# terms

id: GO:0061533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine secretion","termid":"GO:0048243"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"norepinephrine secretion, neurotransmission","synonyms":[{"name":"noradrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061533"}


id: MONDO:0020426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malposition of the coronary ostium is a rare coronary artery congenital malformation characterized by displacement of one of the coronary arteries, originating closer to the aortic root or to the commissural area. The anomaly is considered to be asymptomatic, however, it may impose surgical difficulties during aortic root surgery.","definition_xrefs":["Orphanet:99090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malposition of the coronary ostium","secondary_identifiers":["UMLS:C3532077","MEDGEN:759190","GARD:19645"],"termid":"MONDO:0020426","xrefs":{"Monarch":{"xref_id":"0020426"}}}


id: PBO:0017511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity Bmt2 (predicted)","termid":"PBO:0017511"}


id: GO:0043301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of leukocyte degranulation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"negative regulation of regulated secretory pathway","termid":"GO:1903306"},{"relation_name":"negatively_regulates","term_name":"leukocyte degranulation","termid":"GO:0043299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte degranulation","synonyms":[{"name":"down regulation of leukocyte degranulation","type":"exact"},{"name":"down-regulation of leukocyte degranulation","type":"exact"},{"name":"downregulation of leukocyte degranulation","type":"exact"},{"name":"inhibition of leukocyte degranulation","type":"narrow"},{"name":"negative regulation of immune cell degranulation","type":"exact"},{"name":"negative regulation of leucocyte degranulation","type":"exact"}],"termid":"GO:0043301"}


id: GO:0045668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of osteoblast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of osteoblast differentiation","termid":"GO:0045667"},{"relation_name":"negatively_regulates","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast differentiation","synonyms":[{"name":"down regulation of osteoblast differentiation","type":"exact"},{"name":"down-regulation of osteoblast differentiation","type":"exact"},{"name":"downregulation of osteoblast differentiation","type":"exact"},{"name":"inhibition of osteoblast differentiation","type":"narrow"}],"termid":"GO:0045668"}


id: PBO:0070935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 43","termid":"PBO:0070935"}


id: GO:0061407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (obsolete GO:0061407)","termid":"GO:0061407"}


id: GO:0032976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which enzymes, such as aspartate aminotransferase, are enabled to move from the mitochondrial matrix into the cytosol, as part of the apoptotic process.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","PMID:9843949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic mitochondrial changes","termid":"GO:0008637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"release of matrix enzymes from mitochondria","synonyms":[{"name":"mAST release from mitochondria","type":"narrow"},{"name":"release of aspartate aminotransferase from mitochondria","type":"narrow"}],"termid":"GO:0032976"}


id: PBO:0052771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 63","termid":"PBO:0052771"}


id: GO:0106113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic cohesin ssDNA (lagging strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic cohesin ssDNA (lagging strand) loading (obsolete GO:0106113)","termid":"GO:0106113"}


id: PBO:0074968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-10","termid":"PBO:0074968"}


id: GO:1990032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel fiber results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium.","definition_xrefs":["ISBN:0195159551","NIF_Subcellular:nlx_330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"parallel fiber","termid":"GO:1990032"}


id: GO:0102345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxylignoceroyl-CoA(4-) = trans-2-tetracosenoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.134"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-lignoceroyl-CoA dehydratase activity (obsolete GO:0102345)","termid":"GO:0102345"}


id: MONDO:1010224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign prostatic hyperplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostatic hyperplasia, non-human animal","secondary_identifiers":["OMIA:002355"],"termid":"MONDO:1010224","xrefs":{"Monarch":{"xref_id":"1010224"}}}


id: PBO:0089199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase Ccd1","termid":"PBO:0089199"}


id: PBO:0043540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 8","termid":"PBO:0043540"}


id: PBO:0089219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor, RNA polymerase I specific, Hmo1","termid":"PBO:0089219"}


id: GO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of glial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell apoptotic process","termid":"GO:0034350"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell apoptotic process","synonyms":[{"name":"activation of glial cell apoptosis","type":"narrow"},{"name":"positive regulation of glial cell apoptosis","type":"narrow"},{"name":"stimulation of glial cell apoptosis","type":"narrow"},{"name":"up regulation of glial cell apoptosis","type":"exact"},{"name":"up-regulation of glial cell apoptosis","type":"exact"},{"name":"upregulation of glial cell apoptosis","type":"exact"}],"termid":"GO:0034352"}


id: GO:0005981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"regulates","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glycogen catabolic process","synonyms":[{"name":"regulation of glycogen breakdown","type":"exact"},{"name":"regulation of glycogen catabolism","type":"exact"},{"name":"regulation of glycogen degradation","type":"exact"},{"name":"regulation of glycogenolysis","type":"exact"}],"termid":"GO:0005981"}


id: PBO:0084390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity zinc transporter of the plasma membrane; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084390"}


id: PBO:0047455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and double SH3 domains 2","termid":"PBO:0047455"}


id: PBO:0044948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 3","termid":"PBO:0044948"}


id: GO:0019100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in a male organism's germ line.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination, germ-line","termid":"GO:0007542"},{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"},{"relation_name":"is_a","term_name":"male sex determination","termid":"GO:0030238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line sex determination","termid":"GO:0019100"}


id: MONDO:1010304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial chondromatosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial chondromatosis, non-human animal","secondary_identifiers":["OMIA:001174"],"termid":"MONDO:1010304","xrefs":{"Monarch":{"xref_id":"1010304"}}}


id: PR:O59758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized metal transporter C1020.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.03","synonyms":[{"name":"Spom972h-mmt1","type":"exact"}],"termid":"PR:O59758"}


id: GO:0031850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a delta-type opioid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"delta-type opioid receptor binding","synonyms":[{"name":"delta-type opioid receptor ligand","type":"narrow"},{"name":"enkephalin receptor binding","type":"related"}],"termid":"GO:0031850"}


id: PBO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein trafficking protein Pga2 (predicted)","termid":"PBO:0003681"}


id: GO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to non-antigenic stimuli such as heat or physical trauma.","definition_xrefs":["PMID:16459497","GOC:jal","PMID:9073326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}


id: PBO:0067396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 502, pseudogene","termid":"PBO:0067396"}


id: GO:0102283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: C20 sphinganine(1+) + NADP = C20 3-dehydrosphinganine(1+) + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-ketodihydrosphinganine (C20) reductase activity (obsolete GO:0102283)","termid":"GO:0102283"}


id: PATO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000928 absolute photosensitivity (obsolete PATO:0000928)","termid":"PATO:0000928"}


id: PATO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001077 absolute pressure (obsolete PATO:0001077)","termid":"PATO:0001077"}


id: MOD:01544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01544"}


id: MONDO:0004777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammatory process affecting the larynx. It is caused by bacteria, viruses, or vocal strain. Signs and symptoms include sore throat, cough, swallowing difficulties, and hoarseness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngitis","termid":"MONDO:0002647"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute laryngitis","secondary_identifiers":["ICD10CM:J04.0","icd11.foundation:1180710837","ICD9:464.01","SCTID:6655004","ICD9:464.00","ICD9:464.0","UMLS:C0001327","MEDGEN:1317","NCIT:C26688","DOID:9396"],"synonyms":[{"name":"laryngitis","type":"broad"},{"name":"laryngitis, acute","type":"exact"}],"termid":"MONDO:0004777","xrefs":{"Monarch":{"xref_id":"0004777"}}}


id: MONDO:0011911
data:
  {"annotated_genes":["SJAG_02539","SJAG_03153"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88728,88729],"is_not":false,"summary":null,"term":"MONDO:0011911"}]},"cv_name":"mondo","definition":"Craniolenticulosutural dysplasia (CLSD), also known as Boyadjiev-Jabs syndrome, is characterized by the specific association of large and late-closing fontanels, hypertelorism, early-onset cataract and mild generalized skeletal dysplasia.","definition_xrefs":["Orphanet:50814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02539":null,"SJAG_03153":null},"genotype_count":0,"is_obsolete":false,"name":"craniolenticulosutural dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16647","DOID:0070307","OMIM:607812","icd11.foundation:970423180","MESH:C564332","MEDGEN:334671","SCTID:725100001","UMLS:C1843042"],"synonyms":[{"name":"Boyadjiev-Jabs syndrome","type":"exact"},{"name":"CLSD","type":"related"},{"name":"cranio-lenticulo-sutural dysplasia, CLSD","type":"exact"},{"name":"craniolenticulosutural dysplasia","type":"exact"}],"termid":"MONDO:0011911","terms_by_termid":{"MONDO:0011911":null},"xrefs":{"Monarch":{"xref_id":"0011911"}}}


id: FYPO:0000610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through S phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic S phase progression","synonyms":[{"name":"abnormal S phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic S phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in S","type":"exact"},{"name":"mitotic cell cycle progression in S phase: abnormal","type":"related"}],"termid":"FYPO:0000610"}


id: PBO:0080747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 2","termid":"PBO:0080747"}


id: PBO:0091599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit Mug5","termid":"PBO:0091599"}


id: MONDO:0003444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenoma that arises from the intrahepatic biliary tree.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct adenoma","termid":"MONDO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intrahepatic bile duct adenoma","secondary_identifiers":["UMLS:C1331535","DOID:5437","MEDGEN:272250","NCIT:C7126"],"synonyms":[{"name":"adenoma of intrahepatic bile duct","type":"related"},{"name":"adenoma of the intrahepatic bile duct","type":"exact"},{"name":"adenoma, HEPATOCHOLANGIOCELLULAR, benign","type":"exact"},{"name":"intrahepatic bile duct adenoma","type":"exact"}],"termid":"MONDO:0003444","xrefs":{"Monarch":{"xref_id":"0003444"}}}


id: PATO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed mesiolaterally.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesiolateral orientation","termid":"PATO:0002524"}


id: GO:0072096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072095"},{"relation_name":"negatively_regulates","term_name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072096"}


id: MONDO:0020330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete classic Hodgkin lymphoma, lymphocyte-depleted type (obsolete MONDO:0020330)","termid":"MONDO:0020330","xrefs":{"Monarch":{"xref_id":"0020330"}}}


id: PATO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000301 absolute speed value (obsolete PATO:0000301)","termid":"PATO:0000301"}


id: MONDO:0009005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lack of production of either functional C1r or C1s protein, due to a genetic defect. Approximately 60% of patients with a C1r/C1s deficiency will develop a severe systemic lupus erythematosus at an early age. Patients also present with frequent sinopulmonary infections often with Streptococcus pneumoniae.","definition_xrefs":["NCIT:C119991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a classical component pathway complement deficiency","termid":"MONDO:0015699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component C1r/C1s deficiency","secondary_identifiers":["UMLS:C3150274","GARD:15155","MEDGEN:461624","OMIM:216950","icd11.foundation:448435460"],"synonyms":[{"name":"C1r/C1s deficiency","type":"related"},{"name":"complement component C1r/C1s deficiency","type":"exact"}],"termid":"MONDO:0009005","xrefs":{"Monarch":{"xref_id":"0009005"}}}


id: PBO:0046672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen related receptor gamma","termid":"PBO:0046672"}


id: MONDO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A potentially life-threatening pregnancy-related disorder characterized by tonic-clonic seizures in association with hypertension after the twentieth week of gestation and up to six weeks postpartum and in the absence of other potential causes of seizures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"preeclampsia","termid":"MONDO:0005081"},{"relation_name":"is_a","term_name":"toxemia of pregnancy","termid":"MONDO:0045048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eclampsia","secondary_identifiers":["MEDGEN:4443","MESH:D004461","UMLS:C0013537","icd11.foundation:1759760659","NCIT:C87167","DOID:13593","ICD10CM:O15","SCTID:303063000","ICD9:642.64"],"synonyms":[{"name":"eclampsia in puerperium","type":"exact"},{"name":"eclampsia, postpartum","type":"exact"},{"name":"postpartum eclampsia","type":"exact"}],"termid":"MONDO:0001754","xrefs":{"Monarch":{"xref_id":"0001754"}}}


id: MONDO:0010556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of chondrodysplasia punctata.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"non-rhizomelic chondrodysplasia punctata","termid":"MONDO:0015775"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata","secondary_identifiers":["DOID:0060292","MEDGEN:538019","UMLS:C0263627"],"synonyms":[{"name":"CPXD","type":"exact"},{"name":"X-linked dominant chondrodysplasia punctata","type":"related"},{"name":"chondrodysplasia punctata, X-linked","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant","type":"related"},{"name":"chondrodystrophia calcificans congenita","type":"exact"}],"termid":"MONDO:0010556","xrefs":{"Monarch":{"xref_id":"0010556"}}}


id: GO:0030221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires specialized features of a basophil cell.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil differentiation","synonyms":[{"name":"basophil cell differentiation","type":"exact"}],"termid":"GO:0030221"}


id: PBO:0090679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24-like protein involved in ribosome biogenesis Rlp24","termid":"PBO:0090679"}


id: PR:Q09826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sds23/moc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.13","synonyms":[{"name":"Spom972h-sds23","type":"exact"},{"name":"multicopy suppressor of overexpressed cyr1 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphoprotein at stationary phase 1 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09826"}


id: PBO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-like transcription factor and archael histone family protein","termid":"PBO:0001505"}


id: PBO:0004816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp10 (predicted)","termid":"PBO:0004816"}


id: GO:0052395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont nitric oxide production (obsolete GO:0052395)","synonyms":[{"name":"activation by organism of defense-related symbiont NO production","type":"exact"},{"name":"activation by organism of defense-related symbiont nitric acid production","type":"exact"},{"name":"induction by organism of defense-related symbiont NO production","type":"exact"},{"name":"induction by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052395"}


id: PBO:0054449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1846","termid":"PBO:0054449"}


id: PBO:0085571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein implicated in the regulation of ergosterol biosynthesis; one of a seven member gene family with a common essential function and non-essential unique functions; similar to human oxysterol binding protein (OSBP); SWAT-GFP and mCherry fusion proteins localize to the bud neck and vacuolar membrane; HES1 has a paralog, KES1, that arose from the whole genome duplication","termid":"PBO:0085571"}


id: GO:0043276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Apoptosis triggered by inadequate or inappropriate adherence to substrate e.g. after disruption of the interactions between normal epithelial cells and the extracellular matrix.","definition_xrefs":["PMID:37667281","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anoikis","secondary_identifiers":["Wikipedia:Anoikis"],"synonyms":[{"name":"detachment induced cell death","type":"exact"},{"name":"suspension induced apoptosis","type":"exact"}],"termid":"GO:0043276"}


id: PBO:0081666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 587B","termid":"PBO:0081666"}


id: GO:0030532
data:
  {"annotated_genes":["SJAG_01870","SJAG_03460","SJAG_03995","SJAG_02295","SJAG_04222","SJAG_01015","SJAG_03369","SJAG_05208","SJAG_04079","SJAG_01547","SJAG_00058","SJAG_02455","SJAG_02279","SJAG_05009","SJAG_01440","SJAG_01452","SJAG_03983","SJAG_01308","SJAG_03410","SJAG_00577","SJAG_04214","SJAG_03210","SJAG_00531","SJAG_05240","SJAG_04405","SJAG_04230","SJAG_01327","SJAG_02843","SJAG_04497","SJAG_00504","SJAG_00474","SJAG_01819","SJAG_02185","SJAG_01301","SJAG_03547","SJAG_01634","SJAG_00147","SJAG_00313","SJAG_04529","SJAG_03954","SJAG_00322","SJAG_04538","SJAG_05235","SJAG_03214","SJAG_03070","SJAG_00643","SJAG_01654","SJAG_04433","SJAG_02469","SJAG_03469","SJAG_04911","SJAG_04318","SJAG_03245","SJAG_02304","SJAG_01008","SJAG_00989","SJAG_00498","SJAG_00539","SJAG_00414","SJAG_00278","SJAG_04163"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71847,74828,81094,95775,78382,78483,81007,72148,104507,115112,75770,77374,75684,78799,108752,114201,74362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005685"},{"annotations":[111889,105002,111325,114491,77375,79543,118241,72088,109700,77211,78800,110349,79061,77666,82015,97601,73923,75874,74363,74908,81008,104209,77570,108153,114719,117707,72149,78383,116775,75581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005686"},{"annotations":[78384,76776,74364,72150,81009,78801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005687"},{"annotations":[118243,74366,72151,81035,110350,94887,79344,112969,79260,99793,116701,107637,77377,78091,80587,111890,96964,64119,79027,75980,112453,80078,81679,107682,72454,62888,80195,102419,79056,73313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"},{"annotations":[97603,81006,99178,117709,77373,78798,79026,116777,74138,69932,118244,108155,78381,74361,80194,110351,111891,72147,77726,114721,104503,102420,119677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005682"},{"annotations":[63447,81677,62887,72453,80593,79259,80586,73391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains at least one RNA of the small nuclear RNA (snRNA) class and as well as its associated proteins. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP, U4/U6 snRNP, or 7SK snRNP. Many, of these complexes become part of the spliceosome involved in splicing of nuclear mRNAs. Others are involved in regulation of transcription elongation or 3'-end processing of replication-dependent histone pre-mRNAs.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00278":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01547":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03245":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05208":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"small nuclear ribonucleoprotein complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:SnRNP"],"synonyms":[{"name":"small nuclear ribonucleoprotein","type":"exact"},{"name":"snRNP","type":"exact"}],"termid":"GO:0030532","terms_by_termid":{"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005688":null,"GO:0046540":null}}


id: GO:0060536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage morphogenesis","termid":"GO:0060536"}


id: _global:transports_or_maintains_localization_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Holds between p and c when p is a localization process (localization covers maintenance of localization as well as its establishment)  and the outcome of this process is to regulate the localization of c.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"_global:related_via_localization_to"},{"relation_name":"is_a","term_name":"results_in_changes_to_anatomical_or_cellular_structure","termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports_or_maintains_localization_of","secondary_identifiers":["RO:0002313"],"synonyms":[{"name":"regulates location of","type":"related"}],"termid":"_global:transports_or_maintains_localization_of"}


id: PBO:0062881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 pseudogene 2","termid":"PBO:0062881"}


id: GO:0055104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ligase.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0140678","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"ligase inhibitor activity","termid":"GO:0055104"}


id: PBO:0041359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 2","termid":"PBO:0041359"}


id: PBO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 6 pseudogene","termid":"PBO:0048664"}


id: FYPO:0003101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly occurs to a lower extent than normal in regions containing protein-coding genes. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PMID:24095277","PomBase:mah","GO:0031507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"decreased heterochromatin assembly at protein coding gene","synonyms":[{"name":"decreased heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at protein-coding gene","type":"exact"},{"name":"decreased heterochromatin formation at protein coding gene","type":"exact"},{"name":"reduced heterochromatin assembly at protein coding gene","type":"exact"}],"termid":"FYPO:0003101"}


id: PBO:0038966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADNP antisense RNA 1","termid":"PBO:0038966"}


id: PBO:0076208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 18","termid":"PBO:0076208"}


id: MONDO:0851105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrovascular benign neoplasm","secondary_identifiers":["DOID:60007"],"termid":"MONDO:0851105","xrefs":{"Monarch":{"xref_id":"0851105"}}}


id: PBO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 3","termid":"PBO:0050912"}


id: SO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 1 base long that is included as part of two separate codons during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_translational_frameshift","synonyms":[{"name":"minus 1 ribosomal frameshift","type":"exact"},{"name":"minus 1 ribosomal slippage","type":"exact"},{"name":"minus 1 translational frameshift","type":"exact"}],"termid":"SO:0002329"}


id: GO:0019990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine metabolic process","termid":"GO:0019889"},{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine catabolic process","synonyms":[{"name":"pteridine breakdown","type":"exact"},{"name":"pteridine catabolism","type":"exact"},{"name":"pteridine degradation","type":"exact"}],"termid":"GO:0019990"}


id: GO:0000215
data:
  {"annotated_genes":["SJAG_03913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75516],"is_not":false,"summary":null,"term":"GO:0000215"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-phospho-[ligated tRNA] + NAD+ = mature tRNA + ADP ribose 1'',2''-phosphate + nicotinamide + H2O. This reaction is the transfer of the splice junction 2-phosphate from ligated tRNA to NAD+ to produce ADP-ribose 1'-2' cyclic phosphate.","definition_xrefs":["PMID:9148937","EC:2.7.1.160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA 2'-phosphotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.7.1.160-RXN","RHEA:23324","GO:0008665"],"synonyms":[{"name":"2'-phospho-[ligated tRNA]:NAD+ phosphotransferase activity","type":"related"},{"name":"2'-phospho-tRNA:NAD+ phosphotransferase activity","type":"related"},{"name":"2'-phosphotransferase activity","type":"broad"},{"name":"Tpt1","type":"related"},{"name":"Tpt1p","type":"related"},{"name":"yeast 2'-phosphotransferase activity","type":"narrow"}],"termid":"GO:0000215","terms_by_termid":{"GO:0000215":null}}


id: MONDO:0006534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of physical urticarias (or hives) that appears when a person is sweating.","definition_xrefs":["EFO:1000679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical urticaria","termid":"MONDO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cholinergic urticaria","secondary_identifiers":["ICD10CM:L50.5","icd11.foundation:855107748","MEDGEN:508939","UMLS:C0152230","DOID:14443","SCTID:73098005","ICD9:708.5","Wikipedia:Cholinergic_urticaria"],"termid":"MONDO:0006534","xrefs":{"Monarch":{"xref_id":"0006534"}}}


