# terms

id: GO:0016175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2-.","definition_xrefs":["GOC:ai","PMID:10806195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","termid":"GO:0050664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"superoxide-generating NAD(P)H oxidase activity","secondary_identifiers":["Reactome:R-HSA-6789092","Reactome:R-HSA-1222376","Reactome:R-HSA-1497810","Reactome:R-HSA-5218841","Reactome:R-HSA-5668629","Reactome:R-HSA-9673797","Reactome:R-HSA-1236967","Reactome:R-HSA-5668731","Reactome:R-HSA-5668718","Reactome:R-HSA-6807557"],"synonyms":[{"name":"cytochrome B-245","type":"related"}],"termid":"GO:0016175"}


id: GO:0120264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"}


id: PBO:0086084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; appears to form homodimers in vivo and does not complex with other Pmt proteins; target for new antifungals","termid":"PBO:0086084"}


id: GO:0070424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"regulation of NOD signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070424"}


id: PBO:0062691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 2","termid":"PBO:0062691"}


id: PBO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 3, pseudogene","termid":"PBO:0039640"}


id: PBO:0090111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI-coated vesicle associated protein","termid":"PBO:0090111"}


id: GO:0052761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [beta-(1->4)-D-glucosamine]n-[N-acetyl-D-glucosamine]m = D-glucosamine + [beta-(1->4)-D-glucosamine](n-1)-[N-acetyl-D-glucosamine]m. This reaction is the hydrolysis of chitosan or chitosan oligosaccharides to remove a D-glucosamine residue from the non-reducing termini; chitosan is a linear polysaccharide composed of randomly distributed beta-(1->4)-linked D-glucosamine and N-acetyl-D-glucosamine units.","definition_xrefs":["MetaCyc:3.2.1.165-RXN","GOC:mengo_curators","EC:3.2.1.165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"exo-1,4-beta-D-glucosaminidase activity","secondary_identifiers":["KEGG_REACTION:R08715"],"synonyms":[{"name":"chitosan exo-1,4-beta-D-glucosaminidase activity","type":"exact"},{"name":"chitosan glucosaminohydrolase activity","type":"exact"},{"name":"exo-beta-D-glucosaminidase activity","type":"related"},{"name":"exochitosanase activity","type":"related"}],"termid":"GO:0052761"}


id: GO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a protozoan is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of protozoan","synonyms":[{"name":"detection of protozoa","type":"exact"},{"name":"detection of protozoon","type":"exact"},{"name":"perception of protozoa","type":"related"}],"termid":"GO:0001563"}


id: PBO:0056537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1 pseudogene 2","termid":"PBO:0056537"}


id: GO:0030426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The migrating motile tip of a growing neuron projection, where actin accumulates, and the actin cytoskeleton is the most dynamic.","definition_xrefs":["GOC:bc","ISBN:0815316194","PMID:10082468","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"part_of","term_name":"distal axon","termid":"GO:0150034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone","secondary_identifiers":["Wikipedia:Growth_cone"],"termid":"GO:0030426"}


id: GO:0032010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by maturation of an early phagosome following the ingestion of particulate material by phagocytosis; during maturation, phagosomes acquire markers of late endosomes and lysosomes.","definition_xrefs":["GOC:mah","PMID:14733906","PMID:12388753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary lysosome","termid":"GO:0005767"},{"relation_name":"is_a","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773","GO:0031410"],"is_obsolete":false,"name":"phagolysosome","secondary_identifiers":["Wikipedia:Phagolysosome"],"synonyms":[{"name":"late phagocytic vesicle","type":"related"},{"name":"late phagosome","type":"related"}],"termid":"GO:0032010"}


id: MONDO:0600005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An allergic disease involving venom.","definition_xrefs":["PMID:26154789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"venom allergy","secondary_identifiers":["UMLS:C4510560","MEDGEN:1387536"],"synonyms":[{"name":"IgE-mediated venom hypersensitivity","type":"exact"},{"name":"venom hypersensitivity","type":"exact"}],"termid":"MONDO:0600005","xrefs":{"Monarch":{"xref_id":"0600005"}}}


id: MONDO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deficiency","termid":"MONDO:0002211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunoglobulin beta deficiency","secondary_identifiers":["UMLS:C3502055","MESH:C567200","MEDGEN:502457","DOID:0060026"],"synonyms":[{"name":"IgB deficiency","type":"related"}],"termid":"MONDO:0000583","xrefs":{"Monarch":{"xref_id":"0000583"}}}


id: MONDO:0019052
data:
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id: PBO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase Lys3","termid":"PBO:0000430"}


id: MONDO:0021418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the ethmoid sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of ethmoidal sinus","secondary_identifiers":["NCIT:C3932","MEDGEN:82675","ICD9:471.8","SCTID:23966000","UMLS:C0264248"],"synonyms":[{"name":"ethmoid sinus polyp","type":"exact"},{"name":"ethmoidal polyp","type":"exact"},{"name":"ethmoidal sinus polyp","type":"exact"},{"name":"polyp of ethmoid sinus","type":"exact"},{"name":"polyp of the ethmoid sinus","type":"exact"},{"name":"polyp of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0021418","xrefs":{"Monarch":{"xref_id":"0021418"}}}


id: GO:0099103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Direct interaction with a channel (binding or modification), resulting in its opening. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"is_a","term_name":"transporter activator activity","termid":"GO:0141109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"channel activator activity","synonyms":[{"name":"channel gating activity","type":"exact"}],"termid":"GO:0099103"}


id: PBO:0029627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion","termid":"PBO:0029627"}


id: PBO:0056231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI1 antisense RNA 1","termid":"PBO:0056231"}


