# terms

id: PR:O43065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TATA-binding protein-associated factor 172 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03351","PANTHER:PTHR10799:SF225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mot1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1826.01c","secondary_identifiers":["UniProtKB:O43065"],"synonyms":[{"name":"Spom972h-BTAF1","type":"exact"},{"name":"TBP-associated factor mot1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"modifier of transcription 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43065"}


id: GO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A protein to which cyclosporin A (an immunosuppressant) binds. Possesses peptidyl-prolyl isomerase activity.","definition_xrefs":["ISBN:0198506732","EC:5.2.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclophilin (obsolete GO:0004600)","synonyms":[{"name":"cyclophilin","type":"exact"}],"termid":"GO:0004600"}


id: PATO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a short and stout cylindrical shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peg-like","termid":"PATO:0002535"}


id: PBO:0072766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein B","termid":"PBO:0072766"}


id: GO:0051008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Hsp27 proteins, a lightweight heat shock protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock protein binding","termid":"GO:0031072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"Hsp27 protein binding","termid":"GO:0051008"}


id: FYPO:0004201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PMID:20211136","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased centromeric outer repeat transcript level","termid":"FYPO:0003094"},{"relation_name":"is_a","term_name":"decreased siRNA level","termid":"FYPO:0004205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased centromeric outer repeat transcript-derived siRNA level","synonyms":[{"name":"decreased accumulation of centromeric outer repeat transcript-derived siRNA","type":"exact"},{"name":"decreased accumulation of siRNAs homologous to outer repeats","type":"related"},{"name":"decreased centromere outer repeat transcript-derived siRNA level","type":"exact"},{"name":"decreased centromeric outer repeat transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased centromeric outer repeat transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"decreased level of centromeric outer repeat transcript-derived siRNA","type":"exact"},{"name":"decreased level of siRNAs homologous to outer repeats","type":"exact"},{"name":"reduced centromeric outer repeat transcript-derived siRNA level","type":"exact"}],"termid":"FYPO:0004201"}


id: PBO:0050025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ alpha 1","termid":"PBO:0050025"}


id: PBO:0053833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1098","termid":"PBO:0053833"}


id: MONDO:0800026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disease due to a severely impaired central autonomic control of breathing and dysfunction of the autonomous nervous system. The incidence is estimated to be at 1 of 200 000 livebirths. A heterozygous mutation of PHOX-2B gene is found in 90% of the patients. Association with a Hirschsprung's disease is observed in 16% of the cases. Despite a high mortality rate and a lifelong dependence to mechanical ventilation, the long-term outcome of CCHS should be ultimately improved by multidisciplinary and coordinated follow-up of the patients.","definition_xrefs":["Orphanet:661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"central hypoventilation syndrome, congenital","termid":"MONDO:0800031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"central hypoventilation syndrome, congenital, 1, with or without Hirschsprung disease","secondary_identifiers":["DOID:0060731","SCTID:230499002","MedDRA:10007982","GARD:8535","MedDRA:10066131","OMIM:209880","MEDGEN:1794285","icd11.foundation:1750742010","UMLS:C5562075","ICD10CM:G47.3","NCIT:C98889"],"synonyms":[{"name":"CCHS","type":"exact"},{"name":"CCHS with Hirschsprung disease","type":"related"},{"name":"Haddad syndrome","type":"related"},{"name":"Ondine curse","type":"exact"},{"name":"Ondine curse (formerly)","type":"related"},{"name":"Ondine curse, congenital","type":"exact"},{"name":"Ondine syndrome","type":"exact"},{"name":"Ondine's curse (formerly)","type":"related"},{"name":"Ondine-Hirschsprung disease","type":"related"},{"name":"autonomic control, congenital failure of","type":"exact"},{"name":"central congenital hypoventilation syndrome","type":"exact"},{"name":"central hypoventilation syndrome, congenital","type":"related"},{"name":"congenital Ondine curse","type":"exact"},{"name":"congenital central alveolar hypoventilation syndrome","type":"exact"},{"name":"congenital central hypoventilation","type":"exact"},{"name":"congenital central hypoventilation syndrome","type":"exact"},{"name":"congenital failure of autonomic control","type":"related"},{"name":"idiopathic congenital central alveolar hypoventilation","type":"related"},{"name":"primary alveolar hypoventilation","type":"related"}],"termid":"MONDO:0800026","xrefs":{"Monarch":{"xref_id":"0800026"}}}


id: GO:0120257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-threonine.","definition_xrefs":["GOC:krc","PMID:22802624","PMID:16728640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine acetylation","termid":"GO:0120257"}


id: PBO:0077328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 64","termid":"PBO:0077328"}


id: GO:0016108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetraterpenoid metabolic process","synonyms":[{"name":"tetraterpene metabolic process","type":"narrow"},{"name":"tetraterpene metabolism","type":"narrow"},{"name":"tetraterpenoid metabolism","type":"exact"}],"termid":"GO:0016108"}


id: MONDO:1011318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder, non-human animal","termid":"MONDO:1011301"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hearing disorder, non-human animal","termid":"MONDO:1011318","xrefs":{"Monarch":{"xref_id":"1011318"}}}


id: GO:0042758
data:
  {"annotated_genes":["SJAG_04570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115602],"is_not":false,"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:20043225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acid breakdown","type":"exact"},{"name":"long-chain fatty acid catabolism","type":"exact"},{"name":"long-chain fatty acid degradation","type":"exact"}],"termid":"GO:0042758","terms_by_termid":{"GO:0042758":null}}


id: PBO:0076883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 35","termid":"PBO:0076883"}


id: MOD:00788
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["Unimod:363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopropylphosphotyrosine","synonyms":[{"name":"Isopropylphospho","type":"related"},{"name":"O-Isopropylphosphorylation","type":"related"}],"termid":"MOD:00788"}


id: MONDO:0010926
data:
  {"annotated_genes":["SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87211],"is_not":false,"summary":null,"term":"MONDO:0010926"}]},"cv_name":"mondo","definition":"Any familial hypocalciuric hypercalcemia in which the cause of the disease is a mutation in the AP2S1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypocalciuric hypercalcemia","termid":"MONDO:0018458"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial hypocalciuric hypercalcemia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600740","MEDGEN:322173","Orphanet:101050","DOID:0060702","MESH:C537147","UMLS:C1833372","GARD:2878"],"synonyms":[{"name":"AP2S1 familial hypocalciuric hypercalcemia","type":"exact"},{"name":"FBH3","type":"related"},{"name":"FBHOk","type":"related"},{"name":"FHH type 3","type":"exact"},{"name":"HHC3","type":"exact"},{"name":"familial benign hypercalcemia, Oklahoma variant","type":"related"},{"name":"familial benign hypercalcemia, type 3","type":"related"},{"name":"familial hypocalciuric hypercalcemia caused by mutation in AP2S1","type":"exact"},{"name":"familial hypocalciuric hypercalcemia type 3","type":"exact"},{"name":"hpocalciuric hypercalcemia, type III","type":"exact"},{"name":"hypercalcemia, familial benign, Oklahoma type","type":"related"},{"name":"hypercalcemia, familial benign, type 3","type":"related"},{"name":"hypocalciuric hypercalcemia type III","type":"exact"},{"name":"hypocalciuric hypercalcemia, familial, type 3","type":"related"},{"name":"hypocalciuric hypercalcemia, familial, type III","type":"related"}],"termid":"MONDO:0010926","terms_by_termid":{"MONDO:0010926":null},"xrefs":{"Monarch":{"xref_id":"0010926"}}}


id: GO:0075150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075150)","synonyms":[{"name":"regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075150"}


id: PBO:0057990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3914-2","termid":"PBO:0057990"}


id: MONDO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign breast neoplasm characterized by the proliferation of multiple papillomas within the lumen of the ducts.","definition_xrefs":["NCIT:C5201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal papillomatosis","termid":"MONDO:0021099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast papillomatosis","secondary_identifiers":["MEDGEN:235224","DOID:7511","UMLS:C1334247"],"synonyms":[{"name":"breast intraductal papillomatosis","type":"related"},{"name":"intraductal breast papillomatosis","type":"exact"},{"name":"intraductal papillomatosis of breast","type":"exact"},{"name":"intraductal papillomatosis of the breast","type":"exact"}],"termid":"MONDO:0004253","xrefs":{"Monarch":{"xref_id":"0004253"}}}


id: PR:Q09925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine palmitoyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01765","PANTHER:PTHR13693:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.08","secondary_identifiers":["UniProtKB:Q09925"],"synonyms":[{"name":"SPT 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPTLC2","type":"exact"},{"name":"long chain base biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09925"}


id: PBO:0111301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Prp39","termid":"PBO:0111301"}


id: GO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel activity","synonyms":[{"name":"mitoK-ATP activity","type":"exact"},{"name":"mitochondrial potassium channel activity","type":"exact"}],"termid":"GO:0062156"}


id: PBO:0081981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5C","termid":"PBO:0081981"}


id: GO:1990304
data:
  {"annotated_genes":["SJAG_00910"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78234],"is_not":false,"summary":null,"term":"GO:1990304"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of MUB1, RAD6 and UBR2 components. It ubiquitinates, and targets for destruction, the RPN4 transcription factor, which upregulates the proteasome genes. The binding of MUB1 may position the RPN4 ubiquitylation site proximal to the Ubiquitin-RAD6 thioester and allow the transfer of Ubiquitin from RAD6 to RPN4. One of its components, MUB1, is a short-lived protein ubiquitinated by the UBR2-RAD6 ubiquitin conjugating enzyme.","definition_xrefs":["GOC:bhm","PMID:18070918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00910":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MUB1-RAD6-UBR2 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990304","terms_by_termid":{"GO:1990304":null}}


id: GO:0018484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzaldehyde + NAD+ + H2O = 4-hydroxybenzoate + NADH + H+.","definition_xrefs":["EC:1.2.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:20305","UM-BBD_reactionID:r0273","MetaCyc:HYDROXYBENZALDEHYDE-OXIDATION-NAD-RXN","Reactome:R-HSA-9856794"],"synonyms":[{"name":"3-hydroxybenzaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"p-hydroxybenzaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0018484"}


id: GO:0018009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to a nitrogen (N) atom in an N-terminal cysteine residue to form N-palmitoyl-L-cysteine.","definition_xrefs":["RESID:AA0060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein palmitoylation","termid":"GO:0006500"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-L-cysteine N-palmitoylation","termid":"GO:0018009"}


id: GO:0043456
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77825],"is_not":false,"summary":null,"term":"GO:0043456"},{"annotations":[91466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the pentose-phosphate shunt, the process in which glucose is oxidized, coupled to NADPH synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of NADP metabolic process","termid":"GO:1902031"},{"relation_name":"regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0055086","GO:0006091"],"is_obsolete":false,"name":"regulation of pentose-phosphate shunt","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of pentose phosphate pathway","type":"exact"},{"name":"regulation of pentose phosphate shunt","type":"exact"},{"name":"regulation of pentose-phosphate pathway","type":"exact"}],"termid":"GO:0043456","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


id: PBO:0055304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2731","termid":"PBO:0055304"}


id: MONDO:0004516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male urethral cancer","termid":"MONDO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bulbomembranous urethral cancer","secondary_identifiers":["DOID:8259","MEDGEN:267917","UMLS:C1511339","NCIT:C39869"],"synonyms":[{"name":"bulbomembranous urethral malignant neoplasm","type":"exact"}],"termid":"MONDO:0004516","xrefs":{"Monarch":{"xref_id":"0004516"}}}


id: PBO:0004357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription corepressor (predicted)","termid":"PBO:0004357"}


id: PBO:0044164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin 2, pseudogene","termid":"PBO:0044164"}


id: MONDO:0019411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Genochondromatosis is characterized by chondromatosis, typically involving the clavicles, upper end of the humerus, and lower end of the femur. Lesions are bilateral and symmetrical. It has been described four patients from the same family and is transmitted as an autosomal dominant trait. Another disorder, genochondromatosis II, shows strong similarities to genochondromatosis but is characterized by the involvement of the short tubular bones and by normal clavicles. It has been described in one unrelated family. Genochondromatosis II may also be inherited as an autosomal dominant trait. Genochondromatosis has a benign clinical course.","definition_xrefs":["Orphanet:85197"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"genochondromatosis","termid":"MONDO:0007653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genochondromatosis type 1","secondary_identifiers":["MEDGEN:1761731","UMLS:C5438970","icd11.foundation:521879469","GARD:16741"],"termid":"MONDO:0019411","xrefs":{"Monarch":{"xref_id":"0019411"}}}


id: FYPO:0007716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tebuconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to tebuconazole","synonyms":[{"name":"resistance to tebuconazole during mitotic cell cycle","type":"related"},{"name":"resistance to tebuconazole during vegetative growth","type":"exact"},{"name":"resistant to tebuconazole","type":"exact"}],"termid":"FYPO:0007716"}


id: PBO:0042451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 4","termid":"PBO:0042451"}


id: GO:0051555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonols, a member of a class of vascular pigments formed by consecutive oxidative processes from the flavonoid intermediates flavanones and dihydroflavonols. Flavonols are the most widespread of the flavonoids and have a wide array of physiological activities.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"flavonol metabolic process","termid":"GO:0051554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonol biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3101"],"termid":"GO:0051555"}


id: PBO:0061050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL4 divergent transcript","termid":"PBO:0061050"}


id: PBO:0117252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 inhibitor, Ecl2","termid":"PBO:0117252"}


id: PBO:0070852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 5","termid":"PBO:0070852"}


id: PBO:0071001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 3","termid":"PBO:0071001"}


id: PBO:0028891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_transcribed_regions_during_vegetative_growth","termid":"PBO:0028891"}


id: PBO:0108933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MND1 pseudogene 1","termid":"PBO:0108933"}


id: PBO:0040035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 2","termid":"PBO:0040035"}


id: GO:0005085
data:
  {"annotated_genes":["SJAG_00514","SJAG_03581","SJAG_02529","SJAG_03089","SJAG_02819","SJAG_04837","SJAG_03488","SJAG_02027","SJAG_01699","SJAG_04615","SJAG_02833","SJAG_02486","SJAG_03678","SJAG_02368","SJAG_03246","SJAG_02645","SJAG_05210","SJAG_01415","SJAG_03600","SJAG_05184","SJAG_02471","SJAG_06588","SJAG_03142","SJAG_04010","SJAG_00807","SJAG_01309","SJAG_00216","SJAG_03002","SJAG_02004","SJAG_01576","SJAG_01025","SJAG_04653","SJAG_02493","SJAG_02307","SJAG_00858","SJAG_00064","SJAG_02160","SJAG_04491","SJAG_01659","SJAG_01030","SJAG_04982","SJAG_01367","SJAG_04464","SJAG_00143","SJAG_04771","SJAG_03705","SJAG_03704","SJAG_02248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57196,57494,57869,61694,62736,65823,66408,67632,70116,70850,71472,71657,71700,72362,73122,73596,73683,74038,74172,75602,75616,75826,76350,76855,77247,79138,79866,79896,80288,80696,81195,81808,82110,92774,92967,93893,94545,95820,96095,99090,99508,99752,100890,108227,108808,110131,117377,118345],"is_not":false,"summary":null,"term":"GO:0005085"}]},"cv_name":"molecular_function","definition":"Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions.","definition_xrefs":["GOC:mah","GOC:kd","PMID:23303910","PMID:27218782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase regulator 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exchange factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9695853","Reactome:R-HSA-156913","Reactome:R-HSA-9029158","Reactome:R-HSA-8876190","Reactome:R-HSA-9619803","Reactome:R-HSA-9693111","Reactome:R-HSA-9032798","Reactome:R-HSA-5637806","Reactome:R-HSA-751029","Reactome:R-HSA-8877998","GO:0017034","Reactome:R-HSA-5218829","Reactome:R-HSA-4093336","Reactome:R-HSA-416588","Reactome:R-HSA-5672965","Reactome:R-HSA-169904","Reactome:R-HSA-392054","Reactome:R-HSA-418579","Reactome:R-HSA-5655326","Reactome:R-HSA-6811429","Reactome:R-HSA-749453","Reactome:R-HSA-8851877","Reactome:R-HSA-8875318","Reactome:R-HSA-9018804","Reactome:R-HSA-399995","Reactome:R-HSA-9660824","Reactome:R-HSA-2029445","Reactome:R-HSA-3928651","Reactome:R-HSA-5654402","Reactome:R-HSA-1306972","GO:0008321","Reactome:R-HSA-442273","Reactome:R-HSA-354173","Reactome:R-HSA-445064","Reactome:R-HSA-9665700","Reactome:R-HSA-8877311","GO:0017112","Reactome:R-HSA-9036301","Reactome:R-HSA-9664991","Reactome:R-HSA-5617816","Reactome:R-HSA-3928628","Reactome:R-HSA-6811418","Reactome:R-HSA-1250383","Reactome:R-HSA-177938","Reactome:R-HSA-400092","Reactome:R-HSA-399938","Reactome:R-HSA-5694409","Reactome:R-HSA-379044","Reactome:R-HSA-428535","Reactome:R-HSA-379048","Reactome:R-HSA-442314","Reactome:R-HSA-1225957","Reactome:R-HSA-392195","Reactome:R-HSA-9672163","Reactome:R-HSA-5686071","GO:0005087","Reactome:R-HSA-9751201","Reactome:R-HSA-109817","Reactome:R-HSA-187746","Reactome:R-HSA-5686318","Reactome:R-HSA-9666428","Reactome:R-HSA-8875320","Reactome:R-HSA-5654618","Reactome:R-HSA-5623508","Reactome:R-HSA-5654426","Reactome:R-HSA-9665009","Reactome:R-HSA-350769","Reactome:R-HSA-2485180","Reactome:R-HSA-9013159","GO:0005090","Reactome:R-HSA-186834","Reactome:R-HSA-9014296","Reactome:R-HSA-9665707","Reactome:R-HSA-9666430","Reactome:R-HSA-3928632","Reactome:R-HSA-2730840","Reactome:R-HSA-3928592","Reactome:R-HSA-180687","Reactome:R-HSA-2029467","Reactome:R-HSA-418856","Reactome:R-HSA-203977","GO:0016219","Reactome:R-HSA-442291","Reactome:R-HSA-442732","GO:0017132","GO:0005086","Reactome:R-HSA-8875568","Reactome:R-HSA-418850","Reactome:R-HSA-9018825","Reactome:R-HSA-9680385","Reactome:R-HSA-5655277","GO:0016220","Reactome:R-HSA-419166","Reactome:R-HSA-9018817","Reactome:R-HSA-1433471","GO:0030676","Reactome:R-HSA-428750","Reactome:R-HSA-5654647","Reactome:R-HSA-109807","Reactome:R-HSA-5218850","Reactome:R-HSA-825631","Reactome:R-HSA-5654413","Reactome:R-HSA-8877308","Reactome:R-HSA-9013435","Reactome:R-HSA-9026891","Reactome:R-HSA-170979","Reactome:R-HSA-8876454","Reactome:R-HSA-9634418","Reactome:R-HSA-389348","Reactome:R-HSA-5654392","Reactome:R-HSA-5654663","Reactome:R-HSA-8876188","Reactome:R-HSA-9703441","Reactome:R-HSA-1250498","Reactome:R-HSA-3928642","Reactome:R-HSA-5623521","Reactome:R-HSA-8876616","Reactome:R-HSA-8964604","Reactome:R-HSA-8875591","Reactome:R-HSA-8982637","Reactome:R-HSA-9018747","Reactome:R-HSA-2424477","Reactome:R-HSA-5654600","Reactome:R-HSA-6807868","Reactome:R-HSA-428917","Reactome:R-HSA-9033292","GO:0005088","Reactome:R-HSA-9624845","Reactome:R-HSA-6811414","Reactome:R-HSA-3928612","Reactome:R-HSA-8876615","Reactome:R-HSA-416530","Reactome:R-HSA-8851899","Reactome:R-HSA-9607304","Reactome:R-HSA-9665408","GO:0005089","Reactome:R-HSA-177945","Reactome:R-HSA-2029451","Reactome:R-HSA-2424476","Reactome:R-HSA-420883","Reactome:R-HSA-1433415","Reactome:R-HSA-205039","Reactome:R-HSA-3965444","Reactome:R-HSA-5655241","Reactome:R-HSA-194518","Reactome:R-HSA-210977","Reactome:R-HSA-8876193","Reactome:R-HSA-8850041","Reactome:R-HSA-8876191","Reactome:R-HSA-9013109","Reactome:R-HSA-1250463","Reactome:R-HSA-8877475","Reactome:R-HSA-9014433","Reactome:R-HSA-389350","Reactome:R-HSA-5637808","Reactome:R-HSA-9670436","Reactome:R-HSA-9672170","Reactome:R-HSA-5655347","Reactome:R-HSA-9639286","Reactome:R-HSA-9017491","Reactome:R-HSA-8980691","Reactome:R-HSA-2179407","Reactome:R-HSA-939265","Reactome:R-HSA-9665404","Reactome:R-HSA-8848618","Reactome:R-HSA-1168636","Reactome:R-HSA-1225951","Reactome:R-HSA-9013143","Reactome:R-HSA-171026","GO:0008433","Reactome:R-HSA-3928633","Reactome:R-HSA-8851827","Reactome:R-HSA-8877813","Reactome:R-HSA-8982640","Reactome:R-HSA-392870","Reactome:R-HSA-8876837","GO:0019839","Reactome:R-HSA-9018768","Reactome:R-HSA-8877451","Reactome:R-HSA-5218839","Reactome:R-HSA-9640167","Reactome:R-HSA-380073","Reactome:R-HSA-9013023","Reactome:R-HSA-8877612","Reactome:R-HSA-9032067","Reactome:R-HSA-8877760","Reactome:R-HSA-114544"],"synonyms":[{"name":"ARF guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"GDP-dissociation stimulator activity","type":"exact"},{"name":"GDS","type":"exact"},{"name":"GEF","type":"exact"},{"name":"GNRP","type":"narrow"},{"name":"Rab guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rac guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ral guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ran guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rap guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ras guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rho guanine nucleotide exchange factor","type":"exact"},{"name":"Rho guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"RhoGEF","type":"exact"},{"name":"Sar guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"cAMP-dependent guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"guanyl-nucleotide release factor activity","type":"exact"},{"name":"guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:0005085","terms_by_termid":{"GO:0005085":null}}