id: MONDO:0012622
data:
  {"annotated_genes":["SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88672],"is_not":false,"summary":null,"term":"MONDO:0012622"}]},"cv_name":"mondo","definition":"This disease is characterized by progressive cerebellar ataxia with pyramidal and spinal cord dysfunction, associated with distinctive MRI anomalies and increased lactate in the abnormal white matter.","definition_xrefs":["Orphanet:137898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy with brain stem and spinal cord involvement-high lactate syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:703537008","NORD:1941","UMLS:C1970180","GARD:12652","MESH:C567009","MEDGEN:370845","OMIM:611105"],"synonyms":[{"name":"LBSL","type":"exact"},{"name":"Leukoencephalopathy with Brain Stem and Spinal Cord Involvement and Lactate Elevation","type":"exact"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement - high lactate","type":"related"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement - lactate elevation","type":"related"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement and lactate elevation","type":"related"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement-high lactate syndrome","type":"exact"},{"name":"leukoencephalopathy with brain stem and spinal cord involvement-lactate elevation syndrome","type":"exact"},{"name":"leukoencephalopathy with brainstem and spinal cord involvement and lactate elevation","type":"related"},{"name":"mitochondrial aspartyl-tRNA synthetase deficiency","type":"related"}],"termid":"MONDO:0012622","terms_by_termid":{"MONDO:0012622":null},"xrefs":{"Monarch":{"xref_id":"0012622"}}}


id: MONDO:0100368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy, which may include conditions described as retinitis pigmentosa and Leber congenital amaurosis, caused by biallelic variants in the RPE65 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"RPE65-related recessive retinopathy","synonyms":[{"name":"LCA2","type":"narrow"},{"name":"Leber congenital amaurosis 2","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in RPE65","type":"narrow"},{"name":"Leber congenital amaurosis type 2","type":"narrow"},{"name":"RP20","type":"narrow"},{"name":"RPE65 Leber congenital amaurosis","type":"narrow"},{"name":"RPE65 retinitis pigmentosa","type":"narrow"},{"name":"RPE65-related recessive retinopathy","type":"exact"},{"name":"amaurosis congenita of Leber 2","type":"narrow"},{"name":"amaurosis congenita of Leber II","type":"narrow"},{"name":"amaurosis congenita of Leber, type 2","type":"narrow"},{"name":"recessive RPE65 retinopathy","type":"exact"},{"name":"retinitis pigmentosa 20","type":"narrow"},{"name":"retinitis pigmentosa caused by mutation in RPE65","type":"narrow"}],"termid":"MONDO:0100368","xrefs":{"Monarch":{"xref_id":"0100368"}}}


id: MONDO:0011310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long chain fatty acids, defect in transport of","secondary_identifiers":["MEDGEN:350307","OMIM:603376","UMLS:C1863958"],"synonyms":[{"name":"long chain fatty acids, defect in TRANSPORT OF","type":"related"}],"termid":"MONDO:0011310","xrefs":{"Monarch":{"xref_id":"0011310"}}}


id: MONDO:0007367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 1","secondary_identifiers":["OMIM:121210","SCTID:230432008","UMLS:C1852577","DOID:0111307","MESH:C565162","ICD9:780.39","MEDGEN:338959"],"synonyms":[{"name":"FEB1","type":"exact"},{"name":"convulsions, familial febrile","type":"related"},{"name":"convulsions, familial febrile, 1","type":"related"},{"name":"febrile seizures, familial, 1","type":"exact"}],"termid":"MONDO:0007367","xrefs":{"Monarch":{"xref_id":"0007367"}}}


id: PR:G2TRP5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox7 gene.","definition_xrefs":["UniProtKB:G2TRP5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.17","synonyms":[{"name":"Spom972h-cox7","type":"exact"}],"termid":"PR:G2TRP5"}


id: PBO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose residue biosynthesis protein Pvg2","termid":"PBO:0002324"}


id: MONDO:0006472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tracheal carcinoma (obsolete MONDO:0006472)","termid":"MONDO:0006472","xrefs":{"Monarch":{"xref_id":"0006472"}}}


id: PBO:0079476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twisted gastrulation BMP signaling modulator 1","termid":"PBO:0079476"}


id: GO:0090660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurological system process driven by motile cilia on ependymal cells of the brain by which cerebrospinal fluid circulates from the sites of secretion to the sites of absorption. In ventricular cavities, the flow is unidirectional and rostrocaudal, in subarachnoid spaces, the flow is multi-directional.","definition_xrefs":["PMID:22100360","GOC:mgi_curators","PMID:24229449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"},{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cerebrospinal fluid circulation","synonyms":[{"name":"CSF circulation","type":"exact"},{"name":"CSF flow","type":"exact"},{"name":"cerebrospinal fluid flow","type":"exact"}],"termid":"GO:0090660"}


id: GO:1904697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:9788538","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acinar cell proliferation","synonyms":[{"name":"regulation of acinic cell proliferation","type":"exact"},{"name":"regulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904697"}


id: GO:0097031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I biogenesis (obsolete GO:0097031)","termid":"GO:0097031"}


id: PBO:0054984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2398","termid":"PBO:0054984"}


id: GO:0140683
data:
  {"annotated_genes":["SJAG_02401","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61230,95859],"is_not":false,"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a di or a monomethyl-lysine residue at position 9 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:16603238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3K9 demethylase activity","termid":"GO:0032454"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02401":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0032452","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"histone H3K9me/H3K9me2 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["EC:1.14.11.65","RHEA:60188"],"synonyms":[{"name":"histone H3-di/monomethyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone H3K9me demethylase activity","type":"broad"},{"name":"histone H3K9me2 demethylase activity","type":"broad"}],"termid":"GO:0140683","terms_by_termid":{"GO:0140683":null}}


id: GO:1901658
data:
  {"annotated_genes":["SJAG_01359","SJAG_01673","SJAG_02580","SJAG_02959","SJAG_00957","SJAG_04927"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89352,89353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[90967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006216"},{"annotations":[76948,92844,114005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[92422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosyl compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound breakdown","type":"exact"},{"name":"glycosyl compound catabolism","type":"exact"},{"name":"glycosyl compound degradation","type":"exact"}],"termid":"GO:1901658","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006216":null,"GO:0046135":null}}


id: PATO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000775 learning value (obsolete PATO:0000775)","termid":"PATO:0000775"}


id: PBO:0050779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1D","termid":"PBO:0050779"}


id: MONDO:0030702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of atherosclerosis.","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of cardiovascular system","termid":"MONDO:0000603"},{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune atherosclerosis","secondary_identifiers":["DOID:0040096"],"termid":"MONDO:0030702","xrefs":{"Monarch":{"xref_id":"0030702"}}}


id: FYPO:0006921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of gene conversion at replication fork barriers is decreased.","definition_xrefs":["PomBase:mah","PMID:31149897","PMID:28586299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased gene conversion during vegetative growth","termid":"FYPO:0000185"},{"relation_name":"is_a","term_name":"decreased DNA recombination at mitotic DNA replication fork barriers","termid":"FYPO:0006920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased gene conversion at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased gene conversion at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased gene conversion at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"reduced gene conversion at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006921"}


id: PBO:0081129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP1 zinc finger protein","termid":"PBO:0081129"}


id: GO:0002780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antibacterial peptide.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15638771","PMID:11807545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"},{"relation_name":"part_of","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}


id: PBO:0076557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 1","termid":"PBO:0076557"}


id: MONDO:0013044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical hemolytic uremic syndrome with complement gene abnormality","termid":"MONDO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with thrombomodulin anomaly","secondary_identifiers":["OMIM:612926","MEDGEN:414541","Orphanet:217023","UMLS:C2752036","GARD:18556"],"synonyms":[{"name":"AHUS6","type":"related"},{"name":"Ahus, susceptibility to, 6","type":"related"},{"name":"D-HUS with thrombomodulin anomaly","type":"exact"},{"name":"aHUS with thrombomodulin anomaly","type":"exact"},{"name":"atypical HUS with thrombomodulin anomaly","type":"exact"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, 6","type":"related"},{"name":"hemolytic uremic syndrome, atypical, susceptibility to, type 6","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with thrombomodulin anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with thrombomodulin anomaly","type":"exact"},{"name":"susceptibility to atypical hemolytic uremic syndrome 6","type":"related"}],"termid":"MONDO:0013044","xrefs":{"Monarch":{"xref_id":"0013044"}}}


id: PBO:0085237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis/trans-isomerase; activator of the phosphotyrosyl phosphatase activity of PP2A; involved in G1 phase progression, microtubule dynamics, bud morphogenesis and DNA repair; required for rapid reduction of Sgs1p levels in response to rapamycin; subunit of the Tap42p-Sit4p-Rrd1p complex; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085237"}


id: MONDO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Purpura associated with a reduction in circulating blood platelets which can result from a variety of factors.","definition_xrefs":["NCIT:C26870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia","termid":"MONDO:0002049"},{"relation_name":"is_a","term_name":"purpura","termid":"MONDO:0002610"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thrombocytopenic purpura","secondary_identifiers":["UMLS:C0857305","MESH:D011696","SCTID:302873008","MEDGEN:208992","NANDO:2100188"],"synonyms":[{"name":"purpura, thrombopenic","type":"related"},{"name":"purpuras, thrombocytopenic","type":"related"},{"name":"purpuras, thrombopenic","type":"related"},{"name":"thrombocytopenic purpura","type":"exact"},{"name":"thrombocytopenic purpuras","type":"related"},{"name":"thrombopenic purpura","type":"related"},{"name":"thrombopenic purpuras","type":"related"}],"termid":"MONDO:0043768","xrefs":{"Monarch":{"xref_id":"0043768"}}}


id: GO:0046115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine, guanine riboside, a nucleoside with a wide species distribution.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine metabolic process","termid":"GO:0008617"},{"relation_name":"is_a","term_name":"guanosine-containing compound catabolic process","termid":"GO:1901069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanosine catabolic process","secondary_identifiers":["GO:0006160"],"synonyms":[{"name":"guanosine breakdown","type":"exact"},{"name":"guanosine catabolism","type":"exact"},{"name":"guanosine degradation","type":"exact"},{"name":"guanosine phosphorolysis","type":"related"}],"termid":"GO:0046115"}


id: GO:0045332
data:
  {"annotated_genes":["SJAG_02897","SJAG_03050","SJAG_01945","SJAG_02114","SJAG_02132","SJAG_02957","SJAG_01095","SJAG_06440","SJAG_00576","SJAG_00589","SJAG_02516","SJAG_01731","SJAG_01470","SJAG_03209","SJAG_00587","SJAG_02943","SJAG_05209","SJAG_00669","SJAG_04734","SJAG_00018","SJAG_02581","SJAG_00230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73749,74641,74734,76219,76463,92286,92287,92288,92289,92290,92291,92292,92293,92294,101256,103075,104009,111335],"is_not":false,"summary":null,"term":"GO:0045332"},{"annotations":[63598,70166,60403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[74915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The movement of a phospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["PMID:20302864","PMID:20043909","ISBN:0815316194","PMID:16452632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03209":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"phospholipid translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1660502","Reactome:R-HSA-1660524","Reactome:R-HSA-1660537","Reactome:R-HSA-1660508","Reactome:R-HSA-1660510"],"synonyms":[{"name":"flippase","type":"related"},{"name":"phospholipid scrambling","type":"related"}],"termid":"GO:0045332","terms_by_termid":{"GO:0017121":null,"GO:0045332":null,"GO:0140331":null}}


id: PBO:0083029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; YCR097WA refers to an incorrect annotation of HMRA1 that appeared in the original version of Chromosome III (1996) but was later withdrawn and subsequently removed from SGD","termid":"PBO:0083029"}


id: PBO:0088585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex arrestin related endocytic adaptor ubunit Vps26","termid":"PBO:0088585"}


id: PATO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having the shape of an incisor tooth.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/incisiform"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incisiform","termid":"PATO:0002209"}


id: PATO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-fertile","termid":"PATO:0001767"}


id: PBO:0084986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent glutamate dehydrogenase; synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh1p; expression regulated by nitrogen and carbon sources; GDH3 has a paralog, GDH1, that arose from the whole genome duplication","termid":"PBO:0084986"}


id: PBO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24 (predicted)","termid":"PBO:0001713"}


id: PBO:0039686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 3","termid":"PBO:0039686"}


id: GO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the potential difference across the mitochondrial membrane is reduced from its steady state level.","definition_xrefs":["Wikipedia:Mitochondrion","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"},{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial depolarization","synonyms":[{"name":"mitochondria depolarization","type":"exact"},{"name":"mitochondrial depolarisation","type":"exact"},{"name":"mitochondrial membrane depolarization","type":"exact"},{"name":"mitochondrion depolarization","type":"exact"}],"termid":"GO:0051882"}


id: GO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens morphogenesis in camera-type eye","synonyms":[{"name":"lens morphogenesis","type":"exact"},{"name":"lens morphogenesis in camera-style eye","type":"exact"}],"termid":"GO:0002089"}


id: MONDO:1012355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy, non-human animal","termid":"MONDO:1011872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, domestic cat","secondary_identifiers":["OMIA:001292-9685"],"termid":"MONDO:1012355","xrefs":{"Monarch":{"xref_id":"1012355"}}}


id: MONDO:0100396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(7;12)(q36;p13). (A chromosomal translocation involving the ETV6 gene on chromosome 12p13 and HLXB9 gene on chromosome 7q36.)","definition_xrefs":["NCIT:C122689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(7;12)(q36;p13)","secondary_identifiers":["NCIT:C122690"],"synonyms":[{"name":"AML, t(7;12)(q36;p13)","type":"exact"}],"termid":"MONDO:0100396","xrefs":{"Monarch":{"xref_id":"0100396"}}}


id: PATO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male","termid":"PATO:0000384"}


id: MONDO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discharge or drainage of fluid from the ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discharging ear","secondary_identifiers":["DOID:10261","ICD9:388.6","ICD9:388.60","MEDGEN:57608","UMLS:C0155540"],"termid":"MONDO:0000988","xrefs":{"Monarch":{"xref_id":"0000988"}}}


id: PBO:0069189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 443, pseudogene","termid":"PBO:0069189"}


id: FYPO:0001617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-isoleucine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular isoleucine level","synonyms":[{"name":"decreased cellular L-isoleucine level","type":"exact"},{"name":"decreased cellular isoleucine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular isoleucine level during vegetative growth","type":"exact"},{"name":"decreased level of isoleucine in cell","type":"exact"},{"name":"reduced cellular isoleucine level","type":"exact"},{"name":"reduced level of isoleucine in cell","type":"exact"}],"termid":"FYPO:0001617"}


id: PBO:0058327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4700","termid":"PBO:0058327"}


id: PBO:0110976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 6 (LAN blood group)","termid":"PBO:0110976"}


id: PBO:0108969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 2A","termid":"PBO:0108969"}


id: MONDO:0015126
data:
  {"annotated_genes":["SJAG_03920","SJAG_02398","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87136,87135,87134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011740"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"polyendocrinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826133","GARD:19800","UMLS:C5681797","Orphanet:101956"],"termid":"MONDO:0015126","terms_by_termid":{"MONDO:0011740":null},"xrefs":{"Monarch":{"xref_id":"0015126"}}}


id: MONDO:0100508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of uncommon neoplasms, usually seen in the salivary glands but occurring in the breast, with a variable clinicopathologic spectrum and divided into those with myoepithelial differentiation and those without. This group includes mammary adenoid cystic carcinoma, adenoid cystic carcinoma, mucoepidermoid carcinoma, acinic cell carcinoma, polymorphous low-grade adenocarcinoma and oncocytic carcinoma.","definition_xrefs":["Orphanet:213557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"salivary gland type cancer of the breast","secondary_identifiers":["ICD10CM:C50.3","UMLS:C4274421","MEDGEN:903115","icd11.foundation:2145246967","ICD10CM:C50.6","ICD10CM:C50.2","GARD:12774","SCTID:716593008"],"synonyms":[{"name":"salivary gland type carcinoma of the breast","type":"exact"}],"termid":"MONDO:0100508","xrefs":{"Monarch":{"xref_id":"0100508"}}}


id: PBO:0084670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial amino acid transporter; acts both as a glutamate uniporter and as an aspartate-glutamate exchanger; involved in nitrogen metabolism and nitrogen compound biosynthesis; human homolog SLC25A13 complements yeast null mutant","termid":"PBO:0084670"}


id: GO:0032841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcitonin, a peptide hormone responsible for reducing serum calcium levels by inhibiting osteoclastic bone reabsorption and promoting renal calcium excretion. It is synthesized and released by the C cells of the thyroid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcitonin binding","termid":"GO:0032841"}


id: PBO:0082046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-O-methyltransferase; responsible for modification of tRNA at position 4; C-terminal domain has similarity to Rossmann-fold (RFM) superfamily of RNA methyltransferases","termid":"PBO:0082046"}


id: PBO:0027389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027389"}


id: GO:0021886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron located in the hypothalamus. These neurons release gonadotrophin-releasing hormone as a neural transmitter.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:cls","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothalamus cell differentiation","termid":"GO:0021979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron differentiation","type":"exact"}],"termid":"GO:0021886"}


id: MONDO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dirofilariasis (obsolete MONDO:0005733)","termid":"MONDO:0005733","xrefs":{"Monarch":{"xref_id":"0005733"}}}


id: MONDO:0003003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An alveolar soft part sarcoma arising from the cervix.","definition_xrefs":["NCIT:C40225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alveolar soft part sarcoma","termid":"MONDO:0011655"},{"relation_name":"is_a","term_name":"sarcoma of cervix uteri","termid":"MONDO:0016280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical alveolar soft part sarcoma","secondary_identifiers":["MEDGEN:273905","UMLS:C1516408","DOID:4442"],"termid":"MONDO:0003003","xrefs":{"Monarch":{"xref_id":"0003003"}}}


id: MONDO:1010698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in dogs due to a mutation in the G6PC1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, G6PC1-related, dog","secondary_identifiers":["OMIA:000418-9615"],"synonyms":[{"name":"glycogen storage disease Ia, dog","type":"related"}],"termid":"MONDO:1010698","xrefs":{"Monarch":{"xref_id":"1010698"}}}


id: PBO:0087136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p); complex interacts with exosome to mediate 3'-end formation of some mRNAs, snRNAs, snoRNAs, and CUTs; required for termination of non-poly(A) transcripts and efficient splicing; Nrd1-Nab3 pathway appears to have a role in rapid suppression of some genes when cells are shifted to poor growth conditions, indicating role for Nrd1-Nab3 in regulating cellular response to nutrient availability","termid":"PBO:0087136"}


id: MONDO:0008658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete virus Rd114 RNA Complementarity (obsolete MONDO:0008658)","secondary_identifiers":["OMIM:193070"],"synonyms":[{"name":"virus Rd114 RNA Complementarity","type":"exact"}],"termid":"MONDO:0008658","xrefs":{"Monarch":{"xref_id":"0008658"}}}


id: MONDO:0017349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually slow growing, subcutaneous nodular neoplasm arising from myopericytes. It is composed of myoid cells arranged in a perivascular growth pattern. The vast majority of cases have a benign clinical course.","definition_xrefs":["NCIT:C50401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated mesenchymal tumor","termid":"MONDO:0017345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopericytoma","secondary_identifiers":["ONCOTREE:MPC","MESH:D000077777","Orphanet:289685","GARD:21152","ICDO:8713/1","UMLS:C1302808","MEDGEN:224912"],"synonyms":[{"name":"MPC","type":"related"},{"name":"hemangiopericytoma","type":"related"},{"name":"solitary myofibroma","type":"exact"}],"termid":"MONDO:0017349","xrefs":{"Monarch":{"xref_id":"0017349"}}}


id: GO:0016613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing a vanadium-iron cluster found in some species, such as Azotobacter vinelandii. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the vanadium-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.","definition_xrefs":["PMID:3474027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"vanadium-iron nitrogenase complex","synonyms":[{"name":"vanadium-iron nitrogenase activity","type":"related"}],"termid":"GO:0016613"}


id: PBO:0084773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein; probable minor component of the TOM (translocase of outer membrane) complex responsible for recognition and import of mitochondrially directed proteins; TOM71 has a paralog, TOM70, that arose from the whole genome duplication","termid":"PBO:0084773"}


id: PBO:0054541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1941","termid":"PBO:0054541"}


id: GO:1990893
data:
  {"annotated_genes":["SJAG_00646","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89771,113517],"is_not":false,"summary":null,"term":"GO:1990893"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromere chromatin structure is compacted prior to and during mitosis.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"mitotic chromosome centromere condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic chromosome condensation at kinetochore","type":"exact"}],"termid":"GO:1990893","terms_by_termid":{"GO:1990893":null}}


id: GO:0098752
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the cytoplasmic side of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of the cytoplasmic side of the plasma membrane (obsolete GO:0098752)","termid":"GO:0098752"}


id: PBO:0113236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic beta subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes N-linked glycosylation of newly synthesized proteins in the ER; forms a pocket with Ost2p involved in binding terminal glucose units of the donor glycan; human homolog DDOST can complement yeast growth defect during down-regulation of the yeast gene","termid":"PBO:0113236"}


id: PR:Q96WS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu15 gene.","definition_xrefs":["UniProtKB:Q96WS6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPJ732.03","synonyms":[{"name":"Spom972h-meu15","type":"exact"}],"termid":"PR:Q96WS6"}


id: PBO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ortholog_qualifier","termid":"PBO:0006210"}


id: FYPO:0001717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malonic acid into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal malonic acid import","synonyms":[{"name":"abnormal malonate import","type":"related"},{"name":"abnormal malonic acid import across plasma membrane","type":"exact"},{"name":"abnormal malonic acid import during mitotic cell cycle","type":"related"},{"name":"abnormal malonic acid import during vegetative growth","type":"exact"},{"name":"abnormal malonic acid import into cell","type":"exact"},{"name":"abnormal malonic acid uptake","type":"exact"}],"termid":"FYPO:0001717"}


id: MOD:01178
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to S-(aspart-4-yloxy) thiocarbonate.","definition_xrefs":["RESID:AA0432","PubMed:16627948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(aspart-4-yloxy) thiocarbonate","synonyms":[{"name":"(2S)-2-amino-4-(carboxysulfanyl)oxy-4-oxobutanoic acid","type":"exact"},{"name":"4-aspartyloxysulfanylcarbonate","type":"exact"},{"name":"AspOSCO2H","type":"exact"},{"name":"O-carboxysulfanyl-4-oxo-L-homoserine","type":"exact"},{"name":"S-(aspart-4-yloxy) thiocarbonate","type":"exact"}],"termid":"MOD:01178"}