id: MONDO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that is induced by either chemical or radiation exposure.","gene_count":0,"genotype_count":0,"name":"obsolete radiation or chemically induced disorder (obsolete MONDO:0045028)","termid":"MONDO:0045028","xrefs":{"Monarch":{"xref_id":"0045028"}}}


id: PBO:0075020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-31","termid":"PBO:0075020"}


id: MONDO:0008035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular hypoplasia, congenital universal, of Krabbe","secondary_identifiers":["MEDGEN:320398","MESH:C563553","UMLS:C1834651","OMIM:159100"],"synonyms":[{"name":"muscular hypoplasia, congenital universal, of Krabbe","type":"exact"}],"termid":"MONDO:0008035","xrefs":{"Monarch":{"xref_id":"0008035"}}}


id: PBO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger splicing factor Bpb1","termid":"PBO:0005185"}


id: PBO:0029675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_aseptate_vegetative_cell","termid":"PBO:0029675"}


id: MONDO:0007040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acrocephalosyndactylia characterized by abnormalities in the bones of the legs, congenital heart defects and craniofacial defects and craniosynostosis. The patients suffer from cyanosis and other respiratory and breathing infections.","definition_xrefs":["Wikipedia:Sakati–Nyhan–Tisdale_syndrome","DOID:0060359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrocephalopolysyndactyly","termid":"MONDO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Sakati-Nyhan syndrome","secondary_identifiers":["GARD:115","MEDGEN:220889","MESH:C537227","Orphanet:3128","UMLS:C1275079","OMIM:101120","SCTID:403768004"],"synonyms":[{"name":"ACPS 3","type":"related"},{"name":"ACPS with leg hypoplasia","type":"exact"},{"name":"ACPS3","type":"related"},{"name":"Sakati syndrome","type":"related"},{"name":"Sakati-Nyhan syndrome","type":"exact"},{"name":"Sakati-Nyhan-Tisdale syndrome","type":"exact"},{"name":"acrocephalopolysyndactyly type 3","type":"exact"},{"name":"acrocephalopolysyndactyly type III","type":"exact"}],"termid":"MONDO:0007040","xrefs":{"Monarch":{"xref_id":"0007040"}}}


id: MONDO:0013371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PSEN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1U","secondary_identifiers":["MESH:C566296","OMIM:613694","MEDGEN:463620","GARD:15689","UMLS:C3160720","DOID:0110455"],"synonyms":[{"name":"CMD1U","type":"exact"},{"name":"PSEN1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1U","type":"related"},{"name":"cardiomyopathy, dilated, type 1U","type":"exact"},{"name":"dilated cardiomyopathy type 1U","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PSEN1","type":"exact"}],"termid":"MONDO:0013371","xrefs":{"Monarch":{"xref_id":"0013371"}}}


id: PBO:0110038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate dehydrogenase subunit 4","termid":"PBO:0110038"}


id: PBO:0059050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid cell nuclear differentiation antigen","termid":"PBO:0059050"}


id: GO:0008507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: iodide(out) + Na+(out) = iodide(in) + Na+(in).","definition_xrefs":["TC:2.A.21.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodide transmembrane transporter activity","termid":"GO:0015111"},{"relation_name":"is_a","term_name":"monoatomic anion:sodium symporter activity","termid":"GO:0015373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium:iodide symporter activity","secondary_identifiers":["Reactome:R-HSA-5658195","Reactome:R-HSA-429591"],"synonyms":[{"name":"sodium/iodide symporter activity","type":"exact"}],"termid":"GO:0008507"}


id: PBO:0029114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_process","termid":"PBO:0029114"}


id: PBO:0119965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein with signal peptide","termid":"PBO:0119965"}


id: GO:0071417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organonitrogen stimulus. An organonitrogen compound is formally a compound containing at least one carbon-nitrogen bond.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to organonitrogen compound (obsolete GO:0071417)","synonyms":[{"name":"cellular response to organic nitrogen","type":"exact"}],"termid":"GO:0071417"}


id: PBO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies4","termid":"PBO:0000634"}


id: GO:0150064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Early postnatal vertebrate developmental process, during which axons of retinal ganglion cells (RGCs), transmitting overlapping inputs from both eyes, segregate into distinct eye-specific non-overlapping regions in the dorsal lateral geniculate nucleus (dLGN) of the thalamus.","definition_xrefs":["PMID:22632727","PMID:29322522","GOC:aruk","PMID:16025107","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vertebrate eye-specific patterning","synonyms":[{"name":"binocular vision development","type":"related"},{"name":"eye-specific patterning","type":"broad"},{"name":"eye-specific segregation","type":"broad"},{"name":"vertebrate eye-specific segregation","type":"exact"}],"termid":"GO:0150064"}


id: PBO:0028113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_G418","termid":"PBO:0028113"}


id: PBO:0086725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene","termid":"PBO:0086725"}


id: GO:0060261
data:
  {"annotated_genes":["SJAG_00766","SJAG_03590","SJAG_04705","SJAG_03421","SJAG_00904","SJAG_01403","SJAG_03573","SJAG_00909","SJAG_01952","SJAG_04820","SJAG_03622","SJAG_05341","SJAG_00297","SJAG_02849","SJAG_00150","SJAG_02494","SJAG_02391","SJAG_04099","SJAG_00342","SJAG_04647","SJAG_05203","SJAG_01771","SJAG_02551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65332,89214,92138,92449,96111,96226,97163,97645,100457,100808,103751,105210,105469,107499,107854,108044,108181,110541,110568,116571,120800],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[91483,81264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: GO:1903865
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of sigma factor antagonist activity.","definition_xrefs":["PMID:23687042","GOC:bhm","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sigma factor antagonist complex","termid":"GO:1903865"}


