140913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell, caused by a virus hydrolyzing the peptidoglycan cell wall of the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["PMID:24585055","PMID:29495305","PMID:26085488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell by cytolysis","termid":"GO:0044659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release via disruption of host peptidoglycan cell wall","termid":"GO:0140913"}


id: PBO:0042062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 125","termid":"PBO:0042062"}


id: GO:0005573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete telomerase RNA (obsolete GO:0005573)","synonyms":[{"name":"telomerase RNA","type":"exact"}],"termid":"GO:0005573"}


id: MONDO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group, p1pk system (obsolete MONDO:0044222)","secondary_identifiers":["OMIM:111400"],"synonyms":[{"name":"Nor Polyagglutination syndrome","type":"related"},{"name":"P phenotype","type":"related"},{"name":"P(1) phenotype","type":"related"},{"name":"P(2) phenotype","type":"related"},{"name":"P1(K) phenotype","type":"related"},{"name":"P2(K) phenotype","type":"related"},{"name":"blood group, P1PK system","type":"related"},{"name":"blood group, P1PK system, P(k) phenotype","type":"exact"},{"name":"blood group, P1Pk system, P(2) phenotype","type":"exact"},{"name":"blood group, P1Pk system, p phenotype","type":"exact"}],"termid":"MONDO:0044222","xrefs":{"Monarch":{"xref_id":"0044222"}}}


id: GO:0004160
data:
  {"annotated_genes":["SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72884],"is_not":false,"summary":null,"term":"GO:0004160"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2,3-dihydroxy-3-methylbutanoate = 3-methyl-2-oxobutanoate + H2O.","definition_xrefs":["RHEA:24809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"dihydroxy-acid dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DIHYDROXYISOVALDEHYDRAT-RXN","EC:4.2.1.9"],"synonyms":[{"name":"2,3-dihydroxy-acid hydro-lyase (3-methyl-2-oxobutanoate-forming)","type":"related"},{"name":"2,3-dihydroxy-acid hydro-lyase activity","type":"related"},{"name":"2,3-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"DHAD","type":"related"},{"name":"acetohydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"dihydroxy acid dehydrase activity","type":"related"}],"termid":"GO:0004160","terms_by_termid":{"GO:0004160":null}}


id: FYPO:0000742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0007578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to actin cortical patch","synonyms":[{"name":"abnormal protein localisation to actin cortical patch","type":"exact"},{"name":"abnormal protein localization to F-actin patch","type":"exact"},{"name":"abnormal protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"abnormal protein localization to actin patch","type":"exact"}],"termid":"FYPO:0000742"}


id: GO:1903354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of distal tip cell migration.","definition_xrefs":["PMID:24968003","GOC:mm2","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"distal tip cell migration","termid":"GO:0097628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of distal tip cell migration","termid":"GO:1903354"}


id: GO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075084)","synonyms":[{"name":"modulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075084"}


id: PBO:0041204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BVES antisense RNA 1","termid":"PBO:0041204"}


id: PBO:0070762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 18","termid":"PBO:0070762"}


id: PBO:0070988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 12","termid":"PBO:0070988"}


id: PBO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-compact myelin associated protein","termid":"PBO:0060636"}


id: GO:0098511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect low environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of low humidity","termid":"GO:0098511"}


id: GO:0032045
data:
  {"annotated_genes":["SJAG_06588","SJAG_03928","SJAG_01659","SJAG_01367","SJAG_01032","SJAG_02307","SJAG_00688","SJAG_03678","SJAG_00143","SJAG_01576","SJAG_02471","SJAG_03089"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79139,78877,75603,73597,74173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005851"},{"annotations":[92770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035658"},{"annotations":[106936,95826,109661,94667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071986"},{"annotations":[77477,78954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that stimulates the exchange of guanyl nucleotides associated with a GTPase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00688":null,"SJAG_01032":null,"SJAG_01367":null,"SJAG_01576":null,"SJAG_01659":null,"SJAG_02307":null,"SJAG_02471":null,"SJAG_03089":null,"SJAG_03678":null,"SJAG_03928":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"guanine nucleotide exchange factor","type":"related"}],"termid":"GO:0032045","terms_by_termid":{"GO:0005851":null,"GO:0034066":null,"GO:0035658":null,"GO:0071986":null}}


id: FYPO:0007389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement in mitotic interphase takes place at an abnormal angle relative to the long axis of the cell. Normally, the SPB oscillation angle remains nearly parallel to the long axis.","definition_xrefs":["PomBase:mah","PMID:18495844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal angle of spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abnormal angle of SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abnormal angle of spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal angle of spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"increased angle of spindle pole body-led chromosome movement during mitotic interphase","type":"narrow"},{"name":"increased trajectory angle of SPB oscillation","type":"related"},{"name":"spindle pole body-led chromosome movement during mitotic interphase at abnormal angle","type":"exact"}],"termid":"FYPO:0007389"}


id: MONDO:0004361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma of the spinal cord occurring in adults.","definition_xrefs":["NCIT:C27399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord ependymoma","termid":"MONDO:0003473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult spinal cord ependymoma","secondary_identifiers":["UMLS:C1332215","MEDGEN:231359","DOID:7788"],"synonyms":[{"name":"adult spinal cord ependymoma","type":"exact"},{"name":"spinal cord ependymoma","type":"broad"},{"name":"spinal cord ependymoma of adults","type":"exact"}],"termid":"MONDO:0004361","xrefs":{"Monarch":{"xref_id":"0004361"}}}


id: MOD:00237
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-beta-methylthioaspartic acid.","definition_xrefs":["DeltaMass:61","OMSSA:26","ChEBI:73599","Unimod:39#D","OMSSA:13","PubMed:8844851","PubMed:15473684","RESID:AA0232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-beta-methylthioaspartic acid","synonyms":[{"name":"(2R,3Xi)-2-amino-3-(methylsulfanyl)butanedioic acid","type":"exact"},{"name":"3-(methylthio)-L-aspartic acid","type":"exact"},{"name":"3-carboxy-S-methyl-cysteine","type":"exact"},{"name":"3-methylthio-aspartic acid","type":"exact"},{"name":"3MeSAsp","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"MOD_RES 3-methylthioaspartic acid","type":"exact"},{"name":"Methylthio","type":"related"},{"name":"beta-Methylthio-aspartic acid","type":"exact"},{"name":"beta-methylthio-aspartic acid","type":"exact"},{"name":"bmethylthiold","type":"exact"},{"name":"methythiold","type":"exact"}],"termid":"MOD:00237"}


id: PBO:0038688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin beta","termid":"PBO:0038688"}


id: PBO:0061047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL2 antisense RNA 1","termid":"PBO:0061047"}


id: MONDO:0013123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial heart septal defect in which the cause of the disease is a mutation in the TLL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 6","secondary_identifiers":["DOID:0110111","MEDGEN:414348","MESH:C567764","UMLS:C2751315","OMIM:613087"],"synonyms":[{"name":"ASD6","type":"exact"},{"name":"TLL1 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in TLL1","type":"exact"},{"name":"atrial heart septal defect type 6","type":"exact"},{"name":"atrial septal defect 6","type":"exact"},{"name":"atrial septal defect type 6","type":"exact"}],"termid":"MONDO:0013123","xrefs":{"Monarch":{"xref_id":"0013123"}}}


id: PBO:0013796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1 (predicted)","termid":"PBO:0013796"}


id: GO:0008716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 D-alanine + ATP = D-alanyl-D-alanine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.4","RHEA:11224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"D-alanine-D-alanine ligase activity","secondary_identifiers":["KEGG_REACTION:R01150","MetaCyc:DALADALALIG-RXN"],"synonyms":[{"name":"D-Ala-D-Ala synthetase activity","type":"related"},{"name":"D-alanine:D-alanine ligase (ADP-forming)","type":"related"},{"name":"D-alanyl-D-alanine synthetase activity","type":"related"},{"name":"D-alanylalanine synthetase activity","type":"related"},{"name":"alanine:alanine ligase (ADP-forming) activity","type":"related"},{"name":"alanylalanine synthetase activity","type":"related"}],"termid":"GO:0008716"}


id: MONDO:0005249
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"}]},"cv_name":"mondo","definition":"An acute, acute and chronic, or chronic inflammation focally or diffusely affecting the lung parenchyma, caused by an infection in one or both of the lungs (by bacteria, viruses, fungi, or mycoplasma.). Symptoms include cough, shortness of breath, fevers, chills, chest pain, headache, sweating, and weakness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"pneumonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3333","EFO:0003106","DOID:552","ICD10CM:J18.9","MEDGEN:10813","ICD9:486","ICD10CM:J15","SCTID:233604007","icd11.foundation:142052508","ICD9:483","ICD9:483.8","UMLS:C0032285","ICD9:484.8","MESH:D011014"],"synonyms":[{"name":"acute pneumonia","type":"narrow"}],"termid":"MONDO:0005249","terms_by_termid":{"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0005249"}}}


id: PBO:0068877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 117, pseudogene","termid":"PBO:0068877"}


id: RO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"partner_in","termid":"RO:0002461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target_participant_in","termid":"RO:0002463"}


id: GO:0044376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of the DNA-directed RNA polymerase II core complex from the cytoplasm into the nucleus.","definition_xrefs":["GOC:dos","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II complex import to nucleus (obsolete GO:0044376)","synonyms":[{"name":"DNA-directed RNA polymerase II core complex import into nucleus","type":"exact"},{"name":"DNA-directed RNA polymerase II core complex localization to nucleus","type":"exact"},{"name":"RNA polymerase II complex import into nucleus","type":"exact"},{"name":"RNA polymerase II complex localisation to nucleus","type":"exact"}],"termid":"GO:0044376"}


id: PBO:0026818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_nuclear_protein_localization","termid":"PBO:0026818"}


id: MONDO:0006631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis of the foot generally affects the joint at the base of your big toe. It can cause your toe to: - become stiff over time, which can make it difficult and painful to walk – this is called hallux rigidus - become bent, which can lead to painful bunions (bony lumps at the base of your big toe) – this is called hallux valgus. Osteoarthritis of the mid-foot is also quite common, especially in older people, and may cause an obvious bony swelling (osteophyte) on the top of your mid-foot. Ankle osteoarthritis is least common and may cause your heel to move to an unusual angle.","definition_xrefs":["EFO:1000788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, toe","secondary_identifiers":["MEDGEN:592722","UMLS:C0409929"],"termid":"MONDO:0006631","xrefs":{"Monarch":{"xref_id":"0006631"}}}


id: PBO:0076488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 3","termid":"PBO:0076488"}


id: GO:1902013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(glycerol phosphate) teichoic acid.","definition_xrefs":["PMID:11882717","UniPathway:UPA00827","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(glycerol phosphate) teichoic acid metabolic process","synonyms":[{"name":"poly(glycerol phosphate) teichoic acid metabolism","type":"exact"}],"termid":"GO:1902013"}


id: PBO:0049152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1A","termid":"PBO:0049152"}


id: MONDO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked myotubular myopathy","termid":"MONDO:0010683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"symptomatic form of X-linked centronuclear myopathy in female carriers","secondary_identifiers":["MEDGEN:1842761","UMLS:C5680221","GARD:22439","Orphanet:604680"],"synonyms":[{"name":"Symptomatic form of X-linked myotubular myopathy in female carriers","type":"exact"},{"name":"Symptomatic form of XLCNM in female carriers","type":"exact"},{"name":"Symptomatic form of XLMTM in female carriers","type":"exact"}],"termid":"MONDO:0035826","xrefs":{"Monarch":{"xref_id":"0035826"}}}


id: MONDO:1010723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucocorticoid resistance that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucocorticoid resistance, non-human animal","termid":"MONDO:1010113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid resistance, dog","secondary_identifiers":["OMIA:002254-9615"],"termid":"MONDO:1010723","xrefs":{"Monarch":{"xref_id":"1010723"}}}


id: MONDO:0024257
data:
  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id: PBO:0089288
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, R3H domain-containing","termid":"PBO:0089288"}


id: MOD:00737
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylneuraminic acid (sialic acid) group through a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylneuraminylated","synonyms":[{"name":"N-acetylneuraminic acid (Sialic acid, NeuAc, NANA, SA)","type":"exact"},{"name":"NeuNAc","type":"exact"}],"termid":"MOD:00737"}


id: PBO:0084153
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity plasma membrane H+-biotin (vitamin H) symporter; mutation results in fatty acid auxotrophy; 12 transmembrane domain containing major facilitator subfamily member; mRNA levels negatively regulated by iron deprivation and biotin","termid":"PBO:0084153"}


id: PBO:0077728
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18","termid":"PBO:0077728"}


id: PBO:0039404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 5","termid":"PBO:0039404"}


id: PATO:0000467
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's existence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amount","termid":"PATO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present","synonyms":[{"name":"present in organism","type":"related"}],"termid":"PATO:0000467"}


id: MONDO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign form of insulitis which is an inflammation of the islets of Langerhans of the pancreas. The pancreas and in some cases the Pancreatic β-cells become infiltrated by polymorphonuclear leukocytes and infiltrated by mononuclear cells, leading to inflammation.","definition_xrefs":["EFO:0002502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"benign insulitis","secondary_identifiers":["Wikipedia:Insulitis","PMID:20545565"],"termid":"MONDO:0005176","xrefs":{"Monarch":{"xref_id":"0005176"}}}


id: GO:0035078
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by the steroid hormone 20-hydroxyecdysone (ecdysone) that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death by hormones","termid":"GO:0035081"},{"relation_name":"part_of","term_name":"response to ecdysone","termid":"GO:0035075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by ecdysone","termid":"GO:0035078"}


id: PBO:0064463
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 1, catalytic subunit","termid":"PBO:0064463"}


id: PBO:0109645
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 3 (pseudogene)","termid":"PBO:0109645"}


id: PBO:0081834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 768","termid":"PBO:0081834"}


id: PBO:0075894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression of tumorigenicity 7","termid":"PBO:0075894"}


id: GO:0031126
data:
  {"annotated_genes":["SJAG_01521","SJAG_03179","SJAG_04153","SJAG_01191","SJAG_04942","SJAG_02350","SJAG_04754","SJAG_00943","SJAG_04321","SJAG_03745","SJAG_00854"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61572],"is_not":false,"summary":null,"term":"GO:0031126"},{"annotations":[112022,74965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[81987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"},{"annotations":[74891,79375,117289,72304,76761,77931,76009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071051"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a snoRNA family molecule, also referred to as an sRNA in Archaea.","definition_xrefs":["GOC:krc","PMID:17284456","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_00943":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_02350":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04754":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"sno(s)RNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"sRNA 3'-end processing","type":"narrow"},{"name":"sno(s)RNA 3' end processing","type":"exact"},{"name":"snoRNA 3'-end processing","type":"narrow"}],"termid":"GO:0031126","terms_by_termid":{"GO:0000494":null,"GO:0000495":null,"GO:0031126":null,"GO:0071051":null}}


id: PBO:0088484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase, RRM-containing Rct1","termid":"PBO:0088484"}


id: PBO:0083556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene HUL4/YJR036C; deletion mutant has decreased spore survival in Drosophila feces","termid":"PBO:0083556"}