id: PBO:0051695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit D","termid":"PBO:0051695"}


id: _global:exports
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the end location of c is part of the region that surrounds s.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"transports","termid":"_global:transports"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exports","secondary_identifiers":["RO:0002345","GOREL:0000035"],"termid":"_global:exports"}


id: PBO:0004280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec22 (predicted)","termid":"PBO:0004280"}


id: PBO:0031720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_genome_maintenance","termid":"PBO:0031720"}


id: PBO:0050340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 42","termid":"PBO:0050340"}


id: MONDO:0012075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodontia-cancer predisposition syndrome","secondary_identifiers":["OMIM:608615","GARD:17376","MESH:C563898","Orphanet:300576","UMLS:C1837750","MEDGEN:324868"],"synonyms":[{"name":"ODCRCS","type":"exact"},{"name":"autosomal dominant ectodermal dysplasia-cancer predisposition syndrome","type":"exact"},{"name":"oligodontia-cancer predisposition syndrome","type":"exact"},{"name":"oligodontia-colorectal cancer syndrome","type":"exact"},{"name":"tooth agenesis-colorectal cancer syndrome","type":"exact"}],"termid":"MONDO:0012075","xrefs":{"Monarch":{"xref_id":"0012075"}}}


id: PBO:0045687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 7","termid":"PBO:0045687"}


id: PBO:0062230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 3","termid":"PBO:0062230"}


id: GO:0055020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle fiber development","termid":"GO:0055018"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle cell differentiation","termid":"GO:2000727"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle fiber development","synonyms":[{"name":"activation of cardiac muscle fiber development","type":"narrow"},{"name":"positive regulation of cardiac muscle fibre development","type":"exact"},{"name":"positive regulation of heart muscle fiber development","type":"exact"},{"name":"stimulation of cardiac muscle fiber development","type":"narrow"},{"name":"up regulation of cardiac muscle fiber development","type":"exact"},{"name":"up-regulation of cardiac muscle fiber development","type":"exact"},{"name":"upregulation of cardiac muscle fiber development","type":"exact"}],"termid":"GO:0055020"}


id: GO:0050958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. Stimuli may be chemical, mechanical or electrical and interpreting these stimuli allows an organism to determine the orientation of a magnetic field. Magnetoreception also involves the perception of light; birds cannot orient without the presence of short wavelength (blue/green) light.","definition_xrefs":["Wikipedia:Magnetoception","GOC:ai","PMID:15886990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception","synonyms":[{"name":"magnetoception","type":"exact"},{"name":"sensory perception of magnetic field","type":"exact"}],"termid":"GO:0050958"}


id: PBO:0065575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone","termid":"PBO:0065575"}


id: PBO:0069650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 927, pseudogene","termid":"PBO:0069650"}


id: PBO:0077396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132D","termid":"PBO:0077396"}


id: GO:0006041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine metabolic process","synonyms":[{"name":"chitosamine metabolic process","type":"exact"},{"name":"chitosamine metabolism","type":"exact"},{"name":"glucosamine metabolism","type":"exact"}],"termid":"GO:0006041"}


id: GO:0030930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four identical subunits that possesses ADPG pyrophosphorylase activity. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"homotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030930"}


id: PBO:0058807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7849","termid":"PBO:0058807"}


id: PBO:0074246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 2","termid":"PBO:0074246"}


id: MOD:00720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxygenates an L-methionine residue to L-methionine sulfoxide R-diastereomer.","definition_xrefs":["PubMed:23911929","RESID:AA0581","PubMed:22116028","PubMed:21406390","ChEBI:45764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine (R)-sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"MOD_RES Methionine (R)-sulfoxide","type":"exact"},{"name":"R-MetO","type":"exact"}],"termid":"MOD:00720"}


id: PBO:0090214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,6-galactosyltransferase Gmh4","termid":"PBO:0090214"}


id: GO:0061643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of axon","termid":"GO:0061643"}


id: MONDO:0025303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder caused by infection with Anaplasma.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease","termid":"MONDO:0006922"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplasmosis","secondary_identifiers":["SCTID:13906002","NCIT:C128425","SCTID:427481004","MEDGEN:8053","ICD10CM:A79.82","ICD9:082.49","MESH:D000712","UMLS:C0002797"],"synonyms":[{"name":"anaplasma caused disease or disorder","type":"exact"},{"name":"anaplasma disease or disorder","type":"exact"},{"name":"anaplasma infectious disease","type":"exact"},{"name":"anaplasmoses","type":"exact"},{"name":"human anaplasmosis","type":"exact"}],"termid":"MONDO:0025303","xrefs":{"Monarch":{"xref_id":"0025303"}}}


id: GO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: myo-inositol(out) + Na+(out) = myo-inositol(in) + Na+(in).","definition_xrefs":["TC:2.A.21.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol transmembrane transporter activity","termid":"GO:0005365"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"myo-inositol:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-429663"],"synonyms":[{"name":"myo-inositol-sodium cotransporter activity","type":"broad"}],"termid":"GO:0005367"}


id: PBO:0048692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS family zinc finger 1","termid":"PBO:0048692"}


id: PBO:0041992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 38","termid":"PBO:0041992"}


id: PBO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Caj1/Djp1 type (predicted)","termid":"PBO:0002240"}


id: MONDO:0800464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders including Paget disease of bone (PBD), inclusion body myopathy (IBM), and less frequently frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS). Phenotypic presentation and severity are highly variable, and individuals within the same family may present with different associated conditions.","definition_xrefs":["PMID:33145792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"proteostasis deficiencies","termid":"MONDO:0021179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"SQSTM1-related multisystem proteinopathy","synonyms":[{"name":"SQSTM1-related multisystem proteinopathy","type":"exact"}],"termid":"MONDO:0800464","xrefs":{"Monarch":{"xref_id":"0800464"}}}


id: GO:0062084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["PMID:21917918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"regulates","term_name":"capsule polysaccharide biosynthetic process","termid":"GO:0045227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062084"}


id: GO:0050495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-glycine ethanolamide-linked phosphatide following hydrolysis of a glycyl-peptide bond, as in the cleavage of arginine from the carboxy-terminal of Apg8 followed by its amidation with phosphatidylethanolamine.","definition_xrefs":["RESID:AA0346"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glycyl-phosphatidylethanolamine biosynthetic process from peptidyl-glycine (obsolete GO:0050495)","synonyms":[{"name":"peptidyl-glycyl-phosphatidylethanolamine anabolism from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycyl-phosphatidylethanolamine formation from peptidyl-glycine","type":"exact"},{"name":"peptidyl-glycyl-phosphatidylethanolamine synthesis from peptidyl-glycine","type":"exact"}],"termid":"GO:0050495"}


id: FYPO:0008139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"dilated endoplasmic reticulum lumen","synonyms":[{"name":"dialted ER lumen","type":"exact"}],"termid":"FYPO:0008139"}


id: MONDO:0011850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 5","secondary_identifiers":["MEDGEN:334831","OMIM:607508","UMLS:C1843771"],"synonyms":[{"name":"Mgr5","type":"related"},{"name":"migraine with or without aura, susceptibility to, 5","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 5","type":"exact"}],"termid":"MONDO:0011850","xrefs":{"Monarch":{"xref_id":"0011850"}}}


id: PBO:0013078
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisC","termid":"PBO:0013078"}


id: PBO:0084268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p","termid":"PBO:0084268"}


id: GO:0141051
data:
  {"annotated_genes":["SJAG_03627","SJAG_04186","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[98996,111298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[79036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[111299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[111300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"}]},"cv_name":"molecular_function","definition":"Removal of an acetyl group from a lysine residue in a histone H4.","definition_xrefs":["PMID:12590135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity","termid":"GO:0004407"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03627":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0019213","GO:0003824","GO:0033558","GO:0140096"],"is_obsolete":false,"name":"histone H4K deacetylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0141051","terms_by_termid":{"GO:0034739":null,"GO:0046970":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null}}


id: SO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 25S_rRNA, which functions as a component of the large subunit of the ribosome in some eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_25S_gene","synonyms":[{"name":"25S rRNA gene","type":"exact"},{"name":"25S_rRNA_gene","type":"exact"}],"termid":"SO:0002242"}


id: GO:0102157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-3-sulfopropanediol(1-) + NAD = 2-oxo-3-hydroxy-propane-1-sulfonate + NADH + H+.","definition_xrefs":["PMID:20150239","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(R)-sulfopropanediol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11729"],"termid":"GO:0102157"}


id: MONDO:0033198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 106","secondary_identifiers":["GARD:22656","UMLS:C4539954","OMIM:617637","MEDGEN:1627111","DOID:0080261"],"synonyms":[{"name":"DFNB106","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 106","type":"narrow"},{"name":"deafness autosomal recessive 106","type":"narrow"},{"name":"deafness, autosomal recessive 106","type":"narrow"}],"termid":"MONDO:0033198","xrefs":{"Monarch":{"xref_id":"0033198"}}}


id: GO:0016312
data:
  {"annotated_genes":["SJAG_00063","SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004441"},{"annotations":[110121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol bisphosphate + H2O = myo-inositol phosphate + phosphate.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"inositol bisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6809561","Reactome:R-HSA-6809565","RHEA:57840"],"termid":"GO:0016312","terms_by_termid":{"GO:0004441":null,"GO:0030487":null}}


id: MOD:02065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-alanine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"}


id: GO:0031557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process which directly activates any of the steps required for programmed cell death as a result of a chemical stimulus.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of programmed cell death in response to chemical stimulus (obsolete GO:0031557)","synonyms":[{"name":"induction of programmed cell death in response to chemical stimulus","type":"exact"},{"name":"induction of programmed cell death in response to chemical substance","type":"exact"}],"termid":"GO:0031557"}


id: GO:0035347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of hypoxanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of hypoxanthine transport","termid":"GO:0035345"},{"relation_name":"negatively_regulates","term_name":"hypoxanthine transport","termid":"GO:0035344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hypoxanthine transport","synonyms":[{"name":"negative regulation of 6-hydroxypurine transport","type":"exact"}],"termid":"GO:0035347"}


id: PBO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embigin","termid":"PBO:0046259"}


id: GO:0019126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-serine.","definition_xrefs":["RESID:AA0195"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine racemization (obsolete GO:0019126)","termid":"GO:0019126"}


id: FYPO:0005862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MTREC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:26942678","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished MTREC complex binding","synonyms":[{"name":"MTREC complex binding abolished","type":"exact"},{"name":"abolished NURS complex binding","type":"exact"}],"termid":"FYPO:0005862"}


id: PBO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC1 like intracellular cholesterol transporter 1","termid":"PBO:0061299"}


id: PBO:0042350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD84 molecule","termid":"PBO:0042350"}


id: PBO:0079448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 upstream neural differentiation-associated RNA","termid":"PBO:0079448"}


id: MONDO:0013177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital muscular dystrophy with integrin alpha-7 deficiency is a rare, genetic, congenital muscular dystrophy due to extracellular matrix protein anomaly characterized by early motor development delay and muscle weakness with mild elevation of serum creatine kinase, that may be followed by progressive disease course with predominantly proximal muscle weakness and atrophy, motor development regress, scoliosis and respiratory insufficiency.","definition_xrefs":["Orphanet:34520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy due to integrin alpha-7 deficiency","secondary_identifiers":["OMIM:613204","UMLS:C2750786","MESH:C567709","GARD:12587","DOID:0110639","MEDGEN:413044"],"synonyms":[{"name":"ITGA7 congenital muscular dystrophy","type":"exact"},{"name":"congenital muscular dystrophy caused by mutation in ITGA7","type":"exact"},{"name":"congenital muscular dystrophy with ITGA7 deficiency","type":"exact"},{"name":"congenital muscular dystrophy with integrin alpha-7 deficiency","type":"exact"},{"name":"congenital myopathy due to integrin alpha-7 deficiency","type":"exact"},{"name":"muscular dystrophy, congenital, due to ITGA7 deficiency","type":"related"},{"name":"muscular dystrophy, congenital, due to integrin ALPHA-7 deficiency","type":"related"},{"name":"myopathy, congenital, due to integrin Alpha-7 deficiency","type":"related"}],"termid":"MONDO:0013177","xrefs":{"Monarch":{"xref_id":"0013177"}}}


id: GO:0050932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pigmented cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pigment cell differentiation","termid":"GO:0050932"}


id: PBO:0040990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2B","termid":"PBO:0040990"}


id: PBO:0048210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma3","termid":"PBO:0048210"}


id: PBO:0001571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3-phosphatase, myotubularin family (predicted)","termid":"PBO:0001571"}


id: PBO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion associated, oncogene regulated","termid":"PBO:0042582"}


id: GO:0032588
data:
  {"annotated_genes":["SJAG_00296","SJAG_03953","SJAG_02912","SJAG_05330","SJAG_02168"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92505,92986,94996,97510,109181],"is_not":false,"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"trans-Golgi network","termid":"GO:0005802"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_02168":null,"SJAG_02912":null,"SJAG_03953":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"trans-Golgi network membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi trans face membrane","type":"related"},{"name":"trans Golgi network membrane","type":"exact"}],"termid":"GO:0032588","terms_by_termid":{"GO:0032588":null}}


id: SO:1000104
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000104 sequence_variant_increasing_level_of_translation_product (obsolete SO:1000104)","synonyms":[{"name":"mutationt increasing level of translation product","type":"related"},{"name":"sequence variant increasing level of translation product","type":"exact"}],"termid":"SO:1000104"}


id: PBO:0088000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Cx(9)C protein involved in cytochrome c oxidase organization; organization includes assembly or stability; localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; interacts genetically with CYC1 and with cytochrome c oxidase assembly factors","termid":"PBO:0088000"}


id: FYPO:0008255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a lower extent than normal in regions containing protein-coding genes.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K4 acetylation at protein coding gene during vegetative growth","termid":"FYPO:0008255"}


id: MONDO:0021856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive, oculo-reno-skeletal syndrome characterized by bilateral atypical macular coloboma, familial juvenile nephronophthisis and mesomelic skeletal dysplasia of upper limbs with bilateral radiohumeral fusion.","definition_xrefs":["PMID:3231430"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"coloboma","termid":"MONDO:0001476"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Alsing syndrome","secondary_identifiers":["MESH:C536588","MEDGEN:444013","UMLS:C2931255"],"synonyms":[{"name":"atypical macular coloboma, familial juvenile nephronophthisis and skeletal abnormality","type":"related"}],"termid":"MONDO:0021856","xrefs":{"Monarch":{"xref_id":"0021856"}}}


id: GO:0015848
data:
  {"annotated_genes":["SJAG_02344","SJAG_02125","SJAG_02059","SJAG_02060","SJAG_03817"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70394,62337,62361,70491,57979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"}]},"cv_name":"biological_process","definition":"The directed movement of spermidine, N-(3-aminopropyl)-1,4-diaminobutane, a polyamine formed by the transfer of a propylamine group from decarboxylated S-adenosylmethionine to putrescine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_03817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"spermidine transport","references_by_uniquename":{"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0015848","terms_by_termid":{"GO:1903711":null}}


id: PBO:0057247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 450a-1","termid":"PBO:0057247"}


id: GO:0032239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of nucleobase-containing compound transport","synonyms":[{"name":"regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"}],"termid":"GO:0032239"}


id: GO:0008737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fuculose + ATP = L-fuculose 1-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.51","RHEA:12376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"L-fuculokinase activity","secondary_identifiers":["MetaCyc:FUCULOKIN-RXN","KEGG_REACTION:R03241"],"synonyms":[{"name":"ATP:L-fuculose 1-phosphotransferase activity","type":"related"},{"name":"L-fuculokinase (phosphorylating)","type":"related"},{"name":"L-fuculose kinase activity","type":"related"}],"termid":"GO:0008737"}


id: MOD:00839
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing deuteriumm, (2)H.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2)H deuterium labeled residue","termid":"MOD:00839"}


id: PBO:0063202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP1 antisense RNA 1","termid":"PBO:0063202"}


id: MONDO:0020784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short sleep, familial natural, 1 (obsolete MONDO:0020784)","secondary_identifiers":["OMIM:612975"],"synonyms":[{"name":"FNSS1","type":"related"},{"name":"SHORT SLEEP, FAMILIAL NATURAL, 1","type":"related"},{"name":"Short Sleep Phenotype","type":"related"},{"name":"short sleep, familial natural, 1","type":"exact"}],"termid":"MONDO:0020784","xrefs":{"Monarch":{"xref_id":"0020784"}}}


id: MONDO:0023663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete macrocephaly mesodermal hamartoma spectrum (obsolete MONDO:0023663)","secondary_identifiers":["MESH:C537716"],"synonyms":[{"name":"Elattoproteus syndrome","type":"related"},{"name":"gigantism, partial, of hands and feet, nevi, hemihypertrophy, and macrocephaly","type":"related"},{"name":"hemihypertrophy and macrocephaly","type":"related"},{"name":"partial gigantism of hands and feet, nevi, hemihypertrophy, macrocephaly","type":"related"}],"termid":"MONDO:0023663","xrefs":{"Monarch":{"xref_id":"0023663"}}}


id: PBO:0017762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf1","termid":"PBO:0017762"}


id: GO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of red or far-red light signaling pathway","termid":"GO:0090227"},{"relation_name":"positively_regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of red or far-red light signaling pathway","synonyms":[{"name":"positive regulation of phytochrome signaling pathway","type":"exact"},{"name":"positive regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090228"}


id: PBO:0040887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP8B antisense RNA 1","termid":"PBO:0040887"}


id: SO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes a C_D_box_snoRNA. Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.","definition_xrefs":["PMID:12457565","PMID:22065625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_gene","synonyms":[{"name":"box C/D snoRNA gene, C D box snoRNA gene, C/D box snoRNA gene","type":"exact"}],"termid":"SO:0002375"}


id: PBO:0055267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2694","termid":"PBO:0055267"}


id: FYPO:0005345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation begins during interphase of the cell cycle.","definition_xrefs":["PomBase:mah","PMID:9808627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic sister chromatid separation","termid":"FYPO:0000416"},{"relation_name":"is_a","term_name":"mitotic sister chromatid separation in absence of mitotic spindle","termid":"FYPO:0007125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mitotic sister chromatid separation during interphase","synonyms":[{"name":"advanced mitotic sister chromatid separation during interphase","type":"exact"},{"name":"chromosome separation during interphase during vegetative growth","type":"exact"},{"name":"mitotic chromosome separation during interphase","type":"exact"},{"name":"premature mitotic sister chromatid separation during interphase","type":"exact"},{"name":"premature sister chromatid separation during interphase of mitotic cell cycle","type":"related"},{"name":"sister chromatid separation during mitotic interphase","type":"exact"}],"termid":"FYPO:0005345"}


id: PBO:0060019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 7","termid":"PBO:0060019"}


id: MONDO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm that arises from the rectum. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum sarcoma","termid":"MONDO:0002168"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectum leiomyosarcoma","secondary_identifiers":["UMLS:C1335683","DOID:5297","MEDGEN:233391"],"synonyms":[{"name":"leiomyosarcoma of rectum","type":"exact"},{"name":"leiomyosarcoma of the rectum","type":"exact"},{"name":"rectal leiomyosarcoma","type":"exact"},{"name":"rectum leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003379","xrefs":{"Monarch":{"xref_id":"0003379"}}}


id: GO:0009986
data:
  {"annotated_genes":["SJAG_00310","SJAG_02260","SJAG_02711","SJAG_02076","SJAG_02192","SJAG_01755","SJAG_04238","SJAG_03295","SJAG_01017","SJAG_04789","SJAG_04851","SJAG_01975","SJAG_01861","SJAG_00981","SJAG_04723","SJAG_04209","SJAG_02173","SJAG_02916","SJAG_00218","SJAG_04720","SJAG_00784","SJAG_01835","SJAG_03204","SJAG_00485","SJAG_01029","SJAG_02131","SJAG_05272","SJAG_03640","SJAG_01290","SJAG_04685","SJAG_04850","SJAG_02959","SJAG_00415","SJAG_02435","SJAG_00667","SJAG_04864","SJAG_00096","SJAG_03521","SJAG_00109","SJAG_02649","SJAG_04398","SJAG_01086","SJAG_00340","SJAG_00239","SJAG_03824","SJAG_02580","SJAG_03998","SJAG_02093","SJAG_04875","SJAG_00254","SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67776,73009,75776,78120,79601,81766,89346,89347,89832,93632,94949,97482,97886,97887,98712,105032,105096,108094,117426],"is_not":false,"summary":null,"term":"GO:0009986"},{"annotations":[90459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010339"},{"annotations":[108668,118408,104771,104517,104770],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[114866,91695,116592,115578,120639,97060,96630,119627,96618,117444,96631,118111,96632,105794,58689,91889,65167,104043,104042,104035,95821,108367,119187,116216,116315,120202],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009897"}]},"cv_name":"cellular_component","definition":"The external part of the cell wall and/or plasma membrane.","definition_xrefs":["GOC:sm","GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00415":null,"SJAG_00485":null,"SJAG_00667":null,"SJAG_00781":null,"SJAG_00784":null,"SJAG_00981":null,"SJAG_01017":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01290":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01861":null,"SJAG_01975":null,"SJAG_02076":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02173":null,"SJAG_02192":null,"SJAG_02260":null,"SJAG_02435":null,"SJAG_02580":null,"SJAG_02649":null,"SJAG_02711":null,"SJAG_02916":null,"SJAG_02959":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03521":null,"SJAG_03640":null,"SJAG_03824":null,"SJAG_03998":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04398":null,"SJAG_04685":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04864":null,"SJAG_04875":null,"SJAG_05272":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell surface","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0009928","GO:0009929"],"synonyms":[{"name":"cell associated","type":"exact"},{"name":"cell bound","type":"exact"}],"termid":"GO:0009986","terms_by_termid":{"GO:0009897":null,"GO:0009986":null,"GO:0010339":null,"GO:0070263":null}}


id: PBO:0053841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1107","termid":"PBO:0053841"}


id: GO:0061088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of sequestering of zinc ion (obsolete GO:0061088)","termid":"GO:0061088"}