id: PR:Q10225
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ankyrin repeat and BTB/POZ domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.04c","secondary_identifiers":["UniProtKB:Q10225"],"synonyms":[{"name":"Spom972h-ABTB1","type":"exact"}],"termid":"PR:Q10225"}


id: PBO:0069263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 519, pseudogene","termid":"PBO:0069263"}


id: PBO:0081687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 608","termid":"PBO:0081687"}


id: MONDO:0032891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial berry aneurysm","termid":"MONDO:0016483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm, intracranial berry, 12","secondary_identifiers":["OMIM:618734","UMLS:C5231484","GARD:18330","DOID:0080975","MEDGEN:1684660"],"synonyms":[{"name":"ANEURYSM, INTRACRANIAL BERRY, 12","type":"related"},{"name":"ANIB12","type":"related"}],"termid":"MONDO:0032891","xrefs":{"Monarch":{"xref_id":"0032891"}}}


id: PBO:0017532
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Release Factor","termid":"PBO:0017532"}


id: MONDO:0012988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the FGF8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kallmann syndrome","termid":"MONDO:0018800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 6 with or without anosmia","secondary_identifiers":["MESH:C567199","DOID:0090086","ICD10CM:E23.0","MEDGEN:765488","UMLS:C3552574","OMIM:612702","GARD:10774"],"synonyms":[{"name":"FGF8 hypogonadotropic hypogonadism","type":"exact"},{"name":"HH6","type":"related"},{"name":"KAL6","type":"narrow"},{"name":"Kallmann syndrome 6","type":"related"},{"name":"hypogonadotropic hypogonadism 6 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in FGF8","type":"exact"}],"termid":"MONDO:0012988","xrefs":{"Monarch":{"xref_id":"0012988"}}}


id: MONDO:0013120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 5","secondary_identifiers":["MESH:C567766","MEDGEN:414349","GARD:15611","OMIM:613080","UMLS:C2751317","DOID:0111776"],"synonyms":[{"name":"46,XY SEX reversal 5","type":"related"},{"name":"46,XY Sex reversal type 5","type":"exact"},{"name":"46,XY Sex reversal, Cbx2-related","type":"related"},{"name":"46,XY gonadal dysgenesis, complete, Cbx2-related","type":"related"},{"name":"46,XY sex reversal 5","type":"exact"},{"name":"46XY sex reversal 5","type":"exact"},{"name":"SRXY5","type":"related"},{"name":"Sex reversal, XY, Cbx2-related","type":"related"},{"name":"disorder of Sex development, 46,XY, Cbx2-related","type":"related"}],"termid":"MONDO:0013120","xrefs":{"Monarch":{"xref_id":"0013120"}}}


id: GO:1903770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of beta-galactosidase activity.","definition_xrefs":["GOC:BHF","GO_REF:0000059","GOC:nc","GOC:TermGenie","PMID:11927518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of beta-galactosidase activity","synonyms":[{"name":"down regulation of S 2107","type":"related"},{"name":"down regulation of beta-D-galactanase activity","type":"exact"},{"name":"down regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"down regulation of beta-D-lactosidase activity","type":"exact"},{"name":"down regulation of beta-galactosidase activity","type":"exact"},{"name":"down regulation of beta-lactosidase activity","type":"exact"},{"name":"down regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"down regulation of hydrolact","type":"related"},{"name":"down regulation of lactose hydrolysis","type":"related"},{"name":"down regulation of lactozym","type":"related"},{"name":"down regulation of maxilact","type":"related"},{"name":"down regulation of oryzatym","type":"related"},{"name":"down regulation of sumiklat","type":"related"},{"name":"down regulation of trilactase activity","type":"exact"},{"name":"down-regulation of S 2107","type":"related"},{"name":"down-regulation of beta-D-galactanase activity","type":"exact"},{"name":"down-regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"down-regulation of beta-D-lactosidase activity","type":"exact"},{"name":"down-regulation of beta-galactosidase activity","type":"exact"},{"name":"down-regulation of beta-lactosidase activity","type":"exact"},{"name":"down-regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"down-regulation of hydrolact","type":"related"},{"name":"down-regulation of lactose hydrolysis","type":"related"},{"name":"down-regulation of lactozym","type":"related"},{"name":"down-regulation of maxilact","type":"related"},{"name":"down-regulation of oryzatym","type":"related"},{"name":"down-regulation of sumiklat","type":"related"},{"name":"down-regulation of trilactase activity","type":"exact"},{"name":"downregulation of S 2107","type":"related"},{"name":"downregulation of beta-D-galactanase activity","type":"exact"},{"name":"downregulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"downregulation of beta-D-lactosidase activity","type":"exact"},{"name":"downregulation of beta-galactosidase activity","type":"exact"},{"name":"downregulation of beta-lactosidase activity","type":"exact"},{"name":"downregulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"downregulation of hydrolact","type":"related"},{"name":"downregulation of lactose hydrolysis","type":"related"},{"name":"downregulation of lactozym","type":"related"},{"name":"downregulation of maxilact","type":"related"},{"name":"downregulation of oryzatym","type":"related"},{"name":"downregulation of sumiklat","type":"related"},{"name":"downregulation of trilactase activity","type":"exact"},{"name":"inhibition of S 2107","type":"related"},{"name":"inhibition of beta-D-galactanase activity","type":"narrow"},{"name":"inhibition of beta-D-galactoside galactohydrolase activity","type":"narrow"},{"name":"inhibition of beta-D-lactosidase activity","type":"narrow"},{"name":"inhibition of beta-galactosidase activity","type":"narrow"},{"name":"inhibition of beta-lactosidase activity","type":"narrow"},{"name":"inhibition of exo-(1->4)-beta-D-galactanase activity","type":"narrow"},{"name":"inhibition of hydrolact","type":"related"},{"name":"inhibition of lactose hydrolysis","type":"related"},{"name":"inhibition of lactozym","type":"related"},{"name":"inhibition of maxilact","type":"related"},{"name":"inhibition of oryzatym","type":"related"},{"name":"inhibition of sumiklat","type":"related"},{"name":"inhibition of trilactase activity","type":"narrow"},{"name":"negative regulation of S 2107","type":"related"},{"name":"negative regulation of beta-D-galactanase activity","type":"exact"},{"name":"negative regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"negative regulation of beta-D-lactosidase activity","type":"exact"},{"name":"negative regulation of beta-lactosidase activity","type":"exact"},{"name":"negative regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"negative regulation of hydrolact","type":"related"},{"name":"negative regulation of lactose hydrolysis","type":"related"},{"name":"negative regulation of lactozym","type":"related"},{"name":"negative regulation of maxilact","type":"related"},{"name":"negative regulation of oryzatym","type":"related"},{"name":"negative regulation of sumiklat","type":"related"},{"name":"negative regulation of trilactase activity","type":"exact"}],"termid":"GO:1903770"}