id: GO:0032091
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97074,106956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"},{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein binding","type":"exact"},{"name":"down-regulation of protein binding","type":"exact"},{"name":"downregulation of protein binding","type":"exact"},{"name":"inhibition of protein binding","type":"narrow"}],"termid":"GO:0032091","terms_by_termid":{"GO:1904530":null}}


id: MONDO:0019567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in which the cause of the disease is a mutation in the COL5A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, classic type","termid":"MONDO:0007522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type, 1","secondary_identifiers":["MEDGEN:78660","NCIT:C125696","MESH:C536194","UMLS:C0268335","Orphanet:90309","SCTID:83470009","DOID:14720","OMIM:130000"],"synonyms":[{"name":"EDS I","type":"exact"},{"name":"EDSCL1","type":"exact"},{"name":"Ehlers-Danlos syndrome, classic type, 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, type I","type":"exact"},{"name":"type I Ehlers-Danlos syndrome","type":"exact"}],"termid":"MONDO:0019567","xrefs":{"Monarch":{"xref_id":"0019567"}}}


id: GO:0071543
data:
  {"annotated_genes":["SJAG_01154","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80959,107000],"is_not":false,"summary":null,"term":"GO:0071543"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a diphosphoinositol polyphosphate, 1,2,3,4,5,6-cyclohexanehexol with one or more diphosphate groups and multiple monophosphate groups attached.","definition_xrefs":["PMID:12387729","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diphosphoinositol polyphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"diphosphoinositol polyphosphate metabolism","type":"exact"}],"termid":"GO:0071543","terms_by_termid":{"GO:0071543":null}}


id: PBO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain","termid":"PBO:0000766"}


id: FYPO:0003138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the ascospore wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"},{"relation_name":"output_of","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002946","FYPO:0000121","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal ascospore wall morphology","synonyms":[{"name":"abnormal spore wall morphology","type":"exact"},{"name":"abnormal spore wall organization","type":"related"}],"termid":"FYPO:0003138"}


id: PBO:0005244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc4","termid":"PBO:0005244"}


id: GO:0035121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of the tail are generated and organized. The tail is the hindmost part of some animals.","definition_xrefs":["ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete tail morphogenesis (obsolete GO:0035121)","synonyms":[{"name":"tail morphogenesis","type":"exact"}],"termid":"GO:0035121"}


id: GO:0048703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the viscerocranium are generated and organized during the embryonic phase. The viscerocranium is the part of the skull comprising the facial bones.","definition_xrefs":["GOC:dsf","GOC:jid","PMID:16049113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic cranial skeleton morphogenesis","termid":"GO:0048701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic viscerocranium morphogenesis","synonyms":[{"name":"embryonic pharyngeal skeleton morphogenesis","type":"exact"}],"termid":"GO:0048703"}


id: MONDO:0859236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with neuromuscular and skeletal abnormalities","secondary_identifiers":["MEDGEN:1803456","OMIM:619833","UMLS:C5676965"],"termid":"MONDO:0859236","xrefs":{"Monarch":{"xref_id":"0859236"}}}


id: GO:0102758
data:
  {"annotated_genes":["SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74307],"is_not":false,"summary":null,"term":"GO:0102758"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain 2,3-saturated fatty acyl-CoA + NADP+ = a very-long-chain (2E)-enoyl-CoA + H+ + NADPH. This reaction is the fourth (reduction) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["PMID:16564093","PMID:19763486","RHEA:14473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"very-long-chain enoyl-CoA reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.3.1.93","MetaCyc:RXN-7711"],"termid":"GO:0102758","terms_by_termid":{"GO:0102758":null}}


id: PBO:0048682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 1","termid":"PBO:0048682"}


id: PBO:0034071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_apparent_orthology_relationship_with","termid":"PBO:0034071"}


id: PBO:0076504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 4","termid":"PBO:0076504"}


id: PBO:0059320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 3","termid":"PBO:0059320"}


id: MONDO:0018700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudohypoparathyroidism without Albright hereditary osteodystrophy (obsolete MONDO:0018700)","secondary_identifiers":["Orphanet:457062"],"termid":"MONDO:0018700","xrefs":{"Monarch":{"xref_id":"0018700"}}}


id: PBO:0082844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat protein required for ER transport vesicle budding; essential factor in endoplasmic reticulum exit site (ERES) formation, as well as in COPII-mediated ER-to-Golgi traffic; bound to periphery of ER membranes and may act to stabilize initial COPII complexes; interacts with Sec23p, Sec24p and Sec31p","termid":"PBO:0082844"}


id: GO:0032680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["PMID:10891884","GOC:mah","PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tumor necrosis factor production","secondary_identifiers":["GO:0042534","GO:1904467"],"synonyms":[{"name":"regulation of TNF production","type":"exact"},{"name":"regulation of TNF-alpha production","type":"exact"},{"name":"regulation of cachectin production","type":"exact"},{"name":"regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"regulation of tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032680"}


id: PBO:0057771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2117","termid":"PBO:0057771"}


id: PBO:0044910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA fragmentation factor subunit beta","termid":"PBO:0044910"}


id: GO:1903225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:23154389","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"negatively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endodermal cell differentiation","synonyms":[{"name":"down regulation of endoderm cell differentiation","type":"exact"},{"name":"down regulation of endodermal cell differentiation","type":"exact"},{"name":"down-regulation of endoderm cell differentiation","type":"exact"},{"name":"down-regulation of endodermal cell differentiation","type":"exact"},{"name":"downregulation of endoderm cell differentiation","type":"exact"},{"name":"downregulation of endodermal cell differentiation","type":"exact"},{"name":"inhibition of endoderm cell differentiation","type":"narrow"},{"name":"inhibition of endodermal cell differentiation","type":"narrow"},{"name":"negative regulation of endoderm cell differentiation","type":"exact"}],"termid":"GO:1903225"}


id: PBO:0048970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain and ankyrin repeats 1","termid":"PBO:0048970"}


id: PBO:0029653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_stress","termid":"PBO:0029653"}


id: GO:0044544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism initiates, promotes, or enhances the activation of plasminogen into plasmin in another organism via the action of a venom. This process includes cleavage at an internal Arg-Val site to form an N-terminal A-chain and C-terminal B-chain held together by a disulfide bond, and can include further proteolytic cleavage events to remove the preactivation peptide.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated fibrinolysis","termid":"GO:0044484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated plasminogen activation","synonyms":[{"name":"envenomation resulting in plasminogen activation in another organism","type":"exact"},{"name":"envenomation resulting in plasminogen activation in other organism","type":"exact"}],"termid":"GO:0044544"}


id: MONDO:0013774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated trigonocephaly in which the cause of the disease is a mutation in the FREM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated trigonocephaly","termid":"MONDO:0018065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly 2","secondary_identifiers":["UMLS:C3280974","MEDGEN:482604","GARD:18559","OMIM:614485"],"synonyms":[{"name":"FREM1 isolated trigonocephaly","type":"exact"},{"name":"TRIGNO2","type":"related"},{"name":"craniosynostosis, metopic","type":"related"},{"name":"isolated trigonocephaly caused by mutation in FREM1","type":"exact"},{"name":"trigonocephaly 2","type":"exact"},{"name":"trigonocephaly type 2","type":"exact"}],"termid":"MONDO:0013774","xrefs":{"Monarch":{"xref_id":"0013774"}}}


id: GO:1904584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polyamine macromolecule stimulus.","definition_xrefs":["PMID:20805360","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to polyamine macromolecule","termid":"GO:1904583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to polyamine macromolecule","synonyms":[{"name":"cellular response to polyamine","type":"exact"},{"name":"cellular response to polyamines","type":"exact"}],"termid":"GO:1904584"}


id: PBO:0027343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_primase_activity","termid":"PBO:0027343"}


id: PBO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 13","termid":"PBO:0080178"}


id: PBO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 2","termid":"PBO:0046071"}


id: PBO:0017622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0136 family mitochondrial protein, implicated in heme biosynthesis","termid":"PBO:0017622"}


id: MONDO:0033954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mast cell activation syndrome where KIT-mutated and clonal mast cells are detected.","definition_xrefs":["PMID:23409940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mast cell activation syndrome","termid":"MONDO:0100004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"monoclonal mast cell activation syndrome","secondary_identifiers":["NCIT:C181652","MEDGEN:1672509","GARD:12980","Orphanet:529468","UMLS:C4267893","ICD10CM:D89.41"],"synonyms":[{"name":"primary MCAS","type":"exact"},{"name":"primary mast cell activation syndrome","type":"exact"}],"termid":"MONDO:0033954","xrefs":{"Monarch":{"xref_id":"0033954"}}}


id: MOD:01211
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-(morpholine-2-acetyl)-lysine.","definition_xrefs":["Unimod:29#K","PubMed:10446193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morpholine-2-acetylated residue","termid":"MOD:01813"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(morpholine-2-acetyl)-lysine","synonyms":[{"name":"N-Succinimidyl-2-morpholine acetate","type":"related"},{"name":"N-succinimidylmorpholine-2-acetate N6-derivatized lysine","type":"exact"},{"name":"SMA","type":"related"}],"termid":"MOD:01211"}


id: PBO:0042184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B2","termid":"PBO:0042184"}


id: MONDO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process that affects the cervix. Causes include sexually transmitted diseases and bacterial infections. Clinical manifestations include abnormal vaginal bleeding and vaginal discharge.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervicitis","secondary_identifiers":["SCTID:37610005","DOID:2568","ICD10CM:N72","icd11.foundation:1433247301","MEDGEN:3338","HP:0030160","UMLS:C0007860","MESH:D002575","ICD9:616.0","NCIT:C26716"],"synonyms":[{"name":"cervicitis","type":"exact"},{"name":"cervicitis (disease)","type":"exact"}],"termid":"MONDO:0002345","xrefs":{"Monarch":{"xref_id":"0002345"}}}


id: FYECO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caspofungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ caspofungin","termid":"FYECO:0000392"}


id: MONDO:0011046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by short stature presenting in the neonatal period associated with osteochondrodysplastic lesions and facial dysmorphism.","definition_xrefs":["Orphanet:2867"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, Brussels type","secondary_identifiers":["GARD:4838","SCTID:719213009","UMLS:C1832439","OMIM:601350","MEDGEN:318625","MESH:C537121","icd11.foundation:251068104"],"synonyms":[{"name":"Mievis Verellen-Dumoulin syndrome","type":"related"},{"name":"Mievis-Verellen-Dumoulin syndrome","type":"exact"},{"name":"familial short stature with facial dysmorphism and osteochondrodysplastic lesions","type":"related"},{"name":"short stature syndrome, Brussels type","type":"related"}],"termid":"MONDO:0011046","xrefs":{"Monarch":{"xref_id":"0011046"}}}


id: PBO:0081528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 438","termid":"PBO:0081528"}


id: RO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_related_to","termid":"RO:0002330"}


id: PBO:0084794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in assembly of succinate dehydrogenase; has a role in maturation of the Sdh2p subunit; localized to the mitochondrial intermembrane space; required for acetate utilization and gluconeogenesis; mutation in Drosophila ortholog SDHAF3 causes reduced succinate dehydrogenase activity and neuronal and muscular dysfunction; member of the LYR protein family","termid":"PBO:0084794"}


id: GO:0035453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plastid membrane","termid":"GO:0035452"},{"relation_name":"part_of","term_name":"plastid inner membrane","termid":"GO:0009528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of plastid inner membrane","synonyms":[{"name":"extrinsic to plastid inner membrane","type":"narrow"},{"name":"peripheral to plastid inner membrane","type":"exact"}],"termid":"GO:0035453"}


id: GO:0010153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell expansion that results in an increase in cell size along the axis of an organ in a polarized fashion.","definition_xrefs":["PMID:11978864"],"gene_count":0,"genotype_count":0,"name":"obsolete polar cell elongation (obsolete GO:0010153)","synonyms":[{"name":"polar cell elongation","type":"exact"},{"name":"polarity-dependent cell elongation","type":"narrow"}],"termid":"GO:0010153"}


id: GO:0034703
data:
  {"annotated_genes":["SJAG_MIT37","SJAG_00542","SJAG_03114","SJAG_05204","SJAG_00836","SJAG_02598","SJAG_00438","SJAG_00133","SJAG_MIT15","SJAG_00915","SJAG_03925","SJAG_07003","SJAG_00985","SJAG_02105","SJAG_MIT09","SJAG_02564","SJAG_05229","SJAG_04122"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[120929,65412,65100,74421,105473,79507,60316,58027,117685,68536,109714,96623,120935,66145,68320,71860,120940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[76135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"An ion channel complex through which cations pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cation channel complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0034703","terms_by_termid":{"GO:0005891":null,"GO:0045259":null}}


id: GO:0052701
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105421,113369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[72612,105422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modified histidine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular histidine derivative metabolic process","type":"exact"},{"name":"cellular histidine derivative metabolism","type":"exact"},{"name":"cellular modified histidine metabolic process","type":"exact"},{"name":"cellular modified histidine metabolism","type":"exact"},{"name":"histidine derivative metabolic process","type":"exact"},{"name":"modified histidine metabolism","type":"exact"}],"termid":"GO:0052701","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: FYPO:0005433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination at one or more recombination hotspots is decreased to the background level. The basal rate of recombination (i.e. away from hotspots) may remain normal or may be decreased.","definition_xrefs":["PomBase:mah","PMID:12019258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic recombination at hotspot","synonyms":[{"name":"decreased meiotic recombination at recombination hotspot","type":"exact"},{"name":"hotspot-specific decreased meiotic recombination","type":"exact"},{"name":"reduced meiotic recombination at hotspot","type":"exact"}],"termid":"FYPO:0005433"}


id: GO:0018970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products such as gasoline and commonly used as a paint thinning agent and in other solvent applications.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene metabolic process","synonyms":[{"name":"methylbenzene metabolic process","type":"exact"},{"name":"methylbenzene metabolism","type":"exact"},{"name":"toluene metabolism","type":"exact"}],"termid":"GO:0018970"}


id: GO:1990560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a DNA methyltransferase.","definition_xrefs":["PMID:22880885"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methyltransferase binding (obsolete GO:1990560)","synonyms":[{"name":"DNA methyltransferase binding","type":"exact"}],"termid":"GO:1990560"}


id: GO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine diphosphate + H2O = thiamine monophosphate + phosphate.","definition_xrefs":["RHEA:27998","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"thiamine diphosphate phosphatase activity","synonyms":[{"name":"TPPase activity","type":"exact"},{"name":"thiamin pyrophosphatase activity","type":"exact"},{"name":"thiamin-pyrophosphatase activity","type":"exact"},{"name":"thiamine diphosphatase activity","type":"broad"},{"name":"thiamine pyrophosphatase activity","type":"exact"},{"name":"thiamine-diphosphatase activity","type":"exact"},{"name":"thiaminpyrophosphatase activity","type":"related"}],"termid":"GO:0004787"}


id: PBO:0072853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 3","termid":"PBO:0072853"}


id: PBO:0005195
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.1","termid":"PBO:0005195"}


id: FYPO:0001775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abnormal protein localization to eisosome filament","termid":"FYPO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to eisosome filament","synonyms":[{"name":"abolished protein localisation to eisosome filament","type":"exact"},{"name":"abolished protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"abolished protein localization to linear eisosome","type":"exact"},{"name":"protein localization to eisosome filament abolished","type":"exact"}],"termid":"FYPO:0001775"}


id: GO:0014823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an activity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to activity","synonyms":[{"name":"response to exercise","type":"related"}],"termid":"GO:0014823"}


id: GO:1905048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:26473732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metallopeptidase activity","synonyms":[{"name":"regulation of metalloprotease activity","type":"narrow"},{"name":"regulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905048"}


id: PATO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to progress, invade surrounding tissues or metastasize.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-malignant","synonyms":[{"name":"benign","type":"related"}],"termid":"PATO:0002096"}


id: GO:0014061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of norepinephrine secretion","synonyms":[{"name":"regulation of noradrenaline secretion","type":"exact"}],"termid":"GO:0014061"}


id: MONDO:0016969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 19","termid":"MONDO:0016937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 19","secondary_identifiers":["Orphanet:262986","MEDGEN:162782","GARD:20889","icd11.foundation:1595108486","UMLS:C0795871","MESH:C538311"],"synonyms":[{"name":"19q duplication","type":"related"},{"name":"19q trisomy","type":"related"},{"name":"Duplication 19q","type":"related"},{"name":"chromosome 19q duplication","type":"related"},{"name":"partial duplication of chromosome 19q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 19","type":"exact"},{"name":"partial trisomy 19q","type":"related"},{"name":"partial trisomy of chromosome 19q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 19","type":"exact"},{"name":"trisomy 19q","type":"related"}],"termid":"MONDO:0016969","xrefs":{"Monarch":{"xref_id":"0016969"}}}


id: GO:0061385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fibroblasts, resulting in the expansion of a fibroblast population that contributes to the shaping of the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"},{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast proliferation involved in heart morphogenesis","termid":"GO:0061385"}


id: PBO:0076102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 7","termid":"PBO:0076102"}


id: MONDO:0017351
data:
  {"annotated_genes":["SJAG_01061","SJAG_02388"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87180,87181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009388"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of aspartate family metabolism","termid":"MONDO:0037938"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01061":null,"SJAG_02388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn disorder of lysine and hydroxylysine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:237929000","icd11.foundation:367868681","ICD10CM:E72.3","GARD:21155","UMLS:C0268552","ICD9:270.8","ICD9:270.7","MEDGEN:541359","Orphanet:289832"],"synonyms":[{"name":"disorder of lysine and hydroxylysine metabolism","type":"related"}],"termid":"MONDO:0017351","terms_by_termid":{"MONDO:0009388":null},"xrefs":{"Monarch":{"xref_id":"0017351"}}}


id: PBO:0071153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 18","termid":"PBO:0071153"}


id: MONDO:0957220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte/zygote/embryo maturation arrest 17","secondary_identifiers":["MEDGEN:1841054","UMLS:C5830418","OMIM:620319"],"termid":"MONDO:0957220","xrefs":{"Monarch":{"xref_id":"0957220"}}}


id: GO:0031522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex involved in the translocation of proteins across the cytoplasmic membrane. In Gram-negative bacteria, Sec-translocated proteins are subsequently secreted via the type II, IV, or V secretion systems. Sec complex components include SecA, D, E, F, G, Y and YajC.","definition_xrefs":["PMID:15223057","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cell envelope Sec protein transport complex","synonyms":[{"name":"Sec complex","type":"broad"},{"name":"Sec secretion complex","type":"narrow"},{"name":"Sec translocation complex","type":"narrow"},{"name":"plasma membrane Sec complex","type":"related"}],"termid":"GO:0031522"}