id: FYPO:0006006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has two nuclei but no septum, and the mitotic cell cycle is arrested in telophase. The post-anaphase microtubule array is present.","definition_xrefs":["PMID:12791993","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell cycle arrest in mitotic telophase","termid":"FYPO:0000622"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic telophase","termid":"FYPO:0000622"},{"relation_name":"is_a","term_name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation","termid":"FYPO:0005689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0000004"],"is_obsolete":false,"name":"inviable binucleate aseptate cell with cell cycle arrest in mitotic telophase","synonyms":[{"name":"inviable binucleate aseptate cell with arrest in telophase of mitotic cell cycle","type":"related"},{"name":"inviable binucleate aseptate cell with cell cycle arrest in mitotic telophase during vegetative growth","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest in telophase","type":"exact"},{"name":"lethal; binucleate aseptate cell with cell cycle arrest in mitotic telophase","type":"exact"},{"name":"mitotic cell cycle arrest in telophase with inviable binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0006006"}


id: PBO:0086554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL149W is not an essential gene","termid":"PBO:0086554"}


id: GO:0005611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-6 complex","synonyms":[{"name":"laminin-311 complex","type":"exact"},{"name":"laminin-6A complex","type":"exact"}],"termid":"GO:0005611"}


id: PBO:0109138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3108","termid":"PBO:0109138"}


id: PBO:0072142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 19","termid":"PBO:0072142"}


id: GO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and urokinase-type plasminogen activator (PLAU); formation of the complex inhibits the serine protease activity of urokinase-type plasminogen activator.","definition_xrefs":["PMID:8536714","GOC:ans","PMID:10340997","PMID:3501295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-PLAU complex","synonyms":[{"name":"PCI-PLAU complex","type":"exact"},{"name":"SERPINA5-PLAU complex","type":"exact"},{"name":"plasma serine protease inhibitor-PLAU complex","type":"exact"},{"name":"protein C inhibitor-U-plasminogen activator complex","type":"exact"},{"name":"protein C inhibitor-uPA complex","type":"exact"},{"name":"protein C inhibitor-urokinase-type plasminogen activator complex","type":"exact"},{"name":"serpin A5-PLAU complex","type":"exact"}],"termid":"GO:0036027"}


id: MONDO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chorioretinitis","termid":"MONDO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"focal chorioretinitis","secondary_identifiers":["MEDGEN:509691","ICD10CM:H30.0","ICD9:363.0","ICD9:363.00","SCTID:15847003","UMLS:C0154870","DOID:1979"],"termid":"MONDO:0002164","xrefs":{"Monarch":{"xref_id":"0002164"}}}


id: PBO:0029645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_at_high_temperature_(obsolete_FYPO:0002075)","termid":"PBO:0029645"}


id: PBO:0044389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily B member 6","termid":"PBO:0044389"}


id: PBO:0043654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 9","termid":"PBO:0043654"}


id: MONDO:0100281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waldenstrom macroglobulinemia","termid":"MONDO:0100280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"macroglobulinemia, Waldenstrom, 1","secondary_identifiers":["OMIM:153600","MEDGEN:320546","UMLS:C1835192"],"synonyms":[{"name":"WM1","type":"exact"},{"name":"macroglobulinemia, Waldenstrom, somatic","type":"exact"},{"name":"macroglobulinemia, waldenstrom, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0100281","xrefs":{"Monarch":{"xref_id":"0100281"}}}


id: MONDO:0007887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked diffuse leiomyomatosis-Alport syndrome","termid":"MONDO:0010641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"leiomyoma of vulva and esophagus","secondary_identifiers":["GARD:10097","MEDGEN:320616","OMIM:150700","UMLS:C1835488","MESH:C537006"],"synonyms":[{"name":"esophagogastric and vulvar leiomyomatosis","type":"related"},{"name":"leiomyoma of vulva and esophagus","type":"exact"},{"name":"leiomyomatosis, esophagogastric and vulvar","type":"related"}],"termid":"MONDO:0007887","xrefs":{"Monarch":{"xref_id":"0007887"}}}


id: PBO:0068888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 129, pseudogene","termid":"PBO:0068888"}


id: PATO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being situated at right angles to the horizon.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertical","termid":"PATO:0001854"}


id: GO:0046966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear thyroid hormone receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nuclear thyroid hormone receptor binding","synonyms":[{"name":"ligand-dependent thyroid hormone receptor interactor activity","type":"narrow"},{"name":"thyroid hormone receptor binding","type":"broad"}],"termid":"GO:0046966"}


id: PBO:0083104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; structurally and functionally related to Pif1p","termid":"PBO:0083104"}


id: GO:0090651
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the cytoplasm located at the apical side of the cell. Used in reference to animal polarized epithelial cells.","definition_xrefs":["PMID:17494872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"apical cytoplasm","termid":"GO:0090651"}


id: PBO:0061942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily Q member 1B pseudogene","termid":"PBO:0061942"}


id: GO:1990887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine = ubiquinol-n + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:10419476"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol O-methyltransferase activity (obsolete GO:1990887)","termid":"GO:1990887"}


id: MONDO:0015925
data:
  {"annotated_genes":["SJAG_03125","SJAG_02206","SJAG_03626","SJAG_00566","SJAG_02194","SJAG_00570","SJAG_05979","SJAG_02805","SJAG_03855","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"},{"annotations":[86785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[87943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[88307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[88306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[88072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[87903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[87026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[88892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[88814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100215"},{"annotations":[87599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100220"}]},"cv_name":"mondo","definition":"A diverse group of lung diseases that affect the lung parenchyma. They are characterized by an initial inflammation of pulmonary alveoli that extends to the interstitium and beyond leading to diffuse pulmonary fibrosis. Interstitial lung diseases are classified by their etiology (known or unknown causes), and radiological-pathological features.","definition_xrefs":["MESH:D017563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_00570":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02206":null,"SJAG_02805":null,"SJAG_03125":null,"SJAG_03626":null,"SJAG_03855":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"interstitial lung disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:233703007","ICD10CM:J80-J84","MEDGEN:1788738","EFO:0004244","DOID:3082","Orphanet:182095","UMLS:C5441745","MedDRA:10022611","NCIT:C164315"],"synonyms":[{"name":"ILD","type":"exact"},{"name":"interstitial lung disease","type":"exact"}],"termid":"MONDO:0015925","terms_by_termid":{"MONDO:0010926":null,"MONDO:0011871":null,"MONDO:0013878":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0100215":null,"MONDO:0100220":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0015925"}}}


id: RO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the relationship holds based on the presence or absence of statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_dependence_to","termid":"RO:0002609"}


id: GO:0036250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a peroxisome along a microtubule, mediated by motor proteins.","definition_xrefs":["PMID:21525035","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"peroxisome transport along microtubule","termid":"GO:0036250"}


id: PBO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2 (predicted)","termid":"PBO:0000825"}


id: PBO:0003749
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.50","termid":"PBO:0003749"}


id: GO:0035174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a serine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine kinase activity (obsolete GO:0035174)","synonyms":[{"name":"histone-serine kinase activity","type":"exact"}],"termid":"GO:0035174"}


id: PBO:0036450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER delivery of tail-anchored membrane proteins (predicted)","termid":"PBO:0036450"}


id: _global:causal_relation_between_entities
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_entities","secondary_identifiers":["RO:0002506"],"termid":"_global:causal_relation_between_entities"}


id: GO:2000541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein geranylgeranylation","termid":"GO:2000539"},{"relation_name":"positively_regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein geranylgeranylation","synonyms":[{"name":"positive regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"positive regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000541"}


id: GO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + H2O = 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate + formate + H+.","definition_xrefs":["RHEA:27282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"2-amino-5-formylamino-6-(5-phosphoribosylamino)pyrimidin-4(3H)-one formate-lyase activity","secondary_identifiers":["EC:3.5.1.102"],"termid":"GO:0043729"}


id: GO:0019600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in toluene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation","termid":"GO:0019600"}


id: PBO:0052350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 3C","termid":"PBO:0052350"}


id: GO:0009408
data:
  {"annotated_genes":["SJAG_04187","SJAG_03815","SJAG_03527","SJAG_01186","SJAG_01584","SJAG_00436","SJAG_04388","SJAG_04567","SJAG_04055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80708,106116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[97470,106803,117341,111827,111828,117342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[74864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_04055":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heat","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006951"],"synonyms":[{"name":"response to heat shock","type":"narrow"}],"termid":"GO:0009408","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: GO:0047936
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H.","definition_xrefs":["EC:1.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose dehydrogenase activity","termid":"GO:0004344"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucose 1-dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLUCOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-glucose dehydrogenase (NAD(P))","type":"related"},{"name":"beta-D-glucose:NAD(P)+ 1-oxidoreductase activity","type":"related"},{"name":"hexose phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0047936","terms_by_termid":{"GO:0047935":null}}


id: PBO:0048951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 2","termid":"PBO:0048951"}


id: PR:O74381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.06c","synonyms":[{"name":"Spom972h-pof9","type":"exact"}],"termid":"PR:O74381"}


id: PBO:0070597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 64","termid":"PBO:0070597"}


id: MONDO:0015928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease in childhood and adulthood associated with a connective tissue disease (obsolete MONDO:0015928)","secondary_identifiers":["Orphanet:182104"],"synonyms":[{"name":"CTD-ILD","type":"exact"},{"name":"secondary ILD in childhood and adulthood associated with a connective tissue disease","type":"exact"}],"termid":"MONDO:0015928","xrefs":{"Monarch":{"xref_id":"0015928"}}}


id: PBO:0051638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP3 pseudogene 1","termid":"PBO:0051638"}


id: PBO:0091916
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CWC23","termid":"PBO:0091916"}


id: PBO:0041453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 62","termid":"PBO:0041453"}


id: PBO:0027128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_late_meiotic_gene_mRNA_during_vegetative_growth","termid":"PBO:0027128"}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: PATO:0000551
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000551 u v light sensitivity value (obsolete PATO:0000551)","termid":"PATO:0000551"}


id: PBO:0070407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 1","termid":"PBO:0070407"}


id: GO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-phosphate = 1D-myo-inositol 3-phosphate. This reaction requires NAD, which dehydrogenates the CHOH group to CO at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the aldehyde at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the CHOH form.","definition_xrefs":["RHEA:10716","EC:5.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-3-phosphate synthase activity","secondary_identifiers":["Reactome:R-HSA-1855178","KEGG_REACTION:R07324","MetaCyc:MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN"],"synonyms":[{"name":"1L-myo-inositol-1-phosphate lyase (isomerizing)","type":"related"},{"name":"D-glucose 6-phosphate cycloaldolase activity","type":"related"},{"name":"glucocycloaldolase activity","type":"related"},{"name":"glucose 6-phosphate cyclase activity","type":"related"},{"name":"glucose-6-phosphate inositol monophosphate cycloaldolase activity","type":"related"},{"name":"inositol 1-phosphate synthatase activity","type":"related"},{"name":"inositol 1-phosphate synthetase activity","type":"related"}],"termid":"GO:0004512"}


id: GO:0072386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an organelle towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"plus-end-directed organelle transport along microtubule","synonyms":[{"name":"microtubule plus-end-directed organelle distribution","type":"narrow"},{"name":"microtubule plus-end-directed organelle localization","type":"exact"}],"termid":"GO:0072386"}


id: GO:1904170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:25651887","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of bleb assembly","synonyms":[{"name":"regulation of cell blebbing","type":"exact"}],"termid":"GO:1904170"}


id: GO:0043248
data:
  {"annotated_genes":["SJAG_04197","SJAG_01652","SJAG_04602","SJAG_00126","SJAG_04844","SJAG_00954","SJAG_02570","SJAG_04290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58635,59669,63198,106140],"is_not":false,"summary":null,"term":"GO:0043248"},{"annotations":[116686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080129"},{"annotations":[81787,117579,101267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070682"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active proteasome complex.","definition_xrefs":["GOC:go_curators","PMID:10872471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00954":null,"SJAG_01652":null,"SJAG_02570":null,"SJAG_04197":null,"SJAG_04290":null,"SJAG_04602":null,"SJAG_04844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"proteasome assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9907900"],"synonyms":[{"name":"26S proteasome assembly","type":"narrow"},{"name":"proteasome complex assembly","type":"exact"},{"name":"proteasome maturation","type":"exact"}],"termid":"GO:0043248","terms_by_termid":{"GO:0043248":null,"GO:0070682":null,"GO:0080129":null}}


id: MONDO:0014418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive centronuclear myopathy in which the cause of the disease is a mutation in the SPEG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive centronuclear myopathy","termid":"MONDO:0015705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"myopathy, centronuclear, 5","secondary_identifiers":["GARD:16035","MEDGEN:863251","UMLS:C4014814","OMIM:615959","DOID:0111222"],"synonyms":[{"name":"CNM5","type":"related"},{"name":"SPEG autosomal recessive centronuclear myopathy","type":"exact"},{"name":"autosomal recessive centronuclear myopathy caused by mutation in SPEG","type":"exact"},{"name":"centronuclear myopathy 5","type":"exact"},{"name":"myopathy, centronuclear, 5","type":"exact"},{"name":"myopathy, centronuclear, type 5","type":"exact"}],"termid":"MONDO:0014418","xrefs":{"Monarch":{"xref_id":"0014418"}}}


id: MONDO:1012828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in rabbits due to a mutation in the ANO5 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, ANO5-related, rabbit","secondary_identifiers":["OMIA:002242-9986"],"termid":"MONDO:1012828","xrefs":{"Monarch":{"xref_id":"1012828"}}}


id: PBO:0079021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 4-1","termid":"PBO:0079021"}


id: PBO:0087816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIA small subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; required, along with Toa1p, for ribosomal protein gene transcription in vivo; homologous to smallest subunit of human and Drosophila TFIIA; protein abundance increases in response to DNA replication stress","termid":"PBO:0087816"}


id: PBO:0072350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 36","termid":"PBO:0072350"}


id: GO:0007189
data:
  {"annotated_genes":["SJAG_01699","SJAG_00472","SJAG_00266","SJAG_02444","SJAG_02311","SJAG_02426","SJAG_01254","SJAG_03081","SJAG_04312","SJAG_01754","SJAG_02481","SJAG_01245","SJAG_04026","SJAG_00574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117374,111343,108657,118406,103643,108307,107710,96000,110832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010619"},{"annotations":[94523,109785,93862,118222,102227],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation of adenylyl cyclase activity which results in an increase in the intracellular concentration of cyclic AMP (cAMP). This pathway is negatively regulated by phosphodiesterase, which cleaves cAMP and terminates the signaling.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:tb","GOC:dph","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-modulating G protein-coupled receptor signaling pathway","termid":"GO:0007188"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010579","GO:0010580","Reactome:R-HSA-170660"],"synonyms":[{"name":"G protein signaling, adenylate cyclase activating pathway","type":"exact"},{"name":"G protein signaling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G protein signalling, adenylate cyclase activating pathway","type":"exact"},{"name":"G protein signalling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G-protein signaling, adenylate cyclase activating pathway","type":"exact"},{"name":"G-protein signaling, adenylyl cyclase activating pathway","type":"exact"},{"name":"G-protein signalling, adenylate cyclase activating pathway","type":"exact"},{"name":"G-protein signalling, adenylyl cyclase activating pathway","type":"exact"},{"name":"GPCR signaling pathway via activation of adenylate cyclase","type":"exact"},{"name":"GPCR signaling pathway via activation of adenylate cyclase activity","type":"exact"},{"name":"activation of adenylate cyclase activity by G-protein signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity involved in G-protein signaling","type":"related"},{"name":"adenylate cyclase-activating GPCR signaling pathway","type":"exact"},{"name":"positive regulation of adenylate cyclase activity by G-protein signaling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase activity by G-protein signalling pathway","type":"related"},{"name":"positive regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0007189","terms_by_termid":{"GO:0010619":null,"GO:0110034":null}}