id: GO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, the paranode region of an axon.","definition_xrefs":["PMID:18803321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to axon","termid":"GO:0099612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to paranode region of axon","synonyms":[{"name":"protein localisation to paranode region of axon","type":"exact"}],"termid":"GO:0002175"}


id: MONDO:1012155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, domestic cat","secondary_identifiers":["OMIA:000631-9685"],"termid":"MONDO:1012155","xrefs":{"Monarch":{"xref_id":"1012155"}}}


id: GO:0050169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptide tryptophan + O2 = peptide formylkynurenine.","definition_xrefs":["PMID:4403729"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide-tryptophan 2,3-dioxygenase activity (obsolete GO:0050169)","termid":"GO:0050169"}


id: MONDO:1012224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive cerebellar abiotrophy, non-human animal","termid":"MONDO:1011857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive cerebellar abiotrophy, pig","secondary_identifiers":["OMIA:000826-9823"],"termid":"MONDO:1012224","xrefs":{"Monarch":{"xref_id":"1012224"}}}


id: PBO:0054331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1724","termid":"PBO:0054331"}


id: MONDO:0010028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialuria is an extremely rare metabolic disorder described in fewer than 10 patients to date and characterized by variable signs and symptoms, mostly in infancy, including transient failure to thrive, slightly prolonged neonatal jaundice, equivocal or mild hepatomegaly, microcytic anemia, frequent upper respiratory infections, gastroenteritis, dehydration and flat and coarse facies. Learning difficulties and seizures may occur in childhood.","definition_xrefs":["Orphanet:3166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of sialic acid metabolism","termid":"MONDO:0017736"},{"relation_name":"is_a","term_name":"free sialic acid storage disease","termid":"MONDO:0019366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"sialuria","secondary_identifiers":["icd11.foundation:154329034","ICD9:796.4","MEDGEN:137980","UMLS:C0342853","SCTID:238051008","OMIM:269921","GARD:4865","DOID:3659","MedDRA:10067529"],"synonyms":[{"name":"sialuria","type":"exact"},{"name":"sialuria, French type","type":"exact"}],"termid":"MONDO:0010028","xrefs":{"Monarch":{"xref_id":"0010028"}}}


id: SO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TCS element is a (yeast) transcription factor binding site, bound by the TEA DNA binding domain (DBD) of transcription factors. The consensus site is CATTCC or CATTCT.","definition_xrefs":["PMID:20118212","SO:ke","PMID:1489142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCS_element","synonyms":[{"name":"TCS element","type":"exact"},{"name":"TEA Consensus Sequence ","type":"exact"}],"termid":"SO:0002044"}


id: PBO:0072312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 9","termid":"PBO:0072312"}


id: MOD:01963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine.","definition_xrefs":["PubMed:23030644","RESID:AA0607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-4-[(2,4-diacetamido-2,4,6-trideoxy-beta-D-glucopyranosyl)oxy]propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (DATDGlc) serine","type":"exact"},{"name":"DABA","type":"exact"},{"name":"DATDH","type":"exact"},{"name":"DiNAcBac","type":"exact"},{"name":"O-(2,4-diacetamido-2,4,6-trideoxy-D-glucosyl)-L-serine","type":"exact"},{"name":"O-[2,4-bis(acetylamino)-2,4,6-trideoxy-beta-D-glucopyranosyl]-L-serine","type":"exact"},{"name":"O-[N,N-diacetylbacillosaminyl]serine","type":"exact"},{"name":"O-[N2,N4-diacetylbacillosaminyl]serine","type":"exact"}],"termid":"MOD:01963"}


id: PR:O42888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aldo-keto reductase family 1 member E1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C8E4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.04","secondary_identifiers":["UniProtKB:O42888"],"synonyms":[{"name":"Spom972h-Akr1e1","type":"exact"}],"termid":"PR:O42888"}


id: PR:O42910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.03c","synonyms":[{"name":"Spom972h-ppr7","type":"exact"}],"termid":"PR:O42910"}


id: FYPO:0007937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of DNA breakpoint junctions is greater than normal during stationary phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions during stationary phase","termid":"FYPO:0007937"}