id: GO:0010332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ionizing radiation","termid":"GO:0010212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gamma radiation","synonyms":[{"name":"response to gamma ray","type":"related"},{"name":"response to gamma-ray photon","type":"related"}],"termid":"GO:0010332"}


id: PBO:0058576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6513","termid":"PBO:0058576"}


id: MONDO:0014315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Mitchell-Riley syndrome (obsolete MONDO:0014315)","termid":"MONDO:0014315","xrefs":{"Monarch":{"xref_id":"0014315"}}}


id: PBO:0067110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 152, pseudogene","termid":"PBO:0067110"}


id: GO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:12956429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell homeostasis","synonyms":[{"name":"B lymphocyte homeostasis","type":"exact"},{"name":"B-cell homeostasis","type":"exact"},{"name":"B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001782"}


id: GO:0045567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045567)","synonyms":[{"name":"down regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"negative regulation of TRAIL receptor 2 synthesis","type":"exact"}],"termid":"GO:0045567"}


id: GO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acyl-carrier protein.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl-carrier-protein biosynthetic process (obsolete GO:0042967)","synonyms":[{"name":"ACP biosynthesis","type":"exact"},{"name":"ACP biosynthetic process","type":"exact"},{"name":"acyl carrier protein biosynthesis","type":"exact"},{"name":"acyl carrier protein biosynthetic process","type":"exact"},{"name":"acyl-carrier protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein anabolism","type":"exact"},{"name":"acyl-carrier-protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein formation","type":"exact"},{"name":"acyl-carrier-protein synthesis","type":"exact"}],"termid":"GO:0042967"}


id: PATO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete irregular shape (obsolete PATO:0000940)","termid":"PATO:0000940"}


id: PBO:0015238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractie ring myosin V regulator Rng8","termid":"PBO:0015238"}


id: RO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly regulates process(P2) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  regulates the kinase activity (P2) of protein B then P1 directly regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"RO:0002412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","termid":"RO:0002578"}


id: GO:0008388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced [NADPH-hemoprotein reductase] + O2 + a steroid = oxidized [NADPH-hemoprotein reductase] + H2O + H+ + 15alpha-hydroxy steroid.","definition_xrefs":["RHEA:83179","PMID:2703500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steroid 15-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2A4","type":"narrow"}],"termid":"GO:0008388"}


id: PBO:0052953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinectin 1","termid":"PBO:0052953"}


id: MONDO:0100081
data:
  {"annotated_genes":["SJAG_02104","SJAG_02724","SJAG_04457","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031044"},{"annotations":[86841,86842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014088"},{"annotations":[88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[87667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"}]},"cv_name":"mondo","definition":"A change from the patient's baseline sleeping pattern, in the hours slept and/or an alteration/dysfunction in the stages of sleep.","definition_xrefs":["NCIT:C3376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_02119":null,"SJAG_02724":null,"SJAG_04457":null},"genotype_count":0,"is_obsolete":false,"name":"sleep disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0851578","EFO:0008568","MEDGEN:208862"],"synonyms":[{"name":"disturbances, sleep","type":"exact"},{"name":"parasomnia","type":"related"},{"name":"sleep disturbance","type":"exact"},{"name":"sleep disturbances","type":"exact"}],"termid":"MONDO:0100081","terms_by_termid":{"MONDO:0011397":null,"MONDO:0013584":null,"MONDO:0014088":null,"MONDO:0031044":null},"xrefs":{"Monarch":{"xref_id":"0100081"}}}


id: GO:1905224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a clathrin-coated pit.","definition_xrefs":["GOC:PARL","PMID:26589353","GO_REF:0000079","GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete clathrin-coated pit assembly (obsolete GO:1905224)","synonyms":[{"name":"clathrin-coated pit formation","type":"exact"},{"name":"coated pit assembly","type":"exact"},{"name":"coated pit formation","type":"exact"}],"termid":"GO:1905224"}


id: GO:0010482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the physical partitioning and separation of an epidermal cell into daughter cells. An epidermal cell is any of the cells that make up the epidermis.","definition_xrefs":["PMID:17450124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"regulates","term_name":"epidermal cell division","termid":"GO:0010481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal cell division","synonyms":[{"name":"regulation of hypodermal cell division","type":"related"}],"termid":"GO:0010482"}


id: PATO:0002006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-D shape","synonyms":[{"name":"2-D projection","type":"related"},{"name":"cross-sectional","type":"related"}],"termid":"PATO:0002006"}


id: PBO:0017011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR36","termid":"PBO:0017011"}


id: GO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ternary complex consisting of VRK3, VHR (Dusp3), and ERK1 (Mapk3) existing in neuronal cells, and is involved in regulation of the ERK signaling pathway.","definition_xrefs":["PMID:16845380","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"VRK3/VHR/ERK complex","termid":"GO:0002167"}


id: PBO:0064279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M1","termid":"PBO:0064279"}


id: PBO:0044705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX5 pseudogene 1","termid":"PBO:0044705"}


id: FYPO:0006525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which sister kinetochores of a replicated chromosome separate prematurely when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:11598020","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"premature sister kinetochore separation during stationary phase","synonyms":[{"name":"split kinetochores during stationary phase","type":"related"}],"termid":"FYPO:0006525"}


id: PBO:0091625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfate transmembrane transporter Sul2","termid":"PBO:0091625"}


id: GO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanolamine metabolic process","termid":"GO:0006580"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine biosynthetic process","synonyms":[{"name":"ethanolamine anabolism","type":"exact"},{"name":"ethanolamine biosynthesis","type":"exact"},{"name":"ethanolamine formation","type":"exact"},{"name":"ethanolamine synthesis","type":"exact"}],"termid":"GO:0046335"}


id: PBO:0083732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential beta-coat protein of the COPI coatomer; involved in ER-to-Golgi protein trafficking and maintenance of normal ER morphology; shares 43% sequence identity with mammalian beta-coat protein (beta-COP)","termid":"PBO:0083732"}


id: PBO:0066870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 170","termid":"PBO:0066870"}


id: MONDO:1010934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in dogs due to a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb-girdle muscular dystrophy, SGCD-related, dog","secondary_identifiers":["OMIA:002122-9615"],"synonyms":[{"name":"muscular dystrophy, limb-girdle, type R6 (LGMDR6), dog","type":"related"}],"termid":"MONDO:1010934","xrefs":{"Monarch":{"xref_id":"1010934"}}}


id: GO:0008717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanyl-D-alanine endopeptidase activity (obsolete GO:0008717)","synonyms":[{"name":"D-alanyl-D-alanine endopeptidase activity","type":"exact"},{"name":"penicillin-binding protein 7","type":"narrow"},{"name":"penicillin-binding protein 8","type":"narrow"}],"termid":"GO:0008717"}


id: PBO:0078073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking kinesin protein 2","termid":"PBO:0078073"}


id: PBO:0031181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_acid_phosphatase_activity","termid":"PBO:0031181"}


id: GO:0140893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + amino acid(out) + Na+(out) = H+(out) + amino acid(in) + Na+(in).","definition_xrefs":["PMID:34704597","PMID:11698233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"neutral amino acid, sodium:proton antiporter activity","secondary_identifiers":["TC:2.A.18.6.8"],"synonyms":[{"name":"amino acid-coupled Na+/H+ exchanger activity","type":"exact"}],"termid":"GO:0140893"}


id: GO:0035259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear glucocorticoid receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nuclear glucocorticoid receptor binding","synonyms":[{"name":"glucocorticoid receptor binding","type":"broad"}],"termid":"GO:0035259"}


id: MONDO:0859692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired ataxia","termid":"MONDO:0016593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune-mediated cerebellar ataxia","secondary_identifiers":["Orphanet:623638","UMLS:C5680410","GARD:22494","MEDGEN:1814462"],"termid":"MONDO:0859692","xrefs":{"Monarch":{"xref_id":"0859692"}}}


id: GO:0030660
data:
  {"annotated_genes":["SJAG_04569","SJAG_02482","SJAG_00379","SJAG_04609","SJAG_04002","SJAG_00192","SJAG_04391","SJAG_01025","SJAG_04070","SJAG_01809","SJAG_02160","SJAG_04474","SJAG_02282","SJAG_04565","SJAG_02234","SJAG_01508","SJAG_04517"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114832,114620,62726,79315],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58991,66540],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[81588,65234,100232,75320,80028,79712,95000,108935,72546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[58162,64225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00379":null,"SJAG_01025":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Golgi-associated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle membrane","type":"related"}],"termid":"GO:0030660","terms_by_termid":{"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030663":null}}


id: PBO:0041311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 50","termid":"PBO:0041311"}


id: MONDO:1012729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cardiomyopathy characterized by death under stressful conditions that occurs in pigs due to a mutation in the DMD gene.","definition_xrefs":["PMID:22691118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porcine stress syndrome, DMD-related, pig","secondary_identifiers":["OMIA:001685-9823"],"synonyms":[{"name":"stress syndrome, DMD-related, pig","type":"exact"}],"termid":"MONDO:1012729","xrefs":{"Monarch":{"xref_id":"1012729"}}}


id: PBO:0041048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 4","termid":"PBO:0041048"}


id: PBO:0081712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF630 antisense RNA 1","termid":"PBO:0081712"}


id: GO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052219)","synonyms":[{"name":"negative energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052219"}


id: PBO:0055539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2975","termid":"PBO:0055539"}


id: PBO:0049020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 2","termid":"PBO:0049020"}


id: GO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"positively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephros development","termid":"GO:0072216"}


id: PATO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000073 relative_quality (obsolete PATO:0000073)","termid":"PATO:0000073"}


id: SO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_hydroxyuridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_hydroxyuridine","secondary_identifiers":["RNAMOD:060"],"synonyms":[{"name":"5-hydroxyuridine","type":"exact"},{"name":"five hydroxyuridine","type":"exact"},{"name":"ho5U","type":"exact"}],"termid":"SO:0001354"}


id: PBO:0068551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2, pseudogene","termid":"PBO:0068551"}


id: FYECO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Adenine was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000065 absence of adenine (obsolete FYECO:0000065)","termid":"FYECO:0000065"}


id: PBO:0068415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanylyltransferase and 5'-phosphatase pseudogene 1","termid":"PBO:0068415"}


id: PBO:0036114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0036114"}


id: PBO:0031186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_thiamine_diphosphokinase_activity","termid":"PBO:0031186"}


id: PBO:0065556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 2","termid":"PBO:0065556"}


id: GO:0002796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"positive regulation of peptide secretion","termid":"GO:0002793"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide secretion","synonyms":[{"name":"activation of antimicrobial peptide secretion","type":"narrow"},{"name":"stimulation of antimicrobial peptide secretion","type":"narrow"},{"name":"up regulation of antimicrobial peptide secretion","type":"exact"},{"name":"up-regulation of antimicrobial peptide secretion","type":"exact"},{"name":"upregulation of antimicrobial peptide secretion","type":"exact"}],"termid":"GO:0002796"}


id: PBO:0055608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3047","termid":"PBO:0055608"}


id: PBO:0074928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96A","termid":"PBO:0074928"}


id: PBO:0077705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin I2, fast skeletal type","termid":"PBO:0077705"}


id: PBO:0026790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caspofungin","termid":"PBO:0026790"}


id: GO:0015990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons against an electrochemical gradient, using energy from electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"electron transport coupled proton transport","termid":"GO:0015990"}


id: PBO:0040086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase F pseudogene 1","termid":"PBO:0040086"}


id: PBO:0070323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 12","termid":"PBO:0070323"}


id: PBO:0060916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 3","termid":"PBO:0060916"}


id: GO:0051232
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103231],"is_not":false,"summary":null,"term":"GO:0051232"}]},"cv_name":"biological_process","definition":"The lengthening of the distance between poles of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle elongation","termid":"GO:0051231"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"meiotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle elongation during meiosis","type":"exact"}],"termid":"GO:0051232","terms_by_termid":{"GO:0051232":null}}


id: GO:0102789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cyanidin = H+ + cyanidin 5-O-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-D-glucose:cyanidin 5-O-beta-D-glucosyltransferase activity (obsolete GO:0102789)","termid":"GO:0102789"}


id: PBO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A7","termid":"PBO:0050479"}


id: PBO:0036011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_vegetative_growth","termid":"PBO:0036011"}


id: PBO:0068631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 11, pseudogene","termid":"PBO:0068631"}


id: GO:2000812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0007010","GO:0008150","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"regulation of barbed-end actin filament capping","synonyms":[{"name":"regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"regulation of barbed-end actin capping activity","type":"exact"},{"name":"regulation of plus-end F-actin capping activity","type":"exact"},{"name":"regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000812"}


id: GO:0000407
data:
  {"annotated_genes":["SJAG_02441","SJAG_04991","SJAG_01274","SJAG_01561","SJAG_03851","SJAG_04219","SJAG_05017","SJAG_02414","SJAG_00724","SJAG_01135","SJAG_04963","SJAG_01876","SJAG_03100","SJAG_01382","SJAG_01783","SJAG_00763","SJAG_00004","SJAG_00059","SJAG_02699","SJAG_02640","SJAG_00645","SJAG_00115","SJAG_00114","SJAG_01251","SJAG_03136","SJAG_01283","SJAG_04502","SJAG_04655","SJAG_04232","SJAG_02852","SJAG_06309","SJAG_04860"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66773,73236,74247,74796,76279,80544,91386,101181,115484],"is_not":false,"summary":null,"term":"GO:0000407"},{"annotations":[96397],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097632"},{"annotations":[117000,94398,117061,81556,61336,113349,94682,81410,66630,81381,101483,81300,73760,61166,63165,73503,74372,75075,60292,96594,112099,113521],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034045"}]},"cv_name":"cellular_component","definition":"Punctate structures proximal to the endoplasmic reticulum which are the sites where the Atg machinery assembles upon autophagy induction.","definition_xrefs":["PMID:11689437","PMID:12048214","GOC:elh","PMID:12554655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00059":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00645":null,"SJAG_00724":null,"SJAG_00763":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phagophore assembly site","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"PAS","type":"exact"},{"name":"perivacuolar space","type":"narrow"},{"name":"pre-autophagosomal structure","type":"narrow"}],"termid":"GO:0000407","terms_by_termid":{"GO:0000407":null,"GO:0034045":null,"GO:0097632":null}}


id: GO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid phytoalexin metabolic process","synonyms":[{"name":"flavonoid phytoalexin metabolism","type":"exact"}],"termid":"GO:0046285"}


id: GO:1901398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta3 activation (obsolete GO:1901398)","synonyms":[{"name":"regulation of TGF-beta 3 activation","type":"exact"},{"name":"regulation of TGFB3 activation","type":"exact"},{"name":"regulation of TGFbeta 3 activation","type":"exact"}],"termid":"GO:1901398"}


id: MONDO:0017316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-deafness-neutrophil dysfunction-dysmorphism syndrome is characterized by short stature, sensorineural deafness, mutism, facial dysmorphism and abnormal neutrophil chemotaxis (leading to recurrent infections).","definition_xrefs":["Orphanet:2866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-deafness-neutrophil dysfunction-dysmorphism syndrome","secondary_identifiers":["SCTID:716192009","GARD:4841","UMLS:C4274785","MEDGEN:906653"],"synonyms":[{"name":"short stature deafness neutrophil dysfunction","type":"related"},{"name":"thong Douglas Ferrante syndrome","type":"related"},{"name":"thong-Douglas-Ferrante syndrome","type":"exact"}],"termid":"MONDO:0017316","xrefs":{"Monarch":{"xref_id":"0017316"}}}


id: PBO:0071969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B2","termid":"PBO:0071969"}


id: GO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response.","definition_xrefs":["GOC:add","PMID:15771571","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"immune response-regulating cell surface receptor signaling pathway","synonyms":[{"name":"immune response-regulating cell surface receptor signalling pathway","type":"exact"}],"termid":"GO:0002768"}


id: GO:1902112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diethyl maleate stimulus.","definition_xrefs":["PMID:12100563","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to diethyl maleate","termid":"GO:1902111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diethyl maleate","termid":"GO:1902112"}


id: RO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of surrounded by","direct_ancestors":[{"relation_name":"is_a","term_name":"adjacent_to","termid":"RO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surrounds","termid":"RO:0002221"}


id: PBO:0109473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_residue","termid":"PBO:0109473"}


id: GO:1903166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polycyclic arene stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:10998501","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to polycyclic arene","termid":"GO:1903165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to polycyclic arene","termid":"GO:1903166"}


id: FYECO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which formaldehyde was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ formaldehyde","termid":"FYECO:0000362"}


id: GO:0060574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell of the intestine to attain its fully functional state. A columnar/cuboidal epithelial cell of the intestine mature as they migrate from the intestinal crypt to the villus.","definition_xrefs":["PMID:18824147","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"},{"relation_name":"part_of","term_name":"intestinal epithelial cell development","termid":"GO:0060576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell maturation","termid":"GO:0060574"}


id: PBO:0059377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 2","termid":"PBO:0059377"}


id: MONDO:0700303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A palsy characterized by a paralysis of the arm caused by an injury to the upper group of the main nerves supplying it, specifically the upper trunk C5-C6 of the brachial plexus. Erb palsy most commonly, though not exclusively, arises as a result of an injury sustained during birth.","definition_xrefs":["PMID:30020632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachial plexus neuropathy from injury","termid":"MONDO:0004569"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Erb palsy","synonyms":[{"name":"Erb-Duchenne paralysis","type":"exact"}],"termid":"MONDO:0700303","xrefs":{"Monarch":{"xref_id":"0700303"}}}


id: PBO:0087755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; transposon insertion mutant is salt sensitive and null mutant has growth defects; non-tagged protein is detected in purified mitochondria","termid":"PBO:0087755"}


id: PBO:0049128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPRC5D and HEBP1 antisense RNA 1","termid":"PBO:0049128"}


id: PBO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-tRNA ligase (predicted)","termid":"PBO:0001177"}


id: PBO:0066117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 11 member A","termid":"PBO:0066117"}


id: PBO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6 pseudogene","termid":"PBO:0062158"}


id: GO:0051278
data:
  {"annotated_genes":["SJAG_01453","SJAG_04184","SJAG_05285","SJAG_04666","SJAG_01290","SJAG_03587","SJAG_00610","SJAG_00876","SJAG_04236","SJAG_03057","SJAG_02278","SJAG_02916","SJAG_01028","SJAG_01835","SJAG_04483","SJAG_00218","SJAG_02222","SJAG_01288","SJAG_03123","SJAG_00424","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[80466,72312,75209,73099,75037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[74684,77546,93372,117660,72740,115001,76200,107912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104439,79915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[94193,89279],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[96720,94199,91212,104646],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the polysaccharides which make up the fungal-type cell wall.","definition_xrefs":["GOC:mtg_sensu","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide metabolic process","termid":"GO:0071966"},{"relation_name":"part_of","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"fungal-type cell wall polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall polysaccharide anabolism","type":"broad"},{"name":"cell wall polysaccharide formation","type":"broad"},{"name":"cell wall polysaccharide synthesis","type":"broad"},{"name":"chitin- and beta-glucan-containing cell wall polysaccharide biosynthetic process","type":"narrow"}],"termid":"GO:0051278","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0069598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 875, pseudogene","termid":"PBO:0069598"}


id: PBO:0058925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7d","termid":"PBO:0058925"}


id: PBO:0081044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing 1","termid":"PBO:0081044"}


id: PBO:0058069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4288","termid":"PBO:0058069"}


id: PBO:0073596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sedoheptulokinase","termid":"PBO:0073596"}


id: PBO:0090099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Stx8","termid":"PBO:0090099"}


id: PBO:0039511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B","termid":"PBO:0039511"}


id: GO:1900470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:8056324","PMID:8614637","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"activation of phosphatidylserine anabolism","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylserine formation","type":"exact"},{"name":"activation of phosphatidylserine synthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine formation","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylserine formation","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylserine formation","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylserine formation","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900470"}


id: PBO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentrin Pcp1","termid":"PBO:0001968"}


id: PBO:0113466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the signal peptidase complex (SPC); SPC cleaves the signal sequence from proteins targeted to the endoplasmic reticulum (ER); regulates cellular levels of membrane proteins; homolog of the SPC12 subunit of mammalian signal peptidase complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0113466"}