id: PBO:0049500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 7","termid":"PBO:0049500"}


id: PBO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-1","termid":"PBO:0051424"}


id: MONDO:1012964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, non-human animal","termid":"MONDO:1012964","xrefs":{"Monarch":{"xref_id":"1012964"}}}


id: PBO:0080047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 20","termid":"PBO:0080047"}


id: PBO:0076664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thromboxane A synthase 1","termid":"PBO:0076664"}


id: MONDO:0004634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vein.","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vein disorder","secondary_identifiers":["MEDGEN:115992","NCIT:C35279","ICD9:453","SCTID:90507008","DOID:866","UMLS:C0235522"],"synonyms":[{"name":"disease of vein","type":"exact"},{"name":"disease or disorder of vein","type":"exact"},{"name":"disorder of vein","type":"exact"},{"name":"vein disease","type":"exact"},{"name":"vein disease or disorder","type":"exact"}],"termid":"MONDO:0004634","xrefs":{"Monarch":{"xref_id":"0004634"}}}


id: MONDO:0600027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serious heritable structural anomalies of the right side of the heart, including pulmonary atresia, tricuspid valve disease and Ebstein's anomaly, and right ventricular outflow tract obstruction and/or pulmonary stenosis, that are present from birth.","definition_xrefs":["EFO:0600032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital right-sided heart lesions","termid":"MONDO:0600027","xrefs":{"Monarch":{"xref_id":"0600027"}}}


id: PBO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: GO:0048316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the seed over time, from its formation to the mature structure. A seed is a propagating organ formed in the sexual reproductive cycle of gymnosperms and angiosperms, consisting of a protective coat enclosing an embryo and food reserves.","definition_xrefs":["GOC:jid","PO:0009010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed development","termid":"GO:0048316"}


id: PBO:0064143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N3","termid":"PBO:0064143"}


id: FYECO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for up to 24 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth <24 hrs","synonyms":[{"name":"growth <24 hours","type":"exact"},{"name":"overnight culture","type":"related"}],"termid":"FYECO:0000216"}


id: PBO:0080429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 13","termid":"PBO:0080429"}


id: MONDO:0018969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniorachischisis is the most severe form of neural tube defect in which both the brain and spinal cord remain open to varying degrees. It is a very rare congenital malformation of the central nervous system.","definition_xrefs":["Orphanet:63260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"craniorachischisis","secondary_identifiers":["UMLS:C0152426","ICD10CM:Q00.1","HP:0030770","icd11.foundation:675690362","SCTID:32219008","MedDRA:10011321","GARD:10504","MEDGEN:56290","NCIT:C98907","ICD9:740.1"],"synonyms":[{"name":"cranial rachischisis","type":"exact"},{"name":"craniorachischisis","type":"exact"},{"name":"craniorachischisis (disease)","type":"exact"}],"termid":"MONDO:0018969","xrefs":{"Monarch":{"xref_id":"0018969"}}}


id: PBO:0074683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63E","termid":"PBO:0074683"}


id: PBO:0084483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific component of the spindle pole body; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane (PSM) during meiosis II; required for PSM growth and closure; DON1 has a paralog, CUE5, that arose from the whole genome","termid":"PBO:0084483"}


id: PBO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108F (pseudogene)","termid":"PBO:0044817"}


id: PBO:0079104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC complex subunit 2","termid":"PBO:0079104"}


id: MONDO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tibial adamantinoma (obsolete MONDO:0003854)","termid":"MONDO:0003854","xrefs":{"Monarch":{"xref_id":"0003854"}}}


id: FYPO:0000897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0000266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial fission","synonyms":[{"name":"normal mitochondrial division","type":"exact"},{"name":"normal mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial fission during vegetative growth","type":"exact"},{"name":"normal mitochondrial proliferation","type":"related"}],"termid":"FYPO:0000897"}


id: GO:0009865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the pollen tube adheres to cells of the stigma and style.","definition_xrefs":["GOC:tair_curators","PMID:12602877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"},{"relation_name":"part_of","term_name":"pollen tube development","termid":"GO:0048868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"pollen tube adhesion","termid":"GO:0009865"}


id: PBO:0029692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_single_irregular_mass","termid":"PBO:0029692"}


id: GO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous antigen","termid":"GO:0019884"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen","synonyms":[{"name":"exogenous peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002478"}


id: GO:0052375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism avoids the effects of nitric oxide produced as a defense response by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance by organism of symbiont-produced nitric oxide (obsolete GO:0052375)","synonyms":[{"name":"evasion or tolerance by organism of symbiont NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced NO","type":"exact"},{"name":"evasion or tolerance by organism of symbiont-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance of NO produced by symbiont in response to organism","type":"exact"},{"name":"evasion or tolerance of nitric oxide produced by symbiont in response to organism","type":"exact"}],"termid":"GO:0052375"}


id: GO:0009246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the enterobacterial common antigen, an acidic polysaccharide containing N-acetyl-D-glucosamine, N-acetyl-D-mannosaminouronic acid, and 4-acetamido-4,6-dideoxy-D-galactose. A major component of the cell wall outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"enterobacterial common antigen metabolic process","termid":"GO:0046378"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"enterobacterial common antigen biosynthetic process","secondary_identifiers":["MetaCyc:ECASYN-PWY"],"synonyms":[{"name":"enterobacterial common antigen anabolism","type":"exact"},{"name":"enterobacterial common antigen biosynthesis","type":"exact"},{"name":"enterobacterial common antigen formation","type":"exact"},{"name":"enterobacterial common antigen synthesis","type":"exact"}],"termid":"GO:0009246"}


id: SO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the inactivation of a catalytic site with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inactive_ligand_binding_site","termid":"SO:0001560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive_catalytic_site","synonyms":[{"name":"inactive catalytic site","type":"exact"}],"termid":"SO:0001618"}


id: PBO:0061954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 7","termid":"PBO:0061954"}


id: PBO:0069924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1216, pseudogene","termid":"PBO:0069924"}


id: PBO:0060843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament medium chain","termid":"PBO:0060843"}


id: GO:0034037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a purine ribonucleoside bisphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:pde","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside bisphosphate catabolic process","synonyms":[{"name":"purine ribonucleoside bisphosphate breakdown","type":"exact"},{"name":"purine ribonucleoside bisphosphate catabolism","type":"exact"},{"name":"purine ribonucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034037"}


id: GO:0000836
data:
  {"annotated_genes":["SJAG_03841","SJAG_04384","SJAG_01134","SJAG_03345","SJAG_01709","SJAG_01051","SJAG_05274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91028,105762,106619,107100,109484,111388,119003],"is_not":false,"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal and membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p. In mammals, this complex contains the ubiquitin ligase HRD1 (Synoviolin) or AMFR (gp78).","definition_xrefs":["PMID:16873066","PMID:16619026","GOC:bf","PMID:21454652","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005789","GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HRD1 ubiquitin ligase complex","type":"related"}],"termid":"GO:0000836","terms_by_termid":{"GO:0000836":null}}


id: PBO:0058527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6072","termid":"PBO:0058527"}


id: MONDO:0700190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant lymphoma that arises in the bursa of Fabricius in a chicken.","definition_xrefs":["NCIT:C134556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chicken lymphoma","termid":"MONDO:0700194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken bursal lymphoma","termid":"MONDO:0700190","xrefs":{"Monarch":{"xref_id":"0700190"}}}


id: PBO:0044765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 49","termid":"PBO:0044765"}


id: SO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed_pseudogene overlapped by locus-specific evidence of transcription.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_processed_pseudogene","synonyms":[{"name":"transcribed processed pseudogene","type":"exact"}],"termid":"SO:0002109"}


id: PBO:0070927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 35","termid":"PBO:0070927"}


id: PBO:0042538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK6 antisense RNA 1","termid":"PBO:0042538"}


id: GO:0051039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription as part of a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in meiotic cell cycle (obsolete GO:0051039)","synonyms":[{"name":"activation of transcription during meiosis","type":"narrow"},{"name":"positive regulation of meiotic transcription","type":"exact"},{"name":"positive regulation of transcription, meiotic","type":"exact"},{"name":"stimulation of transcription during meiosis","type":"narrow"},{"name":"up regulation of transcription during meiosis","type":"exact"},{"name":"up-regulation of transcription during meiosis","type":"exact"},{"name":"upregulation of transcription during meiosis","type":"exact"}],"termid":"GO:0051039"}


id: PBO:0085913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; YJL118W is a non-essential gene; deletion enhances the toxicity of heterologously expressed human alpha-synuclein","termid":"PBO:0085913"}


id: GO:0097165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense aggregation in the nucleus composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["GOC:ans","PMID:10359787","PMID:12865437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear stress granule","termid":"GO:0097165"}


id: PBO:0052119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily D member 2","termid":"PBO:0052119"}


id: MONDO:1012519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lethal acrodermatitis, non-human animal","termid":"MONDO:1011763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal acrodermatitis, dog","secondary_identifiers":["OMIA:002146-9615"],"termid":"MONDO:1012519","xrefs":{"Monarch":{"xref_id":"1012519"}}}


id: RO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intracellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intracellular_endoparasite","termid":"RO:0002641"}


id: GO:0043409
data:
  {"annotated_genes":["SJAG_05000","SJAG_02000","SJAG_04522","SJAG_02392","SJAG_04825","SJAG_03263","SJAG_03185","SJAG_00975","SJAG_02013","SJAG_03893","SJAG_01114","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108856,101222,120182,97632,109423,105596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[96815,101224,118927,93440,120183,97754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[108949,89973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01114":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of MAPK cascade","type":"exact"},{"name":"down regulation of MAPKKK cascade","type":"exact"},{"name":"down-regulation of MAPK cascade","type":"exact"},{"name":"down-regulation of MAPKKK cascade","type":"exact"},{"name":"downregulation of MAPK cascade","type":"exact"},{"name":"downregulation of MAPKKK cascade","type":"exact"},{"name":"inhibition of MAPK cascade","type":"narrow"},{"name":"inhibition of MAPKKK cascade","type":"narrow"},{"name":"negative regulation of MAP kinase cascade","type":"exact"},{"name":"negative regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of MAPKKK cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043409","terms_by_termid":{"GO:0180040":null,"GO:1903138":null,"GO:1903753":null}}


id: MONDO:0033564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 8","secondary_identifiers":["UMLS:C5436597","GARD:18498","OMIM:619009","MEDGEN:1776094"],"synonyms":[{"name":"OOCYTE MATURATION DEFECT 8","type":"related"},{"name":"OOMD8","type":"related"}],"termid":"MONDO:0033564","xrefs":{"Monarch":{"xref_id":"0033564"}}}


id: PBO:0030143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-thialysine","termid":"PBO:0030143"}


id: PBO:0079000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (AGT) 7-1","termid":"PBO:0079000"}


id: GO:0009212
data:
  {"annotated_genes":["SJAG_04627","SJAG_04657","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109071],"is_not":false,"summary":null,"term":"GO:0009212"},{"annotations":[94211,70149,72720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate biosynthetic process","termid":"GO:0009148"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009212","terms_by_termid":{"GO:0006235":null,"GO:0009212":null}}


id: PBO:0046649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase A4","termid":"PBO:0046649"}


id: MONDO:0006106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign mesenchymal neoplasm arising from smooth muscle tissue.","definition_xrefs":["NCIT:C6510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign muscle neoplasm","termid":"MONDO:0003061"},{"relation_name":"is_a","term_name":"smooth muscle tumor","termid":"MONDO:0006975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign smooth muscle neoplasm","secondary_identifiers":["UMLS:C1332539","MEDGEN:231944","EFO:1000121"],"synonyms":[{"name":"benign neoplasm of smooth muscle","type":"exact"},{"name":"benign neoplasm of the smooth muscle","type":"exact"},{"name":"benign smooth muscle neoplasm","type":"exact"},{"name":"benign smooth muscle tumor","type":"exact"},{"name":"benign smooth muscle tumour","type":"exact"},{"name":"benign tumor of smooth muscle","type":"exact"},{"name":"benign tumor of the smooth muscle","type":"exact"},{"name":"benign tumour of smooth muscle","type":"exact"},{"name":"benign tumour of the smooth muscle","type":"exact"},{"name":"smooth muscle tissue benign neoplasm","type":"exact"}],"termid":"MONDO:0006106","xrefs":{"Monarch":{"xref_id":"0006106"}}}


id: PBO:0002700
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possibly related to human/mouse periphilin","termid":"PBO:0002700"}


id: GO:0010189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin E metabolic process","termid":"GO:0042360"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin E biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1422"],"synonyms":[{"name":"alpha-tocopherol biosynthesis","type":"narrow"},{"name":"alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"tocopherol biosynthesis","type":"exact"},{"name":"tocopherol biosynthetic process","type":"exact"},{"name":"vitamin E anabolism","type":"exact"},{"name":"vitamin E biosynthesis","type":"exact"},{"name":"vitamin E formation","type":"exact"},{"name":"vitamin E synthesis","type":"exact"}],"termid":"GO:0010189"}


id: PBO:0059343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S10 pseudogene 2","termid":"PBO:0059343"}


id: PBO:0028675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_subtelomeric_heterochromatin","termid":"PBO:0028675"}


id: GO:0039006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a pronephric nephron tubule from unspecified parts. A pronephric nephron tubule is an epithelial tube that is part of a nephron in the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule formation","termid":"GO:0072079"},{"relation_name":"part_of","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"part_of","term_name":"pronephros formation","termid":"GO:0072116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron tubule formation","synonyms":[{"name":"pronephric tubule formation","type":"exact"},{"name":"pronephros tubule formation","type":"exact"}],"termid":"GO:0039006"}


id: MONDO:0010909
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88513],"is_not":false,"summary":null,"term":"MONDO:0010909"}]},"cv_name":"mondo","definition":"Any UV-sensitive syndrome in which the cause of the disease is a mutation in the ERCC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UV-sensitive syndrome","termid":"MONDO:0015797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0021190","MONDO:0006025"],"is_obsolete":false,"name":"UV-sensitive syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15320","OMIM:600630","NCIT:C173106","UMLS:C3551173","MEDGEN:764087"],"synonyms":[{"name":"ERCC6 UV-sensitive syndrome","type":"exact"},{"name":"UV-sensitive syndrome 1","type":"exact"},{"name":"UV-sensitive syndrome caused by mutation in ERCC6","type":"exact"},{"name":"UV-sensitive syndrome type 1","type":"exact"},{"name":"UVSS1","type":"related"}],"termid":"MONDO:0010909","terms_by_termid":{"MONDO:0010909":null},"xrefs":{"Monarch":{"xref_id":"0010909"}}}


id: GO:0160149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(65) in tRNA = pseudouridine(65) in tRNA.","definition_xrefs":["EC:5.4.99.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA pseudouridine(65) synthase activity","secondary_identifiers":["RHEA:42536"],"termid":"GO:0160149"}


id: PBO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing possible. Evidence of transcript missing final intron","termid":"PBO:0001642"}


id: MONDO:0010961
data:
  {"annotated_genes":["SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86940],"is_not":false,"summary":null,"term":"MONDO:0010961"}]},"cv_name":"mondo","definition":"Prohormone convertase-I deficiency is the rarest form of monogenic obesity. The disorder is characterized by severe childhood obesity, hypoadrenalism, reactive hypoglycaemia, and elevated circulating levels of certain prohormones.","definition_xrefs":["Orphanet:71528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"inherited obesity","termid":"MONDO:0019182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"obesity due to prohormone convertase I deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1833053","SCTID:722053001","DOID:0111698","OMIM:600955","MESH:C563423","NORD:109523","MEDGEN:318777","GARD:16689"],"synonyms":[{"name":"PCI deficiency","type":"exact"},{"name":"PCSK1 Deficiency","type":"exact"},{"name":"obesity and endocrinopathy due to impaired processing of prohormones","type":"related"},{"name":"obesity with impaired prohormone processing","type":"exact"},{"name":"proprotein convertase 1/3 deficiency","type":"related"}],"termid":"MONDO:0010961","terms_by_termid":{"MONDO:0010961":null},"xrefs":{"Monarch":{"xref_id":"0010961"}}}


id: MONDO:0005253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High-output heart failure is a heart condition that occurs when the cardiac output is higher than normal.","definition_xrefs":["EFO:0003145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"high output heart failure","secondary_identifiers":["MEDGEN:526135","ICD10CM:I50.83","UMLS:C0221045","Wikipedia:High-output_cardiac_failure","SCTID:10091002"],"termid":"MONDO:0005253","xrefs":{"Monarch":{"xref_id":"0005253"}}}


id: GO:0021780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a glial cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"glial cell fate commitment","termid":"GO:0021781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate specification","termid":"GO:0021780"}


id: FYPO:0003326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal interphase microtubule nucleation","synonyms":[{"name":"normal interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"normal microtubule nucleation during interphase during vegetative growth","type":"exact"},{"name":"normal microtubule nucleation during interphase of mitotic cell cycle","type":"related"},{"name":"normal microtubule nucleation during mitotic interphase","type":"exact"}],"termid":"FYPO:0003326"}


id: MONDO:0009025
data:
  {"annotated_genes":["SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86917],"is_not":false,"summary":null,"term":"MONDO:0009025"}]},"cv_name":"mondo","definition":"Apparent mineralocorticoid excess (AME) is a rare form of pseudohyperaldosteronism characterized by very early-onset and severe hypertension, associated with low renin levels and hypoaldosteronism.","definition_xrefs":["Orphanet:320"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adrenal gland hyperfunction","termid":"MONDO:0006640"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic hypertension (obsolete MONDO:0015512)","termid":"MONDO:0015512"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"is_a","term_name":"steroid inherited metabolic disorder","termid":"MONDO:0005523"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01036":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"apparent mineralocorticoid excess","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1737310323","MESH:C537422","NCIT:C131083","SCTID:237770005","DOID:4367","NANDO:2100130","OMIM:218030","NCIT:C123231","DOID:0090121","UMLS:C0342488","GARD:433","MESH:D043204","SCTID:703256004","ICD9:255.3","NANDO:2200362","MEDGEN:90983"],"synonyms":[{"name":"11 Beta-hydroxysteroid dehydrogenase type 2 deficiency","type":"exact"},{"name":"11-beta-hydroxysteroid dehydrogenase deficiency type 2","type":"exact"},{"name":"AME","type":"related"},{"name":"AME 1","type":"related"},{"name":"APE","type":"exact"},{"name":"Ame1","type":"related"},{"name":"Ulick syndrome","type":"exact"},{"name":"apparent mineralocorticoid EXCESS","type":"related"},{"name":"apparent mineralocorticoid excess","type":"exact"},{"name":"apparent mineralocorticoid excess syndrome","type":"exact"},{"name":"cortisol 11-Beta-ketoreductase deficiency","type":"related"},{"name":"cortisol 11-beta-ketoreductase deficiency","type":"exact"},{"name":"syndrome of apparent mineralocorticoid Excess","type":"exact"}],"termid":"MONDO:0009025","terms_by_termid":{"MONDO:0009025":null},"xrefs":{"Monarch":{"xref_id":"0009025"}}}


id: MONDO:0024376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep disorder, initiating and maintaining sleep","secondary_identifiers":["MEDGEN:43897","UMLS:C0021603","SCTID:194437008"],"synonyms":[{"name":"disorders of initiating and maintaining sleep","type":"exact"}],"termid":"MONDO:0024376","xrefs":{"Monarch":{"xref_id":"0024376"}}}


id: PBO:0042570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein","termid":"PBO:0042570"}


id: GO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acylsphing-4-enine + ATP = ADP + an N-acylsphing-4-enine 1-phosphate + H+.","definition_xrefs":["EC:2.7.1.138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"ceramide kinase activity","secondary_identifiers":["Reactome:R-HSA-1638845","MetaCyc:CERAMIDE-KINASE-RXN","RHEA:17929"],"synonyms":[{"name":"ATP:ceramide 1-phosphotransferase activity","type":"related"},{"name":"acylsphingosine kinase activity","type":"related"}],"termid":"GO:0001729"}


id: GO:0008009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["Wikipedia:Chemokine","GOC:rl","PMID:12183377","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine activity","termid":"GO:0005125"},{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0005488","GO:0140677","GO:0005515"],"is_obsolete":false,"name":"chemokine activity","termid":"GO:0008009"}


id: MONDO:0014381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive familial intrahepatic cholestasis in which the cause of the disease is a mutation in the TJP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 4","secondary_identifiers":["OMIM:615878","GARD:9803","MEDGEN:418976","MONDO:0018803","UMLS:C2931067","DOID:0070224","NANDO:1201046","Orphanet:480483"],"synonyms":[{"name":"PFIC4","type":"exact"},{"name":"TJP2 deficit","type":"exact"},{"name":"TJP2 progressive familial intrahepatic cholestasis","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic 4","type":"related"},{"name":"cholestasis, progressive familial intrahepatic, 4","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, type 4","type":"exact"},{"name":"progressive familial intrahepatic cholestasis 4","type":"related"},{"name":"progressive familial intrahepatic cholestasis caused by mutation in TJP2","type":"exact"},{"name":"progressive familial intrahepatic cholestasis type 4","type":"exact"}],"termid":"MONDO:0014381","xrefs":{"Monarch":{"xref_id":"0014381"}}}


id: MONDO:0018128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phalangeal microgeodic syndrome is a rare primary osteolysis characterized by multiple small osteolytic areas and sclerosis in the phalanges of one or both hands associated with swelling and redness of the phalanges. Condition is benign, self-limited and may be associated with cold exposure.","definition_xrefs":["Orphanet:352636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phalangeal microgeodic syndrome","secondary_identifiers":["GARD:21524","UMLS:C4749465","MEDGEN:1658987"],"synonyms":[{"name":"phalangeal osteolysis","type":"exact"}],"termid":"MONDO:0018128","xrefs":{"Monarch":{"xref_id":"0018128"}}}