id: GO:0017012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phytochromobilin to phycocyanin or allophycocyanin.","definition_xrefs":["RESID:AA0133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phytochromobilin linkage","termid":"GO:0017012"}


id: PBO:0084086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for Gpa1p; amplifies G protein signaling; functions as a chaperone under ATP-depleted oxidative stress conditions; subunit of GET complex, involved in ATP dependent Golgi to ER trafficking and insertion of tail-anchored (TA) proteins into ER membrane under non-stress conditions; binds as dimer to transmembrane domain (TMD) cargo, shielding TMDs from aqueous solvent; protein abundance increases under DNA replication stress","termid":"PBO:0084086"}


id: PBO:0004012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase family protein (predicted)","termid":"PBO:0004012"}


id: PBO:0070849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene","termid":"PBO:0070849"}


id: PATO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's participation in movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"movement quality","termid":"PATO:0001906"}


id: GO:0099008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into the cytoplasm of a host cell, following fusion with the outer membrane, via permeabilization of the plasma (inner) membrane. This process mediates the entry of some non-enveloped viruses into prokaryotic cells. In the case of some double stranded RNA viruses of prokaryotes this occurs via interaction of a membrane-interacting component of the capsid, leading to depolarization and permeabilization of the plasma membrane.","definition_xrefs":["PMID:20427561","PMID:15795287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of inner membrane","synonyms":[{"name":"viral entry via permeabilization of inner membrane","type":"narrow"}],"termid":"GO:0099008"}


id: FYPO:0007227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal in centromeric regions.","definition_xrefs":["PomBase:mah","PMID:31822915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of R-loops","termid":"FYPO:0007901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of R-loops at centromere","synonyms":[{"name":"increased RNA-DNA hybrid level at centromere","type":"exact"},{"name":"increased level of DNA:RNA hybrids at centromere","type":"exact"},{"name":"increased level of RNA-DNA hybrids at centromere","type":"exact"},{"name":"increased level of RNA-DNA hybrids at centromere during mitotic cell cycle","type":"related"},{"name":"increased level of RNA-DNA hybrids at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007227"}


id: PBO:0070030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1327, pseudogene","termid":"PBO:0070030"}


id: PBO:0120006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 63, pseudogene","termid":"PBO:0120006"}


id: MONDO:0200001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromate resistance (obsolete MONDO:0200001)","secondary_identifiers":["OMIM:118840"],"synonyms":[{"name":"CHR","type":"related"},{"name":"CHROMATE RESISTANCE","type":"related"}],"termid":"MONDO:0200001","xrefs":{"Monarch":{"xref_id":"0200001"}}}


id: GO:0042455
data:
  {"annotated_genes":["SJAG_03881","SJAG_06634","SJAG_00044","SJAG_03096","SJAG_00134","SJAG_01070","SJAG_01859","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[118682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[71590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[67824,62491,95532,75121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[75007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any ribonucleoside, a nucleoside in which purine or pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside anabolism","type":"exact"},{"name":"ribonucleoside biosynthesis","type":"exact"},{"name":"ribonucleoside formation","type":"exact"},{"name":"ribonucleoside synthesis","type":"exact"}],"termid":"GO:0042455","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null,"GO:0046132":null}}


id: MONDO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ataxia-oculomotor apraxia (obsolete MONDO:0000196)","termid":"MONDO:0000196","xrefs":{"Monarch":{"xref_id":"0000196"}}}


id: MONDO:0956985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A connective tissue cancer that has material basis in LMNA-NTRK1 gene fusion.","definition_xrefs":["DOID:0080894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipofibromatosis-like neural tumor","termid":"MONDO:0956985","xrefs":{"Monarch":{"xref_id":"0956985"}}}


id: PBO:0042145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 4 like 1","termid":"PBO:0042145"}


id: MONDO:1012342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cysts, non-human animal","termid":"MONDO:1011913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal cysts, pig","secondary_identifiers":["OMIA:001257-9823"],"termid":"MONDO:1012342","xrefs":{"Monarch":{"xref_id":"1012342"}}}


id: PATO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"increased rate","termid":"PATO:0000912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency","synonyms":[{"name":"frequent","type":"related"},{"name":"high frequency","type":"exact"}],"termid":"PATO:0000380"}


id: GO:0039647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host poly(A)-binding protein (PABP) activity. PABP binds to the poly(A) tail of mRNA to facilitate translation.","definition_xrefs":["UniProtKB-KW:KW-1101"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host poly(A)-binding protein activity (obsolete GO:0039647)","synonyms":[{"name":"inhibition of host poly(A)-binding protein by virus","type":"exact"},{"name":"suppression by virus of host PABP activity","type":"exact"}],"termid":"GO:0039647"}


id: PBO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein","termid":"PBO:0001527"}


id: PBO:0063095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARD3 divergent transcript","termid":"PBO:0063095"}


id: GO:0035306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of removal of phosphate groups from a molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"positively_regulates","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dephosphorylation","synonyms":[{"name":"activation of dephosphorylation","type":"narrow"},{"name":"stimulation of dephosphorylation","type":"narrow"},{"name":"up regulation of dephosphorylation","type":"exact"},{"name":"up-regulation of dephosphorylation","type":"exact"},{"name":"upregulation of dephosphorylation","type":"exact"}],"termid":"GO:0035306"}


id: FYPO:0007835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which histone binding by a gene product (usually a protein) in a mutant occurs to a greater extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:31837996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"},{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"increased histone binding","synonyms":[{"name":"increased protein-histone interaction","type":"exact"}],"termid":"FYPO:0007835"}


id: PBO:0061973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AL member 1 pseudogene","termid":"PBO:0061973"}