id: PBO:0041632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 2","termid":"PBO:0041632"}


id: GO:0061848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholecystokinin stimulus.","definition_xrefs":["PMID:14622258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cholecystokinin","termid":"GO:0061847"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cholecystokinin","termid":"GO:0061848"}


id: PBO:0055216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2642","termid":"PBO:0055216"}


id: MONDO:0021580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the jaw skeleton.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of jaw","secondary_identifiers":["SCTID:126634001","MEDGEN:43991","ICD9:239.89","UMLS:C0022364"],"synonyms":[{"name":"jaw skeleton neoplasm","type":"exact"},{"name":"jaw skeleton neoplasm (disease)","type":"exact"},{"name":"jaw skeleton tumor","type":"exact"},{"name":"jaw skeleton tumour","type":"exact"},{"name":"neoplasm of jaw skeleton","type":"exact"},{"name":"tumor of jaw skeleton","type":"exact"},{"name":"tumour of jaw skeleton","type":"exact"}],"termid":"MONDO:0021580","xrefs":{"Monarch":{"xref_id":"0021580"}}}


id: PBO:0055948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 57","termid":"PBO:0055948"}


id: MONDO:1010740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Common variable immunodeficiency that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common variable immunodeficiency, non-human animal","termid":"MONDO:1010123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"common variable immunodeficiency, horse","secondary_identifiers":["OMIA:001760-9796"],"termid":"MONDO:1010740","xrefs":{"Monarch":{"xref_id":"1010740"}}}


id: MONDO:0009221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Femur-fibula-ulna (FFU) complex is a non-lethal congenital anomaly of unknown etiology, more frequently reported in males than females, characterized by a highly variable combination of defects of the femur, fibula, and/or ulna, with striking asymmetry, including absence of the proximal part of the femur, absence of the fibula and malformation of the ulnar side of the upper limb. Axial skeleton, internal organs and intellectual function are usually normal.","definition_xrefs":["Orphanet:2019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"femur-fibula-ulna complex","secondary_identifiers":["MEDGEN:347305","UMLS:C1856790","icd11.foundation:353892894","GARD:2286","MedDRA:10068448","MESH:C537918","OMIM:228200"],"synonyms":[{"name":"FFU complex","type":"exact"},{"name":"Ffu syndrome","type":"related"},{"name":"PFFD","type":"exact"},{"name":"femur fibula ulna syndrome","type":"related"},{"name":"femur-fibula-ulna dysostosis","type":"exact"},{"name":"femur-fibula-ulna syndrome","type":"exact"}],"termid":"MONDO:0009221","xrefs":{"Monarch":{"xref_id":"0009221"}}}


id: PBO:0003741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp5","termid":"PBO:0003741"}


id: MOD:00238
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-lysine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 5'-(N6-L-lysine)-L-topaquinone.","definition_xrefs":["PubMed:8688089","RESID:AA0233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-(N6-L-lysine)-L-topaquinone","synonyms":[{"name":"1-[(S)-5-amino-5-carboxypentyl]amino-2-[(S)-2-amino-2-carboxyethyl]-2,6-cyclohexadien-4,5-dione","type":"exact"},{"name":"2'-(L-lys-N6-yl)-L-4',5'-topaquinone","type":"exact"},{"name":"2'-(L-lysine)-L-tyrosyl-4',5'-quinone","type":"exact"},{"name":"CROSSLNK Lysine tyrosylquinone (Lys-Tyr)","type":"exact"},{"name":"CROSSLNK Lysine tyrosylquinone (Tyr-Lys)","type":"exact"},{"name":"LTQ","type":"exact"},{"name":"lysyl oxidase cofactor","type":"exact"}],"termid":"MOD:00238"}


id: PBO:0047594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGR proto-oncogene, Src family tyrosine kinase","termid":"PBO:0047594"}


id: PBO:0055309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2736","termid":"PBO:0055309"}


id: GO:1901354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-canavanine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-canavanine","termid":"GO:1901354"}


id: GO:1905945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to calcium ion.","definition_xrefs":["GOC:aruk","GOC:TermGenie","GO_REF:0000058","PMID:11404397","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to calcium ion","termid":"GO:0051592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to calcium ion","synonyms":[{"name":"regulation of response to Ca2+ ion","type":"exact"}],"termid":"GO:1905945"}


id: MONDO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myopathy (obsolete MONDO:0000864)","termid":"MONDO:0000864","xrefs":{"Monarch":{"xref_id":"0000864"}}}


id: PBO:0053649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 701","termid":"PBO:0053649"}


id: PBO:0080813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 3","termid":"PBO:0080813"}


id: GO:0062229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of larval somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somatic muscle development","termid":"GO:0062223"},{"relation_name":"regulates","term_name":"larval somatic muscle development","termid":"GO:0007526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of larval somatic muscle development","termid":"GO:0062229"}


id: GO:0098031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small disk located at the base of some icosahedral virus capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, collar","termid":"GO:0098031"}


id: GO:0035483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["ISBN:9781416032458","GOC:cy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric motility","termid":"GO:0035482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric emptying","termid":"GO:0035483"}


id: GO:0042816
data:
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id: _global:imports
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id: SO:0001259
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id: PBO:0049986
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id: GO:0018508
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id: MONDO:0020192
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id: GO:0010605
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id: GO:0051745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the conversion of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H+ + 2 reduced [2Fe-2S]-[ferredoxin] to isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) releasing H2O + 2 oxidized [2Fe-2S]-[ferredoxin]. Note that (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate is an alternative name for 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.","definition_xrefs":["EC:1.17.7.4","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity","secondary_identifiers":["KEGG_REACTION:R05884","MetaCyc:ISPH2-RXN"],"synonyms":[{"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity","type":"exact"},{"name":"isopentenyl-diphosphate:NAD(P)+ oxidoreductase activity","type":"exact"}],"termid":"GO:0051745"}


id: PR:O13842
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cda1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin deacetylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.03","synonyms":[{"name":"Spom972h-cda1","type":"exact"}],"termid":"PR:O13842"}


id: SO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Endogenous DNA sequence that are likely to have arisen from retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"proviral_location","termid":"SO:0000751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous_retroviral_sequence","synonyms":[{"name":"endogenous retroviral sequence","type":"exact"}],"termid":"SO:0000903"}


id: MONDO:0006467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing primary carcinoma of the thyroid gland composed of malignant squamous cells. The clinical course is usually aggressive.","definition_xrefs":["NCIT:C46008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland squamous cell carcinoma","secondary_identifiers":["EFO:1000594","UMLS:C1710177","MEDGEN:328050"],"synonyms":[{"name":"squamous cell thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006467","xrefs":{"Monarch":{"xref_id":"0006467"}}}


id: GO:0030053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any member of a family of receptors that includes the major FK506 binding protein FKBP and cyclophilin. These two proteins are unrelated in amino-acid sequence, but both possess peptidyl-prolyl isomerase activity which is blocked by immunosuppressants that block signal-transduction pathways leading to T cell activation such as FK506 and rapamycin, which block FKBP, or cyclosporin A, which blocks cyclophilin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete immunophilin (obsolete GO:0030053)","synonyms":[{"name":"immunophilin","type":"exact"}],"termid":"GO:0030053"}


id: FYPO:0002634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cobalt ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to cobalt","synonyms":[{"name":"resistance to cobalt during mitotic cell cycle","type":"related"},{"name":"resistance to cobalt during vegetative growth","type":"exact"},{"name":"resistance to cobalt ion","type":"exact"},{"name":"resistance to cobalt ions","type":"exact"},{"name":"resistant to cobalt","type":"exact"}],"termid":"FYPO:0002634"}


id: GO:0010130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethylbenzene, a benzene derivative with an ethyl group attached to the ring, which occurs in the absence of oxygen.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylbenzene catabolic process","termid":"GO:0018915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic ethylbenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:ethb","MetaCyc:PWY-481"],"synonyms":[{"name":"anaerobic ethylbenzene breakdown","type":"exact"},{"name":"anaerobic ethylbenzene catabolism","type":"exact"},{"name":"anaerobic ethylbenzene degradation","type":"exact"}],"termid":"GO:0010130"}


id: SO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in a genome which promotes recombination.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_hotspot","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_hotspot"],"synonyms":[{"name":"recombination hotspot","type":"exact"}],"termid":"SO:0000339"}


id: PBO:0072832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP18 pseudogene 2","termid":"PBO:0072832"}


id: PBO:0075914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 6","termid":"PBO:0075914"}


id: FYPO:0006637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is decreased, and an increased amount of the protein is instead detected distributed throughout the cell cortex.","definition_xrefs":["PomBase:mah","PMID:29930085"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"},{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"decreased protein localization to cell tip, with protein distributed in plasma membrane or cortex","termid":"FYPO:0003208"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0005798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex","synonyms":[{"name":"decreased protein localisation to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell end, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to of cell tip cortex, with protein distributed in cortex","type":"exact"},{"name":"reduced protein localization to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006637"}


id: PBO:0079568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B","termid":"PBO:0079568"}


id: GO:0060853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the commitment of a cell to an arterial endothelial cell fate.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"arterial endothelial cell fate commitment","termid":"GO:0060844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway involved in arterial endothelial cell fate commitment","synonyms":[{"name":"Notch signalling pathway involved in arterial endothelial cell fate commitment","type":"exact"}],"termid":"GO:0060853"}


id: PBO:0074510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A2","termid":"PBO:0074510"}


id: GO:0007341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["PMID:21755679","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-multicellular organism process","termid":"GO:0044706"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of zona pellucida","termid":"GO:0007341"}


id: PBO:0078808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 25-1","termid":"PBO:0078808"}


id: MONDO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 77","secondary_identifiers":["OMIM:619988","UMLS:C5774193","DOID:0081236","MEDGEN:1823966"],"synonyms":[{"name":"MRT77","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 77","type":"exact"}],"termid":"MONDO:0031031","xrefs":{"Monarch":{"xref_id":"0031031"}}}


id: PBO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035765"}


id: MONDO:0007852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Palmoplantar keratoderma-deafness syndrome is a keratinization disorder characterized by focal or diffuse palmoplantar keratoderma. A patchy distribution is observed with accentuation on the thenars, hypothenars and the arches of the feet. The disease becomes apparent in infancy and is associated with sensorineural hearing loss that shows a variable age of onset. Due to genetic and clinical similarities, it has been proposed that palmoplantar keratoderma-deafness syndrome, knuckle pads-leukonychia-sensorineural deafness-palmoplantar hyperkeratosis syndrome and keratoderma hereditarium mutilans may represent variants of one broad disorder of syndromic deafness with heterogeneous phenotype. The disease is transmitted in an autosomal dominant manner with incomplete penetrance.","definition_xrefs":["Orphanet:2202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-deafness syndrome","secondary_identifiers":["MEDGEN:332030","MESH:C536152","OMIM:148350","UMLS:C1835672","DOID:0111505","GARD:3094"],"synonyms":[{"name":"PPK-deafness syndrome","type":"exact"},{"name":"diffuse palmoplantar keratoderma with deafness (subtype)","type":"related"},{"name":"focal palmoplantar keratoderma with sensorineural deafness (subtype)","type":"related"},{"name":"hereditary palmoplantar keratoderma with deafness (subtype)","type":"related"},{"name":"keratoderma palmoplantar deafness","type":"related"},{"name":"keratoderma palmoplantar, with deafness","type":"related"},{"name":"keratoderma, palmoplantar, with deafness","type":"related"},{"name":"palmoplantar hyperkeratosis-deafness syndrome","type":"exact"},{"name":"palmoplantar hyperkeratosis-hearing loss syndrome","type":"exact"},{"name":"palmoplantar keratoderma and sensorineural deafness","type":"related"},{"name":"palmoplantar keratoderma-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0007852","xrefs":{"Monarch":{"xref_id":"0007852"}}}


id: GO:0050522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which phosphorus or arsenic acts as a hydrogen or electron donor and reduces a known acceptor other than disulfide, NAD or NADP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on phosphorus or arsenic in donors, with other known acceptors (obsolete GO:0050522)","termid":"GO:0050522"}


id: PBO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A beta","termid":"PBO:0002337"}


id: PR:O74351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine desulfurase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11601:SF13","OMA:SCHPO03272","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine desulfurase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.11c","secondary_identifiers":["UniProtKB:O74351"],"synonyms":[{"name":"Spom972h-NFS1","type":"exact"}],"termid":"PR:O74351"}


id: PBO:0045527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTW domain containing 2","termid":"PBO:0045527"}


id: CHEBI:64090
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tert-butyl hydroperoxide","termid":"CHEBI:64090"}


id: GO:0048835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that reduces the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete specification of decreased petal number (obsolete GO:0048835)","termid":"GO:0048835"}


id: FYPO:0002165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide 3'-phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"}


id: PBO:0064085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein alpha","termid":"PBO:0064085"}


id: GO:0031504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the peptidoglycan-based cell wall.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"peptidoglycan-based cell wall organization","synonyms":[{"name":"peptidoglycan-based cell wall organisation","type":"exact"},{"name":"peptidoglycan-based cell wall organization and biogenesis","type":"related"}],"termid":"GO:0031504"}


id: PBO:0087273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3C histone deacetylase scaffold; can act as prion [ESI+] (Expressed Subtelomeric Information) that drives emergence and transgenerational inheritance of activated chromatin state; prion conformer is triggered by transient Snt1p phosphorylation upon cell cycle arrest; [ESI+] reshapes the activity Set3C, recruiting RNAPII, interfering with Rap1p binding to activate genes in otherwise repressed subtelomeric domains; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087273"}


id: GO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced coenzyme F420-(gamma-L-Glu)(n) + O2 = 2 oxidized coenzyme F420-(gamma-L-Glu)(n) + 2 H2O + 2 H+.","definition_xrefs":["RHEA:39711","PMID:15340796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"coenzyme F420H2 oxidase activity","secondary_identifiers":["EC:1.5.3.22"],"synonyms":[{"name":"F420H2 oxidase activity","type":"exact"},{"name":"F420H2:oxygen oxidoreductase activity","type":"exact"},{"name":"reduced coenzyme F420 oxidase activity","type":"exact"}],"termid":"GO:0052765"}


id: FYPO:0007724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ERMES foci in a cell are normal (i.e. indistinguishable from wild type) in number, size, and distribution. An ERMES focus is a site that contains one or more ERMES complex(es).","definition_xrefs":["PMID:33483504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal ERMES foci","synonyms":[{"name":"normal ERMES foci during mitotic cell cycle","type":"related"},{"name":"normal ERMES foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007724"}


id: PBO:0080651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 G2 checkpoint kinase","termid":"PBO:0080651"}


id: GO:1902776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-sulfoquinovose(1-).","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:24463506","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) metabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) metabolism","type":"exact"}],"termid":"GO:1902776"}


id: MONDO:0030298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 8","secondary_identifiers":["MEDGEN:1780930","OMIM:619367","UMLS:C5543528"],"synonyms":[{"name":"HAE8","type":"exact"},{"name":"angioedema, hereditary, 8","type":"exact"}],"termid":"MONDO:0030298","xrefs":{"Monarch":{"xref_id":"0030298"}}}


id: PBO:0003602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, ribosomal subunit L35 (predicted)","termid":"PBO:0003602"}


id: MOD:00097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine amide.","definition_xrefs":["PubMed:13591312","RESID:AA0088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine amide","synonyms":[{"name":"2-aminoacetamide","type":"exact"},{"name":"2-aminoethanamide","type":"exact"},{"name":"2-azanylethanamide","type":"exact"},{"name":"GlyN","type":"exact"},{"name":"MOD_RES Glycine amide","type":"exact"},{"name":"amidated glycine","type":"exact"},{"name":"glycinamide","type":"exact"},{"name":"glycine amide","type":"exact"}],"termid":"MOD:00097"}


id: PR:O59761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13930:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.08","secondary_identifiers":["UniProtKB:O59761"],"synonyms":[{"name":"SPCC1020.08","type":"related"},{"name":"Spom972h-TYW1","type":"exact"},{"name":"tRNA wybutosine-synthesizing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59761"}


id: PBO:0080938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel","termid":"PBO:0080938"}


id: PBO:0113480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane (PM) protein; C-terminal palmitoylation is required for membrane anchoring and protein stability; PM localization is polarized to the daughter cell; contains a conserved cysteine rich palmitoylated domain (CYSPD, aka CYSTM); related proteins in other organisms may be involved in response to stress","termid":"PBO:0113480"}


id: GO:1905050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:26473732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metallopeptidase activity","synonyms":[{"name":"activation of metallopeptidase activity","type":"narrow"},{"name":"activation of metalloprotease activity","type":"narrow"},{"name":"activation of metalloproteinase activity","type":"narrow"},{"name":"positive regulation of metalloprotease activity","type":"narrow"},{"name":"positive regulation of metalloproteinase activity","type":"narrow"},{"name":"up regulation of metallopeptidase activity","type":"exact"},{"name":"up regulation of metalloprotease activity","type":"narrow"},{"name":"up regulation of metalloproteinase activity","type":"narrow"},{"name":"up-regulation of metallopeptidase activity","type":"exact"},{"name":"up-regulation of metalloprotease activity","type":"narrow"},{"name":"up-regulation of metalloproteinase activity","type":"narrow"},{"name":"upregulation of metallopeptidase activity","type":"exact"},{"name":"upregulation of metalloprotease activity","type":"narrow"},{"name":"upregulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905050"}


id: PBO:0003486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic ring-opening dioxygenase (predicted)","termid":"PBO:0003486"}


id: PBO:0076038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 35","termid":"PBO:0076038"}


id: PBO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_movement_within_plasma_membrane_at_cell_tip","termid":"PBO:0035860"}


id: PBO:0084893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator specific for the COX3 mRNA; acts together with Pet54p and Pet122p; located in the mitochondrial inner membrane","termid":"PBO:0084893"}


id: PR:Q9UT42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb6 gene.","definition_xrefs":["UniProtKB:Q9UT42","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase lsb6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.19","synonyms":[{"name":"PI4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsb6","type":"exact"}],"termid":"PR:Q9UT42"}


id: GO:0035634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to a stilbenoid. Stilbenoids are secondary products of heartwood formation in trees that can act as phytoalexins. Stilbenoids are hydroxylated derivatives of stilbene. They belong to the family of phenylpropanoids and share most of their biosynthesis pathway with chalcones.","definition_xrefs":["Wikipedia:Stilbenoid","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stilbenoid","termid":"GO:0035634"}


id: GO:0006669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphinganine-1-phosphate biosynthetic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate biosynthesis","type":"exact"},{"name":"dihydrosphingosine-1-phosphate biosynthetic process","type":"exact"},{"name":"sphinganine-1-phosphate anabolism","type":"exact"},{"name":"sphinganine-1-phosphate biosynthesis","type":"exact"},{"name":"sphinganine-1-phosphate formation","type":"exact"},{"name":"sphinganine-1-phosphate synthesis","type":"exact"}],"termid":"GO:0006669"}


id: PBO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.3","termid":"PBO:0003275"}


id: GO:0047383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-guanidino-1-deoxy-scyllo-inositol 4-phosphate + H2O = 1-guanidino-1-deoxy-scyllo-inositol + phosphate.","definition_xrefs":["RHEA:15777","EC:3.1.3.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"guanidinodeoxy-scyllo-inositol-4-phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.40-RXN","KEGG_REACTION:R03496"],"synonyms":[{"name":"1-guanidino-1-deoxy-scyllo-inositol-4-P phosphohydrolase activity","type":"related"},{"name":"1-guanidino-1-deoxy-scyllo-inositol-4-phosphate 4-phosphohydrolase activity","type":"related"},{"name":"1-guanidino-scyllo-inositol 4-phosphatase activity","type":"related"}],"termid":"GO:0047383"}


id: PBO:0051854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1","termid":"PBO:0051854"}


id: PBO:0081579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 506","termid":"PBO:0081579"}


id: PBO:0085594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern","termid":"PBO:0085594"}


id: FYPO:0005618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of repair of double-strand breaks formed as part of meiotic recombination is longer than normal.","definition_xrefs":["PMID:18378696","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of meiotic recombination double-strand break repair","synonyms":[{"name":"increased duration of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair during meiotic recombination","type":"exact"},{"name":"increased duration of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"prolonged meiotic recombination double-strand break repair","type":"exact"}],"termid":"FYPO:0005618"}


id: PBO:0059404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 1","termid":"PBO:0059404"}