id: PBO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit","termid":"PBO:0090413"}


id: GO:0045692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryo sac central cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of embryo sac central cell differentiation","termid":"GO:0045691"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryo sac central cell differentiation","synonyms":[{"name":"down regulation of female gametophyte central cell differentiation","type":"exact"},{"name":"down-regulation of female gametophyte central cell differentiation","type":"exact"},{"name":"downregulation of female gametophyte central cell differentiation","type":"exact"},{"name":"inhibition of female gametophyte central cell differentiation","type":"narrow"},{"name":"negative regulation of female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0045692"}


id: GO:0045953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated cytotoxicity","synonyms":[{"name":"down regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"down-regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"downregulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"inhibition of natural killer cell mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of NK cell mediated cell death","type":"exact"},{"name":"negative regulation of NK cell mediated cell killing","type":"exact"},{"name":"negative regulation of NK cell mediated cytolysis","type":"related"},{"name":"negative regulation of NK cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell death","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell killing","type":"exact"},{"name":"negative regulation of natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0045953"}


id: PBO:0045369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 2","termid":"PBO:0045369"}


id: GO:0033373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in mast cell secretory granule","termid":"GO:0033370"},{"relation_name":"part_of","term_name":"protease localization to mast cell secretory granule","termid":"GO:0033368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protease location in mast cell secretory granule","synonyms":[{"name":"maintenance of protease localization in mast cell secretory granule","type":"related"},{"name":"mast cell protease retention","type":"exact"}],"termid":"GO:0033373"}


id: GO:0010632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell migration.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell migration","termid":"GO:0010632"}


id: PBO:0039105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook DNA binding motif containing 1","termid":"PBO:0039105"}


id: MONDO:0005942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute and potentially fatal metabolic disorder characterized by cerebral edema, fatty liver and hypoglycemia. It occurs primarily in children and has been associated with the use of aspirin for the treatment of viral infections. However, it can also occur in the absence of aspirin use.","definition_xrefs":["NCIT:C34983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reye syndrome","secondary_identifiers":["MESH:D012202","SCTID:74351001","UMLS:C0035400","Orphanet:3096","ICD9:331.81","EFO:0007467","MedDRA:10039012","GARD:7570","ICD10CM:G93.7","icd11.foundation:649014905","DOID:14525","MEDGEN:19772"],"synonyms":[{"name":"Reye's syndrome","type":"exact"}],"termid":"MONDO:0005942","xrefs":{"Monarch":{"xref_id":"0005942"}}}


id: GO:0072344
data:
  {"annotated_genes":["SJAG_02746","SJAG_00188","SJAG_03189","SJAG_00898","SJAG_01497","SJAG_02096","SJAG_03106","SJAG_05000","SJAG_03428","SJAG_01074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65327,71521,77041,78308,79892,104930,105408,107441,117928],"is_not":false,"summary":null,"term":"GO:0072344"},{"annotations":[116252],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"A process of translational elongation that takes place when a ribosome has stalled during translation, and results in freeing the ribosome from the stalled translation complex.","definition_xrefs":["PMID:19170872","PMID:20117091","PMID:18557701","PMID:20185543","GOC:mah","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"ribosome disassembly","termid":"GO:0032790"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03106":null,"SJAG_03189":null,"SJAG_03428":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"rescue of stalled ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072344","terms_by_termid":{"GO:0072344":null,"GO:0140708":null}}


id: PBO:0082561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide synthase subunit; single-span ER membrane protein associated with Lag1p and Lac1p and required for ceramide synthase activity, null mutant grows extremely slowly and is defective in ceramide synthesis","termid":"PBO:0082561"}


id: PBO:0042379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD226 molecule","termid":"PBO:0042379"}


id: MONDO:0032622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 17","secondary_identifiers":["UMLS:C4748786","OMIM:618239","GARD:18372","DOID:0112078","MEDGEN:1648418"],"synonyms":[{"name":"MC1DN17","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 17","type":"related"}],"termid":"MONDO:0032622","xrefs":{"Monarch":{"xref_id":"0032622"}}}


id: PBO:0028578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_chromosome_segregation,_with_binucleate_and_anucleate_compartment_formation","termid":"PBO:0028578"}


id: GO:0098829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of folic into the blood by absorption from the small intestine.","definition_xrefs":["GOC:BHF","GOC:hal","GOC:dos","PMID:19762432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal folate absorption","termid":"GO:0098829"}


id: PBO:0076545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAT antisense RNA 1","termid":"PBO:0076545"}


id: PBO:0046597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 7","termid":"PBO:0046597"}


id: MONDO:0035161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"progressive dementia with neuroserpin inclusion bodies","secondary_identifiers":["ICD10CM:G40.3","Orphanet:530303","MEDGEN:1842194","UMLS:C5680143","GARD:22208"],"synonyms":[{"name":"late-onset familial encephalopathy with neuroserpin inclusion bodies","type":"exact"}],"termid":"MONDO:0035161","xrefs":{"Monarch":{"xref_id":"0035161"}}}


id: GO:0038070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038070)","synonyms":[{"name":"MAP kinase kinase kinase activity involved in cell wall biogenesis","type":"exact"},{"name":"MAP3K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038070"}


id: PBO:0068275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASE11 and RNASE12 antisense RNA 1","termid":"PBO:0068275"}


id: GO:0090189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.","definition_xrefs":["GOC:yaf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"branching involved in ureteric bud morphogenesis","termid":"GO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in ureteric bud morphogenesis","termid":"GO:0090189"}


id: MONDO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to orient parts of the body.","definition_xrefs":["DOID:0060138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autotopagnosia","secondary_identifiers":["MEDGEN:65883","UMLS:C0234511"],"termid":"MONDO:0000668","xrefs":{"Monarch":{"xref_id":"0000668"}}}


id: MONDO:0009199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolaminosis","secondary_identifiers":["OMIM:227150","MESH:C562651","SCTID:64235006","MEDGEN:120637","ICD9:270.8","UMLS:C0268423"],"synonyms":[{"name":"ethanolamine kinase deficiency","type":"related"},{"name":"ethanolaminosis","type":"exact"}],"termid":"MONDO:0009199","xrefs":{"Monarch":{"xref_id":"0009199"}}}


id: PBO:0059578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1","termid":"PBO:0059578"}


id: RO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","termid":"RO:0002216"}


id: PBO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor","termid":"PBO:0001797"}


id: PBO:0027738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphatase_activity","termid":"PBO:0027738"}


id: PBO:0043215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 2","termid":"PBO:0043215"}


id: MONDO:0021230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the uterine cervix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervix neoplasm","secondary_identifiers":["MEDGEN:40201","NCIT:C2940","ONCOTREE:CERVIX","UMLS:C0007873"],"synonyms":[{"name":"Cervical neoplasm","type":"exact"},{"name":"cervical tumor","type":"exact"},{"name":"cervical tumour","type":"exact"},{"name":"cervix","type":"related"},{"name":"cervix neoplasm","type":"exact"},{"name":"cervix tumor","type":"exact"},{"name":"cervix tumour","type":"exact"},{"name":"cervix uteri neoplasm","type":"exact"},{"name":"cervix uteri tumor","type":"exact"},{"name":"cervix uteri tumour","type":"exact"},{"name":"neoplasm of cervix","type":"exact"},{"name":"neoplasm of cervix uteri","type":"exact"},{"name":"neoplasm of the cervix","type":"exact"},{"name":"neoplasm of the cervix uteri","type":"exact"},{"name":"neoplasm of the uterine cervix","type":"exact"},{"name":"neoplasm of uterine cervix","type":"exact"},{"name":"tumor of cervix","type":"exact"},{"name":"tumor of cervix uteri","type":"exact"},{"name":"tumor of the cervix","type":"exact"},{"name":"tumor of the cervix uteri","type":"exact"},{"name":"tumor of the uterine cervix","type":"exact"},{"name":"tumor of uterine cervix","type":"exact"},{"name":"tumour of cervix","type":"exact"},{"name":"tumour of cervix uteri","type":"exact"},{"name":"tumour of the cervix","type":"exact"},{"name":"tumour of the cervix uteri","type":"exact"},{"name":"tumour of the uterine cervix","type":"exact"},{"name":"tumour of uterine cervix","type":"exact"},{"name":"uterine cervix neoplasm (disease)","type":"exact"},{"name":"uterine cervix tumor","type":"exact"},{"name":"uterine cervix tumour","type":"exact"}],"termid":"MONDO:0021230","xrefs":{"Monarch":{"xref_id":"0021230"}}}


id: PBO:0085861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YDL211C has a paralog, TDA7, that arose from the whole genome duplication","termid":"PBO:0085861"}


id: GO:0051074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits.","definition_xrefs":["GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tetramerization activity (obsolete GO:0051074)","synonyms":[{"name":"protein tetramerization activity","type":"exact"}],"termid":"GO:0051074"}


id: MONDO:0006650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ischemia or infarction of the spinal cord in the distribution of the anterior spinal artery, which supplies the ventral two-thirds of the spinal cord. This condition is usually associated with atherosclerosis of the aorta and may result from dissection of an aortic aneurysm or rarely dissection of the anterior spinal artery. Clinical features include weakness and loss of pain and temperature sensation below the level of injury, with relative sparing of position and vibratory sensation. (From Adams et al., Principles of Neurology, 6th ed, pp1249-50)","definition_xrefs":["MESH:D020759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior spinal artery syndrome","secondary_identifiers":["SCTID:2972007","UMLS:C0221069","MedDRA:10002703","EFO:1000810","ICD9:433.80","DOID:6712","MEDGEN:65125"],"synonyms":[{"name":"anterior spinal artery syndromic disease","type":"exact"},{"name":"syndromic disease of anterior spinal artery","type":"exact"}],"termid":"MONDO:0006650","xrefs":{"Monarch":{"xref_id":"0006650"}}}


id: MONDO:0014688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous mutation in the KIAA0586 gene on chromosome 14q23.","definition_xrefs":["DOID:0110096","PMID:26166481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with Jeune asphyxiating thoracic dystrophy","termid":"MONDO:0018342"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 14 with polydactyly","secondary_identifiers":["OMIM:616546","UMLS:C4225286","GARD:18467","MEDGEN:901479"],"synonyms":[{"name":"SRTD14","type":"exact"},{"name":"short-rib thoracic dysplasia 14 with polydactyly","type":"exact"}],"termid":"MONDO:0014688","xrefs":{"Monarch":{"xref_id":"0014688"}}}


id: PBO:0078121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-3","termid":"PBO:0078121"}


id: PBO:0078893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 4-2","termid":"PBO:0078893"}


id: GO:0031619
data:
  {"annotated_genes":["SJAG_03327","SJAG_03698","SJAG_01805","SJAG_03926","SJAG_05019","SJAG_07002","SJAG_04259","SJAG_05295","SJAG_01224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89579,92056,95569,100402,103130,109634,115623,117380,118909],"is_not":false,"summary":null,"term":"GO:0031619"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister centromeres and kinetochores of one chromosome are fused and orientated so the chromosomes attach to microtubules that emanate from the same spindle pole. This process ensures that homologous l chromosomes are segregated at anaphase of meiosis I.","definition_xrefs":["PMID:15062096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01224":null,"SJAG_01805":null,"SJAG_03327":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_04259":null,"SJAG_05019":null,"SJAG_05295":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013","GO:0051179"],"is_obsolete":false,"name":"homologous chromosome orientation in meiotic metaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homologous chromosome orientation during meiosis","type":"related"},{"name":"homologous chromosome orientation during meiosis I","type":"related"}],"termid":"GO:0031619","terms_by_termid":{"GO:0031619":null}}


id: FYPO:0007793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which an increase in RNA level that occurs as part of a cellular response to oxidative stress begins later than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:10428959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress during vegetative growth","termid":"FYPO:0001340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of increase in RNA level during cellular response to oxidative stress","synonyms":[{"name":"delayed increase in RNA level during cellular response to oxidative stress","type":"exact"},{"name":"delayed onset of increase in RNA level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"delayed onset of increase in RNA level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"delayed onset of increase in RNA level in response to oxidative stress","type":"exact"},{"name":"delayed onset of increase in transcript level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007793"}


id: GO:1900713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of violaceol I biosynthetic process","synonyms":[{"name":"regulation of violaceol I anabolism","type":"exact"},{"name":"regulation of violaceol I biosynthesis","type":"exact"},{"name":"regulation of violaceol I formation","type":"exact"},{"name":"regulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900713"}


id: PBO:0057875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3180-4","termid":"PBO:0057875"}


id: GO:0032635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-6 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-6 production","secondary_identifiers":["GO:0042226","GO:0072604"],"synonyms":[{"name":"IL-6 production","type":"exact"},{"name":"interleukin-6 biosynthetic process","type":"narrow"},{"name":"interleukin-6 secretion","type":"narrow"}],"termid":"GO:0032635"}


id: SO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A guanosine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanosine","synonyms":[{"name":"modified guanosine","type":"exact"}],"termid":"SO:0001276"}


id: PBO:0084543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PAK family of serine/threonine protein kinases; similar to Ste20p; involved in down-regulation of sterol uptake; proposed to be a downstream effector of Cdc42p during polarized growth; SKM1 has a paralog, CLA4, that arose from the whole genome duplication","termid":"PBO:0084543"}


id: GO:0033427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CAA codon-amino acid adaptor activity","synonyms":[{"name":"glutamine tRNA","type":"related"}],"termid":"GO:0033427"}


id: PBO:0109841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily G member 1","termid":"PBO:0109841"}


id: GO:0018121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + L-asparagine = nicotinamide + N2-(ADP-D-ribosyl)-L-asparagine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)-asparagine ADP-ribosyltransferase activity (obsolete GO:0018121)","termid":"GO:0018121"}


id: PBO:0056741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meteorin, glial cell differentiation regulator","termid":"PBO:0056741"}


id: PBO:0081023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 4","termid":"PBO:0081023"}


id: MONDO:0100217
data:
  {"annotated_genes":["SJAG_04085"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87497],"is_not":false,"summary":null,"term":"MONDO:0100217"}]},"cv_name":"mondo","definition":"Any developmental delay with short stature, dysmorphic facial features, and sparse hair in which the cause of the disease is a mutation in the DPH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental delay with short stature, dysmorphic facial features, and sparse hair","termid":"MONDO:0031632"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04085":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with short stature, dysmorphic facial features, and sparse hair 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620062","MEDGEN:1823996","UMLS:C5774223","DOID:0070478"],"synonyms":[{"name":"DEDSSH2","type":"exact"},{"name":"diphthamide deficiency syndrome 2","type":"exact"}],"termid":"MONDO:0100217","terms_by_termid":{"MONDO:0100217":null},"xrefs":{"Monarch":{"xref_id":"0100217"}}}