id: GO:1990520
data:
  {"annotated_genes":["SJAG_02542","SJAG_00460"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105074,119422],"is_not":false,"summary":null,"term":"GO:1990520"}]},"cv_name":"cellular_component","definition":"A protein complex that includes separase (a protease which cleaves cohesin as part of chromosome separation) and securin, a protease inhibitor. Chromosome separation is inhibited until securin is degraded by the Anaphase Promoting Complex (APC).","definition_xrefs":["GOC:vw","PMID:8978688","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_02542":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"separase-securin complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cut1-2 complex","type":"exact"}],"termid":"GO:1990520","terms_by_termid":{"GO:1990520":null}}


id: PBO:0064325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleiotropic regulator 1","termid":"PBO:0064325"}


id: PBO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 5","termid":"PBO:0061274"}


id: PBO:0081637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 565","termid":"PBO:0081637"}


id: MONDO:0010229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital condition characterized by the absence of hair on the scalp or entire body. The lack of hair is rarely absolute and is usually accompanied by incompletely grown, lanugo-like hair. It affects males twice as much as females and a familial tendency is common.","definition_xrefs":["NCIT:C35790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"alopecia totalis","termid":"MONDO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia, congenital","secondary_identifiers":["MEDGEN:78581","SCTID:2965006","UMLS:C0265992","GARD:1470","ICD10CM:Q84.0","OMIM:300042","MESH:C535981"],"synonyms":[{"name":"ALPC","type":"related"},{"name":"alopecia, congenital","type":"exact"},{"name":"congenital alopecia","type":"exact"}],"termid":"MONDO:0010229","xrefs":{"Monarch":{"xref_id":"0010229"}}}


id: MONDO:1010139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrichia with papular lesions that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"skin appendage disorder, non-human animal","termid":"MONDO:1011358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrichia with papular lesions, non-human animal","secondary_identifiers":["OMIA:001348"],"termid":"MONDO:1010139","xrefs":{"Monarch":{"xref_id":"1010139"}}}


id: GO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.","definition_xrefs":["RESID:AA0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid carboxylation","secondary_identifiers":["Reactome:R-HSA-159854"],"termid":"GO:0017187"}


id: GO:1902721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prolactin secretion.","definition_xrefs":["GOC:TermGenie","PMID:16159377","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"prolactin secretion","termid":"GO:0070459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of prolactin secretion","synonyms":[{"name":"down regulation of prolactin secretion","type":"exact"},{"name":"down-regulation of prolactin secretion","type":"exact"},{"name":"downregulation of prolactin secretion","type":"exact"},{"name":"inhibition of prolactin secretion","type":"narrow"}],"termid":"GO:1902721"}


id: PBO:0064530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G pseudogene 2","termid":"PBO:0064530"}


id: MONDO:0022916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cystic hygroma lethal cleft palate (obsolete MONDO:0022916)","synonyms":[{"name":"Cowchock Wapner Kurtz syndrome","type":"related"}],"termid":"MONDO:0022916","xrefs":{"Monarch":{"xref_id":"0022916"}}}


id: GO:1904983
data:
  {"annotated_genes":["SJAG_00626","SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71751,100006],"is_not":false,"summary":null,"term":"GO:1904983"}]},"cv_name":"biological_process","definition":"The process in which glycine is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["GO_REF:0000078","GOC:TermGenie","PMID:26821380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"glycine transport","termid":"GO:0015816"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glycine import into mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"transmembrane glycine transport from cytosol to mitochondrion","type":"exact"}],"termid":"GO:1904983","terms_by_termid":{"GO:1904983":null}}


id: PBO:0042799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 295","termid":"PBO:0042799"}


id: GO:0015658
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104602,111853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of branched-chain amino acids from one side of a membrane to the other. Branched-chain amino acids are amino acids with a branched carbon skeleton without rings.","definition_xrefs":["GOC:ai","GOC:bf","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"branched-chain amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9672770","GO:1901240"],"synonyms":[{"name":"branched-chain aliphatic amino acid transmembrane transporter activity","type":"exact"},{"name":"branched-chain aliphatic amino acid transporter activity","type":"exact"},{"name":"leucine/valine/isoleucine permease activity","type":"related"},{"name":"valine/tyrosine/tryptophan permease activity","type":"related"}],"termid":"GO:0015658","terms_by_termid":{"GO:0015188":null}}


id: MONDO:0032859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 40","secondary_identifiers":["GARD:18411","OMIM:618664","DOID:0111918","MEDGEN:1684662","UMLS:C5231451"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 40","type":"related"},{"name":"SPGF40","type":"related"}],"termid":"MONDO:0032859","xrefs":{"Monarch":{"xref_id":"0032859"}}}


id: GO:0070426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"positive regulation of NOD signaling pathway","type":"narrow"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070426"}


id: GO:0042790
data:
  {"annotated_genes":["SJAG_03578","SJAG_02070","SJAG_02653","SJAG_02813","SJAG_01313","SJAG_02747","SJAG_01128","SJAG_00731","SJAG_02871","SJAG_00692","SJAG_01698","SJAG_03144","SJAG_02101","SJAG_00202","SJAG_04261","SJAG_01562","SJAG_04766","SJAG_03956","SJAG_04106","SJAG_01765","SJAG_01444","SJAG_00139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60013,77408,80873,80935,81566],"is_not":false,"summary":null,"term":"GO:0042790"},{"annotations":[96995,65153,105139,116057,76869,58377,79185,71782,106691,117370,76221,62772,107599,69125,93811,64991,66086],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The synthesis of the large ribosomal RNA (rRNA) transcript which encodes several rRNAs, e.g. in mammals 28S, 18S and 5.8S, from a nuclear DNA template transcribed by RNA polymerase I.","definition_xrefs":["GOC:jl","ISBN:0321000382","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"},{"relation_name":"is_a","term_name":"rRNA transcription","termid":"GO:0009303"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00202":null,"SJAG_00692":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null,"SJAG_04766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"nucleolar large rRNA transcription by RNA polymerase I","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"transcription of nucleolar large rRNA by RNA polymerase I","type":"exact"}],"termid":"GO:0042790","terms_by_termid":{"GO:0006362":null,"GO:0042790":null}}