id: MONDO:0958335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1d","secondary_identifiers":["OMIM:620780","UMLS:C5935602","MEDGEN:1857168"],"termid":"MONDO:0958335","xrefs":{"Monarch":{"xref_id":"0958335"}}}


id: PR:000037486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA","UniProtKB:P04551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal-type cyclin-dependent kinase 1","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cell division control protein 2","type":"exact"},{"name":"Cell division protein kinase 1","type":"exact"},{"name":"cdc2","type":"exact"},{"name":"p34 protein kinase","type":"exact"}],"termid":"PR:000037486"}


id: MONDO:0011867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia with cyst, bilateral facial clefts, and limb anomalies","secondary_identifiers":["MEDGEN:375210","UMLS:C1843492","MESH:C564370","OMIM:607597"],"synonyms":[{"name":"microphthalmia with cyst, bilateral facial clefts, and limb anomalies","type":"exact"}],"termid":"MONDO:0011867","xrefs":{"Monarch":{"xref_id":"0011867"}}}


id: MONDO:0019223
data:
  {"annotated_genes":["SJAG_02769","SJAG_04499","SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[88783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008760"},{"annotations":[88291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009492"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of energy metabolism","termid":"MONDO:0019243"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02769":null,"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of fatty acid and ketone body metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79174","UMLS:C5681281","GARD:18954","MEDGEN:1842462"],"synonyms":[{"name":"disorder of fatty acid oxidation and ketone body metabolism","type":"related"},{"name":"inborn disorder of fatty acid oxidation and ketone body metabolism","type":"exact"}],"termid":"MONDO:0019223","terms_by_termid":{"MONDO:0008760":null,"MONDO:0009492":null,"MONDO:0011614":null},"xrefs":{"Monarch":{"xref_id":"0019223"}}}


id: GO:0140980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleosides within a cell.","definition_xrefs":["PMID:23416111","PMID:34880500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleoside homeostasis","termid":"GO:0140980"}


id: PBO:0047304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FARSA antisense RNA 1","termid":"PBO:0047304"}


id: PBO:0058493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5688","termid":"PBO:0058493"}


id: PBO:0086503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative precursor of the subtilisin-like protease III; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YSP3 has a paralog, PRB1, that arose from the whole genome duplication","termid":"PBO:0086503"}


id: MOD:00759
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"fucosylated biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Fucosylated biantennary (-1 galactose)","type":"related"},{"name":"dHex(1)Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00759"}


id: MONDO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually solitary polypoid lesion that arises from the cervix. It usually affects women in their reproductive years. It is characterized by the presence of a connective tissue core and overlying epithelium.","definition_xrefs":["NCIT:C40200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical polyp","termid":"MONDO:0000751"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical fibroepithelial polyp","secondary_identifiers":["UMLS:C1516413","MEDGEN:308945"],"synonyms":[{"name":"Cervical fibroepithelial polyp","type":"exact"},{"name":"uterine cervix fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060777","xrefs":{"Monarch":{"xref_id":"0060777"}}}


id: GO:0080100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-glutamine + 2-oxoglutarate = 2-oxoglutaramate + L-glutamate.","definition_xrefs":["PMID:18394996"],"gene_count":0,"genotype_count":0,"name":"obsolete L-glutamine:2-oxoglutarate aminotransferase activity (obsolete GO:0080100)","synonyms":[{"name":"L-glutamine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080100"}


id: GO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine catabolic process","synonyms":[{"name":"nor-spermidine breakdown","type":"exact"},{"name":"nor-spermidine catabolism","type":"exact"},{"name":"nor-spermidine degradation","type":"exact"}],"termid":"GO:0046205"}


id: PBO:0078870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 4","termid":"PBO:0078870"}


id: PBO:0013478
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cut Eight supressing Kinase","termid":"PBO:0013478"}


id: GO:0010942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell death (obsolete GO:0010942)","termid":"GO:0010942"}


id: GO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cytokinin and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"cytokinin receptor activity","termid":"GO:0009884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled cytokinin receptor activity","synonyms":[{"name":"G protein coupled cytokinin receptor activity","type":"exact"},{"name":"G-protein coupled cytokinin receptor activity","type":"exact"},{"name":"cytokinin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0001647"}


id: GO:0036518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dopaminergic neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["PMID:23517308","GOC:PARL","PMID:21106844","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemorepulsion of axon","termid":"GO:0061643"},{"relation_name":"part_of","term_name":"dopaminergic neuron axon guidance","termid":"GO:0036514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of dopaminergic neuron axon","synonyms":[{"name":"chemorepulsion of DA axon","type":"exact"},{"name":"chemorepulsion of dopaminergic axon","type":"related"}],"termid":"GO:0036518"}


id: GO:0021852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a pyramidal neuron precursor from the ventricular zone to the correct layer of the cerebral cortex.","definition_xrefs":["GO_REF:0000021","PMID:22192824","GOC:jid","GOC:dph","GOC:dgh","GOC:cls","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"},{"relation_name":"is_a","term_name":"radial glia-guided pyramidal neuron migration","termid":"GO:0140650"},{"relation_name":"part_of","term_name":"pyramidal neuron development","termid":"GO:0021860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramidal neuron migration to cerebral cortex","synonyms":[{"name":"projection neuron migration","type":"related"},{"name":"pyramidal neuron migration","type":"broad"}],"termid":"GO:0021852"}


id: MONDO:0042983
data:
  {"annotated_genes":["SJAG_03453","SJAG_04213","SJAG_01111","SJAG_05346","SJAG_00991","SJAG_00289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[89080,89079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"},{"annotations":[88896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008612"},{"annotations":[88205,88204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013199"}]},"cv_name":"mondo","definition":"A group of disorders characterized by ectodermal-based malformations and neoplastic growths in the skin, nervous system, and other organs.","definition_xrefs":["MESH:D020752"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_03453":null,"SJAG_04213":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"neurocutaneous syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0265316","MEDGEN:82706","NANDO:2100220","SCTID:78572006","NCIT:C84348"],"synonyms":[{"name":"Phacomatoses","type":"related"},{"name":"Phacomatosis","type":"related"},{"name":"Phakomatoses","type":"related"},{"name":"neurocutaneous disorder","type":"related"},{"name":"neurocutaneous disorders","type":"related"},{"name":"neurocutaneous syndrome","type":"exact"},{"name":"neuroectodermal dysplasia","type":"related"},{"name":"neuroectodermal dysplasia syndrome","type":"related"},{"name":"neuroectodermal dysplasia syndromes","type":"related"},{"name":"phakomatosis","type":"related"},{"name":"syndrome, neurocutaneous","type":"related"},{"name":"syndrome, neuroectodermal dysplasia","type":"related"},{"name":"syndromes, neurocutaneous","type":"related"},{"name":"syndromes, neuroectodermal dysplasia","type":"related"}],"termid":"MONDO:0042983","terms_by_termid":{"MONDO:0008612":null,"MONDO:0009578":null,"MONDO:0013199":null,"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0042983"}}}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:bc","PMID:22683681","GOC:jl","ISBN:0198506732","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: GO:0060572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet by localized folding.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial bud","termid":"GO:0060572"}


id: PBO:0089309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase GH125 family Mug157","termid":"PBO:0089309"}


id: PBO:0053131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactase like","termid":"PBO:0053131"}


id: FYPO:0003560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is abnormal. Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["GO:0051300","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal spindle pole body organization","synonyms":[{"name":"abnormal SPB organization","type":"exact"},{"name":"abnormal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0003560"}


id: GO:1901809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of capsanthin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:10995282","UniPathway:UPA00806","MetaCyc:PWY-5174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"capsanthin metabolic process","termid":"GO:1901807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"capsanthin biosynthetic process","synonyms":[{"name":"capsanthin anabolism","type":"exact"},{"name":"capsanthin biosynthesis","type":"exact"},{"name":"capsanthin formation","type":"exact"},{"name":"capsanthin synthesis","type":"exact"}],"termid":"GO:1901809"}


id: PBO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster biogenesis protein Iba57 (predicted)","termid":"PBO:0016964"}


id: GO:0036044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein amino acid by the addition of a malonyl (CO-CH2-CO) group.","definition_xrefs":["GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete protein malonylation (obsolete GO:0036044)","synonyms":[{"name":"protein malonylation","type":"exact"}],"termid":"GO:0036044"}


id: GO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a peptidyl-cystine residue in a protein by the transfer of a sulfur atom from a free cysteine (in the process converting the free cysteine to alanine) to the peptidyl-cysteine to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of peptidyl-cystine persulfide by sulphur transfer from free cysteine (obsolete GO:0044526)","termid":"GO:0044526"}


id: MONDO:0005637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adult-onset Still disease (obsolete MONDO:0005637)","synonyms":[{"name":"obsolete adult-onset Still's disease","type":"exact"}],"termid":"MONDO:0005637","xrefs":{"Monarch":{"xref_id":"0005637"}}}


id: MONDO:0013768
data:
  {"annotated_genes":["SJAG_05213","SJAG_01344","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88398,88399,88400],"is_not":false,"summary":null,"term":"MONDO:0013768"}]},"cv_name":"mondo","definition":"Any arterial calcification of infancy in which the cause of the disease is a mutation in the ABCC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"},{"relation_name":"is_a","term_name":"arterial calcification of infancy","termid":"MONDO:0018870"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"arterial calcification, generalized, of infancy, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:477791","OMIM:614473","UMLS:C3276161"],"synonyms":[{"name":"ABCC6 arterial calcification of infancy","type":"exact"},{"name":"GACI2","type":"related"},{"name":"arterial calcification of infancy caused by mutation in ABCC6","type":"exact"},{"name":"arterial calcification, generalized, of infancy, 2","type":"exact"},{"name":"arterial calcification, generalized, of infancy, type 2","type":"exact"}],"termid":"MONDO:0013768","terms_by_termid":{"MONDO:0013768":null},"xrefs":{"Monarch":{"xref_id":"0013768"}}}


id: PBO:0071585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 1","termid":"PBO:0071585"}


id: FYPO:0002273
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has abnormal morphology (i.e. size, shape, or structure) and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"},{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with abnormal cell morphology","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable cell with abnormal cell morphology during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with abnormal cell morphology during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with abnormal cell morphology","type":"exact"}],"termid":"FYPO:0002273","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MONDO:0015549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic hematologic disease (obsolete MONDO:0015549)","secondary_identifiers":["Orphanet:158300"],"termid":"MONDO:0015549","xrefs":{"Monarch":{"xref_id":"0015549"}}}


id: PBO:0040330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 5","termid":"PBO:0040330"}


id: GO:0098563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of synaptic vesicle membrane (obsolete GO:0098563)","termid":"GO:0098563"}


id: PBO:0030607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_calcium_starvation","termid":"PBO:0030607"}


id: GO:0044301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The axon of inferior olive neuron that projects to the cerebellar cortex, largely via the inferior cerebellar peduncle. They range in diameter from 1-3 um and are myelinated until they enter the granule cell layer. They give off collaterals to the deep cerebellar nuclei. They synapse extensively with the dendrites of Purkinje cells in the molecular layer, where each fiber branches repeatedly to climb along the Purkinje cell dendritic tree. Each Purkinje cell is innervated by only a single climbing fiber.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"climbing fiber","synonyms":[{"name":"climbing fibre","type":"exact"}],"termid":"GO:0044301"}


id: MONDO:0015974
data:
  {"annotated_genes":["SJAG_05024","SJAG_00677","SJAG_04199","SJAG_02038","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012650"},{"annotations":[88833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011686"},{"annotations":[87382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009973"},{"annotations":[87635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014168"},{"annotations":[88192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014391"}]},"cv_name":"mondo","definition":"Severe combined immunodeficiency (SCID) comprises a group of rare monogenic primary immunodeficiency disorders characterized by a lack of functional peripheral T lymphocytes resulting in early-onset severe respiratory infections and failure to thrive. They are classified according to immunological phenotype into SCID with absence of T cells but presence of B cells (T-B+ SCID) or SCID with absence of both (T-B- SCID). Both of these groups include several forms, with or without natural killer (NK) cells.","definition_xrefs":["Orphanet:183660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_02038":null,"SJAG_02527":null,"SJAG_04199":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:627","UMLS:C0085110","NORD:1706","SCTID:31323000","HP:0004430","MedDRA:10069566","GARD:7628","icd11.foundation:963193284","MESH:D016511","NCIT:C3472","MEDGEN:88328"],"synonyms":[{"name":"SCID","type":"exact"},{"name":"combined T and B cell inborn immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency","type":"exact"},{"name":"severe combined immunodeficiency (disease)","type":"exact"},{"name":"severe combined immunodeficiency disease","type":"exact"}],"termid":"MONDO:0015974","terms_by_termid":{"MONDO:0009973":null,"MONDO:0011686":null,"MONDO:0012650":null,"MONDO:0014168":null,"MONDO:0014391":null},"xrefs":{"Monarch":{"xref_id":"0015974"}}}


id: PBO:0068570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 21, pseudogene","termid":"PBO:0068570"}


id: PR:P28758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superoxide dismutase [Cu-Zn] that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00397","PANTHER:PTHR10003:SF11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase [Cu-Zn] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.10c","secondary_identifiers":["UniProtKB:P28758"],"synonyms":[{"name":"Spom972h-SOD1","type":"exact"}],"termid":"PR:P28758"}


id: PBO:0060533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 9 (putative)","termid":"PBO:0060533"}


id: GO:0050904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The passage of a leukocyte between the tight junctions of endothelial cells lining blood vessels, typically the fourth and final step of cellular extravasation.","definition_xrefs":["PMID:7507411","PMID:8600538","PMID:14680625","ISBN:0781735149","PMID:14708592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diapedesis","termid":"GO:0050904"}


id: PBO:0036002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation_during_vegetative_growth","termid":"PBO:0036002"}


id: MONDO:0006067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive morphologic variant of acinar adenocarcinoma of the prostate gland characterized by the presence of lakes of extracellular mucin. This diagnosis applies when at least 25% of the resected tumor contains extracellular mucin.","definition_xrefs":["NCIT:C5537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatic acinar adenocarcinoma","termid":"MONDO:0002493"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar prostate mucinous adenocarcinoma","secondary_identifiers":["DOID:3703","MEDGEN:277536","UMLS:C1335513","EFO:1000065"],"synonyms":[{"name":"acinar colloid prostate adenocarcinoma","type":"exact"},{"name":"colloid adenocarcinoma of prostate","type":"exact"},{"name":"colloid adenocarcinoma of the prostate","type":"exact"},{"name":"colloidal adenocarcinoma of prostate","type":"exact"},{"name":"colloidal adenocarcinoma of the prostate","type":"exact"},{"name":"colloidal prostate adenocarcinoma","type":"exact"},{"name":"mucinous adenocarcinoma of prostate","type":"exact"},{"name":"mucinous adenocarcinoma of the prostate","type":"exact"},{"name":"prostate colloid adenocarcinoma","type":"exact"}],"termid":"MONDO:0006067","xrefs":{"Monarch":{"xref_id":"0006067"}}}


id: PBO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent amino acid oxidase (predicted)","termid":"PBO:0001943"}


id: PBO:0047145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 180 member A","termid":"PBO:0047145"}


id: GO:0050960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a temperature stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in sensory perception","termid":"GO:0050961"},{"relation_name":"part_of","term_name":"thermoception","termid":"GO:0050955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in thermoception","synonyms":[{"name":"sensory detection of temperature stimulus during thermoception","type":"exact"},{"name":"sensory detection of thermal stimulus during thermoception","type":"exact"},{"name":"sensory transduction of temperature stimulus during thermoception","type":"exact"},{"name":"sensory transduction of thermal stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of temperature stimulus","type":"exact"},{"name":"thermoception, sensory detection of thermal stimulus","type":"exact"},{"name":"thermoception, sensory transduction of temperature stimulus","type":"exact"},{"name":"thermoception, sensory transduction of thermal stimulus","type":"exact"}],"termid":"GO:0050960"}


id: PBO:0039715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 1","termid":"PBO:0039715"}


id: PBO:0049828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGF like 3","termid":"PBO:0049828"}


id: FYPO:0008385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the nucleus during Endoplasmic Reticulum stress is abolished.","definition_xrefs":["PMID:37939137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished nucleophagy during cellular response to Endoplasmic Reticulum stress","termid":"FYPO:0008385"}


id: MONDO:0004710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a uterus.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterus carcinoma in situ","secondary_identifiers":["DOID:9108","SCTID:92788005","ICD9:233.2","MEDGEN:673127","UMLS:C0686237"],"synonyms":[{"name":"carcinoma in situ of uterus","type":"exact"},{"name":"stage 0 uterus carcinoma","type":"exact"},{"name":"uterus in situ carcinoma","type":"exact"}],"termid":"MONDO:0004710","xrefs":{"Monarch":{"xref_id":"0004710"}}}


id: PBO:0058326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4699","termid":"PBO:0058326"}


id: GO:0047853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + bis-D-fructose 2',1:2,1'-dianhydride = inulobiose.","definition_xrefs":["MetaCyc:DIFRUCTOSE-ANHYDRIDE-SYNTHASE-RXN","RHEA:15041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"difructose-anhydride synthase activity","secondary_identifiers":["EC:4.2.1.179"],"synonyms":[{"name":"bis-D-fructose 2',1:2,1'-dianhydride fructohydrolase activity","type":"related"},{"name":"inulobiose hydrolase activity","type":"related"}],"termid":"GO:0047853"}


id: PATO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"texture","termid":"PATO:0000150"}


id: PBO:0058966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 9, pseudogene","termid":"PBO:0058966"}


id: GO:0120500
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric E1 complex that activates the ubiquitin-like protein NEDD8. In humans the subunits are NAE1 (also known as APPBP1) and UBA3.","definition_xrefs":["PMID:12740388","PMID:21931660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NAE1-UBA3 complex","synonyms":[{"name":"APPBP1-UBA3 complex","type":"exact"},{"name":"NAE","type":"exact"},{"name":"NEDD8 activating enzyme","type":"exact"}],"termid":"GO:0120500"}


id: PBO:0088929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc5","termid":"PBO:0088929"}


id: MONDO:0016323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic respiratory distress with surfactant metabolism deficiency","secondary_identifiers":["GARD:17127","MEDGEN:1679491","UMLS:C5190853","Orphanet:217566"],"termid":"MONDO:0016323","xrefs":{"Monarch":{"xref_id":"0016323"}}}


id: PBO:0055098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2516","termid":"PBO:0055098"}


id: MONDO:1010098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital heart disease caused by pathogenic variation(s) in the TFAP2B gene, which encodes the transcription factor AP-2β. This disorder is characterized by patent ductus arteriosus, facial dysmorphism and hand anomalies. Additional features include sensorineural hearing loss, scoliosis, dental anomalies, and central diabetes insipidus. Given the spectrum of symptoms associated with this condition, patients may exhibit a combination of these features. The underlying mechanism of the spectrum disorder is both dominant negative and loss-of-function. Pathogenic missense variants reported in Char syndrome patients appear to be dominant negative while loss-of-function alleles in PDA patients are likely to act through haploinsufficiency.","definition_xrefs":["Orphanet:466729","PMID:31012281","Orphanet:46627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"TFAP2B-related congenital heart disease spectrum disorder","synonyms":[{"name":"TFAP2B-related PDA and Char syndrome spectrum disorder","type":"exact"}],"termid":"MONDO:1010098","xrefs":{"Monarch":{"xref_id":"1010098"}}}


id: GO:0002762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte differentiation","termid":"GO:1902106"},{"relation_name":"negatively_regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid leukocyte differentiation","synonyms":[{"name":"down regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"down-regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"downregulation of myeloid leukocyte differentiation","type":"exact"},{"name":"inhibition of myeloid leukocyte differentiation","type":"narrow"}],"termid":"GO:0002762"}


id: PBO:0013817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A4","termid":"PBO:0013817"}


id: GO:0055025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle tissue development","termid":"GO:0045844"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue development","termid":"GO:0055024"},{"relation_name":"positively_regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle tissue development","synonyms":[{"name":"activation of cardiac muscle development","type":"narrow"},{"name":"positive regulation of heart muscle development","type":"exact"},{"name":"stimulation of cardiac muscle development","type":"narrow"},{"name":"up regulation of cardiac muscle development","type":"exact"},{"name":"up-regulation of cardiac muscle development","type":"exact"},{"name":"upregulation of cardiac muscle development","type":"exact"}],"termid":"GO:0055025"}