id: PR:Q9UT72
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rfp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase complex slx8-rfp subunit rfp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.18","synonyms":[{"name":"RING finger protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rfp2","type":"exact"}],"termid":"PR:Q9UT72"}


id: GO:1904750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GOC:nc","PMID:24415760","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to nucleus","termid":"GO:1900181"},{"relation_name":"is_a","term_name":"regulation of protein localization to nucleolus","termid":"GO:1904749"},{"relation_name":"negatively_regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to nucleolus","synonyms":[{"name":"down regulation of protein localisation in nucleolus","type":"exact"},{"name":"down regulation of protein localisation to nucleolus","type":"exact"},{"name":"down regulation of protein localization in nucleolus","type":"exact"},{"name":"down regulation of protein localization to nucleolus","type":"exact"},{"name":"down-regulation of protein localisation in nucleolus","type":"exact"},{"name":"down-regulation of protein localisation to nucleolus","type":"exact"},{"name":"down-regulation of protein localization in nucleolus","type":"exact"},{"name":"down-regulation of protein localization to nucleolus","type":"exact"},{"name":"downregulation of protein localisation in nucleolus","type":"exact"},{"name":"downregulation of protein localisation to nucleolus","type":"exact"},{"name":"downregulation of protein localization in nucleolus","type":"exact"},{"name":"downregulation of protein localization to nucleolus","type":"exact"},{"name":"inhibition of protein localisation in nucleolus","type":"narrow"},{"name":"inhibition of protein localisation to nucleolus","type":"narrow"},{"name":"inhibition of protein localization in nucleolus","type":"narrow"},{"name":"inhibition of protein localization to nucleolus","type":"narrow"},{"name":"negative regulation of protein localisation in nucleolus","type":"exact"},{"name":"negative regulation of protein localisation to nucleolus","type":"exact"},{"name":"negative regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904750"}


id: MONDO:0006611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of non-necrotizing granulomas in the skin. It may be a manifestation of systemic sarcoidosis or may also arise in isolation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin sarcoidosis","secondary_identifiers":["DOID:13402","Wikipedia:Cutaneous_manifestations_of_sarcoidosis","NCIT:C34996","SCTID:55941000","MEDGEN:19872","EFO:1000767","ICD10CM:D86.3","UMLS:C0036203"],"synonyms":[{"name":"cutaneous sarcoid","type":"exact"},{"name":"cutaneous sarcoidosis","type":"exact"},{"name":"sarcoidosis of zone of skin","type":"exact"},{"name":"zone of skin sarcoidosis","type":"exact"}],"termid":"MONDO:0006611","xrefs":{"Monarch":{"xref_id":"0006611"}}}


id: PBO:0051339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-14 (pseudogene)","termid":"PBO:0051339"}


id: PBO:0065744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYD and CARD domain containing","termid":"PBO:0065744"}


id: MONDO:0014417
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88031,88032],"is_not":false,"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 38 (SCA38) is a subtype of autosomal dominant cerebellar ataxia type 3 characterized by the adult-onset (average age: 40 years) of truncal ataxia, gait disturbance and gaze-evoked nystagmus. The disease is slowly progressive with dysarthria and limb ataxia following. Additional manifestations include diplopia and axonal neuropathy.","definition_xrefs":["Orphanet:423296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0000426","MONDO:0005066","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1379865","GARD:12369","DOID:0050985","OMIM:615957","SCTID:734021001","UMLS:C4518337"],"synonyms":[{"name":"SCA38","type":"exact"},{"name":"spinocerebellar ataxia 38","type":"related"},{"name":"spinocerebellar ataxia type 38","type":"exact"}],"termid":"MONDO:0014417","terms_by_termid":{"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0014417"}}}


id: GO:1990048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances in neuronal dense core vesicles along axonal microtubules towards the presynapse.","definition_xrefs":["PMID:23358451","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"dense core granule cytoskeletal transport","termid":"GO:0099519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"anterograde neuronal dense core vesicle transport","synonyms":[{"name":"anterograde dense core granule trafficking","type":"exact"},{"name":"anterograde dense core granule transport","type":"exact"}],"termid":"GO:1990048"}


id: PBO:0110117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110117"}


id: PBO:0047313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 2","termid":"PBO:0047313"}


id: FYPO:0001354
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121188],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[121493,120970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121091],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[121258,121059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121189],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component assembly at the cellular level is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_04280","SJAG_02392","SJAG_04522"],"name":"abnormal cellular component assembly during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143","SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","sty1delta","mid1delta","pom1delta"],"synonyms":[{"name":"abnormal cellular component assembly at cellular level during vegetative growth","type":"exact"},{"name":"abnormal cellular component assembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001354","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0160119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process that is induced by intracellular copper accumulation.","definition_xrefs":["PMID:35298263","PMID:35354936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuproptosis","termid":"GO:0160119"}


id: MOD:00722
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-glutamine residue with one methyl group.","definition_xrefs":["OMSSA:14","Unimod:34#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated glutamine","termid":"MOD:00659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-glutamine","synonyms":[{"name":"Me1Gln","type":"exact"},{"name":"methylq","type":"exact"}],"termid":"MOD:00722"}


id: PBO:0026675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0026675"}


id: PR:O14192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56E4.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C56E4.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.03","synonyms":[{"name":"Spom972h-SPAC56E4.03","type":"exact"}],"termid":"PR:O14192"}


id: MONDO:0005487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder in which the individual suffers from both symptoms that qualify as schizophrenia and symptoms that qualify as a mood disorder (e.g., depression or bipolar disorder) for a substantial portion (but not all) of the active period of the illness; for the remainder of the active period of the illness, the individual suffers from delusions or hallucinations in the absence of prominent mood symptoms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizoaffective disorder","secondary_identifiers":["DOID:5418","EFO:0005411","icd11.foundation:106339515","MEDGEN:11334","ICD9:295.7","NCIT:C94378","UMLS:C0036337"],"termid":"MONDO:0005487","xrefs":{"Monarch":{"xref_id":"0005487"}}}


id: GO:1905848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidopamine","synonyms":[{"name":"activation of cellular response to oxidopamine","type":"narrow"},{"name":"up regulation of cellular response to oxidopamine","type":"exact"},{"name":"up-regulation of cellular response to oxidopamine","type":"exact"},{"name":"upregulation of cellular response to oxidopamine","type":"exact"}],"termid":"GO:1905848"}


id: GO:0031415
data:
  {"annotated_genes":["SJAG_02726","SJAG_02920","SJAG_04179","SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71707,72597,77649,79047],"is_not":false,"summary":null,"term":"GO:0031415"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to an N-terminal Ser, Ala, Gly, or Thr residue of a protein acceptor molecule. In Saccharomyces the complex includes Nat1p and Ard1p, and may contain additional proteins.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02726":null,"SJAG_02920":null,"SJAG_04179":null,"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NatA complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"N-terminal acetyltransferase A complex","type":"exact"}],"termid":"GO:0031415","terms_by_termid":{"GO:0031415":null}}


id: PBO:0027671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_spindle_assembly_checkpoint_signaling","termid":"PBO:0027671"}


id: PBO:0080391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS25 pseudogene 1","termid":"PBO:0080391"}


id: SO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoded within a transposable element. For example gag, int, env and pol are the transposable element genes of the TY element in yeast.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_gene","synonyms":[{"name":"transposable element gene","type":"exact"}],"termid":"SO:0000111"}


id: MONDO:0015798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multinodular intermediate fibroblastic neoplasm that arises from soft tissue or viscera, in children and young adults. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes, and plasma cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory myofibroblastic tumor","secondary_identifiers":["DOID:0050905","UMLS:C0334121","MedDRA:10067917","ICDO:8825/1","GARD:7146","MEDGEN:137723","Orphanet:178342","NCIT:C6481","MESH:D006104","ONCOTREE:IMT"],"synonyms":[{"name":"IMT","type":"exact"},{"name":"inflammatory fibrosarcoma","type":"exact"},{"name":"inflammatory myofibroblastic neoplasm","type":"exact"},{"name":"inflammatory myofibroblastic tumor","type":"exact"},{"name":"inflammatory pseudotumor","type":"exact"}],"termid":"MONDO:0015798","xrefs":{"Monarch":{"xref_id":"0015798"}}}


id: PBO:0078170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-1","termid":"PBO:0078170"}


id: PBO:0057349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 544a","termid":"PBO:0057349"}


id: GO:0032029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"myosin tail binding","termid":"GO:0032029"}


id: GO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the melanosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"melanosome","termid":"GO:0042470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"melanosome lumen","termid":"GO:0034493"}


id: FYPO:0002217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable, elongated, and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved elongated vegetative cell population (obsolete FYPO:0002217)","synonyms":[{"name":"population of curved viable long cells","type":"exact"},{"name":"viable curved long vegetative cell population","type":"exact"}],"termid":"FYPO:0002217"}


id: PBO:0058093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4309","termid":"PBO:0058093"}


id: PBO:0004841
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.3.2.2","termid":"PBO:0004841"}


id: PBO:0063966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PU.1 (SPI1) induced regulator of S100A8 and S100A9 alarmin transcription 1","termid":"PBO:0063966"}


id: GO:0036299
data:
  {"annotated_genes":["SJAG_00727"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91368],"is_not":false,"summary":null,"term":"GO:0036299"}]},"cv_name":"biological_process","definition":"Removal of a DNA interstrand crosslink (a covalent attachment of DNA bases on opposite strands of the DNA) and restoration of the DNA by a mechanism that does not involve homologous DNA recombination.","definition_xrefs":["GOC:vw","PMID:11154259","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstrand cross-link repair","termid":"GO:0036297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00727":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"non-recombinational interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"recombination-independent ICL repair","type":"exact"},{"name":"recombination-independent interstrand cross-link repair","type":"exact"}],"termid":"GO:0036299","terms_by_termid":{"GO:0036299":null}}


id: GO:0046470
data:
  {"annotated_genes":["SJAG_00812","SJAG_04110","SJAG_04319","SJAG_02980","SJAG_00825","SJAG_01918","SJAG_02902","SJAG_03524","SJAG_03154","SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61882,57113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[94831,74179,96426,71917,79911,98200,106133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[118825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00812":null,"SJAG_00825":null,"SJAG_00946":null,"SJAG_01918":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03154":null,"SJAG_03524":null,"SJAG_04110":null,"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"phosphatidylcholine metabolism","type":"exact"}],"termid":"GO:0046470","terms_by_termid":{"GO:0006656":null,"GO:0006657":null,"GO:0034638":null}}


id: GO:1904588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoprotein stimulus.","definition_xrefs":["PMID:14597422","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glycoprotein","synonyms":[{"name":"cellular response to glycoproteins","type":"exact"}],"termid":"GO:1904588"}


id: PBO:0057211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378a","termid":"PBO:0057211"}


id: GO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"growth plate cartilage development","termid":"GO:0003417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}


id: PBO:0077914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 5","termid":"PBO:0077914"}


id: PBO:0066728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 25","termid":"PBO:0066728"}


id: PBO:0049322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIA subunit 1","termid":"PBO:0049322"}


id: SO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of nucleotide bases in tRNA. It contains several dihydrouracil residues.","definition_xrefs":["ISBN:071671920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHU_loop","synonyms":[{"name":"D loop","type":"related"},{"name":"DHU loop","type":"exact"}],"termid":"SO:0001176"}


id: FYPO:0002367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me2 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002367"}


id: PBO:0038625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical chemokine receptor 1 (Duffy blood group)","termid":"PBO:0038625"}


id: FYPO:0008146
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121287,121289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[121288,121290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[121275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of non-coding RNA transcribed measured in a cell is higher than normal.","definition_xrefs":["PMID:25989903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03118"],"name":"increased ncRNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"termid":"FYPO:0008146","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004982":null}}


id: GO:0045737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CDK activity.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0000079"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle","termid":"GO:0045787"},{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"positive regulation of cyclin-dependent protein kinase activity","termid":"GO:1904031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"positive regulation of CDK activity","type":"broad"},{"name":"positive regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"stimulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"up regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"up-regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"upregulation of cyclin-dependent protein kinase activity","type":"broad"}],"termid":"GO:0045737"}


id: MONDO:0044877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, immune-mediated disorder characterized by cerebellar degeneration due to the presence of an often undetected malignancy (usually carcinoma or lymphoma) in an anatomic site other than the cerebellum. Signs and symptoms include progressive ataxia, dysarthria, and nystagmus.","definition_xrefs":["NCIT:C4685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic neurologic syndrome","termid":"MONDO:0018215"},{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"paraneoplastic cerebellar degeneration","secondary_identifiers":["icd11.foundation:1087616692","MESH:D020362","UMLS:C0393534","GARD:22493","MEDGEN:98273","Orphanet:623626"],"synonyms":[{"name":"paraneoplastic cerebellar degeneration","type":"exact"}],"termid":"MONDO:0044877","xrefs":{"Monarch":{"xref_id":"0044877"}}}


id: GO:0030218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires specializes features of an erythrocyte.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"},{"relation_name":"part_of","term_name":"erythrocyte homeostasis","termid":"GO:0034101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte differentiation","secondary_identifiers":["Wikipedia:Erythropoiesis"],"synonyms":[{"name":"RBC differentiation","type":"exact"},{"name":"erythrocyte cell differentiation","type":"exact"},{"name":"erythropoiesis","type":"exact"},{"name":"red blood cell differentiation","type":"exact"}],"termid":"GO:0030218"}


id: PBO:0053280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin-like receptor pseudogene 1","termid":"PBO:0053280"}


id: PBO:0040770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 5","termid":"PBO:0040770"}


id: MONDO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long qt syndrome 8","secondary_identifiers":["OMIM:618447","DOID:0110649"],"synonyms":[{"name":"LONG QT SYNDROME 8","type":"related"},{"name":"LQT8","type":"related"}],"termid":"MONDO:0032756","xrefs":{"Monarch":{"xref_id":"0032756"}}}


id: GO:0045965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving ecdysteroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid metabolic process","termid":"GO:0007553"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ecdysteroid metabolic process","synonyms":[{"name":"down regulation of ecdysteroid metabolic process","type":"exact"},{"name":"down-regulation of ecdysteroid metabolic process","type":"exact"},{"name":"downregulation of ecdysteroid metabolic process","type":"exact"},{"name":"inhibition of ecdysteroid metabolic process","type":"narrow"},{"name":"negative regulation of ecdysteroid metabolism","type":"exact"}],"termid":"GO:0045965"}


id: PBO:0028367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum","termid":"PBO:0028367"}


id: GO:0018656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene + O2 + NADH + H+ = H2O + NAD+ + phenanthrene-3,4-oxide.","definition_xrefs":["UM-BBD_reactionID:r0508","PMID:1599252"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene 3,4-monooxygenase activity (obsolete GO:0018656)","termid":"GO:0018656"}