id: GO:1902385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycyrrhetinate.","definition_xrefs":["PMID:22128119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid catabolic process","termid":"GO:0019741"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"glycyrrhetinate metabolic process","termid":"GO:1902384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycyrrhetinate catabolic process","synonyms":[{"name":"glycyrrhetinate breakdown","type":"exact"},{"name":"glycyrrhetinate catabolism","type":"exact"},{"name":"glycyrrhetinate degradation","type":"exact"}],"termid":"GO:1902385"}


id: FYPO:0004678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased polyadenylated 25S rRNA level","synonyms":[{"name":"increased mature polyadenylated 25S rRNA transcript level","type":"exact"},{"name":"increased polyadenylated 25S rRNA accumulation","type":"related"},{"name":"increased polyadenylated 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased polyadenylated 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased polyadenylated 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0004678"}


id: GO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"positively_regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of kinin cascade","synonyms":[{"name":"activation of kinin cascade","type":"narrow"},{"name":"stimulation of kinin cascade","type":"narrow"},{"name":"up regulation of kinin cascade","type":"exact"},{"name":"up-regulation of kinin cascade","type":"exact"},{"name":"upregulation of kinin cascade","type":"exact"}],"termid":"GO:0002258"}


id: MOD:00393
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydroxyl group hydrogen with a methyl group to produce either an ether from an alcohol or an ester from an acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"O-methylated residue","synonyms":[{"name":"OMeRes","type":"exact"}],"termid":"MOD:00393"}


id: PBO:0063478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 6","termid":"PBO:0063478"}


id: PBO:0071023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 25","termid":"PBO:0071023"}


id: FYPO:0003922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic tRNA transcription unit occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased replication fork arrest at tRNA locus","synonyms":[{"name":"increased replication fork arrest at tRNA genes","type":"exact"},{"name":"increased replication fork arrest at tRNA locus during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at tRNA locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003922"}


id: PR:Q9UTR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- och1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiation-specific alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.05c","synonyms":[{"name":"Spom972h-och1","type":"exact"}],"termid":"PR:Q9UTR6"}


id: PR:P32747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroorotate dehydrogenase (quinone), mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11938:SF7","OMA:SCHPO00561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone), mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.12c","secondary_identifiers":["UniProtKB:P32747"],"synonyms":[{"name":"DHOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHODase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DHOdehase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DHODH","type":"exact"},{"name":"dihydroorotate oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32747"}


id: PATO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000517 abiotic stress sensitivity value (obsolete PATO:0000517)","termid":"PATO:0000517"}


id: PBO:0082338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant","termid":"PBO:0082338"}


id: GO:0072684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Endonucleolytic cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA in the mitochondrion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tRNA 3'-trailer cleavage, endonucleolytic (obsolete GO:0072684)","synonyms":[{"name":"mitochondrial endonucleolytic tRNA 3'-end cleavage","type":"exact"},{"name":"mitochondrial endonucleolytic tRNA 3'-trailer cleavage","type":"related"},{"name":"mitochondrial tRNA 3'-end cleavage, endonucleolytic","type":"exact"}],"termid":"GO:0072684"}


id: MONDO:0002894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the spine. It is characterized by a lobulated growth pattern, myxoid stroma formation, and the presence of physaliphorous cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chordoma","termid":"MONDO:0008978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal chordoma","secondary_identifiers":["EFO:1000543","DOID:4153","MEDGEN:347800","NCIT:C5156","UMLS:C1859101"],"synonyms":[{"name":"chordoma of spinal column","type":"exact"},{"name":"chordoma of spine","type":"exact"},{"name":"chordoma of the spinal column","type":"exact"},{"name":"spinal Chordomas","type":"exact"},{"name":"spinal chordoma","type":"exact"},{"name":"spinal column chordoma","type":"exact"}],"termid":"MONDO:0002894","xrefs":{"Monarch":{"xref_id":"0002894"}}}


id: PBO:0042686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEBPZ opposite strand","termid":"PBO:0042686"}


id: PBO:0031782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cytokinesis","termid":"PBO:0031782"}


id: GO:2000934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"negatively_regulates","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellotriose metabolic process","synonyms":[{"name":"negative regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000934"}


id: PR:O13290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic dynein 1 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01915","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.06c","secondary_identifiers":["UniProtKB:O13290"],"synonyms":[{"name":"DYHC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DYNC1H1","type":"exact"},{"name":"dynein heavy chain, cytosolic (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13290"}


id: GO:0097705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to pulsatile fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:21768538","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to pulsatile fluid shear stress","termid":"GO:0097703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to pulsatile fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to pulsatile fluid shear stress","type":"exact"}],"termid":"GO:0097705"}


id: FYPO:0005749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during glucose starvation","synonyms":[{"name":"decreased protein phosphorylation during glucose depletion","type":"exact"},{"name":"decreased protein phosphorylation during glucose deprivation","type":"exact"},{"name":"decreased protein phosphorylation during glucose limitation","type":"related"},{"name":"reduced protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0005749"}