id: MONDO:0012738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the AKAP9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 11","secondary_identifiers":["UMLS:C2678483","GARD:10437","MESH:C567513","OMIM:611820","DOID:0110652","MEDGEN:437218"],"synonyms":[{"name":"AKAP9 long QT syndrome","type":"exact"},{"name":"LQT11","type":"exact"},{"name":"long QT syndrome 11","type":"exact"},{"name":"long QT syndrome caused by mutation in AKAP9","type":"exact"},{"name":"long QT syndrome type 11","type":"exact"}],"termid":"MONDO:0012738","xrefs":{"Monarch":{"xref_id":"0012738"}}}


id: PBO:0027956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027956"}


id: GO:1903160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any nickel cation transmembrane transporter activity that is involved in nickel cation import into cell.","definition_xrefs":["GOC:dos","ISBN:0-8249-3695-6","GOC:TermGenie","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete nickel cation transmembrane transporter activity involved in nickel cation import into cell (obsolete GO:1903160)","synonyms":[{"name":"nickel cation transmembrane transporter activity involved in nickel cation import into cell","type":"exact"},{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity involved in nickel cation import into cell","type":"related"}],"termid":"GO:1903160"}


id: GO:0031320
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hexitol + acceptor = hexose + reduced acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hexitol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031320","terms_by_termid":{"GO:0046526":null}}


id: MONDO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cicatricial entropion","secondary_identifiers":["MEDGEN:509840","SCTID:67383002","ICD9:374.04","UMLS:C0155191","DOID:13113"],"termid":"MONDO:0001637","xrefs":{"Monarch":{"xref_id":"0001637"}}}


id: PBO:0029406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NADPH-hemoprotein_reductase_activity","termid":"PBO:0029406"}


id: GO:1905538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a polysome.","definition_xrefs":["GOC:TermGenie","PMID:18426977","GOC:PARL","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete polysome binding (obsolete GO:1905538)","synonyms":[{"name":"polyribosome binding","type":"exact"}],"termid":"GO:1905538"}


id: GO:0007401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete pan-neural process (obsolete GO:0007401)","synonyms":[{"name":"pan-neural process","type":"exact"}],"termid":"GO:0007401"}


id: PBO:0054983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2397","termid":"PBO:0054983"}


id: PBO:0031203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cisplatin","termid":"PBO:0031203"}


id: GO:0070654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a sensory epithelium following its loss or destruction.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium regeneration","termid":"GO:1990399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory epithelium regeneration","termid":"GO:0070654"}


id: MONDO:1012204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteodystrophy, non-human animal","termid":"MONDO:1011951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodystrophy, cattle","secondary_identifiers":["OMIA:000753-9913"],"termid":"MONDO:1012204","xrefs":{"Monarch":{"xref_id":"1012204"}}}


id: MONDO:1011307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal disorder, non-human animal","termid":"MONDO:1011307","xrefs":{"Monarch":{"xref_id":"1011307"}}}


id: MONDO:0021368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the major salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of salivary gland","termid":"MONDO:0021357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of major salivary gland","secondary_identifiers":["NCIT:C4407","MEDGEN:83383","UMLS:C0345599","SCTID:126787005"],"synonyms":[{"name":"major salivary gland neoplasm","type":"exact"},{"name":"major salivary gland neoplasm (disease)","type":"exact"},{"name":"major salivary gland tumor","type":"exact"},{"name":"major salivary gland tumour","type":"exact"},{"name":"neoplasm of major salivary gland","type":"exact"},{"name":"neoplasm of the Major salivary gland","type":"exact"},{"name":"tumor of Major salivary gland","type":"exact"},{"name":"tumor of major salivary gland","type":"exact"},{"name":"tumor of the Major salivary gland","type":"exact"},{"name":"tumour of Major salivary gland","type":"exact"},{"name":"tumour of major salivary gland","type":"exact"},{"name":"tumour of the Major salivary gland","type":"exact"}],"termid":"MONDO:0021368","xrefs":{"Monarch":{"xref_id":"0021368"}}}


id: MONDO:0007258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine teeth, absence of upper permanent","secondary_identifiers":["OMIM:114600","MEDGEN:396244","UMLS:C1861899"],"synonyms":[{"name":"canine teeth, absence of upper permanent","type":"exact"}],"termid":"MONDO:0007258","xrefs":{"Monarch":{"xref_id":"0007258"}}}


id: PBO:0113265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide binding protein; required for vesicle formation in cytoplasm-to-vacuole targeting (CVT) pathway, autophagy, micronucleophagy and mitophagy; binds to several phosphoinositides including PtdIns(3,5)P2, PI3P and PI4P; involved in PI3P-dependent recruitment and organization of both Atg12-Atg5-Atg16 complex and Atg8p at pre-autophagosomal structure; necessary for oxidant-induced cell death; targeted to vacuole via AP-3 pathway; WD-40 repeat containing PROPPIN family member","termid":"PBO:0113265"}


id: FYPO:0003574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003574"}


id: PBO:0065044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2 pseudogene 1","termid":"PBO:0065044"}


id: GO:1902471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie","PMID:22786806","PMID:19959363","PMID:21246752"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring localization (obsolete GO:1902471)","termid":"GO:1902471"}


id: PBO:0068414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanylyltransferase and 5'-phosphatase","termid":"PBO:0068414"}


id: MONDO:0020800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition in which there is degeneration of the myelin sheath that covers the nerves of the central nervous system.","definition_xrefs":["NCIT:C34526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"demyelinating disease of central nervous system","secondary_identifiers":["SCTID:6118003","MEDGEN:3719","UMLS:C0011302","ICD10CM:G35-G37","ICD9:341.8","ICD9:341.9"],"synonyms":[{"name":"demyelinating CNS disease","type":"exact"},{"name":"demyelinating disease central nervous system (CNS)","type":"exact"},{"name":"demyelinating disease of central nervous system","type":"exact"},{"name":"demyelinating disorder of central nervous system","type":"exact"},{"name":"demyelinating disorders of the central nervous system","type":"exact"}],"termid":"MONDO:0020800","xrefs":{"Monarch":{"xref_id":"0020800"}}}


id: GO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the mesonephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in mesonephros development","synonyms":[{"name":"mesonephros pattern formation","type":"related"},{"name":"mesonephros pattern specification","type":"exact"}],"termid":"GO:0061227"}


id: PR:O13971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar MIF4G domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01279","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of glycerol defect protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.11","secondary_identifiers":["UniProtKB:O13971"],"synonyms":[{"name":"Spom972h-NOM1","type":"exact"}],"termid":"PR:O13971"}


id: GO:0009712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a compound containing a pyrocatechol (1,2-benzenediol) nucleus or substituent.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound metabolic process","synonyms":[{"name":"catechol metabolic process","type":"related"},{"name":"catechol metabolism","type":"related"}],"termid":"GO:0009712"}


id: GO:1990595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with basic secretagogues to initiate pseudo-allergic reactions in mast cells.","definition_xrefs":["GOC:sp","PMID:25517090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"mast cell secretagogue receptor activity","termid":"GO:1990595"}


id: PBO:0062195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily S member 1","termid":"PBO:0062195"}


id: PBO:0079646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2R2 antisense RNA 1","termid":"PBO:0079646"}


id: PATO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to produce only one differentiated cell type.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Unipotent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unipotent","termid":"PATO:0001400"}


id: PBO:0052511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 25","termid":"PBO:0052511"}


id: PBO:0030576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_methionine_level","termid":"PBO:0030576"}


id: PBO:0041855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 3","termid":"PBO:0041855"}


id: PR:O94688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apc15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.04","synonyms":[{"name":"20S cyclosome/APC complex protein apc15 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-apc15","type":"exact"}],"termid":"PR:O94688"}


id: PBO:0077171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 2","termid":"PBO:0077171"}


id: GO:0030055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell junction that forms a connection between a cell and the extracellular matrix.","definition_xrefs":["PMID:10419689","PMID:16805308","PMID:26923917","GOC:bc","PMID:8314002","GOC:mah","PMID:1643657","GOC:hb","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anchoring junction","termid":"GO:0070161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-substrate junction","synonyms":[{"name":"cell-matrix junction","type":"exact"}],"termid":"GO:0030055"}


id: PBO:0032731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase beta subunit Sir1","termid":"PBO:0032731"}


id: SO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exonic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["SO:ke","PMID:23241926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splicing_silencer","synonyms":[{"name":"ESS","type":"exact"},{"name":"exonic splicing silencer","type":"exact"}],"termid":"SO:0002058"}


id: GO:0048447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the sepal are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"sepal development","termid":"GO:0048442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal morphogenesis","secondary_identifiers":["GO:0048422"],"termid":"GO:0048447"}


id: GO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cholesterol transport","termid":"GO:0030301"}


id: PBO:0116788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZHX2 antisense RNA 2","termid":"PBO:0116788"}


id: MONDO:0005572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia resulting from hypoxia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"polycythemia due to hypoxia","secondary_identifiers":["DOID:2835","NCIT:C27312","UMLS:C0856818","MEDGEN:163546"],"termid":"MONDO:0005572","xrefs":{"Monarch":{"xref_id":"0005572"}}}


id: GO:0160035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Toll receptor ligand protein activation cascade.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160033"},{"relation_name":"is_a","term_name":"negative regulation of protein activation cascade","termid":"GO:2000258"},{"relation_name":"negatively_regulates","term_name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160035"}


id: PR:P87293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16A10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized UPF0442 protein C16A10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.01","synonyms":[{"name":"Spom972h-SPAC16A10.01","type":"exact"}],"termid":"PR:P87293"}


id: PBO:0054326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1719","termid":"PBO:0054326"}


id: GO:0043415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increase the rate of skeletal muscle regeneration.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"positively_regulates","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle tissue regeneration","synonyms":[{"name":"activation of skeletal muscle regeneration","type":"narrow"},{"name":"stimulation of skeletal muscle regeneration","type":"narrow"},{"name":"up regulation of skeletal muscle regeneration","type":"exact"},{"name":"up-regulation of skeletal muscle regeneration","type":"exact"},{"name":"upregulation of skeletal muscle regeneration","type":"exact"}],"termid":"GO:0043415"}


id: RO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eats","termid":"RO:0002470"}


id: PBO:0086271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein whose expression is induced during sporulation; not required for sporulation; heterologous expression in E. coli induces the SOS response that senses DNA damage","termid":"PBO:0086271"}


id: PBO:0082398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p); involved in protein translocation into the endoplasmic reticulum; interacts with the exocyst complex and also with Rtn1p; cotranslationally N-acetylated by NatA; SBH1 has a paralog, SBH2, that arose from the whole genome duplication","termid":"PBO:0082398"}


id: PBO:0034063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kills","termid":"PBO:0034063"}


id: SO:0005848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_cassette_member","synonyms":[{"name":"gene cassette member","type":"exact"}],"termid":"SO:0005848"}


id: MONDO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolffian duct adenoma (obsolete MONDO:0002364)","termid":"MONDO:0002364","xrefs":{"Monarch":{"xref_id":"0002364"}}}


id: MONDO:0100445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by biallelic variants in the LCA5 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"LCA5-related retinopathy","synonyms":[{"name":"LCA5","type":"narrow"},{"name":"LCA5 Leber congenital amaurosis","type":"narrow"},{"name":"LCA5 retinopathy","type":"exact"},{"name":"LCA5-related retinopathy","type":"exact"},{"name":"Leber congenital amaurosis 5","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in LCA5","type":"narrow"},{"name":"Leber congenital amaurosis type 5","type":"narrow"},{"name":"amaurosis congenita of Leber, type 5","type":"narrow"}],"termid":"MONDO:0100445","xrefs":{"Monarch":{"xref_id":"0100445"}}}


id: PBO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 4","termid":"PBO:0072671"}


id: MONDO:0700228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exudative vitreoretinopathy with or without osteoporosis caused by variants in the LRP5 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"exudative vitreoretinopathy","termid":"MONDO:0019516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"LRP5-related exudative vitreoretinopathy","synonyms":[{"name":"LRP5-related exudative vitreoretinopathy with or without osteoporosis","type":"exact"}],"termid":"MONDO:0700228","xrefs":{"Monarch":{"xref_id":"0700228"}}}


id: MONDO:0011905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial hypercholanemia (obsolete MONDO:0011905)","termid":"MONDO:0011905","xrefs":{"Monarch":{"xref_id":"0011905"}}}


id: GO:0060082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reflex process in which a mechanical stimulus applied to the eye elicits a response of the eyelid closing.","definition_xrefs":["GOC:dph","PMID:2913208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye blink reflex","synonyms":[{"name":"nictitating membrane reflex","type":"exact"}],"termid":"GO:0060082"}


id: MONDO:0014471
data:
  {"annotated_genes":["SJAG_02564","SJAG_07003","SJAG_00133","SJAG_01503"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020727"},{"annotations":[88625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032869"},{"annotations":[86843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014091"},{"annotations":[87230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011421"},{"annotations":[88294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957254"},{"annotations":[88293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957255"}]},"cv_name":"mondo","definition":"A rare, genetic, mitochondrial oxidative phosphorylation disorder that may present with a wide range of symptoms (including muscular hypotonia, hypertrophic cardiomyopathy, psychomotor delay, encephalopathy, peripheral neuropathy, lactic acidosis, 3-methylglutaconic aciduria) and clinical syndromes (including NARP and MILS).","definition_xrefs":["Orphanet:254913"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete isolated oxidative phosphorylation complex disorder (obsolete MONDO:0016805)","termid":"MONDO:0016805"},{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_01503":null,"SJAG_02564":null,"SJAG_07003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111143","MEDGEN:1655626","icd11.foundation:902255625","OMIMPS:604273","UMLS:C4757950","GARD:18649"],"synonyms":[{"name":"isolated ATP synthase deficiency","type":"narrow"},{"name":"isolated mitochondrial respiratory chain complex V deficiency","type":"narrow"},{"name":"mitochondrial complex V (ATP synthase) deficiency","type":"exact"}],"termid":"MONDO:0014471","terms_by_termid":{"MONDO:0011421":null,"MONDO:0014091":null,"MONDO:0020727":null,"MONDO:0032869":null,"MONDO:0957254":null,"MONDO:0957255":null},"xrefs":{"Monarch":{"xref_id":"0014471"}}}


id: GO:0150060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 2 (AMY2), a G protein-coupled receptor complex, on the surface of the target cell. The AMY2 signaling pathway can also be initiated by adrenomedullin (AM/ADM).","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"amylin receptor 2 signaling pathway","synonyms":[{"name":"AMY2 signaling pathway","type":"exact"}],"termid":"GO:0150060"}


id: GO:1904118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:25677106","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"}


id: GO:0034376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a discoidal high-density lipoprotein (HDL) particle acquires additional lipid or protein molecules, and cholesterol in the particle is converted to tightly bound cholesterol esters by the action of phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT), resulting in the formation of a spherical HDL particle.","definition_xrefs":["GOC:mah","GOC:pde","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-density lipoprotein particle remodeling","termid":"GO:0034375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conversion of discoidal high-density lipoprotein particle to spherical high-density lipoprotein particle","synonyms":[{"name":"conversion of discoidal HDL to spherical HDL","type":"exact"},{"name":"discoidal HDL remodeling","type":"related"},{"name":"discoidal high-density lipoprotein remodeling","type":"related"}],"termid":"GO:0034376"}


id: GO:0006449
data:
  {"annotated_genes":["SJAG_02189","SJAG_02812","SJAG_00642","SJAG_05265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75705],"is_not":false,"summary":null,"term":"GO:0006449"},{"annotations":[70235,67770,78222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational termination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"translational termination","termid":"GO:0006415"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00642":null,"SJAG_02189":null,"SJAG_02812":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational termination","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null},"termid":"GO:0006449","terms_by_termid":{"GO:0006449":null,"GO:0045905":null}}


id: PBO:0005635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein Mrp49 (predicted)","termid":"PBO:0005635"}


id: PBO:0059395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S28","termid":"PBO:0059395"}


id: PBO:0001180
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp Five interacting potential Transmembrane Protein","termid":"PBO:0001180"}


id: GO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo sac over time, from its formation as the megaspore to the mature structure. The process begins when three of the four haploid megaspores disintegrate, and the fourth undergoes mitosis giving rise to a binucleate syncytial embryo sac. The two haploid nuclei migrate to the opposite poles of the embryo sac and then undergo two rounds of mitosis generating four haploid nuclei at each pole. One nucleus from each set of four migrates to the center of the cell. Cellularization occurs, resulting in an eight-nucleate seven-celled structure. This structure contains two synergid cells and an egg cell at the micropylar end, and three antipodal cells at the other end. A binucleate endosperm mother cell is formed at the center.","definition_xrefs":["GOC:jl","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"embryo sac development","termid":"GO:0009553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megagametogenesis","secondary_identifiers":["Wikipedia:Megagametogenesis"],"synonyms":[{"name":"embryo sac development from the megaspore","type":"exact"},{"name":"megagametophyte nucleus division","type":"exact"}],"termid":"GO:0009561"}


id: MONDO:0016330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hypertrophic cardiomyopathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy","termid":"MONDO:0005045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"non-familial hypertrophic cardiomyopathy","secondary_identifiers":["Orphanet:217598","UMLS:C5680883","MEDGEN:1843178"],"synonyms":[{"name":"acquired hypertrophic cardiomyopathy","type":"exact"}],"termid":"MONDO:0016330","xrefs":{"Monarch":{"xref_id":"0016330"}}}


id: PBO:0081711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 630","termid":"PBO:0081711"}


id: PBO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1 (predicted)","termid":"PBO:0017096"}


id: PBO:0060095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 42","termid":"PBO:0060095"}


id: PBO:0081880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 827","termid":"PBO:0081880"}


id: GO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TPR domain binding","synonyms":[{"name":"tetratricopeptide repeat domain binding","type":"exact"}],"termid":"GO:0030911"}


id: MONDO:0014610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ciliary dyskinesia, primary, 31 (obsolete MONDO:0014610)","synonyms":[{"name":"moved to 243605","type":"related"}],"termid":"MONDO:0014610","xrefs":{"Monarch":{"xref_id":"0014610"}}}


id: GO:0033599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland epithelial cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mammary gland epithelial cell proliferation","termid":"GO:0033599"}


id: MONDO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete agammaglobulinemia (obsolete MONDO:0002349)","termid":"MONDO:0002349","xrefs":{"Monarch":{"xref_id":"0002349"}}}


id: PBO:0048813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 2","termid":"PBO:0048813"}


id: GO:0044475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts the activity of a high voltage-gated calcium channel in another organism via the action of a venom.","definition_xrefs":["GOC:jl","PMID:20920515","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated inhibition of voltage-gated calcium channel activity","termid":"GO:0044474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated inhibition of high voltage-gated calcium channel activity","synonyms":[{"name":"envenomation resulting in negative regulation of high voltage-gated calcium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of high voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044475"}


id: FYPO:0004931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during sporulation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during sporulation","synonyms":[{"name":"normal RNA accumulation during sporulation","type":"related"},{"name":"normal cellular RNA level during sporulation","type":"exact"},{"name":"normal mRNA level during sporulation","type":"narrow"},{"name":"normal transcript level during sporulation","type":"exact"}],"termid":"FYPO:0004931"}


id: FYPO:0007496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear exosome focus at the sme2 locus does not occur. Other nuclear exosome foci may form normally.","definition_xrefs":["PMID:24920274","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nuclear exosome focus","termid":"FYPO:0003042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nuclear exosome focus at sme2 locus","synonyms":[{"name":"abolished protein localisation to nuclear exosome focus at sme2 locus","type":"exact"},{"name":"abolished protein localization to Mmi1 nuclear focus at sme2 locus","type":"exact"},{"name":"abolished protein localization to nuclear exosome focus at sme2 locus during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear exosome focus at sme2 locus during vegetative growth","type":"exact"}],"termid":"FYPO:0007496"}


id: PBO:0056385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 15","termid":"PBO:0056385"}


id: MONDO:0021630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lipoma that involves the face.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoma of face","secondary_identifiers":["ICD9:214.0","UMLS:C0153968","MEDGEN:509492","SCTID:93159009"],"synonyms":[{"name":"face lipoma","type":"exact"}],"termid":"MONDO:0021630","xrefs":{"Monarch":{"xref_id":"0021630"}}}


id: PBO:0052458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 7 pseudogene 1","termid":"PBO:0052458"}


id: _global:contains
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The inverse of contained_by.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contains","termid":"_global:contains"}