id: SO:0000175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 10-bp upstream of the start point of bacterial transcription units which may be involved in binding RNA polymerase; consensus=TAtAaT. This region is associated with sigma factor 70.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma_70_element","termid":"SO:0001671"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma_ecf_element","termid":"SO:0001913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_10_signal","secondary_identifiers":["http://en.wikipedia.org/wiki/Pribnow_box"],"synonyms":[{"name":"-10 signal","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:minus_10_signal","type":"exact"},{"name":"Pribnow Schaller box","type":"exact"},{"name":"Pribnow box","type":"exact"},{"name":"Pribnow-Schaller box","type":"exact"},{"name":"minus 10 signal","type":"exact"}],"termid":"SO:0000175"}


id: PBO:0040523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-azacytidine induced 2","termid":"PBO:0040523"}


id: GO:0051967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, glutamatergic","synonyms":[{"name":"down regulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"down-regulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"downregulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"inhibition of synaptic transmission, glutamatergic","type":"narrow"}],"termid":"GO:0051967"}


id: PBO:0111838
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain","termid":"PBO:0111838"}


id: MONDO:0012534
data:
  {"annotated_genes":["SJAG_03461"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87596],"is_not":false,"summary":null,"term":"MONDO:0012534"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 4 is a rare mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by a neonatal onset of severe metabolic acidosis and respiratory distress, persistent lactic acidosis with episodes of metabolic crises, developmental regression, microcephaly, abnormal gaze fixation and pursuit, axial hypotonia with limb spasticity and reduced spontaneous movements. Neuroimaging studies reveal polymicrogyria, white matter abnormalities and multiple cystic brain lesions, including basal ganglia, and cerebral atrophy. Decreased activity of complex I and IV have been determined in muscle biopsy.","definition_xrefs":["Orphanet:254925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:766876004","GARD:17233","DOID:0111494","MESH:C565690","MEDGEN:387884","OMIM:610678","UMLS:C1857682"],"synonyms":[{"name":"COXPD4","type":"exact"},{"name":"TUFM combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 4","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 4","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in TUFM","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 4","type":"exact"}],"termid":"MONDO:0012534","terms_by_termid":{"MONDO:0012534":null},"xrefs":{"Monarch":{"xref_id":"0012534"}}}


id: GO:0045137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary sexual characteristics","termid":"GO:0045137"}


id: GO:0046396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid. D-galacturonic acid is a component of plant gums and bacterial cell walls.","definition_xrefs":["ISBN:0198506732","GOC:ai","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"galacturonate metabolic process","termid":"GO:0019586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-galacturonate metabolic process","synonyms":[{"name":"D-galacturonate metabolism","type":"exact"}],"termid":"GO:0046396"}


id: FYPO:0004169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the population in which the cell is found is in stationary phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level in stationary phase","synonyms":[{"name":"decreased RNA accumulation in stationary phase","type":"related"},{"name":"decreased transcript level in stationary phase","type":"exact"},{"name":"reduced RNA level in stationary phase","type":"exact"}],"termid":"FYPO:0004169"}


id: GO:0050439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + glyoxylate + H+ = 2-hydroxy-3-oxoadipate + CO2.","definition_xrefs":["EC:2.2.1.5","RHEA:14341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016744"],"is_obsolete":false,"name":"2-hydroxy-3-oxoadipate synthase activity","secondary_identifiers":["MetaCyc:2-HYDROXY-3-OXOADIPATE-SYNTHASE-RXN","KEGG_REACTION:R00474"],"synonyms":[{"name":"2-hydroxy-3-oxoadipate glyoxylate-lyase (carboxylating) activity","type":"related"},{"name":"2-hydroxy-3-oxoadipate synthetase activity","type":"related"},{"name":"2-oxoglutarate:glyoxylate succinaldehydetransferase (decarboxylating)","type":"related"},{"name":"alpha-ketoglutaric-glyoxylic carboligase activity","type":"related"},{"name":"oxoglutarate: glyoxylate carboligase activity","type":"related"},{"name":"oxoglutarate:glyoxylate carboligase activity","type":"related"}],"termid":"GO:0050439"}


id: PBO:0039483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A6, pseudogene","termid":"PBO:0039483"}


id: GO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine residues by deamidation and esterification with omega-hydroxyceramide.","definition_xrefs":["RESID:AA0347","PMID:10411887"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-glutamyl 5-omega-hydroxyceramide ester biosynthetic process from peptidyl-glutamine (obsolete GO:0050496)","synonyms":[{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester anabolism from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester formation from peptidyl-glutamine","type":"exact"},{"name":"peptidyl-L-glutamyl 5-omega-hydroxyceramide ester synthesis from peptidyl-glutamine","type":"exact"}],"termid":"GO:0050496"}


id: FYPO:0005637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of the first meiotic nuclear division begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal onset of metaphase/anaphase transition of meiosis I","synonyms":[{"name":"normal duration of meiosis I metaphase","type":"related"},{"name":"normal duration of metaphase during meiosis I","type":"related"},{"name":"normal onset of meiosis I metaphase/anaphase transition","type":"exact"},{"name":"normal onset of metaphase/anaphase transition of first meiotic nuclear division","type":"exact"},{"name":"normal timing of meiosis I metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0005637"}


id: PBO:0087761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1; TORC1 is a rapamycin-sensitive complex involved in growth control that contains Tor1p or Tor2p, Lst8p and Tco89p; contains four HEAT repeats and seven WD-40 repeats; may act as a scaffold protein to couple TOR and its effectors","termid":"PBO:0087761"}


id: PBO:0077362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 102","termid":"PBO:0077362"}


id: MONDO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency, developmental delay, and hypohomocysteinemia","secondary_identifiers":["OMIM:617744","UMLS:C4540293","MEDGEN:1616061"],"synonyms":[{"name":"IMDDHH","type":"related"},{"name":"immunodeficiency, developmental delay, and hypohomocysteinemia","type":"exact"}],"termid":"MONDO:0060591","xrefs":{"Monarch":{"xref_id":"0060591"}}}


id: PBO:0004616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4 (predicted)","termid":"PBO:0004616"}


id: PBO:0067343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 440, pseudogene","termid":"PBO:0067343"}


id: PBO:0086903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative tubulin tyrosine ligase associated with P-bodies; may have a role in mRNA metabolism; yeast knockout collection strain identified as a pby1 null mutant is actually wild-type for PBY1 and deleted for mms4","termid":"PBO:0086903"}


id: MONDO:0023659
data:
  {"annotated_genes":["SJAG_00330"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88279],"is_not":false,"summary":null,"term":"MONDO:0023659"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 96","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1780167","GARD:16445","OMIM:619340","DOID:0070377","UMLS:C5543446"],"synonyms":[{"name":"DEE96","type":"exact"}],"termid":"MONDO:0023659","terms_by_termid":{"MONDO:0023659":null},"xrefs":{"Monarch":{"xref_id":"0023659"}}}


id: MONDO:0014849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive nonsyndromic deafness 105 (obsolete MONDO:0014849)","secondary_identifiers":["OMIM:616958"],"termid":"MONDO:0014849","xrefs":{"Monarch":{"xref_id":"0014849"}}}


id: GO:0075190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont hyphopodium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of hyphopodium formation","termid":"GO:0075188"},{"relation_name":"negatively_regulates","term_name":"hyphopodium formation","termid":"GO:0075187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hyphopodium formation","synonyms":[{"name":"negative regulation of hyphopodium formation on or near host","type":"exact"}],"termid":"GO:0075190"}


id: PBO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sulfide_level","termid":"PBO:0030288"}


id: MONDO:0010355
data:
  {"annotated_genes":["SJAG_01465","SJAG_03635","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88820,88821,88822],"is_not":false,"summary":null,"term":"MONDO:0010355"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Claes-Jensen type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16744","MEDGEN:335139","OMIM:300534","UMLS:C1845243","MESH:C564494","DOID:0060809","Orphanet:85279","SCTID:719161008"],"synonyms":[{"name":"MRXSCJ","type":"exact"},{"name":"MRXSJ","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"mental retardation, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"syndromic X-linked intellectual disability Claes-Jensen type","type":"exact"},{"name":"syndromic X-linked intellectual disability JARID1C-related","type":"exact"},{"name":"syndromic X-linked intellectual disability due to JARID1C mutation","type":"exact"},{"name":"syndromic X-linked mental retardation JARID1C-related","type":"exact"}],"termid":"MONDO:0010355","terms_by_termid":{"MONDO:0010355":null},"xrefs":{"Monarch":{"xref_id":"0010355"}}}


id: GO:0070709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of a guanosine nucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine insertion","synonyms":[{"name":"RNA G insertion","type":"exact"}],"termid":"GO:0070709"}


id: PBO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 15","termid":"PBO:0050688"}


id: GO:2000602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of interphase of mitotic cell cycle.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of interphase of mitotic cell cycle (obsolete GO:2000602)","synonyms":[{"name":"regulation of interphase of mitotic cell cycle","type":"exact"}],"termid":"GO:2000602"}


id: PBO:0055745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA bladder and prostate cancer suppressor, hnRNPK interacting","termid":"PBO:0055745"}


id: PBO:0000385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9","termid":"PBO:0000385"}


id: GO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + X-SO3(-) = HX + 9-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol sulfotransferase activity (obsolete GO:0018726)","synonyms":[{"name":"9-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018726"}


id: FYECO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hydroxyurea was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ HU","synonyms":[{"name":"hydroxyurea added","type":"exact"}],"termid":"FYECO:0000170"}


id: MONDO:0014355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited odontologic disease (obsolete MONDO:0019183)","termid":"MONDO:0019183"},{"relation_name":"is_a","term_name":"arrhythmogenic cardiomyopathy with wooly hair and keratoderma","termid":"MONDO:0011581"},{"relation_name":"is_a","term_name":"erythrokeratoderma","termid":"MONDO:0019270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cardiomyopathy, dilated, with wooly hair, keratoderma, and tooth agenesis","secondary_identifiers":["Orphanet:476096","MEDGEN:862830","GARD:16014","OMIM:615821","UMLS:C4014393"],"synonyms":[{"name":"DCWHKTA","type":"related"},{"name":"EKC syndrome","type":"exact"},{"name":"cardiomyopathy, dilated, with wooly hair, keratoderma, and tooth agenesis","type":"exact"},{"name":"dilated cardiomyopathy with woolly hair, keratoderma, and tooth agenesis","type":"exact"},{"name":"dilated cardiomyopathy with wooly hair, keratoderma, and tooth agenesis","type":"exact"},{"name":"erythrokeratodermia-cardiomyopathy syndrome","type":"exact"}],"termid":"MONDO:0014355","xrefs":{"Monarch":{"xref_id":"0014355"}}}


id: GO:0043699
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which uric acid and/or purines crystalize in reflective stacks. Leucosomes are synthesized in leucophore cells and have a whitish cast.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"leucosome","synonyms":[{"name":"refractosome","type":"exact"}],"termid":"GO:0043699"}


id: MONDO:0008331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Apparent optic disk swelling in the absence of increased intracranial pressure.","gene_count":0,"genotype_count":0,"name":"obsolete pseudopapilledema (obsolete MONDO:0008331)","secondary_identifiers":["SCTID:57138009","MESH:C562401","OMIM:177800","Orphanet:519339","DOID:1392","ICD9:377.24"],"synonyms":[{"name":"crowded optic disk","type":"related"},{"name":"obsolete pseudopapilledema (disease)","type":"exact"},{"name":"pseudopapilledema","type":"exact"}],"termid":"MONDO:0008331","xrefs":{"Monarch":{"xref_id":"0008331"}}}


id: PBO:0080265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 28 pseudogene","termid":"PBO:0080265"}


id: GO:0008392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to a cis-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:18952572","PMID:10681399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate monooxygenase activity","termid":"GO:0008391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonate epoxygenase activity","secondary_identifiers":["Reactome:R-HSA-211983"],"synonyms":[{"name":"arachidonic acid epoxygenase activity","type":"exact"},{"name":"cytochrome P450 CYP2J5","type":"narrow"},{"name":"cytochrome P450 CYP2J6","type":"narrow"}],"termid":"GO:0008392"}


id: PBO:0085563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein distantly similar to ceramide synthases, Lag1p and Lac1p; mutation confers sensitivity to inhibitors of sphingolipid biosynthesis","termid":"PBO:0085563"}


id: GO:0002290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a gamma-delta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["PMID:8717523","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell activation involved in immune response","synonyms":[{"name":"gamma-delta T cell activation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"gamma-delta T-cell activation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002290"}


id: PBO:0073842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC8A1 antisense RNA 1","termid":"PBO:0073842"}


id: MONDO:0013718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nephronophthisis that has material basis in homozygous or compound heterozygous mutation in the WDR19 gene on chromosome 4p14.","definition_xrefs":["PMID:22019273","DOID:0111121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 13","secondary_identifiers":["MEDGEN:482242","OMIM:614377","UMLS:C3280612"],"synonyms":[{"name":"NPHP13","type":"exact"},{"name":"nephronophthisis 13","type":"exact"},{"name":"nephronophthisis type 13","type":"exact"}],"termid":"MONDO:0013718","xrefs":{"Monarch":{"xref_id":"0013718"}}}


id: PBO:0050698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA12A antisense RNA 1","termid":"PBO:0050698"}


id: MONDO:0011469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital amegakaryocytic thrombocytopenia (obsolete MONDO:0011469)","secondary_identifiers":["NANDO:2200651"],"termid":"MONDO:0011469","xrefs":{"Monarch":{"xref_id":"0011469"}}}


id: PBO:0043370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog","termid":"PBO:0043370"}


id: FYPO:0000251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on galactose carbon source","synonyms":[{"name":"decreased growth on galactose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on galactose carbon source","type":"exact"},{"name":"growth defects, growth inhibition in galactose-based medium","type":"related"},{"name":"reduced cell growth on galactose carbon source","type":"exact"},{"name":"slow cell growth on galactose carbon source","type":"narrow"}],"termid":"FYPO:0000251"}


id: FYPO:0004127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 4 of histone H3 at protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"decreased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 dimethylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me2 at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 dimethylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0004127"}


id: GO:0062028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of stress granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of stress granule assembly","termid":"GO:0062028"}


id: PBO:0117464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, glycine and IPP transporter Hem25","termid":"PBO:0117464"}


id: GO:0034066
data:
  {"annotated_genes":["SJAG_00143","SJAG_06588"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77477,78954],"is_not":false,"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that acts as a nucleotide exchange factor for the GTPase Ypt6p, and is required for fusion of endosome-derived vesicles with the Golgi.","definition_xrefs":["PMID:10990452","GOC:jh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Ric1-Rgp1 guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Ric1p-Rgp1p complex","type":"related"}],"termid":"GO:0034066","terms_by_termid":{"GO:0034066":null}}


id: GO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051940"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"activation of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"positive regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"},{"name":"stimulation of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of catecholamine uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051944"}


id: MONDO:0017491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial hemimelia","termid":"MONDO:0010144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia, bilateral","secondary_identifiers":["icd11.foundation:1562926182","MEDGEN:1776601","Orphanet:295079","UMLS:C5438440"],"synonyms":[{"name":"tibial longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017491","xrefs":{"Monarch":{"xref_id":"0017491"}}}


id: GO:0000479
data:
  {"annotated_genes":["SJAG_04188","SJAG_03234","SJAG_00955","SJAG_03846","SJAG_00772","SJAG_03952","SJAG_02553","SJAG_02644","SJAG_03796","SJAG_01623","SJAG_00344","SJAG_01476","SJAG_02547","SJAG_03425","SJAG_00897","SJAG_06613","SJAG_04174","SJAG_02275","SJAG_04524","SJAG_04582","SJAG_03789","SJAG_00965","SJAG_04224","SJAG_02861","SJAG_04916","SJAG_01581","SJAG_02250","SJAG_02374","SJAG_01551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76096,77547,78550],"is_not":false,"summary":null,"term":"GO:0000479"},{"annotations":[105910,93472,96740,73209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000448"},{"annotations":[74594,72029,79653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[106358,98280,104925,107461,117234,73591,107462,96485,117146,74598,79991,106575,60802,72035,72904,116041,120460,115327,76211,98570,110823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[76212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[72028,79652,74593,110824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02861":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04224":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000479","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000461":null,"GO:0000472":null,"GO:0000479":null,"GO:0000480":null}}


id: GO:2000831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of steroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of steroid hormone secretion","termid":"GO:2000831"}


id: FYPO:0007618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus begins later than normal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus during vegetative growth","termid":"FYPO:0000345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein export from nucleus","synonyms":[{"name":"delayed onset of protein export from nucleus during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein export from nucleus during vegetative growth","type":"exact"},{"name":"delayed protein export from nucleus","type":"exact"}],"termid":"FYPO:0007618"}


id: MONDO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the recurrent failure to resist the impulse to steal items of little intrinsic value; the individual experiences a rising subjective sense of tension before the theft and a sense of gratification or relief during the theft.","definition_xrefs":["NCIT:C94333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kleptomania","secondary_identifiers":["ICD10CM:F63.2","icd11.foundation:804604349","MEDGEN:5974","UMLS:C0022734","SCTID:69361009","DOID:12400","ICD9:312.32"],"synonyms":[{"name":"kleptomania","type":"exact"},{"name":"pathological stealing","type":"exact"}],"termid":"MONDO:0001520","xrefs":{"Monarch":{"xref_id":"0001520"}}}


id: FYPO:0006226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to spermidine. Cells stop growing (and may die) at a concentration of spermidine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to spermidine","synonyms":[{"name":"hypersensitive to spermidine","type":"exact"},{"name":"sensitive to spermidine during mitotic cell cycle","type":"related"},{"name":"sensitive to spermidine during vegetative growth","type":"exact"}],"termid":"FYPO:0006226"}


id: GO:0002841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a T cell mediated immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of immune response to tumor cell","termid":"GO:0002838"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"negatively_regulates","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell mediated immune response to tumor cell","synonyms":[{"name":"down regulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"down-regulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"downregulation of T cell mediated immune response to tumor cell","type":"exact"},{"name":"inhibition of T cell mediated immune response to tumor cell","type":"narrow"},{"name":"negative regulation of T cell mediated immune response to tumour cell","type":"exact"},{"name":"negative regulation of T lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"negative regulation of T-cell mediated immune response to tumor cell","type":"exact"},{"name":"negative regulation of T-lymphocyte mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002841"}


id: PBO:0114524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex WD repeat subunit Hif2","termid":"PBO:0114524"}


id: PBO:0070473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 8","termid":"PBO:0070473"}


id: PR:Q9USK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf20 gene.","definition_xrefs":["UniProtKB:Q9USK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.14","synonyms":[{"name":"Spom972h-cwf20","type":"exact"},{"name":"complexed with cdc5 protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK4"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: PBO:0039691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APCDD1L divergent transcript","termid":"PBO:0039691"}


id: PBO:0034453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0034453"}


id: GO:0007275
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59451],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009791"}]},"cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:tb","GOC:dph","GOC:isa_complete","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism development","references_by_uniquename":{"GO_REF:0000117":null},"termid":"GO:0007275","terms_by_termid":{"GO:0009791":null}}


id: PR:Q9P6N7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonine aspartase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10188:SF8","PRO:DNx","OMA:SCHPO01085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.09c","secondary_identifiers":["UniProtKB:Q9P6N7"],"synonyms":[{"name":"Spom972h-TASP1","type":"exact"},{"name":"taspase-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N7"}


id: GO:0097592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the ventral disc of Giardia species (trophozoite stage) where two portions of the same array of microtubules overlap (the microtubule array makes a complete circle and overlaps on itself).","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc overlap zone","synonyms":[{"name":"overlap zone","type":"broad"},{"name":"ventral disk overlap zone","type":"related"}],"termid":"GO:0097592"}


id: FYPO:0004858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Congo Red.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on Congo Red","synonyms":[{"name":"normal cell population growth in presence of Congo Red","type":"exact"},{"name":"normal cell population growth on Congo Red","type":"exact"},{"name":"normal cellular response to Congo Red","type":"related"},{"name":"normal vegetative cell population growth on Congo Red","type":"exact"}],"termid":"FYPO:0004858"}


id: MONDO:1011946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital joint laxity and dwarfism, non-human animal","secondary_identifiers":["OMIA:000570"],"termid":"MONDO:1011946","xrefs":{"Monarch":{"xref_id":"1011946"}}}


id: MONDO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphangioma that involves the capillary.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"},{"relation_name":"is_a","term_name":"benign blood vessel neoplasm","termid":"MONDO:0024286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"capillary lymphangioma","secondary_identifiers":["DOID:2286","NCIT:C27509","SCTID:445492005","UMLS:C0334543","MEDGEN:569678"],"synonyms":[{"name":"capillary lymphangioma","type":"exact"},{"name":"cutaneous lymphangioma","type":"related"}],"termid":"MONDO:0002262","xrefs":{"Monarch":{"xref_id":"0002262"}}}


id: GO:1904447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of folic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:hal","GOC:BHF","GOC:TermGenie","PMID:19762432","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"folate import across plasma membrane","synonyms":[{"name":"folate import into cell","type":"exact"},{"name":"folic acid import across plasma membrane","type":"related"}],"termid":"GO:1904447"}


id: MONDO:0014813
data:
  {"annotated_genes":["SJAG_00586"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87549],"is_not":false,"summary":null,"term":"MONDO:0014813"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the HIKESHI gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060795","UMLS:C4225170","OMIM:616881","MEDGEN:896545"],"synonyms":[{"name":"HIKESHI leukodystrophy","type":"exact"},{"name":"HLD13","type":"exact"},{"name":"hikeshi leukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 13","type":"exact"},{"name":"leukodystrophy caused by mutation in HIKESHI","type":"exact"},{"name":"leukodystrophy caused by mutation in hikeshi","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 13","type":"exact"},{"name":"leukodystrophy, hypomyelinating, type 13","type":"exact"}],"termid":"MONDO:0014813","terms_by_termid":{"MONDO:0014813":null},"xrefs":{"Monarch":{"xref_id":"0014813"}}}


id: PBO:0076163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase 1","termid":"PBO:0076163"}


id: PBO:0066216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 12","termid":"PBO:0066216"}


id: PBO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 18 pseudogene","termid":"PBO:0062087"}