id: MONDO:0015477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pinnae fistula or cyst is a rare otorhinolaryngological malformation characterized by the presence of a, usually unilateral, sinus tract or cyst located in the vicinity of the auricle (most frequently identified by a small pit near the anterior margin of the first ascending portion of the helix). Typically, patients are asymptomatic and usually only present symptoms (pain, erythema, discharge from pit) in relation to infection. Renal and inner ear anomalies may be associated.","definition_xrefs":["Orphanet:155838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinnae fistula or cyst","secondary_identifiers":["MEDGEN:1842452","UMLS:C5680633","GARD:19974"],"termid":"MONDO:0015477","xrefs":{"Monarch":{"xref_id":"0015477"}}}


id: PBO:0039827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase 1","termid":"PBO:0039827"}


id: PBO:0080147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vav guanine nucleotide exchange factor 3","termid":"PBO:0080147"}


id: PBO:0067376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 478, pseudogene","termid":"PBO:0067376"}


id: MOD:01413
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a trihydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trihydroxylated residue","termid":"MOD:01409"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trihydroxylated leucine","synonyms":[{"name":"Hy3Leu","type":"exact"}],"termid":"MOD:01413"}


id: PBO:0083032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta-1-pyrroline-5-carboxylate dehydrogenase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; deficiency of human homolog ALDH4A1 causes type II hyperprolinemia (HPII), an autosomal recessive inborn error of metabolism; human homolog ALDH4A1 can complement yeast null mutant","termid":"PBO:0083032"}


id: MONDO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of many genes expressed by adipose and other non-epithelial tissues.","definition_xrefs":["NCIT:C53557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"normal breast-like subtype of breast carcinoma","secondary_identifiers":["UMLS:C3642471","EFO:1000402","MEDGEN:771111"],"synonyms":[{"name":"normal breast-like subtype of breast cancer","type":"exact"},{"name":"normal breast-like subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0006324","xrefs":{"Monarch":{"xref_id":"0006324"}}}


id: GO:0043480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in a tissue, occurring in response to an external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation in tissues","synonyms":[{"name":"organismal pigment accumulation","type":"exact"}],"termid":"GO:0043480"}


id: MONDO:0971000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 93","secondary_identifiers":["DOID:0070592","OMIM:620849","UMLS:C5935626","MEDGEN:1857096"],"termid":"MONDO:0971000","xrefs":{"Monarch":{"xref_id":"0971000"}}}


id: PBO:0044795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 8, pseudogene","termid":"PBO:0044795"}


id: SO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat_region containing repeat_units of 1 bp that is repeated multiple times in tandem.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomeric_repeat","synonyms":[{"name":"monomeric repeat","type":"exact"}],"termid":"SO:0001934"}


id: MONDO:0005842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the maxillary sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary sinusitis","secondary_identifiers":["SCTID:88348008","MEDGEN:44313","MESH:D015523","NCIT:C34809","UMLS:C0024959","EFO:0007361","DOID:2051"],"termid":"MONDO:0005842","xrefs":{"Monarch":{"xref_id":"0005842"}}}


id: PBO:0027985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_normal_septum_morphology","termid":"PBO:0027985"}


id: MONDO:0007094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the LAMB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 1A","secondary_identifiers":["DOID:0110054","MEDGEN:859840","MESH:C538240","OMIM:104530","UMLS:C4011403","GARD:15038"],"synonyms":[{"name":"AI1A","type":"exact"},{"name":"LAMB3 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in LAMB3","type":"exact"},{"name":"amelogenesis imperfecta hypoplastic type IA","type":"exact"},{"name":"amelogenesis imperfecta local hypoplastic","type":"related"},{"name":"amelogenesis imperfecta type IA","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic type 1A","type":"related"},{"name":"amelogenesis imperfecta, type 1A","type":"related"},{"name":"amelogenesis imperfecta, type IA","type":"related"},{"name":"local hypoplastic amelogenesis imperfecta","type":"related"}],"termid":"MONDO:0007094","xrefs":{"Monarch":{"xref_id":"0007094"}}}


id: PBO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1752 family protein, involved in regulation of transcription (predicted)","termid":"PBO:0000872"}


id: PBO:0062042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 12","termid":"PBO:0062042"}


id: PBO:0084356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lectin-like protein involved in flocculation; cell wall protein that binds mannose chains on the surface of other cells, confers floc-forming ability that is chymotrypsin sensitive and heat resistant; important for co-flocculation with other yeasts, mediating interaction with specific species; FLO1 has a paralog, FLO5, that arose from a segmental duplication","termid":"PBO:0084356"}


id: PBO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 27","termid":"PBO:0042166"}


id: PBO:0044122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 8","termid":"PBO:0044122"}


id: FYECO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethanol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethanol","termid":"FYECO:0000212"}


id: GO:0051460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of corticotropic hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of corticotropin secretion","termid":"GO:0051459"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"corticotropin secretion","termid":"GO:0051458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of corticotropin secretion","synonyms":[{"name":"down regulation of adrenocorticotropin secretion","type":"exact"},{"name":"down-regulation of adrenocorticotropin secretion","type":"exact"},{"name":"downregulation of adrenocorticotropin secretion","type":"exact"},{"name":"inhibition of adrenocorticotropin secretion","type":"narrow"},{"name":"negative regulation of ACTH secretion","type":"exact"},{"name":"negative regulation of adrenocorticotropic hormone secretion","type":"exact"},{"name":"negative regulation of adrenocorticotropin secretion","type":"exact"},{"name":"negative regulation of adrenotropic hormone secretion","type":"exact"},{"name":"negative regulation of adrenotropin secretion","type":"exact"},{"name":"negative regulation of corticotropic hormone secretion","type":"exact"}],"termid":"GO:0051460"}


id: GO:0043075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The nucleus of a plant pollen cell, the male gamete, and its descendents.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm cell nucleus (sensu Magnoliophyta) (obsolete GO:0043075)","synonyms":[{"name":"pollen germ cell nucleus","type":"exact"},{"name":"pollen germ-cell nucleus","type":"exact"},{"name":"sperm cell nucleus (sensu Magnoliophyta)","type":"exact"}],"termid":"GO:0043075"}


id: GO:0070780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrosphingosine 1-phosphate + H2O = dihydrosphingosine + phosphate.","definition_xrefs":["GOC:pde","PMID:12815058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydrosphingosine-1-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:DHS-PHOSPHATASE-RXN","RHEA:27514"],"synonyms":[{"name":"dihydrosphingosine-1-phosphate phosphohydrolase activity","type":"exact"},{"name":"sphinganine-1-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0070780"}


id: GO:0102968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeranial + NADP = (6E)-8-oxogeranial + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:32611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"10-hydroxygeranial oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9369"],"termid":"GO:0102968"}


id: PBO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements human PIGW","termid":"PBO:0002627"}


id: PBO:0071135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 137","termid":"PBO:0071135"}


id: MONDO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a retroperitoneal space.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retroperitoneal cancer","termid":"MONDO:0005941"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"retroperitoneal sarcoma","secondary_identifiers":["SCTID:307219002","DOID:12341","MEDGEN:107937","UMLS:C0585129","NCIT:C4832"],"synonyms":[{"name":"retroperitoneal sarcoma","type":"exact"},{"name":"retroperitoneal space sarcoma","type":"exact"},{"name":"sarcoma of retroperitoneal space","type":"exact"}],"termid":"MONDO:0001501","xrefs":{"Monarch":{"xref_id":"0001501"}}}


id: GO:0102773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a dihydroceramide = ADP + H+ + a dihydroceramide 1-phosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroceramide kinase activity (obsolete GO:0102773)","termid":"GO:0102773"}


id: PBO:0117248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric iron reductase (NADPH) Frp1","termid":"PBO:0117248"}


id: PBO:0078548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 39","termid":"PBO:0078548"}


id: MONDO:1011656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysplasia syndrome, non-human animal","secondary_identifiers":["OMIA:002090"],"termid":"MONDO:1011656","xrefs":{"Monarch":{"xref_id":"1011656"}}}


id: PBO:0055999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated pseudogene 2","termid":"PBO:0055999"}


id: PBO:0047296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2 pseudogene 3","termid":"PBO:0047296"}


id: GO:0018619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzene + H+ + NADH + O2 = cis-cyclohexa-3,5-diene-1,2-diol + NAD+.","definition_xrefs":["EC:1.14.12.3","RHEA:13813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzene 1,2-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0079","KEGG_REACTION:R03543","MetaCyc:BENZENE-12-DIOXYGENASE-RXN"],"synonyms":[{"name":"benzene dioxygenase activity","type":"related"},{"name":"benzene hydroxylase activity","type":"related"},{"name":"benzene,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018619"}


id: MONDO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory myofibroblastic tumor (obsolete MONDO:0000522)","termid":"MONDO:0000522","xrefs":{"Monarch":{"xref_id":"0000522"}}}


id: PBO:0039904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac/Cdc42 guanine nucleotide exchange factor 6","termid":"PBO:0039904"}


id: PR:O74369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- css1 gene.","definition_xrefs":["UniProtKB:O74369","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphosphingolipids phospholipase C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.01c","synonyms":[{"name":"IPS phospholipase C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPS-PLC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-css1","type":"exact"}],"termid":"PR:O74369"}


id: GO:1902855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of non-motile cilium assembly.","definition_xrefs":["GO_REF:0000058","PMID:23807208","GOC:kmv","GOC:cilia","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"regulates","term_name":"non-motile cilium assembly","termid":"GO:1905515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of non-motile cilium assembly","synonyms":[{"name":"regulation of immotile primary cilium assembly","type":"related"},{"name":"regulation of nonmotile primary cilia assembly","type":"related"},{"name":"regulation of nonmotile primary cilium assembly","type":"related"},{"name":"regulation of sensory cilium assembly","type":"related"},{"name":"regulation of sensory cilium biogenesis","type":"related"}],"termid":"GO:1902855"}


id: MOD:01271
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:271#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site Y","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01271"}


id: PBO:0059604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 16","termid":"PBO:0059604"}


id: GO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuromedin B receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"neuromedin B receptor binding","synonyms":[{"name":"neuromedin B receptor ligand","type":"narrow"}],"termid":"GO:0031710"}


id: GO:0060487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell that contributes to the epithelium of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"lung cell differentiation","termid":"GO:0060479"},{"relation_name":"part_of","term_name":"lung epithelium development","termid":"GO:0060428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung epithelial cell differentiation","synonyms":[{"name":"pulmonary epithelial cell differentiation","type":"related"}],"termid":"GO:0060487"}


id: MONDO:1010597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperthyroidism that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism, non-human animal","termid":"MONDO:1010055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism, rabbit","secondary_identifiers":["OMIA:000511-9986"],"termid":"MONDO:1010597","xrefs":{"Monarch":{"xref_id":"1010597"}}}


id: PBO:0042663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 19","termid":"PBO:0042663"}


id: MONDO:0006513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of breast cancer that is estrogen-receptor negative","definition_xrefs":["EFO:1000650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"estrogen-receptor negative breast cancer","secondary_identifiers":["DOID:0060076"],"synonyms":[{"name":"ER- breast cancer","type":"exact"}],"termid":"MONDO:0006513","xrefs":{"Monarch":{"xref_id":"0006513"}}}


id: MONDO:0004540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of malignant peripheral nerve sheath tumor composed predominantly or exclusively of epithelioid cells.","definition_xrefs":["NCIT:C6561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant peripheral nerve sheath tumor","termid":"MONDO:0017827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelioid malignant peripheral nerve sheath tumor","secondary_identifiers":["MEDGEN:272104","DOID:8353","SCTID:404038007","UMLS:C1321427"],"synonyms":[{"name":"epithelioid MPNST","type":"exact"},{"name":"epithelioid malignant peripheral nerve sheath tumor","type":"exact"},{"name":"malignant epithelioid neoplasm of peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid neoplasm of the peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid peripheral nerve sheath neoplasm","type":"exact"},{"name":"malignant epithelioid peripheral nerve sheath tumor","type":"exact"},{"name":"malignant epithelioid peripheral nerve sheath tumour","type":"exact"},{"name":"malignant epithelioid tumor of peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid tumor of the peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid tumour of peripheral nerve sheath","type":"exact"},{"name":"malignant epithelioid tumour of the peripheral nerve sheath","type":"exact"}],"termid":"MONDO:0004540","xrefs":{"Monarch":{"xref_id":"0004540"}}}


id: PBO:0051669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted formin 2","termid":"PBO:0051669"}


id: MOD:00593
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"covalent modification of lysine by omega-maleimido alkanoyl N-hydroxysuccinimido esters","synonyms":[{"name":"Xlink:SSD","type":"related"},{"name":"covalent modification of lysine by cross-linking reagent","type":"related"}],"termid":"MOD:00593"}


id: PBO:0049062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR75-ASB3 readthrough","termid":"PBO:0049062"}


id: PBO:0077804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 2","termid":"PBO:0077804"}


id: PBO:0090749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain-like containing protein, implicated in vesicle formation/trafficking","termid":"PBO:0090749"}


id: GO:0014707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure. The branchiomeric muscle is derived from cranial mesoderm and controls facial expression, pharyngeal and laryngeal function, operating the jaw. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. Branchiomeric muscles of mammals correspond to the gill musculature of fish.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"},{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}


id: PBO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 8","termid":"PBO:0044439"}


id: PBO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation","termid":"PBO:0031231"}


id: PBO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal fragment of Rec8 generated by separase-mediated cleavage is an endogenous substrate of the N-end rule pathway","termid":"PBO:0015687"}


id: MONDO:0044232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fingers, relative length of (obsolete MONDO:0044232)","secondary_identifiers":["OMIM:136100"],"synonyms":[{"name":"2D:4D finger-length ratio","type":"related"},{"name":"fingers, relative length OF","type":"related"}],"termid":"MONDO:0044232","xrefs":{"Monarch":{"xref_id":"0044232"}}}


id: PBO:0024834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta Glucan Synthase","termid":"PBO:0024834"}


id: GO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a host organism stops, prevents, or reduces the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"},{"relation_name":"negatively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral transcription","synonyms":[{"name":"negative regulation of viral transcription by host","type":"exact"}],"termid":"GO:0043922"}


id: MONDO:0100588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital disorder of glycosylation in which the cause of the disease is a mutation in FAM20B.","definition_xrefs":["PMID:30847897","PMID:37298583","PMID:38653092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"FAM20B-congenital disorder of glycosylation","synonyms":[{"name":"FAM20B-CDG","type":"exact"},{"name":"FAM20B-congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100588","xrefs":{"Monarch":{"xref_id":"0100588"}}}


id: PBO:0071132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 134","termid":"PBO:0071132"}


id: MONDO:0017277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 12 disorder","termid":"MONDO:0700019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 12","secondary_identifiers":["UMLS:C5680422","GARD:21115","Orphanet:282124","MEDGEN:1826080"],"synonyms":[{"name":"partial deletion of chromosome type 12","type":"exact"},{"name":"partial monosomy of chromosome 12","type":"exact"}],"termid":"MONDO:0017277","xrefs":{"Monarch":{"xref_id":"0017277"}}}


id: PBO:0113043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-associated high mobility group (HMG) family member; role in compacting, bending, bridging and looping DNA; lysine-rich CTD is essential for chromatin assembly, forming condensates with dsDNA; functionally similar to linker histone H1; rDNA-binding component regulates transcription from RNAPI promoters; regulates start site selection of ribosomal protein genes via RNAPII promoters; role in genome maintenance; associates with a 5'-3' DNA helicase and Fpr1p","termid":"PBO:0113043"}