id: GO:1990834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an odorant stimulus. An odorant is any substance capable of stimulating the sense of smell.","definition_xrefs":["PMID:11268007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to odorant","termid":"GO:1990834"}


id: PBO:0053225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain","termid":"PBO:0053225"}


id: MONDO:0006733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by dryness of the cornea and conjunctiva. It is usually caused by a deficiency in tear production. Symptoms include a feeling of burning eyes and a possible foreign body presence in the eye.","definition_xrefs":["NCIT:C34553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dry eye syndrome","secondary_identifiers":["MESH:D007638","MEDGEN:4411","MedDRA:10013777","MedDRA:100233350","DOID:10140","SCTID:302896008","DOID:12895","MESH:D015352","EFO:1000906","ICD9:375.15","ICD10CM:H04.12","SCTID:46152009","UMLS:C0013238"],"synonyms":[{"name":"KCS","type":"exact"},{"name":"dry eye","type":"exact"},{"name":"dry eye syndrome","type":"exact"},{"name":"dry eye(s)","type":"exact"},{"name":"eye(s), dry","type":"exact"},{"name":"keratoconjunctivitis sicca","type":"exact"},{"name":"sicca, keratoconjunctivitis","type":"exact"},{"name":"tear film insufficiency","type":"exact"}],"termid":"MONDO:0006733","xrefs":{"Monarch":{"xref_id":"0006733"}}}


id: MONDO:0022918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease that has its basis in the disruption of cytokine activity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokine deficiency (obsolete MONDO:0022918)","synonyms":[{"name":"cytokine activity disease","type":"exact"},{"name":"disorder of cytokine activity","type":"exact"}],"termid":"MONDO:0022918","xrefs":{"Monarch":{"xref_id":"0022918"}}}


id: MONDO:0007970
data:
  {"annotated_genes":["SJAG_01181","SJAG_00993","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87221,87222,87223],"is_not":false,"summary":null,"term":"MONDO:0007970"}]},"cv_name":"mondo","definition":"Melorheostosis is a rare connective tissue disorder characterized by a sclerosing bone dysplasia, usually limited to one side of the body (rarely bilateral), that manifests with pain, stiffness, joint contractures and deformities.","definition_xrefs":["Orphanet:2485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"is_obsolete":false,"name":"melorheostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84887","GARD:9474","MESH:D008557","NANDO:2201364","ICD9:756.89","MEDGEN:460981","DOID:4253","UMLS:C3149631","SCTID:44697002","NORD:1431","OMIM:155950","MedDRA:10050284","icd11.foundation:312433776"],"synonyms":[{"name":"Mel","type":"related"},{"name":"melorheostosis, isolated","type":"related"},{"name":"melorheostosis, isolated, somatic mosaic","type":"exact"}],"termid":"MONDO:0007970","terms_by_termid":{"MONDO:0007970":null},"xrefs":{"Monarch":{"xref_id":"0007970"}}}


id: GO:0031721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a hemoglobin alpha chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobin binding","termid":"GO:0030492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"hemoglobin alpha binding","termid":"GO:0031721"}


id: PBO:0063468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDHA1 pseudogene 1","termid":"PBO:0063468"}


id: GO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromosome involved in sex determination.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"sex chromosome","termid":"GO:0000803"}


id: GO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of URM1 from one protein to another via the reaction X-URM1 + Y = Y-URM1 + X, where both the X-URM1 and Y-URM1 linkages are thioester bonds between the C-terminal amino acid of URM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"URM1 transferase activity","termid":"GO:0042294"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0016746","GO:0003674","GO:0019787"],"is_obsolete":false,"name":"URM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061658"}


id: FYPO:0004863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"has_part","term_name":"curved microtubules","termid":"FYPO:0004862"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"long curved microtubules","synonyms":[{"name":"elongated curved microtubules","type":"exact"},{"name":"long curved microtubules during mitotic cell cycle","type":"related"},{"name":"long curved microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defects, long curved microtubules","type":"exact"}],"termid":"FYPO:0004863"}


id: PBO:0045853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 43","termid":"PBO:0045853"}


id: PR:Q9US15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC607.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0653 protein C607.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.02c","synonyms":[{"name":"Spom972h-SPAC607.02c","type":"exact"}],"termid":"PR:Q9US15"}


id: GO:0039554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by inhibiting the activity of MDA-5 (also known as IFIH1). The cytoplasmic pattern recognition receptor MDA-5 detects dsRNA synthesized during active viral replication and triggers a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.","definition_xrefs":["PMID:33727702","PMID:19019954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MDA-5 activity","secondary_identifiers":["VZ:603","GO:0039539"],"synonyms":[{"name":"Inhibition of host MDA5 by virus","type":"related"},{"name":"inhibition by virus of host MDA-5 signaling","type":"related"},{"name":"inhibition of host IFIH1/MDA5 by virus","type":"related"},{"name":"suppression by virus of host IFIH1 signaling pathway","type":"related"},{"name":"suppression by virus of host MDA-5 activity","type":"related"},{"name":"suppression by virus of host MDA-5 signaling pathway","type":"related"},{"name":"suppression by virus of host MDA-5 signalling pathway","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host MDA-5 activity","type":"narrow"}],"termid":"GO:0039554"}


id: SO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing a box H/ACA sequence motif, guiding the pseudouridylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_scaRNA_gene","synonyms":[{"name":"H/ACA scaRNA gene","type":"exact"}],"termid":"SO:0002373"}


id: GO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-5 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-5 receptor activity","synonyms":[{"name":"IL-5 receptor activity","type":"exact"},{"name":"IL-5R","type":"exact"}],"termid":"GO:0004914"}


id: MONDO:1011224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectropion that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectropion, non-human animal","termid":"MONDO:1010322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectropion, dog","secondary_identifiers":["OMIA:000325-9615"],"termid":"MONDO:1011224","xrefs":{"Monarch":{"xref_id":"1011224"}}}


id: PBO:0077212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 3","termid":"PBO:0077212"}


id: GO:0075108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host adenylate cyclase activity (obsolete GO:0075108)","synonyms":[{"name":"Negative regulation by symbiont of host 3',5'-cyclic AMP synthetase activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP pyrophosphate-lyase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylylcyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host cAMP generating peptide activity","type":"related"}],"termid":"GO:0075108"}


id: MONDO:0010423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias","termid":"MONDO:0005345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias 2, X-linked","secondary_identifiers":["MESH:C567462","MEDGEN:437064","OMIM:300758","GARD:18186","UMLS:C2677879"],"synonyms":[{"name":"HYSP2","type":"related"},{"name":"hypospadias 2, X-linked","type":"exact"},{"name":"hypospadias 2, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010423","xrefs":{"Monarch":{"xref_id":"0010423"}}}


id: PBO:0083177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TEL14L-XC, which is a telomeric X element core sequence on the left arm of chromosome XIV","termid":"PBO:0083177"}


id: PBO:0077680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 11","termid":"PBO:0077680"}


id: PBO:0031560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_catalytic_activity","termid":"PBO:0031560"}


id: PATO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility quality inhering in a substance by virtue of the bearer's inability of a substance to dissolve in a liquid.","definition_xrefs":["edp:edp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solubility","termid":"PATO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insoluble in","synonyms":[{"name":"insoluble","type":"exact"}],"termid":"PATO:0001538"}


id: PR:O94262
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vac7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar segregation protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.13","synonyms":[{"name":"Spom972h-vac7","type":"exact"}],"termid":"PR:O94262"}


id: GO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of germinal center formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"germinal center formation","termid":"GO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of germinal center formation","termid":"GO:0002634"}


id: PBO:0017566
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anencephaly","termid":"PBO:0017566"}


id: PBO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp9","termid":"PBO:0004267"}


id: FYPO:0004813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at tRNA genes (tDNA) is abnormal.","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription at tDNA","synonyms":[{"name":"abnormal RNA polymerase II release at tDNA","type":"related"},{"name":"abnormal RNA polymerase II transcription termination at tDNA","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at tDNA during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription at tDNA during vegetative growth","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at transfer RNA genes","type":"related"}],"termid":"FYPO:0004813"}


id: GO:0002758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by a ligand binding to its receptor that lead to the activation or perpetuation of an innate immune response.","definition_xrefs":["GOC:jy","PMID:28105028","PMID:11418339","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune response-activating signaling pathway","termid":"GO:0002757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"innate immune response-activating signaling pathway","secondary_identifiers":["GO:0010204","GO:0009870"],"synonyms":[{"name":"defence response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signaling pathway, resistance gene-independent","type":"related"},{"name":"defence response signalling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signalling pathway, resistance gene-independent","type":"related"},{"name":"defense response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defense response signaling pathway, resistance gene-independent","type":"related"},{"name":"defense response signalling pathway, resistance gene-dependent","type":"related"},{"name":"effector triggered immunity","type":"broad"},{"name":"effector-triggered immune signaling","type":"related"},{"name":"effector-triggered immunity","type":"broad"}],"termid":"GO:0002758"}


id: FYPO:0001636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular glutamine level","synonyms":[{"name":"normal cellular L-glutamine level","type":"exact"},{"name":"normal cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutamine level during vegetative growth","type":"exact"},{"name":"normal level of glutamine in cell","type":"exact"}],"termid":"FYPO:0001636"}


id: GO:0018451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ethene oxide + NAD+ + CoA-SH = NADH + H+ + acetyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete epoxide dehydrogenase activity (obsolete GO:0018451)","termid":"GO:0018451"}


id: GO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + H2O = GMP + mannose-1-phosphate.","definition_xrefs":["PMID:16766526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"GDP-mannose hydrolase activity","synonyms":[{"name":"GDP-mannose pyrophosphatase activity","type":"related"}],"termid":"GO:0052751"}


id: PBO:0085937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA transcribed as part of a bicistronic transcript with a predicted transcriptional repressor RGM1/YMR182C; mRNA is destroyed by nonsense-mediated decay (NMD); not an essential gene; YMR181C has a paralog, YPL229W, that arose from the whole genome duplication","termid":"PBO:0085937"}


id: GO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of oxaloacetate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete oxaloacetate secondary active transmembrane transporter activity (obsolete GO:0000227)","synonyms":[{"name":"oxaloacetate carrier activity","type":"related"}],"termid":"GO:0000227"}


id: MONDO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sodoku disease (obsolete MONDO:0001432)","termid":"MONDO:0001432","xrefs":{"Monarch":{"xref_id":"0001432"}}}


id: GO:0034632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of retinol from one side of a membrane to the other. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"retinol transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-1467466","Reactome:R-HSA-2466749","Reactome:R-HSA-2466802"],"synonyms":[{"name":"retinol transporter activity","type":"related"},{"name":"vitamin A1 transporter activity","type":"exact"}],"termid":"GO:0034632"}


id: GO:0022035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell within a rhombomere. This process is known to occur as an early step in the generation of anatomical structure from a rhombomere.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021","PMID:15629700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere cell migration","termid":"GO:0022035"}


id: PBO:0060667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudE neurodevelopment protein 1","termid":"PBO:0060667"}


id: PBO:0073834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 10","termid":"PBO:0073834"}


id: PBO:0031662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_modification_during_vegetative_growth","termid":"PBO:0031662"}


id: PBO:0066657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal oxygenase 1","termid":"PBO:0066657"}


id: GO:0022032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of telencephalon oligodendrocyte cells, resulting in the expansion of a cell population.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon oligodendrocyte cell migration","termid":"GO:0022032"}


id: PBO:0004981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF2429 family","termid":"PBO:0004981"}


id: PBO:0011163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methyltransferase (predicted)","termid":"PBO:0011163"}


id: PBO:0113165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine 5'-monophosphate (IMP)-specific 5'-nucleotidase; catalyzes the breakdown of IMP to inosine; responsible for production of nicotinamide riboside and nicotinic acid riboside; tetrameric form negatively regulated by inosine and ATP; expression positively regulated by nicotinic acid and glucose availability; does not show similarity to known 5'-nucleotidases from other organisms","termid":"PBO:0113165"}


id: MONDO:0006293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant mixed neoplasm (obsolete MONDO:0006293)","termid":"MONDO:0006293","xrefs":{"Monarch":{"xref_id":"0006293"}}}


id: SO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by pyrosequencing technology.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrosequenced_read","synonyms":[{"name":"pyorsequenced read","type":"related"}],"termid":"SO:0001424"}


id: PBO:0088380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase","termid":"PBO:0088380"}


id: MONDO:0042970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of glutamate decarboxylase activity.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of glutamate decarboxylase","secondary_identifiers":["UMLS:C1291560","GTR:AN0168165","SCTID:124596009","ICD9:277.6","MEDGEN:452941","GTR:AN0264281"],"synonyms":[{"name":"deficiency of glutamate decarboxylase","type":"exact"},{"name":"disorder of glutamate decarboxylase activity","type":"exact"},{"name":"glutamate decarboxylase activity disease","type":"exact"},{"name":"glutamate decarboxylase deficiency","type":"related"}],"termid":"MONDO:0042970","xrefs":{"Monarch":{"xref_id":"0042970"}}}


id: GO:0033195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkyl hydroperoxide stimulus. Alkyl hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH, where the substituent is an alkyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hydroperoxide","termid":"GO:0033194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alkyl hydroperoxide","termid":"GO:0033195"}


id: GO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable heterodimeric complex composed of polycystin-1 and polycystin-2.","definition_xrefs":["GOC:hjd","PMID:11901144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"polycystin complex","termid":"GO:0002133"}


id: FYPO:0002949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of substance in cell during G0","synonyms":[{"name":"increased accumulation of substance in cell during G0","type":"related"},{"name":"increased level of substance in cell during cell quiescence","type":"exact"},{"name":"increased level of substance in cell during quiescence","type":"exact"},{"name":"increased substance level during G0","type":"exact"}],"termid":"FYPO:0002949"}


id: FYPO:0003640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0000654","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal adenylate kinase activity","termid":"FYPO:0003640"}


id: MONDO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial DNA depletion syndrome 6 (obsolete MONDO:0000868)","synonyms":[{"name":"MTDPS6","type":"exact"},{"name":"mitochondrial DNA depletion syndrome type 6","type":"exact"}],"termid":"MONDO:0000868","xrefs":{"Monarch":{"xref_id":"0000868"}}}


id: GO:0045621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"positively_regulates","term_name":"lymphocyte differentiation","termid":"GO:0030098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte differentiation","synonyms":[{"name":"activation of lymphocyte differentiation","type":"narrow"},{"name":"positive regulation of lymphocyte development","type":"related"},{"name":"stimulation of lymphocyte differentiation","type":"narrow"},{"name":"up regulation of lymphocyte differentiation","type":"exact"},{"name":"up-regulation of lymphocyte differentiation","type":"exact"},{"name":"upregulation of lymphocyte differentiation","type":"exact"}],"termid":"GO:0045621"}


id: PBO:0088478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid separation inhibitor, securin","termid":"PBO:0088478"}


id: PBO:0075176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 6","termid":"PBO:0075176"}


id: GO:0008347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration","secondary_identifiers":["GO:0043359"],"synonyms":[{"name":"glia cell migration","type":"exact"}],"termid":"GO:0008347"}


id: PBO:0031037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_kinetochore_organization","termid":"PBO:0031037"}


id: GO:0016457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of proteins on DNA to form the complex that mediates dosage compensation on the X chromosome of the heterogametic sex, ultimately resulting in a two-fold increase in transcription from this chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome (obsolete GO:0016457)","synonyms":[{"name":"dosage compensation complex assembly during dosage compensation by hyperactivation of X chromosome","type":"related"}],"termid":"GO:0016457"}


id: GO:1902424
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104159],"is_not":false,"summary":null,"term":"GO:1902424"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation.","definition_xrefs":["PMID:22065639","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051986"},{"relation_name":"is_a","term_name":"regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902423"},{"relation_name":"negatively_regulates","term_name":"attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0051315"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"negative regulation of attachment of mitotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"down regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"down regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"down regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"down regulation of mitotic bipolar attachment","type":"related"},{"name":"down-regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"down-regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"down-regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"down-regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"down-regulation of mitotic bipolar attachment","type":"related"},{"name":"downregulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"downregulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"downregulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"downregulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"downregulation of mitotic bipolar attachment","type":"related"},{"name":"inhibition of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"inhibition of attachment of spindle microtubules to kinetochore involved in mitosis","type":"narrow"},{"name":"inhibition of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"narrow"},{"name":"inhibition of attachment of spindle microtubules to mitotic chromosome","type":"narrow"},{"name":"inhibition of mitotic bipolar attachment","type":"related"},{"name":"negative regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"negative regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"negative regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"negative regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"negative regulation of mitotic attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"negative regulation of mitotic bipolar attachment","type":"related"}],"termid":"GO:1902424","terms_by_termid":{"GO:1902424":null}}


id: PBO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex beta subunit","termid":"PBO:0002723"}


id: GO:0098697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ryanodine-sensitive calcium-release channel activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ryanodine-sensitive calcium-release channel activity","termid":"GO:0005219"},{"relation_name":"is_a","term_name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:1905058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ryanodine-sensitive calcium-release channel activity involved in regulation of postsynaptic cytosolic calcium levels","termid":"GO:0098697"}


id: PR:Q9URW7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps17 gene.","definition_xrefs":["UniProtKB:Q9URW7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.01c","synonyms":[{"name":"Spom972h-vps17","type":"exact"}],"termid":"PR:Q9URW7"}


id: MONDO:0957423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypophysitis","termid":"MONDO:0021156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunotherapy induced hypophysitis","secondary_identifiers":["UMLS:C5816794","MEDGEN:1843401","Orphanet:641350"],"termid":"MONDO:0957423","xrefs":{"Monarch":{"xref_id":"0957423"}}}


id: PR:Q9HGM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC543.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGM4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIT family protein scs3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.08","synonyms":[{"name":"Spom972h-SPBC543.08","type":"exact"}],"termid":"PR:Q9HGM4"}


id: MONDO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peritoneum cancer that is located in the inside of the abdomen.","definition_xrefs":["DOID:1791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneum cancer","termid":"MONDO:0002087"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneal carcinoma","secondary_identifiers":["MEDGEN:756216","NCIT:C40022","SCTID:447781009","UMLS:C3163804"],"synonyms":[{"name":"carcinoma of peritoneum","type":"exact"},{"name":"peritoneum carcinoma","type":"exact"},{"name":"primary peritoneal carcinoma","type":"narrow"}],"termid":"MONDO:0002113","xrefs":{"Monarch":{"xref_id":"0002113"}}}


id: GO:0036409
data:
  {"annotated_genes":["SJAG_02629","SJAG_01385","SJAG_02165","SJAG_04815"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107112,101457,92520,106226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"}]},"cv_name":"cellular_component","definition":"A protein complex that can catalyze the acetylation of lysine at position 14 in histone H3.","definition_xrefs":["GOC:vw","PMID:21289066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01385":null,"SJAG_02165":null,"SJAG_02629":null,"SJAG_04815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"histone H3-K14 acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H3-K14 histone acetyltransferase complex","type":"exact"},{"name":"histone H3 Lys 14 (H3K14) acetyltransferase complex","type":"exact"},{"name":"histone H3K14 acetyltransferase complex","type":"exact"},{"name":"histone acetyltransferase complex (H3-K14 specific)","type":"exact"}],"termid":"GO:0036409","terms_by_termid":{"GO:0036410":null}}


id: PBO:0073808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 13","termid":"PBO:0073808"}


id: MONDO:0019773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myelomeningocele is the most severe form of spina bifida. It happens when parts of the spinal cord and nerves come through the open part of the spine. It causes nerve damage and other disabilities. Seventy to ninety percent of children with this condition also have too much fluid on their brains (hydrocephalus). This happens because fluid that protects the brain and spinal cord is unable to drain like it should. The fluid builds up, causing pressure and swelling. Without treatment, a persons head grows too big, and theymay have brain damage. Other disorders of the spinal cord may be seen, including syringomyelia and hip dislocation. The cause of myelomeningocele is unknown. However, low levels of folic acid in a woman's body before and during early pregnancy is thought to play a part in this type of birth defect.","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida cystica","termid":"MONDO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myelomeningocele","secondary_identifiers":["HP:0002475","MESH:D008591","SCTID:203994003","NANDO:1200509","DOID:0060326","NANDO:2100215","MEDGEN:7538","SCTID:414667000","UMLS:C0025312","icd11.foundation:1200528084","GARD:3475","NANDO:2200814","Orphanet:93969"],"synonyms":[{"name":"meningomyelocele","type":"related"}],"termid":"MONDO:0019773","xrefs":{"Monarch":{"xref_id":"0019773"}}}