id: MONDO:0035037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic disorder of the visual organs (obsolete MONDO:0035037)","secondary_identifiers":["Orphanet:522504"],"termid":"MONDO:0035037","xrefs":{"Monarch":{"xref_id":"0035037"}}}


id: MONDO:0035337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurologic disease characterized by the presence of Duane retraction syndrome (i. e. a congenital cranial dysinnervation disorder with unilateral or bilateral limitation of abduction and/or adduction of the eye, as well as globe retraction and palpebral fissure narrowing on attempted adduction) in combination with congenital unilateral or bilateral hearing loss. The sidedness of hearing loss corresponds to the sidedness of the retraction syndrome.","definition_xrefs":["Orphanet:529574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Duane retraction syndrome","termid":"MONDO:0007473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome with congenital deafness","secondary_identifiers":["MEDGEN:1804304","UMLS:C5680193","GARD:17968"],"synonyms":[{"name":"DRS with deafness","type":"exact"},{"name":"DRS with hearing loss","type":"exact"},{"name":"DURS with deafness","type":"exact"},{"name":"DURS with hearing loss","type":"exact"},{"name":"Duane retraction syndrome with congenital hearing loss","type":"exact"}],"termid":"MONDO:0035337","xrefs":{"Monarch":{"xref_id":"0035337"}}}


id: MONDO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that involves abnormality of collagen synthesis in lamellar bones, with manifestations limited to the skeleton. The initial symptom is frequently spontaneous fractures.","definition_xrefs":["PMID:7559718","DOID:0080040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrogenesis imperfecta ossium","synonyms":[{"name":"baker's disease","type":"exact"}],"termid":"MONDO:0000849","xrefs":{"Monarch":{"xref_id":"0000849"}}}


id: MOD:01755
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01755"}


id: PBO:0027482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_level_during_G0","termid":"PBO:0027482"}


id: MONDO:0003459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, polypoid neoplasm that arises from the cervix. It is characterized by the presence of epithelial and mesenchymal elements.","definition_xrefs":["NCIT:C40230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical benign neoplasm","termid":"MONDO:0000644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical adenofibroma","secondary_identifiers":["UMLS:C1516402","MEDGEN:308942","DOID:5476"],"termid":"MONDO:0003459","xrefs":{"Monarch":{"xref_id":"0003459"}}}


id: PR:Q9HGL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sum2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sum2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.09","synonyms":[{"name":"Spom972h-sum2","type":"exact"}],"termid":"PR:Q9HGL3"}


id: PBO:0050258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 36","termid":"PBO:0050258"}


id: GO:0042442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of melatonin (N-acetyl-5-methoxytryptamine).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin metabolic process","termid":"GO:0030186"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melatonin catabolic process","secondary_identifiers":["GO:0042449"],"synonyms":[{"name":"melatonin breakdown","type":"exact"},{"name":"melatonin catabolism","type":"exact"},{"name":"melatonin degradation","type":"exact"}],"termid":"GO:0042442"}


id: GO:0033709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NADP+ = D-ribulose + NADPH + H+. Can also produce D-ribulose.","definition_xrefs":["EC:1.1.1.287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-arabinitol dehydrogenase (NADP+) activity","synonyms":[{"name":"ARD1p","type":"related"},{"name":"D-arabinitol dehydrogenase 1 activity","type":"broad"},{"name":"D-arabinitol dehydrogenase, D-ribulose forming (NADP+) activity","type":"related"},{"name":"D-arabinitol dehydrogenase, D-xylulose forming (NADP+) activity","type":"related"},{"name":"D-arabinitol:NADP+ dehydrogenase activity","type":"broad"},{"name":"NADP+-dependent D-arabinitol dehydrogenase activity","type":"broad"}],"termid":"GO:0033709"}


id: PR:O94756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu14 gene.","definition_xrefs":["UniProtKB:O94756","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.03","synonyms":[{"name":"Spom972h-meu14","type":"exact"}],"termid":"PR:O94756"}


id: GO:2000714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000714)","synonyms":[{"name":"positive regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000714"}


id: FYPO:0008220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the G2/M phase of the mitotic cycle in which monomethylation of lysine at position 20 of histone H4 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0004223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4-K20 monomethylation in transcribed regions during mitotic G2/M phase","termid":"FYPO:0008220"}


id: PBO:0069017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 261, pseudogene","termid":"PBO:0069017"}


id: MONDO:0024495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"general tumor grading characteristic","termid":"MONDO:0024489"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor grade 1 or 2, general grading system","synonyms":[{"name":"grade 1/2","type":"exact"}],"termid":"MONDO:0024495","xrefs":{"Monarch":{"xref_id":"0024495"}}}


id: MONDO:1010312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis with gingival hamartomas that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis with gingival hamartomas, non-human animal","secondary_identifiers":["OMIA:001887"],"termid":"MONDO:1010312","xrefs":{"Monarch":{"xref_id":"1010312"}}}


id: GO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + NADP+ = 2-oxoglutarate + L-glutamine + H+ + NADPH. This is a two-step reaction: (a) L-glutamate + NH3 = L-glutamine + H2O, (b) L-glutamate + NADP+ + H2O = NH3 + 2-oxoglutarate + NADPH + H+.","definition_xrefs":["RHEA:15501","EC:1.4.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate synthase (NADPH) activity","secondary_identifiers":["MetaCyc:GLUTAMATESYN-RXN","KEGG_REACTION:R00114"],"synonyms":[{"name":"GOGAT activity","type":"broad"},{"name":"L-glutamate synthase activity","type":"broad"},{"name":"L-glutamate synthetase activity","type":"broad"},{"name":"L-glutamate:NADP+ oxidoreductase (transaminating)","type":"related"},{"name":"L-glutamine:2-oxoglutarate aminotransferase, NADPH oxidizing activity","type":"related"},{"name":"NADPH GOGAT","type":"exact"},{"name":"NADPH-dependent glutamate synthase activity","type":"related"},{"name":"NADPH-glutamate synthase activity","type":"related"},{"name":"NADPH-linked glutamate synthase","type":"related"},{"name":"glutamate (reduced nicotinamide adenine dinucleotide phosphate) synthase activity","type":"related"},{"name":"glutamate synthetase (NADP) activity","type":"related"},{"name":"glutamine amide-2-oxoglutarate aminotransferase (oxidoreductase, NADP) activity","type":"related"},{"name":"glutamine-ketoglutaric aminotransferase activity","type":"related"}],"termid":"GO:0004355"}


id: PBO:0084302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron-binding protein; involved in targeting cytoplasmic SRP-independent proteins to the ER; contains a CSL Zn finger and a DnaJ-domain; involved in diphthamide biosynthesis; ortholog human Dph4","termid":"PBO:0084302"}


id: GO:0007164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in a tissue, such that they all orient to similar coordinates.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of tissue polarity","termid":"GO:0007164"}


id: PR:O94269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.21","synonyms":[{"name":"Spom972h-ubp3","type":"exact"},{"name":"deubiquitinating enzyme 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94269"}


id: PBO:0065035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 1","termid":"PBO:0065035"}


id: GO:0008725
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103377],"is_not":false,"summary":null,"term":"GO:0008725"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methyladenine + H2O = DNA with abasic site + 3-methyladenine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methyladenine and the deoxyribose sugar to remove the 3-methyladenine, leaving an abasic site.","definition_xrefs":["PMID:10872450","EC:3.2.2.20","GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-3-methylbase glycosylase activity","termid":"GO:0043733"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-5189"],"synonyms":[{"name":"3-methyladenine DNA glycosylase I","type":"related"},{"name":"DNA glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosidase I activity","type":"related"},{"name":"DNA-3-methyladenine glycosylase I activity","type":"exact"},{"name":"deoxyribonucleate 3-methyladenine glycosidase I","type":"related"}],"termid":"GO:0008725","terms_by_termid":{"GO:0008725":null}}


id: GO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa bonds in small molecule substrates. Highly selective action to release kallidin (lysyl-bradykinin) from kininogen involves hydrolysis of Met-Xaa or Leu-Xaa. The rat enzyme is unusual in liberating bradykinin directly from autologous kininogens by cleavage at two Arg-Xaa bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue kallikrein activity (obsolete GO:0004293)","synonyms":[{"name":"bradykininogenase","type":"broad"},{"name":"callicrein","type":"related"},{"name":"depot-padutin","type":"related"},{"name":"dilminal D","type":"related"},{"name":"glandular kallikrein activity","type":"related"},{"name":"glumorin","type":"related"},{"name":"kallidinogenase","type":"broad"},{"name":"kidney kallikrein","type":"related"},{"name":"kininogenase","type":"broad"},{"name":"kininogenin activity","type":"related"},{"name":"onokrein P","type":"related"},{"name":"padreatin","type":"related"},{"name":"padutin","type":"related"},{"name":"pancreatic kallikrein","type":"related"},{"name":"salivary kallikrein","type":"related"},{"name":"submandibular kallikrein","type":"related"},{"name":"submaxillary kallikrein","type":"related"},{"name":"tissue kallikrein activity","type":"exact"},{"name":"urinary kallikrein","type":"related"},{"name":"urokallikrein","type":"related"}],"termid":"GO:0004293"}


id: MONDO:0800465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ectodermal dysplasia syndrome in which the cause of the disease is a variation in the CTSC gene. Variations in the CTSC gene can result in (1) Papillon-Lefevre syndrome (PLS) characterized by palmoplantar keratoderma, severe periodontitis affecting deciduous and permanent dentitions, and premature loss of dentition, (2) Haim-Munk syndrome (HMS) with additional features of arachnodactly, acroosteolysis, pesplanus, and onychogryphosis, (3) aggressive periodontitis 1 (AP1) characterized by severe and protracted gingival infections, leading to tooth loss. All three phenotypes are associated with autosomal recessive inheritance.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"CTSC-related disorder","synonyms":[{"name":"CTSC-related disorder","type":"exact"}],"termid":"MONDO:0800465","xrefs":{"Monarch":{"xref_id":"0800465"}}}


id: PBO:0077667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 13B","termid":"PBO:0077667"}


id: PBO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 2","termid":"PBO:0070330"}


id: SO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone insert that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"clone_insert","termid":"SO:0000753"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_insert","synonyms":[{"name":"engineered insert","type":"exact"}],"termid":"SO:0000915"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0003674","GO:0003824","GO:0016740","GO:0038023","GO:0140096"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: PBO:0043532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cochlin","termid":"PBO:0043532"}


id: GO:0043552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043552)","synonyms":[{"name":"activation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"positive regulation of phosphoinositide 3-kinase activity","type":"exact"},{"name":"stimulation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"up regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"up-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"upregulation of phosphatidylinositol 3-kinase activity","type":"exact"}],"termid":"GO:0043552"}


id: MONDO:0019914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 9 is an uniparental disomy of maternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:96183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 9 disorder","termid":"MONDO:0700016"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 9","secondary_identifiers":["SCTID:766240006","GARD:19335","icd11.foundation:102102686","MEDGEN:1634619","UMLS:C4707721"],"synonyms":[{"name":"UPD(9)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 9","type":"exact"}],"termid":"MONDO:0019914","xrefs":{"Monarch":{"xref_id":"0019914"}}}


id: PBO:0071599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 16","termid":"PBO:0071599"}


id: GO:1903859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendrite extension.","definition_xrefs":["GOC:PARL","GOC:pad","GOC:TermGenie","PMID:24898855","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"dendrite extension","termid":"GO:0097484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendrite extension","termid":"GO:1903859"}


id: SO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The binding site (recognition site) of a homing endonuclease. The binding site is typically large.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_binding_site","termid":"SO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homing_endonuclease_binding_site","synonyms":[{"name":"homing endonuclease binding site","type":"exact"}],"termid":"SO:0001257"}


id: GO:0005897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-9; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-9 receptor, whereas the beta chain is shared with the receptors for several other interleukins.","definition_xrefs":["GOC:mah","PMID:10642536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"interleukin-9 receptor complex","synonyms":[{"name":"IL-9 receptor complex","type":"exact"}],"termid":"GO:0005897"}


id: FYPO:0008158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is increased at the silent mating-type locus.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-S10 phosphorylation during vegetative growth","termid":"FYPO:0004080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-S10 phosphorylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008158"}


id: GO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell.","definition_xrefs":["GOC:cilia","GOC:dgh","PMID:17009929","PMID:20144998","GOC:kmv","PMID:22118931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"motile cilium","secondary_identifiers":["GO:0031512","GO:0009434"],"synonyms":[{"name":"microtubule-based flagellum","type":"related"},{"name":"motile cilia","type":"exact"},{"name":"motile primary cilia","type":"related"},{"name":"motile primary cilium","type":"related"},{"name":"motile secondary cilium","type":"related"},{"name":"nodal cilium","type":"related"}],"termid":"GO:0031514"}


id: PBO:0090277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exonuclease, C-terminal domain superfamily","termid":"PBO:0090277"}


id: MONDO:0014168
data:
  {"annotated_genes":["SJAG_00677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87635],"is_not":false,"summary":null,"term":"MONDO:0014168"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to CORO1A deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:228003","UMLS:C3809383","GARD:17144","icd11.foundation:575769539","MEDGEN:815713","DOID:0060019","OMIM:615401"],"synonyms":[{"name":"IMD8","type":"related"},{"name":"SCID due to CORO1A deficiency","type":"exact"},{"name":"SCID due to coronin-1A deficiency","type":"exact"},{"name":"coronin-1A deficiency","type":"exact"},{"name":"immunodeficiency 8","type":"related"},{"name":"immunodeficiency type 8","type":"exact"},{"name":"severe combined immunodeficiency due to CORO1A deficiency","type":"exact"},{"name":"severe combined immunodeficiency due to coronin-1A deficiency","type":"exact"}],"termid":"MONDO:0014168","terms_by_termid":{"MONDO:0014168":null},"xrefs":{"Monarch":{"xref_id":"0014168"}}}


id: PBO:0085345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; displays transacylase activity in vitro; overproduction confers resistance to lysophosphatidylcholine","termid":"PBO:0085345"}


id: PBO:0052803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 43, pseudogene","termid":"PBO:0052803"}


id: SO:0001090
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Binding involving a covalent bond.","definition_xrefs":["EBIBS:GAR"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001090 covalent_binding_site (obsolete SO:0001090)","synonyms":[{"name":"covalent binding site","type":"exact"}],"termid":"SO:0001090"}


id: GO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate + H+.","definition_xrefs":["EC:3.7.1.2","RHEA:10244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"fumarylacetoacetase activity","secondary_identifiers":["MetaCyc:FUMARYLACETOACETASE-RXN","UM-BBD_reactionID:r0107","Reactome:R-HSA-71181","KEGG_REACTION:R01364"],"synonyms":[{"name":"4-fumarylacetoacetate fumarylhydrolase activity","type":"related"},{"name":"beta-diketonase activity","type":"related"},{"name":"fumarylacetoacetate hydrolase activity","type":"related"}],"termid":"GO:0004334"}


id: GO:0001098
data:
  {"annotated_genes":["SJAG_00095","SJAG_01610","SJAG_00159","SJAG_03118","SJAG_01151","SJAG_00448","SJAG_02037","SJAG_04933","SJAG_04353","SJAG_00139","SJAG_00483"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[74208,79890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[80344,72773,77947,80333,57565,73980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[80899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[77846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of the RNA polymerase core enzyme and the basal transcription factor(s), the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00139":null,"SJAG_00159":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_02037":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"basal transcription machinery binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0001098","terms_by_termid":{"GO:0000993":null,"GO:0001096":null,"GO:0001097":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0056724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylphosphate capping enzyme","termid":"PBO:0056724"}


id: GO:0020007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A group of cytoskeletal structures and associated membrane-bounded organelles found at the anterior end of adult obligate intracellular protozoan parasites in the phylum Apicomplexa. The apical complex is involved in attachment to and penetration of the host cell, and in parasite proliferation.","definition_xrefs":["GOC:giardia","GOC:mb","PMID:16518471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical complex","termid":"GO:0020007"}


id: GO:0006153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete purine nucleosidase reaction (obsolete GO:0006153)","synonyms":[{"name":"purine nucleosidase reaction","type":"exact"}],"termid":"GO:0006153"}


id: PBO:0085585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Arf3p regulation and in transcription regulation; localizes to the nucleus and to endocytic patches; contains an N-terminal Zn-finger and ArfGAP homology domain, a C-terminal glutamine-rich region, and a UBA (ubiquitin associated) domain; gts1 mutations affect budding, cell size, heat tolerance, sporulation, life span, ultradian rhythms, endocytosis; expression oscillates in a pattern similar to metabolic oscillations","termid":"PBO:0085585"}


id: PBO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 2","termid":"PBO:0044074"}


id: MONDO:1010682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in zebra finch.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, zebra finch","secondary_identifiers":["OMIA:000038-59729"],"termid":"MONDO:1010682","xrefs":{"Monarch":{"xref_id":"1010682"}}}


id: CHEBI:30911
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucitol","termid":"CHEBI:30911"}


id: MONDO:1012164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"micromelia, non-human animal","termid":"MONDO:1011765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micromelia, chicken","secondary_identifiers":["OMIA:000648-9031"],"termid":"MONDO:1012164","xrefs":{"Monarch":{"xref_id":"1012164"}}}


id: PBO:0080441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRK serine/threonine kinase 2","termid":"PBO:0080441"}


id: PBO:0086222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap190p; SAP185 has a paralog, SAP190, that arose from the whole genome duplication","termid":"PBO:0086222"}


id: GO:0035633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining the structure and function of the blood-brain barrier, thus ensuring specific regulated transport of substances (e.g. macromolecules, small molecules, ions) into the brain, and out of the brain into the blood circulation.","definition_xrefs":["GOC:bf","GOC:sl","PMID:20080302","GOC:bc","PMID:30280653","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of blood-brain barrier","synonyms":[{"name":"maintenance of BBB","type":"exact"},{"name":"maintenance of blood/brain barrier","type":"exact"}],"termid":"GO:0035633"}


id: PBO:0085364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylanthranilate isomerase; catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA); enhances vegetative growth at low and high temperatures when used as an auxotrophic marker in strains such as W303","termid":"PBO:0085364"}


id: MONDO:1012893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in dogs due to a mutation in the KRT1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, KRT1-related, dog","secondary_identifiers":["OMIA:002425-9615"],"synonyms":[{"name":"non-epidermolytic ichthyosis, dog","type":"related"}],"termid":"MONDO:1012893","xrefs":{"Monarch":{"xref_id":"1012893"}}}


id: PBO:0064754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 90","termid":"PBO:0064754"}


id: PR:000028989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sterol regulatory element-binding protein that is a translation product of the Schizosaccharomyces pombe 972h- sre1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sre1-type sterol regulatory element-binding protein 1","synonyms":[{"name":"SRE-1","type":"related"},{"name":"SRE1","type":"related"},{"name":"SREBP1","type":"related"},{"name":"sre1","type":"exact"}],"termid":"PR:000028989"}


id: GO:0002029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that stops, prevents, or reduces the frequency, rate or extent of G protein-coupled receptor signaling pathway after prolonged stimulation with an agonist of the pathway.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative adaptation of signaling pathway","termid":"GO:0022401"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"desensitization of G protein-coupled receptor signaling pathway","synonyms":[{"name":"desensitisation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"desensitization of G-protein coupled receptor protein signaling pathway","type":"exact"}],"termid":"GO:0002029"}


id: GO:1905715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cornification.","definition_xrefs":["PMID:26014679","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cornification","termid":"GO:1905715"}


id: PBO:0024477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein (Meikin) Moa1","termid":"PBO:0024477"}


id: PBO:0108948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 5","termid":"PBO:0108948"}


id: MONDO:0012077
data:
  {"annotated_genes":["SJAG_03170","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88385,88386],"is_not":false,"summary":null,"term":"MONDO:0012077"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the VAPB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10499","UMLS:C1837728","MEDGEN:325237","MESH:C563895","DOID:0050752","OMIM:608627"],"synonyms":[{"name":"ALS8","type":"exact"},{"name":"VAPB amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 8","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in VAPB","type":"exact"},{"name":"amyotrophic lateral sclerosis type 8","type":"exact"}],"termid":"MONDO:0012077","terms_by_termid":{"MONDO:0012077":null},"xrefs":{"Monarch":{"xref_id":"0012077"}}}


id: SO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA adenine base,at the 8 carbon, often the product of DNA damage.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenine","termid":"SO:0001962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8_oxoadenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"8-oxoA","type":"exact"},{"name":"8-oxoadenine","type":"exact"}],"termid":"SO:0001967"}


id: PBO:0060587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 26","termid":"PBO:0060587"}


id: GO:0051908
data:
  {"annotated_genes":["SJAG_01648","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98907,109570],"is_not":false,"summary":null,"term":"GO:0051908"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008309"},{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_01832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0004527","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"double-stranded DNA 5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.3"],"synonyms":[{"name":"double-stranded DNA 5'-3' exodeoxyribonuclease activity","type":"exact"},{"name":"double-stranded DNA specific 5'-3' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0051908","terms_by_termid":{"GO:0051908":null}}


id: MONDO:0018942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophagic myofasciitis","secondary_identifiers":["GARD:176","UMLS:C2931639","MEDGEN:419858","Orphanet:592","MESH:C537829","SCTID:718175009"],"synonyms":[{"name":"MMF","type":"exact"},{"name":"Macrophagic myofasciitis, childhood","type":"related"}],"termid":"MONDO:0018942","xrefs":{"Monarch":{"xref_id":"0018942"}}}


id: PBO:0076658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 20","termid":"PBO:0076658"}


id: PBO:0045971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 4","termid":"PBO:0045971"}


id: PBO:0065178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein only RNase P catalytic subunit","termid":"PBO:0065178"}


id: PBO:0076284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor pseudogene 1","termid":"PBO:0076284"}


id: PBO:0075851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2B","termid":"PBO:0075851"}


id: PBO:0088232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery protein Cia2","termid":"PBO:0088232"}


id: PBO:0041216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 4","termid":"PBO:0041216"}


id: SO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_RNA_chromosome","termid":"SO:0000962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_RNA_chromosome","synonyms":[{"name":"linear single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000963"}