id: PBO:0046005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1B antisense RNA 1","termid":"PBO:0046005"}


id: PBO:0027729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_mitochondrion","termid":"PBO:0027729"}


id: PBO:0089084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein O-mannosyltransferase Ogm4","termid":"PBO:0089084"}


id: PBO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence","termid":"PBO:0000041"}


id: PBO:0038347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-creates_habitat_for","termid":"PBO:0038347"}


id: MONDO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete la Crosse encephalitis (obsolete MONDO:0000246)","termid":"MONDO:0000246","xrefs":{"Monarch":{"xref_id":"0000246"}}}


id: GO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of heavy chain immunoglobulin and T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the immune receptor gene.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"}


id: PBO:0066575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras homolog, mTORC1 binding","termid":"PBO:0066575"}


id: MONDO:0003679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anteroseptal myocardial infarction","secondary_identifiers":["MEDGEN:78087","DOID:5855","MESH:D056988","UMLS:C0262565"],"termid":"MONDO:0003679","xrefs":{"Monarch":{"xref_id":"0003679"}}}


id: PBO:0090939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L10","termid":"PBO:0090939"}


id: PBO:0035778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_prometaphase","termid":"PBO:0035778"}


id: PBO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-independent_of","termid":"PBO:0006181"}


id: PBO:0047041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member B","termid":"PBO:0047041"}


id: PBO:0086996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag","termid":"PBO:0086996"}


id: PBO:0003584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pof6 interacting protein Sip1, predicted AP-1 accessory protein","termid":"PBO:0003584"}


id: PBO:0071612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 30","termid":"PBO:0071612"}


id: GO:0000398
data:
  {"annotated_genes":["SJAG_05235","SJAG_02862","SJAG_00498","SJAG_01810","SJAG_02905","SJAG_04071","SJAG_01547","SJAG_01511","SJAG_01144","SJAG_00531","SJAG_01819","SJAG_05211","SJAG_03995","SJAG_01169","SJAG_05195","SJAG_03547","SJAG_04318","SJAG_02227","SJAG_05224","SJAG_05009","SJAG_03849","SJAG_03238","SJAG_02560","SJAG_01064","SJAG_03993","SJAG_01958","SJAG_16453","SJAG_04782","SJAG_04538","SJAG_01301","SJAG_05349","SJAG_04783","SJAG_01629","SJAG_04117","SJAG_02722","SJAG_03214","SJAG_03601","SJAG_02772","SJAG_03460","SJAG_05025","SJAG_04163","SJAG_01214","SJAG_04529","SJAG_01408","SJAG_03070","SJAG_01327","SJAG_03687","SJAG_02185","SJAG_05231","SJAG_04949","SJAG_02083","SJAG_05212","SJAG_03430","SJAG_03323","SJAG_04433","SJAG_02317","SJAG_04230","SJAG_02843","SJAG_02844","SJAG_00998","SJAG_01200","SJAG_02686","SJAG_00571","SJAG_00996","SJAG_03427","SJAG_03469","SJAG_01015","SJAG_01504","SJAG_00083","SJAG_00859","SJAG_02279","SJAG_00577","SJAG_01308","SJAG_00363","SJAG_00639","SJAG_00278","SJAG_03983","SJAG_02018","SJAG_00888","SJAG_00076","SJAG_01654","SJAG_02879","SJAG_00504","SJAG_03369","SJAG_04898","SJAG_04405","SJAG_03210","SJAG_03498","SJAG_01433","SJAG_01557","SJAG_03291","SJAG_03937","SJAG_01634","SJAG_00414","SJAG_02573","SJAG_04222","SJAG_00147","SJAG_00313","SJAG_04911","SJAG_02304","SJAG_01799","SJAG_01761","SJAG_02558","SJAG_03301","SJAG_04214","SJAG_05240","SJAG_03711","SJAG_04079","SJAG_00322","SJAG_03112","SJAG_04497","SJAG_03410","SJAG_03954","SJAG_01008","SJAG_02687","SJAG_02295","SJAG_02058","SJAG_00249","SJAG_03890","SJAG_01315","SJAG_01217","SJAG_00597","SJAG_01852","SJAG_04293","SJAG_00809","SJAG_00225","SJAG_03245","SJAG_00989","SJAG_03279","SJAG_05208","SJAG_00539","SJAG_01452","SJAG_00911","SJAG_04914","SJAG_01152","SJAG_05276","SJAG_01870","SJAG_00206","SJAG_02469","SJAG_05926","SJAG_03966","SJAG_04589","SJAG_02688","SJAG_01919","SJAG_04694","SJAG_00058","SJAG_00474","SJAG_00818","SJAG_02078","SJAG_03894","SJAG_00643","SJAG_02915","SJAG_02396","SJAG_01040","SJAG_04025","SJAG_04863","SJAG_00094","SJAG_02455","SJAG_00446","SJAG_01440"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110056,98227,81426,97732,93876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000380"},{"annotations":[119678],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[58394,79660,107580],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000349"},{"annotations":[74820,111371,106656,79029],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000350"},{"annotations":[74821,103039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000389"},{"annotations":[112469,95776,111892,93340,96709,81097,97386,99617,104508,112455,114203,107684,96966,115114,117086,104346],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[120586],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000348"},{"annotations":[77639,111609,118874,74910,76322,77214,67898,112340,77389,120763,89192,59459,79263,69383,108576,104210,118723,60256,110690,120417,73493,77767,78317,72457,106316,97761,59538,115298,68880,109457,98621,95359,72091,79518,104504,109701,72837,76225,106477,75156,76736,81682,73737,57749,90761,79347,93924,93877,96972,116199,58392,113116,104822,81521,94888,79063,68728,74474,75825,75981,81058,98228,66373,97996,72119,96509,65458,75876,105005,97120,79661,80592,77668,82017,78095,78543,62886,75791,97578,94461,65031,73753,73483,90288,76317,97733,73315,80016,77432,80079,116702,65425,77164,81053,79057,115682,116205,104272,106762,119069,114493,74564,81038,102421,93576,99459,65608,119825,76779,75762,78773,93193,57128,115006,99179,94663,77195,94440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045292"},{"annotations":[78980,75942],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006376"},{"annotations":[120279,91249],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905746"},{"annotations":[77009,75707,93932,112755],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0048026"},{"annotations":[107293,66100,113363,114905,94664],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0000381"},{"annotations":[100350],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905744"},{"annotations":[95518],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0048024"},{"annotations":[107294,80620,95148,73736,75585,77820,73887,103537,77491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000245"},{"annotations":[89545,76581,57308,64545,80356],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000390"},{"annotations":[65463],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000393"},{"annotations":[66319,77380,91250,98622,110805,63141,74368,81015,97762,116958,106354,115115,73393,78808],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000387"},{"annotations":[79346,107295,64120,77732,108363,74261,114084,116229],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000244"},{"annotations":[102423],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000388"},{"annotations":[114286,115692,108577],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.","definition_xrefs":["ISBN:0879695897","ISBN:0198506732","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","termid":"GO:0000377"},{"relation_name":"is_a","term_name":"mRNA 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splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0006374","Reactome:R-HSA-72163","Reactome:R-HSA-72165","GO:0006375"],"synonyms":[{"name":"mRNA splicing","type":"broad"},{"name":"nuclear mRNA splicing via U12-type spliceosome","type":"narrow"},{"name":"nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"pre-mRNA splicing","type":"broad"},{"name":"splicing AT-AC intron","type":"related"},{"name":"splicing GT-AG intron","type":"related"}],"termid":"GO:0000398","terms_by_termid":{"GO:0000244":null,"GO:0000245":null,"GO:0000348":null,"GO:0000349":null,"GO:0000350":null,"GO:0000354":null,"GO:0000380":null,"GO:0000381":null,"GO:0000387":null,"GO:0000388":null,"GO:0000389":null,"GO:0000390":null,"GO:0000393":null,"GO:0000395":null,"GO:0006376":null,"GO:0045292":null,"GO:0048024":null,"GO:0048026":null,"GO:1903241":null,"GO:1905744":null,"GO:1905746":null}}


id: MONDO:0001202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostatic cyst","secondary_identifiers":["DOID:11133","ICD10CM:N42.83","ICD9:600.3","SCTID:409658007","UMLS:C1443972","MEDGEN:731233","ICD9:599.89"],"synonyms":[{"name":"cyst of prostate","type":"exact"}],"termid":"MONDO:0001202","xrefs":{"Monarch":{"xref_id":"0001202"}}}


id: GO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"positively_regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte activation","synonyms":[{"name":"activation of lymphocyte activation","type":"narrow"},{"name":"stimulation of lymphocyte activation","type":"narrow"},{"name":"up regulation of lymphocyte activation","type":"exact"},{"name":"up-regulation of lymphocyte activation","type":"exact"},{"name":"upregulation of lymphocyte activation","type":"exact"}],"termid":"GO:0051251"}


id: MONDO:0005855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common, benign, usually self-limited viral infection of the skin and occasionally the conjunctivae by a poxvirus (molluscum contagiosum virus). (Dorland, 27th ed)","definition_xrefs":["MESH:D008976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molluscum contagiosum","secondary_identifiers":["DOID:8867","ICD9:078.0","SCTID:40070004","UMLS:C0026393","MEDGEN:10081","ICD10CM:B08.1","icd11.foundation:82201615","EFO:0007375"],"termid":"MONDO:0005855","xrefs":{"Monarch":{"xref_id":"0005855"}}}


id: PBO:0087228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Secreted alpha-galactosidase; required for catabolic conversion of melibiose to glucose and galactose; regulated by several GAL genes","termid":"PBO:0087228"}


id: GO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the centromeric region is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion, centromeric","termid":"GO:0071962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:0071960"}


id: GO:1904070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ascaroside.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000068","PMID:25775534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"ascaroside metabolic process","termid":"GO:1904069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascaroside biosynthetic process","synonyms":[{"name":"ascaroside anabolism","type":"exact"},{"name":"ascaroside biosynthesis","type":"exact"},{"name":"ascaroside formation","type":"exact"},{"name":"ascaroside synthesis","type":"exact"}],"termid":"GO:1904070"}


id: MONDO:0016278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Carcinosarcoma of the cervix uteri is a rare, malignant, mixed epithelial and mesenchymal tumor, located in the cervix uteri, composed of an admixture of carcinomatous and sarcomatous elements. It usually presents with abnormal vaginal bleeding and a round, well-defined, gray to yellowish-white, pedunculated polypoid mass protruding through the cervical canal. Association with HPV infection (especially serotype 16) has been frequently reported.","definition_xrefs":["Orphanet:213787"],"gene_count":0,"genotype_count":0,"name":"obsolete carcinosarcoma of the cervix uteri (obsolete MONDO:0016278)","termid":"MONDO:0016278","xrefs":{"Monarch":{"xref_id":"0016278"}}}


id: GO:0006094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.","definition_xrefs":["MetaCyc:GLUCONEO-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gluconeogenesis","secondary_identifiers":["Reactome:R-HSA-70263","Wikipedia:Gluconeogenesis"],"synonyms":[{"name":"glucose biosynthesis","type":"exact"},{"name":"glucose biosynthetic process","type":"exact"}],"termid":"GO:0006094"}


id: MONDO:1012613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal cobalamin (vitamin B12) malabsorption that occurs in dogs due to a mutation in the AMN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"intestinal cobalamin (vitamin B12) malabsorption, dog","termid":"MONDO:1012451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intestinal cobalamin (vitamin B12) malabsorption, AMN-related, dog","secondary_identifiers":["OMIA:000565-9615"],"termid":"MONDO:1012613","xrefs":{"Monarch":{"xref_id":"1012613"}}}


id: GO:0051484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway that contributes to terpenoid biosynthesis. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0019288"},{"relation_name":"part_of","term_name":"terpenoid biosynthetic process, mevalonate-independent","termid":"GO:0051483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate-independent pathway, during terpenoid anabolism","type":"related"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway involved in terpenoid biosynthetic process","type":"related"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, during terpenoid biosynthetic process","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway, during terpenoid biosynthesis","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway, during terpenoid formation","type":"related"},{"name":"isopentenyl diphosphate synthesis, mevalonate-independent pathway, during terpenoid synthesis","type":"related"}],"termid":"GO:0051484"}


id: GO:0009654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ).","definition_xrefs":["InterPro:IPR002683","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"photosystem II","termid":"GO:0009523"},{"relation_name":"part_of","term_name":"thylakoid membrane","termid":"GO:0042651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem II oxygen evolving complex","secondary_identifiers":["Wikipedia:Oxygen_evolving_complex"],"synonyms":[{"name":"OEC (PSII) complex","type":"exact"},{"name":"oxygen evolving complex","type":"exact"}],"termid":"GO:0009654"}


id: MONDO:0002966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prolymphocytic leukemia that involves the spleen.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolymphocytic leukemia","termid":"MONDO:0001023"},{"relation_name":"is_a","term_name":"splenic manifestation of leukemia","termid":"MONDO:0004107"},{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"splenic manifestation of prolymphocytic leukemia","secondary_identifiers":["DOID:4334","MEDGEN:277663","NCIT:C7297","UMLS:C1336066"],"synonyms":[{"name":"prolymphocytic leukaemia of spleen","type":"exact"},{"name":"prolymphocytic leukemia of spleen","type":"exact"},{"name":"spleen prolymphocytic leukaemia","type":"exact"},{"name":"spleen prolymphocytic leukemia","type":"exact"},{"name":"splenic manifestation of prolymphocytic leukemia","type":"exact"}],"termid":"MONDO:0002966","xrefs":{"Monarch":{"xref_id":"0002966"}}}


id: PBO:0054004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1332","termid":"PBO:0054004"}


id: GO:0046905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate = 15-cis-phytoene + 2 diphosphate.","definition_xrefs":["PMID:12641468","RHEA:34475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"15-cis-phytoene synthase activity","secondary_identifiers":["MetaCyc:RXN-13323","EC:2.5.1.32"],"synonyms":[{"name":"PSase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate geranylgeranyltransferase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate:geranylgeranyl-diphosphate geranylgeranyltransferase (15-cis-phytoene-forming) activity","type":"exact"},{"name":"phytoene synthase activity","type":"exact"},{"name":"prephytoene-diphosphate synthase activity","type":"exact"}],"termid":"GO:0046905"}


id: MONDO:0013490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephalic leukoencephalopathy with subcortical cysts","termid":"MONDO:0011391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 2A","secondary_identifiers":["UMLS:C3151355","MEDGEN:462705","DOID:0080318","GARD:15728","OMIM:613925"],"synonyms":[{"name":"MLC2A","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 2A","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts type 2A","type":"exact"}],"termid":"MONDO:0013490","xrefs":{"Monarch":{"xref_id":"0013490"}}}


id: GO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactose from one side of a membrane to the other. Lactose is a disaccharide 4-O-beta-D-galactopyranosyl-D-glucose, and constitutes roughly 5% of the milk in almost all mammals.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"lactose transmembrane transporter activity","secondary_identifiers":["GO:0019189"],"synonyms":[{"name":"lactose permease activity","type":"exact"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"}],"termid":"GO:0015155"}