id: PATO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a proper spatial positioning with respect to an additional entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alignment","termid":"PATO:0001652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aligned with","synonyms":[{"name":"aligned ","type":"exact"},{"name":"aligned to","type":"related"}],"termid":"PATO:0001653"}


id: GO:0039518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host cytokine activity.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cytokine activity (obsolete GO:0039518)","synonyms":[{"name":"down-regulation by virus of host cytokine activity","type":"exact"},{"name":"downregulation by virus of host cytokine activity","type":"exact"},{"name":"inhibition by virus of host cytokine activity","type":"narrow"},{"name":"negative regulation by virus of host cytokine activity","type":"exact"}],"termid":"GO:0039518"}


id: GO:0036364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of transforming growth factor beta1 (TGF-beta1) from its latent state.","definition_xrefs":["PMID:12482908","PMID:9170210","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta1 activation (obsolete GO:0036364)","synonyms":[{"name":"L-TGF-beta 1 activation","type":"exact"},{"name":"TGF-beta 1 activation","type":"exact"},{"name":"TGFB1 activation","type":"exact"},{"name":"TGFbeta 1 activation","type":"exact"},{"name":"latent-TGF-beta1 activation","type":"exact"},{"name":"transforming growth factor-beta1 activation","type":"exact"}],"termid":"GO:0036364"}


id: MONDO:0009301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 7","secondary_identifiers":["UMLS:C1856273","MEDGEN:383876","GARD:15174","DOID:0111774","OMIM:233420","MESH:C565537"],"synonyms":[{"name":"46,XY SEX reversal 7","type":"related"},{"name":"46,XY Sex reversal type 7","type":"exact"},{"name":"46,XY Sex reversal, partial or complete, Dhh-related","type":"related"},{"name":"46,XY gonadal dysgenesis, partial or complete, Dhh-related","type":"related"},{"name":"46,XY sex reversal 7","type":"exact"},{"name":"46XY sex reversal 7","type":"exact"},{"name":"SRXY7","type":"related"},{"name":"gonadal dysgenesis, XY, Male-limited","type":"related"}],"termid":"MONDO:0009301","xrefs":{"Monarch":{"xref_id":"0009301"}}}


id: MONDO:0020027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare allergic hypersensitivity disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare allergic disease (obsolete MONDO:0020027)","secondary_identifiers":["Orphanet:98050"],"synonyms":[{"name":"rare allergic disease","type":"exact"},{"name":"rare allergic hypersensitivity disease","type":"exact"},{"name":"rare allergy","type":"exact"}],"termid":"MONDO:0020027","xrefs":{"Monarch":{"xref_id":"0020027"}}}


id: GO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which membrane potential cycles through a depolarizing spike, triggered in response to depolarization above some threshold, followed by repolarization. This cycle is driven by the flow of ions through various voltage gated channels with different thresholds and ion specificities.","definition_xrefs":["ISBN:978-0-07-139011-8","GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"action potential","termid":"GO:0001508"}


id: GO:0016241
data:
  {"annotated_genes":["SJAG_05289","SJAG_04496","SJAG_04435","SJAG_02433","SJAG_01716","SJAG_03851","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[110380,110471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[99406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[108069,77078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[91296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_03851":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016241","terms_by_termid":{"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: FYPO:0004570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic sister chromatid separation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased meiotic sister chromatid separation","synonyms":[{"name":"decreased chromosome separation during meiosis II","type":"exact"},{"name":"reduced meiotic sister chromatid separation","type":"exact"}],"termid":"FYPO:0004570"}


id: PBO:0073370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 3","termid":"PBO:0073370"}


id: FYPO:0001768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"},{"relation_name":"is_a","term_name":"abolished tRNA modification","termid":"FYPO:0008344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abolished tRNA-Asp C38 methylation","synonyms":[{"name":"abolished tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"abolished tRNA-Asp methylation on C38","type":"exact"},{"name":"tRNA-Asp C38 methylation abolished","type":"exact"}],"termid":"FYPO:0001768"}


id: MONDO:0000400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of cerebral palsy characterized by both the tight muscle tone of spastic cerebral palsy and the writhing, involuntary muscle movements of athetoid cerebral palsy.","definition_xrefs":["NCIT:C97177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral palsy","termid":"MONDO:0006497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed cerebral palsy","secondary_identifiers":["UMLS:C0751024","MEDGEN:148218","DOID:0050673","ICD9:343.8","SCTID:702318008"],"termid":"MONDO:0000400","xrefs":{"Monarch":{"xref_id":"0000400"}}}


id: PBO:0040569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 4","termid":"PBO:0040569"}


id: GO:0047382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-3-phospho-1-thio-D-glycerate + H2O = S-methyl-1-thio-D-glycerate + phosphate.","definition_xrefs":["EC:3.1.3.14","RHEA:16081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"methylphosphothioglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R04317","MetaCyc:3.1.3.14-RXN"],"synonyms":[{"name":"S-methyl-3-phospho-1-thio-D-glycerate phosphohydrolase activity","type":"related"},{"name":"methylthiophosphoglycerate phosphatase activity","type":"related"}],"termid":"GO:0047382"}


id: PBO:0109229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF4 pseudogene 1","termid":"PBO:0109229"}


id: GO:1903516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single strand break repair.","definition_xrefs":["PMID:17395247","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of single strand break repair","termid":"GO:1903516"}


id: PBO:0076054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin","termid":"PBO:0076054"}


id: PBO:0073266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 10","termid":"PBO:0073266"}


id: MONDO:0015515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carnitine palmitoyltransferase II (CPT II) deficiency is an inherited metabolic disorder that affects mitochondrial oxidation of long chain fatty acids (LCFA). Three forms of CPT II deficiency have been described: a myopathic form, a severe infantile form and a neonatal form.","definition_xrefs":["Orphanet:157"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular lipidosis (obsolete MONDO:0016117)","termid":"MONDO:0016117"},{"relation_name":"is_a","term_name":"carnitine palmitoyl transferase deficiency","termid":"MONDO:0700284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"carnitine palmitoyltransferase II deficiency","secondary_identifiers":["MEDGEN:137978","DOID:0060235","ICD9:277.85","NANDO:2201133","MESH:C535589","NANDO:1200971","GARD:1121","NANDO:2200510","HGNC:2330","icd11.foundation:204058632","NANDO:2201134","UMLS:C0342790","SCTID:238002005","NCIT:C114766"],"synonyms":[{"name":"CPT II deficiency","type":"exact"},{"name":"CPT-II","type":"exact"},{"name":"CPT2","type":"exact"},{"name":"CPTII","type":"exact"},{"name":"Carnitine palmitoyltransferase 2 deficiency","type":"related"},{"name":"Carnitine palmitoyltransferase II (CPT II) deficiency","type":"related"},{"name":"Carnitine palmitoyltransferase deficiency type 2","type":"exact"},{"name":"carnitine palmitoyltransferase II deficiency","type":"exact"},{"name":"infantile carnitine palmitoyltransferase II deficiency","type":"exact"},{"name":"late-onset carnitine palmitoyltransferase II deficiency","type":"exact"},{"name":"lethal neonatal carnitine palmitoyltransferase II deficiency","type":"exact"}],"termid":"MONDO:0015515","xrefs":{"Monarch":{"xref_id":"0015515"}}}


id: PBO:0057689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1278","termid":"PBO:0057689"}


id: SO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA that catalyzes its own cleavage.","direct_ancestors":[{"relation_name":"has_quality","term_name":"ribonuclease_site","termid":"SO:0001977"},{"relation_name":"is_a","term_name":"ribozyme","termid":"SO:0000374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"self_cleaving_ribozyme","synonyms":[{"name":"self cleaving ribozyme","type":"exact"}],"termid":"SO:0002231"}


id: FYPO:0006451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which methylated histone binding by a gene product (usually a protein) in a mutant occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal methylated histone binding","termid":"FYPO:0004231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased methylated histone binding","synonyms":[{"name":"reduced methylated histone binding","type":"exact"}],"termid":"FYPO:0006451"}


id: MONDO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region Xp21.3-p21.2.","definition_xrefs":["PMID:2300556","DOID:0110413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 6","secondary_identifiers":["OMIM:312612","GARD:10377","MEDGEN:333305","UMLS:C1839368","ICD10CM:H35.5","MESH:C564065"],"synonyms":[{"name":"RP 6","type":"related"},{"name":"RP6","type":"exact"},{"name":"retinitis pigmentosa 6","type":"exact"},{"name":"retinitis pigmentosa type 6","type":"exact"},{"name":"retinitis pigmentosa, X-linked recessive, 6","type":"related"}],"termid":"MONDO:0000910","xrefs":{"Monarch":{"xref_id":"0000910"}}}


id: MONDO:0100597
data:
  {"annotated_genes":["SJAG_03286","SJAG_03448","SJAG_03032","SJAG_01536","SJAG_01826","SJAG_01625","SJAG_03333","SJAG_01465","SJAG_02717","SJAG_02099","SJAG_00898","SJAG_04358","SJAG_02523","SJAG_01570","SJAG_04654","SJAG_04119","SJAG_02774","SJAG_01702","SJAG_04084","SJAG_04645","SJAG_02042","SJAG_01070","SJAG_00886","SJAG_03635","SJAG_03147","SJAG_04704","SJAG_01991","SJAG_00325","SJAG_04640","SJAG_04321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[86854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014648"},{"annotations":[86815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0040500"},{"annotations":[88454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044319"},{"annotations":[88009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032662"},{"annotations":[87787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032665"},{"annotations":[88713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032789"},{"annotations":[88855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030533"},{"annotations":[88144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957288"},{"annotations":[88856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958204"},{"annotations":[88229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013173"},{"annotations":[87681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013528"},{"annotations":[88139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014348"},{"annotations":[88028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014409"},{"annotations":[88847,88848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012613"},{"annotations":[86855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014649"},{"annotations":[87552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014815"},{"annotations":[87339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014832"},{"annotations":[88911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014930"},{"annotations":[88775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014996"},{"annotations":[88609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015020"},{"annotations":[88439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044313"},{"annotations":[88083,88081,88082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020850"},{"annotations":[88849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012615"},{"annotations":[88051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[87539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013624"}]},"cv_name":"mondo","definition":"A broad category of disorders characterized by an impairment to the intelligence an individual possesses, caused by an autosomal recessive genetic disorder.","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary neurological 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id: GO:0015916
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"}]},"cv_name":"biological_process","definition":"The directed movement of fatty acyl coenzyme A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fatty acyl coenzyme A is an acyl group linked to 3'-phosphoadenosine-(5')diphospho(4')pantatheine (coenzyme A).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"thioester transport","termid":"GO:1901337"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"fatty-acyl-CoA transport","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"fatty acyl CoA transport","type":"exact"},{"name":"fatty acyl coenzyme A transport","type":"exact"},{"name":"fatty acyl-CoA transport","type":"exact"}],"termid":"GO:0015916","terms_by_termid":{"GO:0035348":null}}


id: PBO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7a/L8 (predicted)","termid":"PBO:0003877"}


id: GO:0080184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a phenylpropanoid stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. A phenylpropanoid is any of secondary metabolites with structures based on a phenylpropane skeleton. The class includes phenylpropanoid esters, flavonoids, anthocyanins, coumarins and many small phenolic molecules. Phenylpropanoids are also precursors of lignin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylpropanoid","termid":"GO:0080184"}


id: PATO:0000671
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000671 water value (obsolete PATO:0000671)","termid":"PATO:0000671"}


id: GO:1904860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitotic DNA replication.","definition_xrefs":["PMID:16849602","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"DNA synthesis involved in mitotic DNA replication","synonyms":[{"name":"DNA anabolism involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA anabolism involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA anabolism involved in mitotic DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA anabolism involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthesis involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA biosynthetic process involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA biosynthetic process involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA formation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA formation involved in mitotic DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA formation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA synthesis involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA synthesis involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA synthesis involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1904860"}


id: MONDO:0019681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sialidosis type 2","termid":"MONDO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"juvenile sialidosis type 2","secondary_identifiers":["Orphanet:93399","MEDGEN:1825999","SCTID:111383007","UMLS:C5681598","icd11.foundation:1730484030","GARD:19183"],"synonyms":[{"name":"dysmorphic sialidosis, juvenile form","type":"exact"}],"termid":"MONDO:0019681","xrefs":{"Monarch":{"xref_id":"0019681"}}}


id: MOD:01281
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:118#S","PubMed:16335955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EDT-iodo-PEO-biotin","termid":"MOD:00490"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-iodo-PEO-biotin - site S","synonyms":[{"name":"EDT-iodo-PEO-biotin","type":"related"},{"name":"EDT-iodoacetyl-PEO-biotin","type":"related"}],"termid":"MOD:01281"}


id: MONDO:0003142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primitive neuroectodermal tumor that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"},{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intracranial primitive neuroectodermal tumor","secondary_identifiers":["MEDGEN:272770","UMLS:C1334246","DOID:4788","NCIT:C5817"],"synonyms":[{"name":"brain primitive neuroectodermal tumor","type":"exact"},{"name":"brain primitive neuroectodermal tumour","type":"exact"},{"name":"intracranial PNET","type":"exact"},{"name":"intracranial primitive neuroectodermal neoplasm","type":"exact"},{"name":"intracranial primitive neuroectodermal tumor","type":"exact"},{"name":"primitive neuroectodermal tumor of brain","type":"exact"},{"name":"primitive neuroectodermal tumour of brain","type":"exact"}],"termid":"MONDO:0003142","xrefs":{"Monarch":{"xref_id":"0003142"}}}


id: MONDO:0008400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Presence of small calculi in the terminal salivary ducts (salivary sand), or stones (larger calculi) found in the larger ducts.","definition_xrefs":["MESH:D012465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salivary duct calculi","secondary_identifiers":["MEDGEN:19865","UMLS:C0036089","OMIM:181010"],"synonyms":[{"name":"parotid duct calculi","type":"related"},{"name":"salivary duct calculi","type":"exact"},{"name":"submandibular duct calculi","type":"related"}],"termid":"MONDO:0008400","xrefs":{"Monarch":{"xref_id":"0008400"}}}


id: PBO:0080804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xenotropic and polytropic retrovirus receptor 1","termid":"PBO:0080804"}


id: MONDO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of reduced bone mass, with decreased cortical thickness and a decrease in the number and size of the trabeculae of cancellous bone (but normal chemical composition), resulting in increased fracture incidence. Osteoporosis is classified as primary (Type 1, postmenopausal osteoporosis; Type 2, age-associated osteoporosis; and idiopathic, which can affect juveniles, premenopausal women, and middle-aged men) and secondary osteoporosis (which results from an identifiable cause of bone mass loss).","definition_xrefs":["NCIT:C3298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone resorption disease","termid":"MONDO:0000837"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteoporosis","secondary_identifiers":["GARD:11932","ICD10CM:M81","ICD9:733.09","icd11.foundation:2113001430","DOID:11476","EFO:0003882","OMIM:166710","MESH:D010024","ICD9:733.0","UMLS:C0029456","MEDGEN:14535","SCTID:64859006","ICD9:733.00"],"synonyms":[{"name":"bone mineral density variation QTL, osteoporosis","type":"exact"},{"name":"fracture, hip, susceptibility to","type":"related"},{"name":"osteoporosis, involutional","type":"related"},{"name":"osteoporosis, postmenopausal","type":"exact"},{"name":"osteoporosis, postmenopausal, susceptibility","type":"exact"},{"name":"osteoporosis, susceptibility to","type":"exact"}],"termid":"MONDO:0005298","xrefs":{"Monarch":{"xref_id":"0005298"}}}


id: GO:0050444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(II)alamin + NADP+ = 2 aquacob(III)alamin + NADPH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aquacobalamin reductase (NADPH) activity (obsolete GO:0050444)","termid":"GO:0050444"}


id: GO:1990747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of trypsinogen from the cells of the exocrine pancreas.","definition_xrefs":["PMID:12771515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"part_of","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pancreatic trypsinogen secretion","synonyms":[{"name":"pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1990747"}


id: MONDO:0015387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasolacrimal duct cyst describes a unilateral or bilateral congenital cyst of the nasolacrimal duct, which is almost always associated with dacryocystocele, presenting most commonly at birth or a few weeks of age (but rarely presenting in adulthood) as a benign, grayish blue mass in the inferomedial canthus or in the nasal cavity, that can cause epiphora, dacryocystitis (inflammation of the lacrimal sac) and nasal obstruction. It is more commonly reported in females.","definition_xrefs":["Orphanet:141083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"},{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nasolacrimal duct cyst","secondary_identifiers":["UMLS:C5575612","MEDGEN:1810477","GARD:19944"],"synonyms":[{"name":"dacryocele","type":"exact"},{"name":"dacryocystocele","type":"related"},{"name":"nasolacrimal mucocele","type":"exact"}],"termid":"MONDO:0015387","xrefs":{"Monarch":{"xref_id":"0015387"}}}


id: PBO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-3, pseudogene","termid":"PBO:0052878"}


id: GO:0033523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by addition of ubiquitin groups.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B ubiquitination (obsolete GO:0033523)","termid":"GO:0033523"}


id: MONDO:0023551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"C1q nephropathy is a kidney disease in which a large amount of protein is lost in the urine. It is one of the many diseases that can cause the nephrotic syndrome.","definition_xrefs":["GARD:0012136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"C1q nephropathy","secondary_identifiers":["GARD:12136","MEDGEN:588388","SCTID:236412002","UMLS:C0403434"],"synonyms":[{"name":"C1q nephropathy","type":"exact"}],"termid":"MONDO:0023551","xrefs":{"Monarch":{"xref_id":"0023551"}}}


id: MONDO:0033006
data:
  {"annotated_genes":["SJAG_02863"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87656],"is_not":false,"summary":null,"term":"MONDO:0033006"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Galloway-Mowat syndrome","termid":"MONDO:0009627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Galloway-Mowat syndrome 2, X-linked","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4538784","GARD:15281","MEDGEN:1625619","DOID:0080244","OMIM:301006"],"synonyms":[{"name":"GAMOS2","type":"related"},{"name":"Galloway-Mowat syndrome 2","type":"related"},{"name":"Galloway-Mowat syndrome 2, X-linked","type":"exact"},{"name":"Galloway-Mowat syndrome 2, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0033006","terms_by_termid":{"MONDO:0033006":null},"xrefs":{"Monarch":{"xref_id":"0033006"}}}


id: MONDO:1011918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, non-human animal","secondary_identifiers":["OMIA:000393"],"termid":"MONDO:1011918","xrefs":{"Monarch":{"xref_id":"1011918"}}}


id: MONDO:1010241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Giant axonal neuropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant axonal neuropathy, non-human animal","secondary_identifiers":["OMIA:001207"],"termid":"MONDO:1010241","xrefs":{"Monarch":{"xref_id":"1010241"}}}


id: MOD:00531
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartic acid with one (18)O as the result of having been deglycosylated in (18)O water.","definition_xrefs":["PubMed:14435542","Unimod:170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated L-asparagine","termid":"MOD:01293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled deglycosylated asparagine","synonyms":[{"name":"Delta:H(1)O(-1)18O(1)","type":"related"},{"name":"glycosylated asparagine 18O labeling","type":"related"}],"termid":"MOD:00531"}


id: PBO:0067233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 304, pseudogene","termid":"PBO:0067233"}


id: GO:0004775
data:
  {"annotated_genes":["SJAG_03813","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73439,77016],"is_not":false,"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate.","definition_xrefs":["PMID:9874242","RHEA:17661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase activity","termid":"GO:0004774"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"succinate-CoA ligase (ADP-forming) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00405","MetaCyc:SUCCCOASYN-RXN","Reactome:R-HSA-70997","EC:6.2.1.5"],"synonyms":[{"name":"succinate thiokinase activity","type":"related"},{"name":"succinic thiokinase","type":"broad"},{"name":"succinyl coenzyme A synthetase","type":"broad"},{"name":"succinyl coenzyme A synthetase (adenosine diphosphate-forming) activity","type":"related"},{"name":"succinyl-CoA synthetase (ADP-forming) activity","type":"related"},{"name":"succinyl-CoA synthetase activity","type":"related"}],"termid":"GO:0004775","terms_by_termid":{"GO:0004775":null}}