id: MONDO:0013630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the B9D1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 9","secondary_identifiers":["GARD:15773","MEDGEN:481785","UMLS:C3280155","OMIM:614209"],"synonyms":[{"name":"B9D1 Meckel syndrome","type":"exact"},{"name":"MKS9","type":"related"},{"name":"Meckel syndrome caused by mutation in B9D1","type":"exact"},{"name":"Meckel syndrome, type 9","type":"exact"},{"name":"meckel syndrome 9","type":"exact"}],"termid":"MONDO:0013630","xrefs":{"Monarch":{"xref_id":"0013630"}}}


id: MONDO:0017232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recessive intellectual disability-motor dysfunction-multiple joint contractures syndrome is a rare, genetic, syndromic intellectual disability disorder characterized by severe intellectual disability, progressive, postnatal, multiple joint contractures and severe motor dysfunction. Patients present arrest and regression of motor function and speech acquisition, as well as contractures which begin in lower limbs and slowly progress in an ascending manner to include spine and neck, resulting in individuals presenting a specific fixed position.","definition_xrefs":["Orphanet:280384"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recessive intellectual disability-motor dysfunction-multiple joint contractures syndrome","secondary_identifiers":["GARD:21083","MEDGEN:1659846","UMLS:C4749580"],"synonyms":[{"name":"IDMDC","type":"exact"}],"termid":"MONDO:0017232","xrefs":{"Monarch":{"xref_id":"0017232"}}}


id: PBO:0005305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein","termid":"PBO:0005305"}


id: MONDO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign diffuse vascular proliferation in the breast. It is characterized by the formation of capillary-sized and cavernous vascular spaces.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast angiomatosis","secondary_identifiers":["MEDGEN:307304","UMLS:C1511284","NCIT:C40381","DOID:1637"],"termid":"MONDO:0002064","xrefs":{"Monarch":{"xref_id":"0002064"}}}


id: FYPO:0001528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal GTP binding","termid":"FYPO:0001528"}


id: PBO:0075473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 24","termid":"PBO:0075473"}


id: GO:0031552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of brain-derived neurotrophic factor-activated receptor activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of brain-derived neurotrophic factor-activated receptor activity (obsolete GO:0031552)","synonyms":[{"name":"down regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"down-regulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"downregulation of brain-derived neurotrophic factor receptor activity","type":"exact"},{"name":"inhibition of brain-derived neurotrophic factor receptor activity","type":"narrow"},{"name":"negative regulation of BDNF receptor activity","type":"exact"},{"name":"negative regulation of brain-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0031552"}


id: MONDO:0019901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-distal monosomy 20q","secondary_identifiers":["Orphanet:96164"],"synonyms":[{"name":"non-distal deletion 20q","type":"exact"},{"name":"non-distal monosomy type 20q","type":"exact"},{"name":"non-telomeric monosomy 20q","type":"exact"}],"termid":"MONDO:0019901","xrefs":{"Monarch":{"xref_id":"0019901"}}}


id: MOD:00114
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine methyl ester.","definition_xrefs":["RESID:AA0105","Unimod:34#C-term","PubMed:11875433","PubMed:1872463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-cysteine","termid":"MOD:01682"},{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905","MOD:00427"],"is_obsolete":false,"name":"L-cysteine methyl ester","synonyms":[{"name":"2-amino-3-mercaptopropanoic methyl ester","type":"exact"},{"name":"2-amino-3-sulfanylpropanoic methyl ester","type":"exact"},{"name":"L-cysteine methyl ester","type":"exact"},{"name":"MOD_RES Cysteine methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"OMeCys","type":"exact"},{"name":"mecysteine","type":"exact"},{"name":"methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"methyl L-cysteinate","type":"exact"},{"name":"methyl esterified L-cysteine","type":"exact"}],"termid":"MOD:00114"}


id: PBO:0038283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_comment","termid":"PBO:0038283"}


id: GO:0014705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the A band in which myosin-binding protein C is located and that can be seen by electron microscopy. This is a functional zone that also includes myosin.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A band","termid":"GO:0031672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"C zone","termid":"GO:0014705"}


id: FYPO:0008251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is lower than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PomBase:pc","PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased cenH-derived RNA level","termid":"FYPO:0008251"}


id: GO:0070544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 36 of the histone.","definition_xrefs":["PMID:19061644","GOC:sart"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 demethylation (obsolete GO:0070544)","synonyms":[{"name":"H3K36 demethylation","type":"related"}],"termid":"GO:0070544"}


id: GO:0010574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of vascular endothelial growth factor.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor production","termid":"GO:0010573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor production","termid":"GO:0010574"}


id: FYPO:0005854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin cables is increased.","definition_xrefs":["PMID:12764130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased actin cable assembly","synonyms":[{"name":"actin bundling increased","type":"related"},{"name":"increased actin bundling","type":"related"},{"name":"increased actin cable assembly during mitotic cell cycle","type":"related"},{"name":"increased actin cable assembly during vegetative growth","type":"exact"},{"name":"increased formin-nucleated actin cable assembly","type":"exact"}],"termid":"FYPO:0005854"}


id: PBO:0034218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bounding_layer_of","termid":"PBO:0034218"}


id: MONDO:0011670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome due to tenascin-X deficiency","secondary_identifiers":["OMIM:606408","DOID:0080731","UMLS:C1848029","icd11.foundation:1840696236","MESH:C536193","MEDGEN:336244","GARD:8507","Orphanet:230839"],"synonyms":[{"name":"EDS due to TNX deficiency","type":"related"},{"name":"EDS due to Tnx deficiency","type":"related"},{"name":"EDS, classic-like type","type":"exact"},{"name":"EDSCLL","type":"related"},{"name":"Ehlers-Danlos syndrome due to tenascin-X deficiency","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic-like","type":"related"},{"name":"Ehlers-Danlos syndrome, classic-like type","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic-like, 1","type":"exact"},{"name":"Ehlers-Danlos-like syndrome due to tenascin-X deficiency","type":"related"},{"name":"TNX deficiency","type":"related"},{"name":"Tnx deficiency","type":"related"},{"name":"clEDS","type":"related"},{"name":"classical-like EDS","type":"related"},{"name":"classical-like Ehlers-Danlos syndrome","type":"related"}],"termid":"MONDO:0011670","xrefs":{"Monarch":{"xref_id":"0011670"}}}


id: PATO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's motion characteristic.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flow rate","termid":"PATO:0001574"}


id: GO:0051210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size uniformly in all directions. In general, a rounded cell morphology reflects isotropic cell growth.","definition_xrefs":["GOC:jid","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isotropic cell growth","synonyms":[{"name":"uniform cell growth","type":"related"}],"termid":"GO:0051210"}


id: GO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thread-like connection joining two regions of ectopically paired polytene chromosomes.","definition_xrefs":["GOC:bf","ISBN:0120649012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome ectopic fiber","synonyms":[{"name":"polytene chromosome ectopic fibre","type":"exact"}],"termid":"GO:0005706"}


id: SO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000765 cosmid_clone (obsolete SO:0000765)","termid":"SO:0000765"}


id: MONDO:0003633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term describing a malignant soft tissue tumor which consists of two or more mesenchymal lines of differentiation, excluding a fibroblastic line of differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mesenchymoma","termid":"MONDO:0006854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mesenchymoma","secondary_identifiers":["UMLS:C0334492","MEDGEN:87252","DOID:5758","ICDO:8990/3","NCIT:C4268"],"synonyms":[{"name":"mesenchymoma, malignant","type":"exact"},{"name":"mesenchymoma, malignant (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003633","xrefs":{"Monarch":{"xref_id":"0003633"}}}


id: FYPO:0009045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of calcofluor and potassium chloride than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to calcofluor and potassium chloride","synonyms":[{"name":"resistance to calcofluor and potassium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to calcofluor and potassium chloride during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and potassium chloride in combination","type":"exact"},{"name":"resistant to calcofluor and potassium chloride","type":"exact"}],"termid":"FYPO:0009045"}


id: PBO:0072075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 5","termid":"PBO:0072075"}


id: GO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a short-chain fatty acid. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"short-chain fatty acid biosynthetic process","synonyms":[{"name":"short chain fatty acid biosynthesis","type":"exact"},{"name":"short chain fatty acid biosynthetic process","type":"exact"},{"name":"short-chain fatty acid anabolism","type":"exact"},{"name":"short-chain fatty acid biosynthesis","type":"exact"},{"name":"short-chain fatty acid formation","type":"exact"},{"name":"short-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0051790"}


id: PBO:0074156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E4","termid":"PBO:0074156"}


id: MONDO:0010750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulnar hypoplasia-split foot syndrome is characterized by the association of severe ulnar hypoplasia, absence of fingers two to five, and split-foot. It has been described in four males belonging to two generations of the same family. X-linked recessive inheritance is suggested, but autosomal dominant transmission cannot be excluded.","definition_xrefs":["Orphanet:1122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ulnar hypoplasia-split foot syndrome","secondary_identifiers":["GARD:5400","MEDGEN:333256","MESH:C536936","OMIM:314360","UMLS:C1839123"],"synonyms":[{"name":"Van De Berghe Dequeker syndrome","type":"related"},{"name":"Van den Berghe-Dequecker syndrome","type":"exact"},{"name":"complete absence of the ulna and of fingers 2 to 5, together with lobster-claw deformity of the feet","type":"related"},{"name":"familial ulnar aplasia and lobster claw syndrome","type":"related"},{"name":"severe ulnar aplasia and lobster claw feet","type":"related"},{"name":"ulnar hypoplasia lobster claw deformity of feet","type":"related"},{"name":"ulnar hypoplasia with lobster-claw deformity of feet","type":"related"},{"name":"ulnar hypoplasia-lobster-claw deformity of feet syndrome","type":"exact"}],"termid":"MONDO:0010750","xrefs":{"Monarch":{"xref_id":"0010750"}}}


id: PBO:0027364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_DNA_damage_during_mitotic_S_phase","termid":"PBO:0027364"}


id: GO:1905475
data:
  {"annotated_genes":["SJAG_02392","SJAG_03970","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[96184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[97636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to membrane.","definition_xrefs":["GOC:PARL","GOC:bc","PMID:26911690","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation in membrane","type":"exact"},{"name":"regulation of protein localization in membrane","type":"exact"}],"termid":"GO:1905475","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: GO:0009359
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions as an endonuclease to cleave DNA at or near a specific recognition site, when that site is unmethylated. These complexes may be dimers or tetramers; it is also possible for the endonuclease to be in a complex with the corresponding methyltransferase that methylates the recognition site. DNA restriction systems such as this are used by bacteria to defend against phage and other foreign DNA that may enter a cell.","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"type II site-specific deoxyribonuclease complex","synonyms":[{"name":"type II restriction enzyme complex","type":"exact"}],"termid":"GO:0009359"}


id: GO:1902399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in G1 DNA damage checkpoint.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in G1 DNA damage checkpoint (obsolete GO:1902399)","synonyms":[{"name":"detection of stimulus involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"perception of stimulus involved in G1 DNA damage checkpoint","type":"related"},{"name":"perception of stimulus involved in G1/S DNA damage checkpoint","type":"related"},{"name":"stimulus detection involved in G1 DNA damage checkpoint","type":"exact"},{"name":"stimulus detection involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"stimulus sensing involved in G1 DNA damage checkpoint","type":"related"},{"name":"stimulus sensing involved in G1/S DNA damage checkpoint","type":"related"}],"termid":"GO:1902399"}


id: GO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates thiamine biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100016)","termid":"GO:0100016"}


id: GO:0045214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"sarcomere organization","secondary_identifiers":["GO:0006938"],"synonyms":[{"name":"sarcomere alignment","type":"exact"},{"name":"sarcomere organisation","type":"exact"}],"termid":"GO:0045214"}


id: PBO:0045698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 3 pseudogene 2","termid":"PBO:0045698"}


id: PBO:0089135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease family, related to holliday junction resolvases, implicated in DNA or tRNA metabolism","termid":"PBO:0089135"}


id: GO:0015219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of protein-DNA complexes from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA complex transmembrane transporter activity (obsolete GO:0015219)","synonyms":[{"name":"DNA-protein complex transmembrane transporter activity","type":"exact"}],"termid":"GO:0015219"}


id: MONDO:0017957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified autoinflammatory syndrome (obsolete MONDO:0017957)","secondary_identifiers":["Orphanet:324936"],"termid":"MONDO:0017957","xrefs":{"Monarch":{"xref_id":"0017957"}}}


id: MONDO:0002281
data:
  {"annotated_genes":["SJAG_03447","SJAG_01548","SJAG_00694","SJAG_03164","SJAG_03424"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87455,87456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[86974,86975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009797"}]},"cv_name":"mondo","definition":"Anemia that is characterized by increased red blood cell volume.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_01548":null,"SJAG_03164":null,"SJAG_03424":null,"SJAG_03447":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"macrocytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2361","HP:0001972","MESH:D000748","NCIT:C34381","UMLS:C0002886","MEDGEN:1920","SCTID:83414005"],"synonyms":[{"name":"D22S676","type":"exact"},{"name":"D22S750","type":"exact"},{"name":"anaemia macrocytic","type":"exact"},{"name":"anemia macrocytic","type":"exact"},{"name":"macrocytic Anaemia","type":"exact"},{"name":"macrocytic Anemia","type":"exact"},{"name":"macrocytic anaemia (disease)","type":"exact"},{"name":"macrocytic anaemia of unspecified cause","type":"exact"},{"name":"macrocytic anemia","type":"exact"},{"name":"macrocytic anemia (disease)","type":"exact"},{"name":"macrocytic anemia of unspecified cause","type":"exact"}],"termid":"MONDO:0002281","terms_by_termid":{"MONDO:0007925":null,"MONDO:0009238":null,"MONDO:0009797":null},"xrefs":{"Monarch":{"xref_id":"0002281"}}}


id: MONDO:0013373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PSEN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1V","secondary_identifiers":["UMLS:C3150958","MEDGEN:462308","MESH:C566856","OMIM:613697","DOID:0110427","GARD:15690"],"synonyms":[{"name":"CMD1V","type":"exact"},{"name":"PSEN2 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1V","type":"related"},{"name":"cardiomyopathy, dilated, type 1V","type":"exact"},{"name":"dilated cardiomyopathy type 1V","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PSEN2","type":"exact"}],"termid":"MONDO:0013373","xrefs":{"Monarch":{"xref_id":"0013373"}}}


id: SO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons TAT and TAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine","synonyms":[{"name":"Tyr","type":"exact"},{"name":"Y","type":"exact"}],"termid":"SO:0001446"}


id: MONDO:0008086
data:
  {"annotated_genes":["SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88699],"is_not":false,"summary":null,"term":"MONDO:0008086"}]},"cv_name":"mondo","definition":"An axonal form of hereditary motor and sensory neuropathy distinguished by prominent early sensory loss and later positive sensory phenomena, caused by mutations in SPTLC1.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 1","termid":"MONDO:0018213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, type 1A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:162400","DOID:0070152","UMLS:C5235211","GARD:15095","MEDGEN:1716450"],"synonyms":[{"name":"HSAN 1A","type":"related"},{"name":"HSAN1A","type":"exact"},{"name":"HSN 1A","type":"related"},{"name":"SPTLC1 hereditary sensory and autonomic neuropathy type 1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1 caused by mutation in SPTLC1","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1A","type":"related"},{"name":"hereditary sensory and autonomic neuropathy type IA","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type IA","type":"related"},{"name":"neuropathy, hereditary sensory radicular, autosomal dominant, type 1A","type":"related"},{"name":"neuropathy, hereditary sensory, type 1A","type":"related"}],"termid":"MONDO:0008086","terms_by_termid":{"MONDO:0008086":null},"xrefs":{"Monarch":{"xref_id":"0008086"}}}


id: RO:0002615
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of is-model-of","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_model","termid":"RO:0002615"}


id: RO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A part of relation that applies only between occurents.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"RO:0002418"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurent_part_of","termid":"RO:0002012"}


id: GO:0072082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the kidney nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of proximal tubule identity","termid":"GO:0072082"}


id: GO:0008972
data:
  {"annotated_genes":["SJAG_04282","SJAG_02420","SJAG_02421"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71743,75614,75672],"is_not":false,"summary":null,"term":"GO:0008972"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-amino-2-methyl-5-phosphomethylpyrimidine = ADP + 4-amino-2-methyl-5-diphosphomethylpyrimidine.","definition_xrefs":["EC:2.7.4.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02420":null,"SJAG_02421":null,"SJAG_04282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"phosphomethylpyrimidine kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PYRIMSYN3-RXN","RHEA:19893"],"synonyms":[{"name":"ATP:4-amino-2-methyl-5-phosphomethylpyrimidine phosphotransferase activity","type":"related"},{"name":"hydroxymethylpyrimidine phosphokinase activity","type":"related"}],"termid":"GO:0008972","terms_by_termid":{"GO:0008972":null}}


id: MONDO:0024267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epidemic encephalitis (obsolete MONDO:0024267)","termid":"MONDO:0024267","xrefs":{"Monarch":{"xref_id":"0024267"}}}


id: PBO:0081271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 35","termid":"PBO:0081271"}


id: MONDO:0006883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm originating from the apical lung. Most malignant superior sulcus neoplasms are bronchogenic carcinomas. This tumor may be associated with Pancoast syndrome. It is also known as Pancoast tumor.","definition_xrefs":["NCIT:C7527"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung carcinoma","termid":"MONDO:0005138"},{"relation_name":"is_a","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"pulmonary sulcus neoplasm","termid":"MONDO:0024813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant superior sulcus neoplasm","secondary_identifiers":["MESH:D010178","EFO:1001080","MEDGEN:107810","SCTID:254638002","DOID:8007","SCTID:278065000","UMLS:C0549471","NCIT:C55815"],"synonyms":[{"name":"Pancoast tumor","type":"exact"},{"name":"Pancoast tumour","type":"exact"},{"name":"Pancoast's syndrome","type":"related"},{"name":"Pancoast's tumor","type":"exact"},{"name":"Pancoast's tumour","type":"exact"},{"name":"malignant Superior sulcus lung neoplasm","type":"exact"},{"name":"malignant Superior sulcus lung tumor","type":"exact"},{"name":"malignant Superior sulcus lung tumour","type":"exact"},{"name":"malignant Superior sulcus neoplasm","type":"exact"},{"name":"malignant Superior sulcus neoplasm of lung","type":"exact"},{"name":"malignant Superior sulcus neoplasm of the lung","type":"exact"},{"name":"malignant Superior sulcus tumor","type":"exact"},{"name":"malignant Superior sulcus tumor of lung","type":"exact"},{"name":"malignant Superior sulcus tumor of the lung","type":"exact"},{"name":"malignant Superior sulcus tumour","type":"exact"},{"name":"malignant Superior sulcus tumour of lung","type":"exact"},{"name":"malignant Superior sulcus tumour of the lung","type":"exact"},{"name":"malignant pulmonary sulcus neoplasm","type":"exact"},{"name":"pulmonary sulcus neoplasm, malignant","type":"exact"},{"name":"pulmonary sulcus tumour","type":"related"},{"name":"superior pulmonary sulcus syndrome","type":"exact"},{"name":"superior pulmonary sulcus syndrome (disorder) [ambiguous]","type":"related"},{"name":"superior sulcus tumor","type":"related"},{"name":"superior sulcus tumour","type":"related"}],"termid":"MONDO:0006883","xrefs":{"Monarch":{"xref_id":"0006883"}}}


id: PBO:0079413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 7","termid":"PBO:0079413"}


id: FYPO:0000737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic spindle assembly","synonyms":[{"name":"abnormal spindle assembly involved in meiosis","type":"exact"}],"termid":"FYPO:0000737"}


id: GO:0090141
data:
  {"annotated_genes":["SJAG_01212"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110700],"is_not":false,"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of mitochondrial fission","termid":"GO:0090140"},{"relation_name":"positively_regulates","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of mitochondrial fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrial division","type":"exact"}],"termid":"GO:0090141","terms_by_termid":{"GO:0090141":null}}


id: MONDO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis of the coronary vasculature.","definition_xrefs":["NCIT:C35505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary atherosclerosis","secondary_identifiers":["icd11.foundation:1280712786","SCTID:443502000","UMLS:C0010054","MEDGEN:3623","ICD9:414.00"],"synonyms":[{"name":"arteriosclerosis disorder of coronary artery","type":"exact"},{"name":"atherosclerosis of coronary artery","type":"broad"},{"name":"coronary artery arteriosclerosis (disease)","type":"exact"},{"name":"coronary artery arteriosclerosis disorder","type":"exact"},{"name":"coronary atherosclerosis","type":"exact"}],"termid":"MONDO:0021661","xrefs":{"Monarch":{"xref_id":"0021661"}}}


id: PBO:0060087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 34","termid":"PBO:0060087"}


id: MOD:02006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a stearoylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"S-stearoylated residue","termid":"MOD:02006"}


id: MONDO:0017230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"autosomal semi-dominant severe lipodystrophic laminopathy","secondary_identifiers":["UMLS:C5680783","Orphanet:280365","MEDGEN:1808090","GARD:21080"],"termid":"MONDO:0017230","xrefs":{"Monarch":{"xref_id":"0017230"}}}


id: GO:1904735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid beta-oxidation using acyl-CoA dehydrogenase.","definition_xrefs":["GO_REF:0000058","PMID:25416781","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid beta-oxidation","termid":"GO:0031998"},{"relation_name":"regulates","term_name":"fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:0033539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase","termid":"GO:1904735"}


id: PBO:0044287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 51A","termid":"PBO:0044287"}


id: GO:0043865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of methionine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"methionine transmembrane transporter activity","secondary_identifiers":["GO:1990240"],"synonyms":[{"name":"methionine importer","type":"related"},{"name":"methionine importer activity","type":"narrow"},{"name":"methionine importing activity","type":"narrow"},{"name":"methionine-importing activity","type":"narrow"}],"termid":"GO:0043865"}