id: PR:O13838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup40 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19E9.01c","synonyms":[{"name":"Spom972h-nup40","type":"exact"},{"name":"nuclear pore protein nup40 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13838"}


id: SO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing both box C/D and box H/ACA sequence motifs, guiding both the methylation and pseudouridylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-D_H_ACA_box_scaRNA","synonyms":[{"name":"C/D-H/ACA scaRNA","type":"exact"}],"termid":"SO:0002371"}


id: PBO:0081790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 718","termid":"PBO:0081790"}


id: MONDO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the rectum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C5547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neuroendocrine tumor G1","termid":"MONDO:0006162"},{"relation_name":"is_a","term_name":"rectal neuroendocrine tumor","termid":"MONDO:0015068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:233389","SCTID:713306000","UMLS:C1335678"],"synonyms":[{"name":"carcinoid of rectum","type":"exact"},{"name":"carcinoid of the rectum","type":"exact"},{"name":"carcinoid tumor of rectum","type":"exact"},{"name":"carcinoid tumor of the rectum","type":"exact"},{"name":"carcinoid tumour of rectum","type":"exact"},{"name":"carcinoid tumour of the rectum","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of rectum","type":"exact"},{"name":"rectal NET G1","type":"exact"},{"name":"rectal carcinoid","type":"exact"},{"name":"rectal carcinoid tumor","type":"exact"},{"name":"rectal carcinoid tumour","type":"exact"},{"name":"rectal neuroendocrine tumor G1","type":"exact"},{"name":"rectum NET G1","type":"exact"},{"name":"rectum carcinoid tumor","type":"exact"},{"name":"rectum carcinoid tumor (disease)","type":"exact"},{"name":"rectum carcinoid tumour","type":"exact"},{"name":"rectum carcinoid tumour (disease)","type":"exact"},{"name":"rectum neuroendocrine neoplasm G1","type":"exact"},{"name":"rectum neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0021534","xrefs":{"Monarch":{"xref_id":"0021534"}}}


id: MONDO:0019245
data:
  {"annotated_genes":["SJAG_04790","SJAG_00158","SJAG_02949","SJAG_02056","SJAG_00570","SJAG_01407","SJAG_02716","SJAG_02518","SJAG_03052","SJAG_04323","SJAG_02068"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88174,88175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[87069,87068,87070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[86728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[88347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010526"},{"annotations":[87568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009744"},{"annotations":[87579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[88674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[87943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[87936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[87325,87326,87327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder in which harmful amounts of lipids accumulate in cells and tissues. Because of a functionally impaired hydrolase or auxiliary protein, their lipid substrates cannot be degraded, accumulate in the lysosome, and slowly spread to other intracellular membranes.","definition_xrefs":["PMID:21502308","Wikipedia:Lipid_storage_disorder"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00570":null,"SJAG_01407":null,"SJAG_02056":null,"SJAG_02068":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02949":null,"SJAG_03052":null,"SJAG_04323":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0002525"],"is_obsolete":false,"name":"lysosomal lipid storage disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:272.8","ICD9:272.7","GARD:12511","DOID:9455","MESH:D008064","MEDGEN:9780","Orphanet:79204","UMLS:C0023794","SCTID:10741005"],"synonyms":[{"name":"inborn error of lipid storage","type":"exact"},{"name":"inborn lipid storage disorder","type":"exact"},{"name":"lipid storage disease","type":"exact"},{"name":"lipidoses","type":"related"},{"name":"lipidosis","type":"related"},{"name":"lipoid storage diseas","type":"exact"},{"name":"lipoid storage disease","type":"exact"},{"name":"lipoid storage disorder","type":"exact"},{"name":"lipoidoses","type":"related"},{"name":"lipoidosis","type":"related"},{"name":"rare inborn error of lipid storage","type":"exact"}],"termid":"MONDO:0019245","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null,"MONDO:0009744":null,"MONDO:0009756":null,"MONDO:0010155":null,"MONDO:0010526":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0019245"}}}


id: GO:0006802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes involved in the induction or activation of catalase, an enzyme that catalyzes the conversion of H2O2 into H2O.","definition_xrefs":["GOC:jl","PMID:11245904"],"gene_count":0,"genotype_count":0,"name":"obsolete catalase reaction (obsolete GO:0006802)","synonyms":[{"name":"catalase reaction","type":"exact"},{"name":"hydroperoxidase reaction","type":"related"}],"termid":"GO:0006802"}


id: PBO:0072297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 15","termid":"PBO:0072297"}


id: PBO:0064420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partner of NOB1 homolog","termid":"PBO:0064420"}


id: PBO:0018170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent DNA helicase Rhp26","termid":"PBO:0018170"}


id: MONDO:0019702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"neonatal osteosclerotic dysplasia","secondary_identifiers":["GARD:19199","MEDGEN:721998","Orphanet:93443","UMLS:C1300205","SCTID:389236000"],"termid":"MONDO:0019702","xrefs":{"Monarch":{"xref_id":"0019702"}}}


id: MONDO:0017873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ebola hemorrhagic fever (obsolete MONDO:0017873)","termid":"MONDO:0017873","xrefs":{"Monarch":{"xref_id":"0017873"}}}


id: FYPO:0004873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 2-oxoglutarate-dependent dioxygenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal 2-oxoglutarate dioxygenase activity","termid":"FYPO:0004871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased 2-oxoglutarate dioxygenase activity","synonyms":[{"name":"decreased 2-oxoglutarate-dependent dioxygenase activity","type":"exact"},{"name":"decreased oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","type":"exact"},{"name":"reduced 2-oxoglutarate dioxygenase activity","type":"exact"}],"termid":"FYPO:0004873"}


id: PBO:0110353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4B-CDC7 kinase regulatory subunit","termid":"PBO:0110353"}


id: PBO:0055916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A4, pseudogene","termid":"PBO:0055916"}


id: GO:0048497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators","PMID:9090883","GOC:PO_curators","PO:0025395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of plant organ identity","termid":"GO:0090700"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of floral organ identity","termid":"GO:0048497"}


id: PBO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Berardinelli-Seip congenital lipodystrophy type 2, Silver spastic paraplegia syndrome, distal hereditary motor neuropathy type V","termid":"PBO:0002067"}


id: PBO:0088735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf4","termid":"PBO:0088735"}


id: MONDO:0011056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"Wilms tumor 4","secondary_identifiers":["MESH:C563336","OMIM:601363","GARD:15328","MEDGEN:318623","UMLS:C1832426"],"synonyms":[{"name":"WT4","type":"related"},{"name":"Wilms tumor 4","type":"exact"},{"name":"Wilms tumor type 4","type":"exact"},{"name":"Wilms tumor, type 4","type":"exact"},{"name":"Wilms tumour type 4","type":"exact"},{"name":"familial Wilms tumor 1","type":"related"},{"name":"familial Wilms tumour 1","type":"related"}],"termid":"MONDO:0011056","xrefs":{"Monarch":{"xref_id":"0011056"}}}


id: MONDO:0012803
data:
  {"annotated_genes":["SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87918],"is_not":false,"summary":null,"term":"MONDO:0012803"}]},"cv_name":"mondo","definition":"This syndrome is characterized by diarrhea and vomiting after ingestion of trehalose, a disaccharide found mainly in mushrooms.","definition_xrefs":["Orphanet:103909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"diarrhea-vomiting due to trehalase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:271.8","SCTID:84193000","GARD:10372","UMLS:C0268187","icd11.foundation:2025219157","MEDGEN:75660","MESH:C562603","OMIM:612119"],"synonyms":[{"name":"isolated trehalose intolerance","type":"exact"},{"name":"trehalase deficiency","type":"related"},{"name":"trehalose intolerance","type":"related"}],"termid":"MONDO:0012803","terms_by_termid":{"MONDO:0012803":null},"xrefs":{"Monarch":{"xref_id":"0012803"}}}


id: PBO:0063742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 7","termid":"PBO:0063742"}


id: GO:0035165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an embryonic mesoderm-derived hemocyte precursor cell acquires the specialized features of a crystal cell. Crystal cells are a class of cells that contain crystalline inclusions and are involved in the melanization of pathogenic material in the hemolymph.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic hemocyte differentiation","termid":"GO:0035163"},{"relation_name":"is_a","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic crystal cell differentiation","termid":"GO:0035165"}


id: PBO:0082680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; ESCRT-I is involved in ubiquitin-dependent sorting of proteins into the endosome; suppressor of rna1-1 mutation; may be involved in RNA export from nucleus","termid":"PBO:0082680"}


id: MONDO:0025167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of pathologic syndromes found in avian species caused by reticuloendotheliosis virus. The distinct syndromes include non-neoplastic runting, acute neoplastic disease, and chronic neoplastic disease. Humans and mammals appear resistant.","definition_xrefs":["MESH:D055761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticuloendotheliosis, avian","synonyms":[{"name":"Avian Reticuloendothelioses","type":"related"},{"name":"Avian reticuloendotheliosis","type":"related"},{"name":"Reticuloendothelioses, Avian","type":"related"}],"termid":"MONDO:0025167","xrefs":{"Monarch":{"xref_id":"0025167"}}}


id: PBO:0071832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 27","termid":"PBO:0071832"}


id: GO:0018740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-hydroxybiphenyl-2-sulfinate + H2O = biphenyl-2-ol + sulfite.","definition_xrefs":["EC:3.13.1.3","RHEA:12945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-sulfur bonds","termid":"GO:0046508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2'-hydroxybiphenyl-2-sulfinate desulfinase activity","secondary_identifiers":["KEGG_REACTION:R07311","MetaCyc:RXN-624","UM-BBD_enzymeID:r0236"],"synonyms":[{"name":"2'-hydroxybiphenyl-2-sulfinate sulfinolyase activity","type":"exact"},{"name":"2'-hydroxybiphenyl-2-sulfinate sulfohydrolase activity","type":"related"},{"name":"2-(2'-hydroxyphenyl)benzenesulfinate desulfinase activity","type":"related"},{"name":"2-(2-hydroxyphenyl) benzenesulfinate sulfohydrolase activity","type":"related"},{"name":"2-(2-hydroxyphenyl) benzenesulfinate:H2O hydrolase activity","type":"related"},{"name":"2-(2-hydroxyphenyl)benzenesulfinate desulfinase activity","type":"related"},{"name":"2-(2-hydroxyphenyl)benzenesulfinate hydrolase activity","type":"related"},{"name":"2-(2-hydroxyphenyl)benzenesulphinate hydrolase activity","type":"exact"},{"name":"DszB","type":"related"},{"name":"HBPSi desulfinase activity","type":"related"},{"name":"HPBS desulfinase activity","type":"related"},{"name":"dibenzothiophene desulfurization enzyme B","type":"related"},{"name":"gene dszB-encoded hydrolase activity","type":"related"}],"termid":"GO:0018740"}


id: GO:0045611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"negatively_regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemocyte differentiation","synonyms":[{"name":"down regulation of hemocyte differentiation","type":"exact"},{"name":"down-regulation of hemocyte differentiation","type":"exact"},{"name":"downregulation of hemocyte differentiation","type":"exact"},{"name":"inhibition of hemocyte differentiation","type":"narrow"},{"name":"negative regulation of arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0045611"}


id: GO:1990565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase chaperone complex required for the proper folding, maturation and stabilization of target proteins (mostly signaling protein kinases, some steroid hormone receptors), usually during or immediately after completion of translation. The highly conserved, phosphorylated CDC37-Ser13 (vertebrates) or cdc37-Ser14 (yeast) is essential for complex assembly and target protein binding. CDC37-Ser13 (Ser14) is phosphorylated by Casein kinase II (CK2), which in turn is a target of CDC37 creating a positive feedback loop. Complex binding also prevents rapid ubiquitin-dependent proteosomal degradation of target proteins.","definition_xrefs":["PMID:22939624","GOC:PARL","GOC:bhm","PMID:21855797","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"HSP90-CDC37 chaperone complex","termid":"GO:1990565"}


id: PBO:0065175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 1","termid":"PBO:0065175"}


id: PBO:0088788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rok1","termid":"PBO:0088788"}


id: MONDO:0027069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 5 (ATP synthase) deficiency, mitochondrial type 1","secondary_identifiers":["UMLS:C3275684","OMIM:500015","MEDGEN:477315","DOID:0111748"],"synonyms":[{"name":"MC5DM1","type":"exact"},{"name":"mitochondrial complex V (ATP synthase) deficiency, mitochondrial type 1","type":"exact"}],"termid":"MONDO:0027069","xrefs":{"Monarch":{"xref_id":"0027069"}}}


id: MONDO:1012031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital blindness, non-human animal","termid":"MONDO:1011975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital blindness, pig","secondary_identifiers":["OMIA:000115-9823"],"termid":"MONDO:1012031","xrefs":{"Monarch":{"xref_id":"1012031"}}}


id: MONDO:1011077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Rhesus monkey","secondary_identifiers":["OMIA:001033-9544"],"termid":"MONDO:1011077","xrefs":{"Monarch":{"xref_id":"1011077"}}}


id: MONDO:0009420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by primary hypergonadotropic hypogonadism and partial alopecia.","definition_xrefs":["Orphanet:2232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypergonadotropic hypogonadism-partial alopecia syndrome","secondary_identifiers":["OMIM:241090","SCTID:719275009","UMLS:C2673480","MEDGEN:388650","ICD10CM:E28.3","GARD:16588","MESH:C567109"],"synonyms":[{"name":"Al Awadi-Farag-Teebi syndrome","type":"exact"},{"name":"hypergonadotropic hypogonadism and partial alopecia","type":"related"}],"termid":"MONDO:0009420","xrefs":{"Monarch":{"xref_id":"0009420"}}}


id: MONDO:0006684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Increased intracellular or extracellular fluid in brain tissue. Cytotoxic brain edema (swelling due to increased intracellular fluid) is indicative of a disturbance in cell metabolism, and is commonly associated with hypoxic or ischemic injuries (see hypoxia, brain). An increase in extracellular fluid may be caused by increased brain capillary permeability (vasogenic edema), an osmotic gradient, local blockages in interstitial fluid pathways, or by obstruction of csf flow (e.g., obstructive hydrocephalus). (From Childs Nerv Syst 1992 Sep; 8(6):301-6)","definition_xrefs":["MESH:D001929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain edema","secondary_identifiers":["MedDRA:10006121","ICD9:348.5","EFO:1000845","DOID:4724","MEDGEN:2337","SCTID:2032001","UMLS:C0006114"],"synonyms":[{"name":"intracranial swelling","type":"exact"},{"name":"wet brain","type":"exact"}],"termid":"MONDO:0006684","xrefs":{"Monarch":{"xref_id":"0006684"}}}


id: GO:0033349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving apiose, the branched tetrose 3-C-(hydroxymethyl)-D-glycero-tetrose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrose metabolic process","termid":"GO:0033347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"apiose metabolic process","synonyms":[{"name":"apiose metabolism","type":"exact"}],"termid":"GO:0033349"}


id: FYPO:0009088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of magnesium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of magnesium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to magnesium chloride and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to magnesium chloride and SDS","type":"exact"},{"name":"hypersensitive to magnesium chloride and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to magnesium chloride and SDS","type":"exact"},{"name":"sensitive to magnesium chloride and SDS during vegetative growth","type":"exact"},{"name":"sensitive to magnesium chloride and SDS in combination","type":"exact"},{"name":"sensitive to magnesium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to magnesium chloride and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009088"}


id: MONDO:0014820
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87564],"is_not":false,"summary":null,"term":"MONDO:0014820"}]},"cv_name":"mondo","definition":"Any mitochondrial DNA depletion syndrome in which the cause of the disease is a mutation in the OPA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080336","UMLS:C4225163","OMIM:616896","MEDGEN:903789"],"synonyms":[{"name":"MTDPS14","type":"exact"},{"name":"OPA1 mitochondrial DNA depletion syndrome","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type); MTDPS14","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (encephalocardiomyopathic type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in OPA1","type":"exact"}],"termid":"MONDO:0014820","terms_by_termid":{"MONDO:0014820":null},"xrefs":{"Monarch":{"xref_id":"0014820"}}}


id: PBO:0070003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1299, pseudogene","termid":"PBO:0070003"}


id: PBO:0079540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 1","termid":"PBO:0079540"}


id: PBO:0065007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 11","termid":"PBO:0065007"}


id: PATO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source.","definition_xrefs":["web:www.thefreedictionary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescent","termid":"PATO:0001290"}


id: FYPO:0006465
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature non-coding RNA (ncRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"altered mature ncRNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal ncRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature ncRNA level during vegetative growth","type":"exact"},{"name":"altered mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature ncRNA transcript level during vegetative growth","type":"exact"},{"name":"altered mature non-coding RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006465","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: PBO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDRF1 divergent transcript","termid":"PBO:0045805"}


id: GO:0009931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; and ATP + a protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0140096","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine kinase activity","termid":"GO:0009931"}


id: MONDO:0019461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of prolymphocytes affecting the blood, bone marrow, and spleen. It is characterized by prolymphocytes exceeding 55% of the lymphoid cells in the blood and profound splenomegaly.","definition_xrefs":["MESH:D054403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolymphocytic leukemia","termid":"MONDO:0001023"},{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"},{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell prolymphocytic leukemia","secondary_identifiers":["ONCOTREE:BPLL","UMLS:C0475801","DOID:0081041","GARD:8223","icd11.foundation:1997215876","Orphanet:86852","MEDGEN:105396","SCTID:277619001","EFO:1000102","ICDO:9833/3","NCIT:C4753"],"synonyms":[{"name":"B prolymphocytic leukaemia","type":"exact"},{"name":"B prolymphocytic leukemia","type":"exact"},{"name":"B-PLL","type":"exact"},{"name":"B-cell prolymphocytic leukemia","type":"exact"},{"name":"BPLL","type":"related"}],"termid":"MONDO:0019461","xrefs":{"Monarch":{"xref_id":"0019461"}}}


id: GO:0004475
data:
  {"annotated_genes":["SJAG_03188","SJAG_00890"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77109,104887],"is_not":false,"summary":null,"term":"GO:0004475"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-mannose 1-phosphate + GTP = diphosphate + GDP-alpha-D-mannose.","definition_xrefs":["RHEA:15229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"mannose-1-phosphate guanylyltransferase (GTP) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446221","EC:2.7.7.13","MetaCyc:2.7.7.13-RXN","KEGG_REACTION:R00885"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase activity","type":"related"},{"name":"GTP-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:alpha-D-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GTP:mannose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"PIM-GMP (phosphomannose isomerase-guanosine 5'-diphospho-D-mannose pyrophosphorylase)","type":"related"},{"name":"guanosine 5'-diphospho-D-mannose pyrophosphorylase activity","type":"related"},{"name":"guanosine diphosphomannose pyrophosphorylase activity","type":"related"},{"name":"guanosine triphosphate-mannose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"mannose 1-phosphate guanylyltransferase (guanosine triphosphate)","type":"related"},{"name":"mannose-1-phosphate guanylyltransferase activity","type":"broad"}],"termid":"GO:0004475","terms_by_termid":{"GO:0004475":null}}


id: GO:0034867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpent-2-enoyl-CoA + H2O = 2,4,4-trimethyl-3-hydroxypentanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpent-2-enoyl-CoA hydratase activity (obsolete GO:0034867)","termid":"GO:0034867"}


id: MONDO:0020376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset zonular cataract","termid":"MONDO:0020379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset nuclear cataract","secondary_identifiers":["MedDRA:10057735","MEDGEN:1842550","MESH:C563333","Orphanet:98991","GARD:16887","MedDRA:10007759","UMLS:C5681644"],"termid":"MONDO:0020376","xrefs":{"Monarch":{"xref_id":"0020376"}}}


id: GO:1905790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mechanosensory behavior.","definition_xrefs":["GOC:TermGenie","PMID:8692859","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"mechanosensory behavior","termid":"GO:0007638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mechanosensory behavior","synonyms":[{"name":"regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"regulation of mechanosensory behaviour","type":"exact"}],"termid":"GO:1905790"}


id: PBO:0113023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional DNA-directed DNA polymerase/deoxycytidyl transferase; involved in repair of abasic sites and adducted guanines in damaged DNA by translesion synthesis (TLS); forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p; relocalizes from nucleus to cytoplasm upon DNA replication stress; may be involved in meiosis","termid":"PBO:0113023"}


id: PBO:0116419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, fungi and plants","termid":"PBO:0116419"}


id: FYPO:0002790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"vacuoles present in increased numbers","synonyms":[{"name":"additional vacuoles present","type":"exact"},{"name":"extra vacuoles","type":"exact"},{"name":"vacuoles present in greater numbers","type":"exact"}],"termid":"FYPO:0002790"}


id: GO:0035770
data:
  {"annotated_genes":["SJAG_00474","SJAG_04407","SJAG_03070","SJAG_03901","SJAG_00544","SJAG_01026","SJAG_00423","SJAG_03113","SJAG_03876","SJAG_03283","SJAG_04744","SJAG_02164","SJAG_01317","SJAG_01761","SJAG_01897","SJAG_01222","SJAG_01159","SJAG_03498","SJAG_01479","SJAG_03277","SJAG_16454","SJAG_01053","SJAG_01954","SJAG_03696","SJAG_03023","SJAG_01650","SJAG_02628","SJAG_04427","SJAG_04342","SJAG_02573","SJAG_00507","SJAG_02239","SJAG_03460","SJAG_03597","SJAG_02808","SJAG_01548","SJAG_02638","SJAG_02263","SJAG_04672","SJAG_00686","SJAG_01910","SJAG_04880","SJAG_16457","SJAG_02995","SJAG_02213","SJAG_03214","SJAG_01625","SJAG_02540","SJAG_03424","SJAG_05010","SJAG_02419","SJAG_02592","SJAG_01436","SJAG_03954","SJAG_00391","SJAG_03276","SJAG_03762","SJAG_04350","SJAG_01512","SJAG_04480","SJAG_00966","SJAG_05694","SJAG_02663","SJAG_03132","SJAG_04772","SJAG_01822","SJAG_02469","SJAG_00285","SJAG_03157","SJAG_00759","SJAG_04640"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[116955,97815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015030"},{"annotations":[93321,99565,98887,107472,68340,96329,107118,115159,78450,90925,100709,115457,94783,91256,72289,90122,76313,89281,80476,101716,96328,92078,112901,75818,94782,57678,91468,96135,108750,91960,74267,81051,92036,107471,111703,111805,60517,94322,91672,96562,97865,119131,74702,107378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[79475,74410,77717,80490,81337,75927,92081,72786,81311,116985,81439,81402,118447,80486,101718,71608,71632,111706,79398,77165,77482,81675,76283,74826,78449,78299,71921,97371,76091,91470,80585,79256,75363,73389,114716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.","definition_xrefs":["GOC:go_curators","PMID:16520386","PMID:20368989","GOC:sp","PMID:21436445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01761":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03901":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"RNA granule","type":"narrow"},{"name":"RNP granule","type":"exact"},{"name":"mRNP granule","type":"exact"}],"termid":"GO:0035770","terms_by_termid":{"GO:0000932":null,"GO:0010494":null,"GO:0015030":null}}


id: PBO:0086875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sulfate permease; physically interacts with Hsp82p; green fluorescent protein (GFP)-fusion protein localizes to the ER; YPR003C is not an essential gene","termid":"PBO:0086875"}


id: PBO:0004376
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.39","termid":"PBO:0004376"}


id: PR:O43048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.01 gene.","definition_xrefs":["UniProtKB:O43048","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C215.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.01","synonyms":[{"name":"Spom972h-SPBC215.01","type":"exact"}],"termid":"PR:O43048"}


id: MONDO:0010770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme, Y-linked","secondary_identifiers":["OMIM:489000","MEDGEN:326389","UMLS:C1839046"],"synonyms":[{"name":"Ube1Y","type":"related"},{"name":"ubiquitin-activating enzyme, Y-linked","type":"exact"}],"termid":"MONDO:0010770","xrefs":{"Monarch":{"xref_id":"0010770"}}}


id: MONDO:0014571
data:
  {"annotated_genes":["SJAG_03588","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87173,87174],"is_not":false,"summary":null,"term":"MONDO:0014571"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18199","DOID:0111442","OMIM:616289","MEDGEN:898858","UMLS:C4225384"],"synonyms":[{"name":"ACO2 autosomal recessive isolated optic atrophy","type":"exact"},{"name":"OPA9","type":"related"},{"name":"autosomal recessive isolated optic atrophy caused by mutation in ACO2","type":"exact"},{"name":"optic atrophy 9","type":"exact"}],"termid":"MONDO:0014571","terms_by_termid":{"MONDO:0014571":null},"xrefs":{"Monarch":{"xref_id":"0014571"}}}


id: PBO:0031208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_activation_of_bipolar_cell_growth","termid":"PBO:0031208"}


id: PBO:0042237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle progression 1","termid":"PBO:0042237"}


id: MONDO:0020260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myasthenic syndrome with eye involvement (obsolete MONDO:0020260)","secondary_identifiers":["Orphanet:98690"],"termid":"MONDO:0020260","xrefs":{"Monarch":{"xref_id":"0020260"}}}


id: PR:Q09847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup146 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup146 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.06c","synonyms":[{"name":"Spom972h-nup146","type":"exact"},{"name":"nuclear pore protein nup146 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09847"}


id: GO:0010990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of SMAD protein complex assembly. SMAD protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of SMAD protein complex assembly (obsolete GO:0010990)","termid":"GO:0010990"}


id: MONDO:0003203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pituitary carcinoma (obsolete MONDO:0003203)","termid":"MONDO:0003203","xrefs":{"Monarch":{"xref_id":"0003203"}}}


id: MONDO:1011231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, sheep","secondary_identifiers":["OMIA:000337-9940"],"termid":"MONDO:1011231","xrefs":{"Monarch":{"xref_id":"1011231"}}}


id: PATO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's absence or closure of a normal body orifice or tubular passage.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closed","termid":"PATO:0000608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atretic","synonyms":[{"name":"atresia","type":"exact"}],"termid":"PATO:0001819"}


id: PBO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transporter (predicted)","termid":"PBO:0000139"}


id: PBO:0065693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine 5'-phosphatase pseudogene 2","termid":"PBO:0065693"}


id: GO:1990874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell proliferation","synonyms":[{"name":"VSMC proliferation","type":"exact"},{"name":"vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1990874"}


id: PBO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(9)(q12)","termid":"PBO:0047914"}


id: PR:O42991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1601 gene.","definition_xrefs":["UniProtKB:O42991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L16-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.13c","synonyms":[{"name":"Spom972h-rpl1601","type":"exact"}],"termid":"PR:O42991"}


id: PBO:0066406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELA divergent transcript","termid":"PBO:0066406"}


id: GO:0061107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the seminal vesicle over time, from its formation to the mature structure. The seminal vesicle is a gland that contributes to the production of semen.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle development","termid":"GO:0061107"}


id: PATO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction approximating the shape of a circle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circling direction","termid":"PATO:0001904"}


id: MONDO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome due to CDKN1C mutation","secondary_identifiers":["MEDGEN:1826157","UMLS:C5680918","GARD:17160","Orphanet:231120"],"termid":"MONDO:0016476","xrefs":{"Monarch":{"xref_id":"0016476"}}}


id: MONDO:0970998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auroneurodental syndrome","secondary_identifiers":["UMLS:C5889721","MEDGEN:1861965","OMIM:620830"],"termid":"MONDO:0970998","xrefs":{"Monarch":{"xref_id":"0970998"}}}


id: PBO:0018231
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli ispA","termid":"PBO:0018231"}


id: PBO:0012523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_morphogenesis_of","termid":"PBO:0012523"}


id: PBO:0114089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase peripheral stalk-membrane subunit, Atp4","termid":"PBO:0114089"}


id: MONDO:0013614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertelorism-preauricular sinus-punctual pits-deafness syndrome","secondary_identifiers":["UMLS:C4751125","Orphanet:293958","MEDGEN:1659106","GARD:17351","OMIM:614187"],"synonyms":[{"name":"HPPD","type":"exact"},{"name":"hypertelorism, preauricular sinus, punctal pits, and deafness","type":"related"},{"name":"hypertelorism-preauricular sinus-punctual pits-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0013614","xrefs":{"Monarch":{"xref_id":"0013614"}}}


id: GO:0010727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:dph","GOC:tb","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"negative regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010727"}


id: GO:0072261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells in the metanephros by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraglomerular mesangial cell proliferation","termid":"GO:0072122"},{"relation_name":"is_a","term_name":"cell proliferation involved in metanephros development","termid":"GO:0072203"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric extraglomerular mesangial cell proliferation involved in metanephros development","synonyms":[{"name":"metanephric Goormaghtigh proliferation","type":"related"},{"name":"metanephric lacis cell proliferation","type":"related"}],"termid":"GO:0072261"}


id: GO:0007496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior midgut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midgut development","termid":"GO:0007494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut development","termid":"GO:0007496"}


id: GO:0044606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-serine-choline phosphate + H2O = protein-serine + choline phosphate.","definition_xrefs":["GOC:sp","PMID:22158903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phosphocholine hydrolase activity","termid":"GO:0044606"}


id: MONDO:0012730
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86778],"is_not":false,"summary":null,"term":"MONDO:0012730"}]},"cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the ACTA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15527","UMLS:C2673186","OMIM:611788","MEDGEN:435866","MESH:C567085"],"synonyms":[{"name":"AAT6","type":"related"},{"name":"ACTA2 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 6","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 6","type":"exact"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in ACTA2","type":"exact"},{"name":"familial thoracic aortic aneurysm with livedo reticularis and iris flocculi","type":"related"}],"termid":"MONDO:0012730","terms_by_termid":{"MONDO:0012730":null},"xrefs":{"Monarch":{"xref_id":"0012730"}}}


id: GO:0071583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of zinc ions (Zn2+) from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zinc ion transmembrane transport","termid":"GO:0071580"},{"relation_name":"is_a","term_name":"negative regulation of zinc ion transport","termid":"GO:0071582"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of zinc ion transmembrane transport","synonyms":[{"name":"negative regulation of zinc ion membrane transport","type":"exact"}],"termid":"GO:0071583"}