id: GO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Movement of a MAP kinase to the nucleus in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK during sporulation (sensu Saccharomyces) (obsolete GO:0000207)","synonyms":[{"name":"nuclear translocation of MAPK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000207"}


id: PBO:0089172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein repair carboxyl methyl esterase","termid":"PBO:0089172"}


id: GO:1905736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24344203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proline import across plasma membrane","termid":"GO:1902835"},{"relation_name":"is_a","term_name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"},{"relation_name":"negatively_regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of L-proline import across plasma membrane","termid":"GO:1905736"}


id: PBO:0087274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET-domain lysine-N-methyltransferase; catalyzes the formation of dimethyllysine residues on the large ribosomal subunit proteins L23 (Rpl23Ap and Rpl23Bp) and monomethyllysine residues on L18 (Rps18Ap and Rps18Bp)","termid":"PBO:0087274"}


id: PBO:0025490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2 Ubc4/UbcP1","termid":"PBO:0025490"}


id: GO:0019715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid to form peptidyl-L-erythro-beta-hydroxyaspartic acid; catalyzed by peptide-aspartate beta-dioxygenase (EC:1.14.11.16).","definition_xrefs":["RESID:AA0027"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid hydroxylation to form L-erythro-beta-hydroxyaspartic acid (obsolete GO:0019715)","termid":"GO:0019715"}


id: PBO:0005831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase [NADP+] Tyr1 (predicted)","termid":"PBO:0005831"}


id: PBO:0055167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2589","termid":"PBO:0055167"}


id: PBO:0049523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Q variant histone 1, pseudogene","termid":"PBO:0049523"}


id: PBO:0030145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_leptomycin_B","termid":"PBO:0030145"}


id: MONDO:0014577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous mutation in the CEP120 gene on chromosome 5q23.","definition_xrefs":["PMID:25361962","DOID:0110093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 13 with or without polydactyly","secondary_identifiers":["MEDGEN:898712","GARD:16079","UMLS:C4225378","OMIM:616300"],"synonyms":[{"name":"SRTD13","type":"exact"},{"name":"short-rib thoracic dysplasia 13 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014577","xrefs":{"Monarch":{"xref_id":"0014577"}}}


id: GO:0004177
data:
  {"annotated_genes":["SJAG_06636","SJAG_03022","SJAG_03744","SJAG_01896","SJAG_02033","SJAG_00969","SJAG_01088","SJAG_00181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64733,63244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004239"},{"annotations":[74324,64732,65526,116293,60601,99625,57898,76156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain.","definition_xrefs":["EC:3.4.11.-","PMID:24157837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00969":null,"SJAG_01088":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_03022":null,"SJAG_03744":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0140096","GO:0008233","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aminopeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2534096","https://www.ebi.ac.uk/merops/about/glossary.shtml#AMINOPEPTIDASE","Reactome:R-HSA-1236954","MetaCyc:RXN0-5052","Reactome:R-HSA-983162"],"termid":"GO:0004177","terms_by_termid":{"GO:0004239":null,"GO:0070006":null}}


id: GO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Cypridina luciferin + O2 = oxidized Cypridina luciferin + CO2 + light.","definition_xrefs":["EC:1.13.12.6","MetaCyc:CYPRIDINA-LUCIFERIN-2-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"Cypridina-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:22760"],"synonyms":[{"name":"Cypridina luciferase activity","type":"related"},{"name":"Cypridina-luciferin:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"Cypridina-type luciferase activity","type":"related"},{"name":"luciferase (Cypridina luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047712"}


id: MOD:00252
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue to the polymer keratan sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["PubMed:1417734","RESID:AA0247","PubMed:3472204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"keratan sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","synonyms":[{"name":"keratan sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-threonine","type":"exact"},{"name":"keratosulfate","type":"exact"},{"name":"poly[beta-1,4-(2-acetamido-2-deoxy-6-sulfate D-glucosyl)-beta-1,3-D-galactosyl]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-threonine","type":"exact"}],"termid":"MOD:00252"}


id: PBO:0004693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc1","termid":"PBO:0004693"}


id: PBO:0041412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 25","termid":"PBO:0041412"}


id: PBO:0057066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 148a","termid":"PBO:0057066"}


id: PBO:0078036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 26","termid":"PBO:0078036"}


id: PR:O74455
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 6-phosphogluconolactonase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11054:SF0","PRO:DNx","OMA:SCHPO04412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.10","secondary_identifiers":["UniProtKB:O74455"],"synonyms":[{"name":"6PGL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGLS","type":"exact"}],"termid":"PR:O74455"}


id: GO:0043862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arginine(out) + agmatine(in) = arginine(in) + agmatine(out).","definition_xrefs":["PMID:17099215","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"arginine:agmatine antiporter activity","synonyms":[{"name":"AdiC","type":"related"},{"name":"arginine-agmatine antiporter activity","type":"exact"},{"name":"arginine-agmatine exchange transporter activity","type":"exact"},{"name":"arginine/agmatine antiporter activity","type":"exact"}],"termid":"GO:0043862"}


id: GO:1904418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomeric loop formation.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","PMID:22579284","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"regulates","term_name":"telomeric loop formation","termid":"GO:0031627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"regulation of telomeric loop formation","synonyms":[{"name":"regulation of t-loop biosynthesis","type":"exact"},{"name":"regulation of t-loop formation","type":"exact"}],"termid":"GO:1904418"}


id: GO:0048095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-specific pigmentation","termid":"GO:0048071"},{"relation_name":"part_of","term_name":"female sex differentiation","termid":"GO:0046660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female pigmentation","termid":"GO:0048095"}


id: GO:0003321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased by the chemicals epinephrine and norepinephrine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"},{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}


id: PBO:0063594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 7","termid":"PBO:0063594"}


id: PBO:0048495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR55 cis regulatory suppressor of immune response RNA","termid":"PBO:0048495"}


id: GO:1901290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of succinyl-CoA.","definition_xrefs":["UniPathway:UPA00929","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"succinyl-CoA biosynthetic process","secondary_identifiers":["Reactome:R-HSA-9853506"],"synonyms":[{"name":"succinyl-CoA anabolism","type":"exact"},{"name":"succinyl-CoA biosynthesis","type":"exact"},{"name":"succinyl-CoA formation","type":"exact"},{"name":"succinyl-CoA synthesis","type":"exact"}],"termid":"GO:1901290"}


id: MONDO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skin condition caused by Mycobacterium marinum, characterized by a skin lesion that presents roughly three weeks after exposure.","definition_xrefs":["Wikipedia:Aquarium_granuloma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycobacterial infectious disease","termid":"MONDO:0020590"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aquarium granuloma","secondary_identifiers":["MESH:C535526","UMLS:C0275708","MEDGEN:78814","SCTID:240417004"],"synonyms":[{"name":"M. marinum","type":"related"},{"name":"Mycobacterium marinum caused skin disease","type":"exact"},{"name":"Mycobacterium marinum infection","type":"related"},{"name":"Mycobacterium marinum skin disease","type":"exact"},{"name":"aquarium granuloma","type":"exact"},{"name":"fish tank granuloma","type":"exact"},{"name":"swimming pool granuloma","type":"related"}],"termid":"MONDO:0043314","xrefs":{"Monarch":{"xref_id":"0043314"}}}


id: FYPO:0006278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an O-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PMID:22988247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0003290","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abnormal O-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal O-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006278"}


id: MONDO:0011810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Horizontal gaze palsy with progressive scoliosis (HGPPS) is a rare congenital autosomal recessive disease, presenting in children and adolescents, and characterized by progressive scoliosis along with the absence of conjugate horizontal eye movements and associated with failure of the somatosensory and corticospinal neuronal tracts to decussate in the medulla.","definition_xrefs":["Orphanet:2744"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horizontal gaze palsy with progressive scoliosis","secondary_identifiers":["MESH:C564593","OMIMPS:607313","GARD:12682","SCTID:702381007","ICD10CM:H49.4","icd11.foundation:226403142","ICD9:737.43","MEDGEN:339538","UMLS:C1846496"],"synonyms":[{"name":"HGPPS","type":"exact"},{"name":"gaze palsy, familial horizontal, with progressive scoliosis","type":"related"},{"name":"gaze palsy, horizontal, with progressive scoliosis","type":"related"},{"name":"ophthalmoplegia, progressive external, and scoliosis","type":"related"},{"name":"progressive external ophthalmoplegia and scoliosis","type":"exact"}],"termid":"MONDO:0011810","xrefs":{"Monarch":{"xref_id":"0011810"}}}


id: PATO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000417 absolute number value (obsolete PATO:0000417)","termid":"PATO:0000417"}


id: SO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of five consecutive residues and two hydrogen bonds in which: residue(i) is Serine (S) or Threonine (T), the side-chain O of residue(i) is H-bonded to the main-chain NH of residue(i+2) or (i+3) , the main-chain CO group of residue(i) is H-bonded to the main-chain NH of residue(i+3) or (i+4).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"serine_threonine_motif","secondary_identifiers":["BS:00229"],"synonyms":[{"name":"serine/threonine motif","type":"exact"},{"name":"st motif","type":"exact"},{"name":"st_motif","type":"exact"}],"termid":"SO:0001126"}


id: GO:2000633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pre-microRNA processing.","definition_xrefs":["GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of miRNA processing","termid":"GO:1903800"},{"relation_name":"is_a","term_name":"regulation of pre-miRNA processing","termid":"GO:2000631"},{"relation_name":"positively_regulates","term_name":"pre-miRNA processing","termid":"GO:0031054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pre-miRNA processing","synonyms":[{"name":"positive regulation of miRNA maturation","type":"exact"},{"name":"positive regulation of pre-microRNA processing","type":"exact"}],"termid":"GO:2000633"}


id: MONDO:0100019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paroxysmal dyskinesia which manifest as dystonic movements brought on by sustained exercise, that is correlated with a deficiency in the gene ECHS1 (caused by a missence mutation). Onset is typically between age two and four years.","definition_xrefs":["PMID:28039521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia","termid":"MONDO:0015427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"ECHS1-related paroxysmal dyskinesia","synonyms":[{"name":"ECHS1 deficiency-associated paroxysmal exercise-induced dyskinesia","type":"exact"}],"termid":"MONDO:0100019","xrefs":{"Monarch":{"xref_id":"0100019"}}}


id: MONDO:0005893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the pancreas. The mitotic count is more than 20 per 10 HPF. According to the size of the malignant cells, the prominence of the nucleoli, and the amount of cytoplasm, it is classified either as small or large cell neuroendocrine carcinoma.","definition_xrefs":["NCIT:C3770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine neoplasm","termid":"MONDO:0005815"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"},{"relation_name":"is_a","term_name":"malignant pancreatic neoplasm","termid":"MONDO:0009831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic endocrine carcinoma","secondary_identifiers":["DOID:1798","EFO:0007416","MEDGEN:233070","ICD9:157.4","ICD10CM:C25.4","ICDO:8150/3","MESH:D018273","SCTID:254612002","UMLS:C1328479","GARD:22056","Orphanet:506098"],"synonyms":[{"name":"Pancreatic Neuroendocrine cancer","type":"exact"},{"name":"carcinoma of endocrine pancreas","type":"exact"},{"name":"carcinoma, islet cell, malignant","type":"exact"},{"name":"endocrine pancreas carcinoma","type":"exact"},{"name":"high grade pancreatic neuroendocrine carcinoma","type":"exact"},{"name":"high-grade pancreatic neuroendocrine carcinoma","type":"exact"},{"name":"islet cell cancer","type":"exact"},{"name":"islet cell carcinoma","type":"exact"},{"name":"islet cell carcinoma (morphologic abnormality)","type":"exact"},{"name":"malignant islet cell tumor","type":"exact"},{"name":"malignant islet cell tumour","type":"exact"},{"name":"malignant neoplasm of islets of Langerhans","type":"exact"},{"name":"malignant pancreatic endocrine tumor","type":"exact"},{"name":"malignant pancreatic endocrine tumour","type":"exact"},{"name":"neuroendocrine carcinoma of pancreas","type":"related"},{"name":"pancreatic NEC","type":"exact"},{"name":"pancreatic NEC G3","type":"exact"},{"name":"pancreatic endocrine cancer","type":"exact"},{"name":"pancreatic endocrine carcinoma","type":"exact"},{"name":"pancreatic neuroendocrine carcinoma","type":"exact"},{"name":"poorly differentiated pancreatic endocrine carcinoma","type":"exact"},{"name":"poorly-differentiated NEN of pancreas","type":"exact"},{"name":"poorly-differentiated neuroendocrine neoplasm of pancreas","type":"exact"},{"name":"poorly-differentiated pancreatic NEN","type":"exact"},{"name":"poorly-differentiated pancreatic neuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0005893","xrefs":{"Monarch":{"xref_id":"0005893"}}}


id: PBO:0074252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B3","termid":"PBO:0074252"}


id: PBO:0029290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_DSR-containing_meiosis_gene_mRNA_during_vegetative_growth","termid":"PBO:0029290"}


id: GO:0018770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2Z,4Z,7-trienoate + H2O = 2-(4'-chlorophenyl)-3,3-dichloropropenoate + cis-2-Hydroxy-3-chloropenta-2,4-dienone + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate hydrolase activity (obsolete GO:0018770)","termid":"GO:0018770"}


id: GO:0018785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: haloacetate + H2O = glycolate + halide.","definition_xrefs":["EC:3.8.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"haloacetate dehalogenase activity","secondary_identifiers":["UM-BBD_enzymeID:r1028","MetaCyc:HALOACETATE-DEHALOGENASE-RXN","RHEA:11044","UM-BBD_enzymeID:r0004"],"synonyms":[{"name":"haloacetate halidohydrolase activity","type":"related"},{"name":"monohaloacetate dehalogenase activity","type":"related"}],"termid":"GO:0018785"}


id: GO:0008364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based pupal cuticle. At the end of the prepupal period the insect is covered by the pupal cuticle which continues to be elaborated into the pupal period. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development involved in chitin-based cuticle molting cycle","termid":"GO:0042337"},{"relation_name":"part_of","term_name":"pupal development","termid":"GO:0035209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupal chitin-based cuticle development","synonyms":[{"name":"pupal cuticle anabolism","type":"broad"},{"name":"pupal cuticle formation","type":"broad"},{"name":"pupal cuticle synthesis","type":"broad"}],"termid":"GO:0008364"}


id: PATO:0001393
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing an integral multiple of the monoploid number, possibly excluding the sex-determining chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Euploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ploidy","termid":"PATO:0001374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euploid","termid":"PATO:0001393"}


id: PBO:0003247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3-phosphate dehydrogenase Gpd3","termid":"PBO:0003247"}


id: GO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by endosomal resident proteases contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteolysis within endosome associated with antigen processing and presentation","synonyms":[{"name":"endosomal proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002499"}


id: GO:0140968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of various organic cations in exchange for a proton, according to the reaction: H+(out) + organic cation(in) = H+(in) + organic cation(out). The transported substrates are usually toxic molecules, drugs and xenobiotics.","definition_xrefs":["PMID:17047166","PMID:17509534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"polyspecific organic cation:proton antiporter activity","secondary_identifiers":["TC:2.A.66.1.20"],"synonyms":[{"name":"proton:polyspecific organic cation antiporter activity","type":"related"}],"termid":"GO:0140968"}


id: GO:1901770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of daunorubicin.","definition_xrefs":["PMID:7601857","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"daunorubicin catabolic process","synonyms":[{"name":"daunorubicin breakdown","type":"exact"},{"name":"daunorubicin catabolism","type":"exact"},{"name":"daunorubicin degradation","type":"exact"}],"termid":"GO:1901770"}


id: MONDO:0014545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the CERS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"progressive myoclonic epilepsy type 8","secondary_identifiers":["DOID:0111451","OMIM:616230","Orphanet:424027","UMLS:C5190825","MEDGEN:1680582","GARD:17706"],"synonyms":[{"name":"CERS1 progressive myoclonic epilepsy","type":"exact"},{"name":"EPM8","type":"exact"},{"name":"PME type 8","type":"exact"},{"name":"epilepsy, progressive myoclonic, 8","type":"related"},{"name":"epilepsy, progressive myoclonic, type 8","type":"exact"},{"name":"progressive myoclonic epilepsy caused by mutation in CERS1","type":"exact"},{"name":"progressive myoclonic epilepsy due to CERS1 deficiency","type":"exact"},{"name":"progressive myoclonus epilepsy type 8","type":"exact"}],"termid":"MONDO:0014545","xrefs":{"Monarch":{"xref_id":"0014545"}}}


id: GO:0120097
data:
  {"annotated_genes":["SJAG_00295","SJAG_06425"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91326,92994],"is_not":false,"summary":null,"term":"GO:0120097"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the second mannose to the glycosylphosphatidylinositol (GPI) during GPI precursor assembly. In yeast S. cerevisiae this complex consists of GPI18p and PGA1p.","definition_xrefs":["GOC:bhm","PMID:17615295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase II complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:0120097","terms_by_termid":{"GO:0120097":null}}


id: PBO:0069989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1284, pseudogene","termid":"PBO:0069989"}


id: PBO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-Alpha-Acetyltransferase","termid":"PBO:0002204"}


id: GO:0018629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quinolin-2-ol + NADH + H+ + O2 = 2,5,6-trihydroxy-5,6-dihydroquinoline + NAD+.","definition_xrefs":["EC:1.14.12.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyquinoline 5,6-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.12.16-RXN","UM-BBD_reactionID:r0052","RHEA:10976"],"synonyms":[{"name":"2-oxo-1,2-dihydroquinoline 5,6-dioxygenase activity","type":"exact"},{"name":"quinolin-2(1H)-one 5,6-dioxygenase activity","type":"related"},{"name":"quinolin-2-ol 5,6-dioxygenase activity","type":"related"},{"name":"quinolin-2-ol,NADH:oxygen oxidoreductase (5,6-hydroxylating)","type":"related"}],"termid":"GO:0018629"}


id: GO:0021999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"neural plate regionalization","termid":"GO:0060897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate anterior/posterior regionalization","synonyms":[{"name":"neural plate anterior/posterior pattern formation","type":"related"}],"termid":"GO:0021999"}


id: PBO:0014243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit Mdm10 (predicted)","termid":"PBO:0014243"}


id: GO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of signal transduction in another organism (obsolete GO:0044501)","synonyms":[{"name":"modulation of signal transduction in another organism","type":"exact"},{"name":"modulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044501"}


id: MONDO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A focal dystonia that is characterized by a prolonged involuntary upward deviation of the eyes.","definition_xrefs":["DOID:0050842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"oculogyric crisis","secondary_identifiers":["icd11.foundation:1191930451","MEDGEN:43221","UMLS:C0085637"],"termid":"MONDO:0000483","xrefs":{"Monarch":{"xref_id":"0000483"}}}


id: GO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of glial cell proliferation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"positively_regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell proliferation","termid":"GO:0060252"}


id: GO:0019649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways in which formaldehyde is processed and used as a carbon source for the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde assimilation","termid":"GO:0019649"}


id: PR:Q12519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC330.07c gene.","definition_xrefs":["UniProtKB:Q12519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C330.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.07c","synonyms":[{"name":"Spom972h-SPCC330.07c","type":"exact"}],"termid":"PR:Q12519"}


id: GO:1904748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22801495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"apoptotic process involved in development","termid":"GO:1902742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in development","synonyms":[{"name":"regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1904748"}


id: PR:O94244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone-binding protein RBBP4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04372","PANTHER:PTHR22850:SF27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase type B subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.10","secondary_identifiers":["UniProtKB:O94244"],"synonyms":[{"name":"Spom972h-RBBP4","type":"exact"},{"name":"kinetochore protein mis16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94244"}


id: PR:P39825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A profilin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01076","PANTHER:PTHR11604:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.15c","secondary_identifiers":["UniProtKB:P39825"],"synonyms":[{"name":"Spom972h-PFN4","type":"exact"}],"termid":"PR:P39825"}


id: MONDO:0010305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked creatine transporter deficiency (CRTR-D) is a creatine deficiency syndrome characterized clinically by global developmental delay/ intellectual disability (DD/ID) with prominent speech/language delay, autistic behavior and seizures.","definition_xrefs":["Orphanet:52503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral creatine deficiency syndrome","termid":"MONDO:0000456"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"creatine transporter deficiency","secondary_identifiers":["NORD:1966","NANDO:1201035","OMIM:300352","SCTID:698290008","UMLS:C1845862","NCIT:C125665","DOID:0050800","MEDGEN:337451","MESH:C535598","GARD:1608","ICD9:758.81","NANDO:2201301"],"synonyms":[{"name":"CCDS1","type":"related"},{"name":"SLC6A8 deficiency","type":"exact"},{"name":"X-linked creatine deficiency","type":"related"},{"name":"X-linked creatine deficiency syndrome","type":"related"},{"name":"X-linked creatine transporter deficiency","type":"related"},{"name":"cerebral creatine deficiency syndrome 1","type":"exact"},{"name":"cerebral creatine deficiency syndrome 1, X-linked recessive","type":"exact"},{"name":"cerebral creatine deficiency syndrome type 1","type":"exact"},{"name":"creatine deficiency syndrome, X-linked","type":"related"},{"name":"creatine deficiency, X-linked","type":"related"},{"name":"creatine transporter defect","type":"related"},{"name":"creatine transporter deficiency","type":"exact"},{"name":"intellectual disability, X-linked with seizures, short stature and midface hypoplasia","type":"related"},{"name":"intellectual disability, X-linked, with creatine Transport deficiency","type":"related"},{"name":"intellectual disability, X-linked, with creatine transport deficiency","type":"related"},{"name":"intellectual disability, X-linked, with seizures, short stature, and midface hypoplasia","type":"related"},{"name":"mental retardation, X-linked with seizures, short stature and midface hypoplasia","type":"related"},{"name":"mental retardation, X-linked, with creatine Transport deficiency","type":"related"},{"name":"mental retardation, X-linked, with creatine transport deficiency","type":"related"},{"name":"mental retardation, X-linked, with seizures, short stature, and midface hypoplasia","type":"related"}],"termid":"MONDO:0010305","xrefs":{"Monarch":{"xref_id":"0010305"}}}