id: MONDO:0011307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in an autosomal dominant mutation of SCZD2 on chromosome 11q14-q21.","definition_xrefs":["DOID:0070078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 2","secondary_identifiers":["MEDGEN:350323","OMIM:603342","UMLS:C1864010"],"synonyms":[{"name":"SCZD2","type":"exact"},{"name":"schizophrenia 2","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 11Q-related","type":"related"}],"termid":"MONDO:0011307","xrefs":{"Monarch":{"xref_id":"0011307"}}}


id: PBO:0086543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR085W is not an essential gene","termid":"PBO:0086543"}


id: MONDO:0015672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diprosopus is a rare, life-threatening developmental defect during embryogenesis, and a subtype of conjoined twins, characterized by partial or complete duplication of the facial structures on a single head, neck, trunk and body. It may be associated with congenital anomalies involving the central nervous, cardiovascular, gastrointestinal and respiratory systems. Cleft lip and palate have been reported in rare cases.","definition_xrefs":["Orphanet:1681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diprosopus","secondary_identifiers":["GARD:1876","MEDGEN:540123","SCTID:62192003","UMLS:C0266731"],"synonyms":[{"name":"Diprosopia","type":"exact"},{"name":"craniofacial duplication","type":"exact"}],"termid":"MONDO:0015672","xrefs":{"Monarch":{"xref_id":"0015672"}}}


id: MONDO:0007479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, Levi type","secondary_identifiers":["UMLS:C1851994","MEDGEN:338837","MESH:C565081","OMIM:127100"],"synonyms":[{"name":"dwarfism Levi type","type":"related"},{"name":"dwarfism Levi's type","type":"related"},{"name":"dwarfism, Levi type","type":"exact"},{"name":"snub-nosed type of dwarfism","type":"related"}],"termid":"MONDO:0007479","xrefs":{"Monarch":{"xref_id":"0007479"}}}


id: MONDO:0957240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 24","secondary_identifiers":["OMIM:620342","MEDGEN:1841082","UMLS:C5830446","DOID:0081449"],"termid":"MONDO:0957240","xrefs":{"Monarch":{"xref_id":"0957240"}}}


id: MONDO:1012356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"growth-hormone-receptor deficiency dwarfism, non-human animal","termid":"MONDO:1011956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth-hormone-receptor deficiency dwarfism, cattle","secondary_identifiers":["OMIA:001294-9913"],"termid":"MONDO:1012356","xrefs":{"Monarch":{"xref_id":"1012356"}}}


id: PBO:0059392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S25 pseudogene 1","termid":"PBO:0059392"}


id: FYPO:0006715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"large and small daughter nuclei","synonyms":[{"name":"large and small daughter nuclei during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0006715"}


id: PBO:0039345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aly/REF export factor","termid":"PBO:0039345"}


id: FYPO:0008392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H4 measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:39878217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal level of histone H4 in cell","termid":"FYPO:0008392"}


id: FYPO:0006849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of RNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased total RNA level during vegetative growth","synonyms":[{"name":"increased total RNA accumulation during vegetative growth","type":"related"},{"name":"increased total RNA content during vegetative growth","type":"exact"},{"name":"increased total RNA level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006849"}


id: PBO:0053152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 1","termid":"PBO:0053152"}


id: GO:0002917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"peripheral B cell anergy","termid":"GO:0002453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral B cell anergy","termid":"GO:0002917"}


id: MONDO:0100084
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008070"},{"annotations":[87532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014800"}]},"cv_name":"mondo","definition":"A musculoskeletal system disorder that covers a wide spectrum of phenotypes and is caused by pathogenic variants in the skeletal muscle α-actin gene (ACTA1). These variants lead to a variety of overlapping adult onset and congenital myopathies characterized by muscle weakness, hypotonia, myopathic face, respiratory dysfunction, and rarely cardiac involvement. Specific skeletal muscle structural lesions visible on muscle biopsy include actin accumulations, nemaline and intranuclear bodies, fiber-type disproportion, cores, caps, dystrophic features and zebra bodies. Disorders associated with ACTA1 pathogenic variants can have autosomal dominant (90%) or recessive (10%) inheritance.","definition_xrefs":["PMID:22825594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"alpha-actinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"ACTA1 disease","type":"exact"},{"name":"actin myopathy","type":"broad"},{"name":"actinopathy","type":"broad"},{"name":"alpha actinopathy","type":"exact"},{"name":"alpha-actinopathy","type":"exact"}],"termid":"MONDO:0100084","terms_by_termid":{"MONDO:0008070":null,"MONDO:0014800":null},"xrefs":{"Monarch":{"xref_id":"0100084"}}}


id: FYPO:0000887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000874"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000887"}


id: MOD:01346
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-hexosyl-L-asparagine.","definition_xrefs":["PubMed:11112526","PubMed:6540775","Unimod:41#N","PubMed:11567090","PubMed:15279557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-hexosylated asparagine","synonyms":[{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"}],"termid":"MOD:01346"}


id: MOD:00422
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a morpholine-2-acetyl group.","definition_xrefs":["Unimod:29#N-term","PubMed:10446193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"},{"relation_name":"is_a","term_name":"morpholine-2-acetylated residue","termid":"MOD:01813"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino morpholine-2-acetylated residue","synonyms":[{"name":"N-Succinimidyl-2-morpholine acetate","type":"related"},{"name":"N-succinimidylmorpholine-2-acetate alpha-amino derivative","type":"exact"},{"name":"SMA","type":"related"}],"termid":"MOD:00422"}


id: GO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the dorsal motor nucleus of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve structural organization","synonyms":[{"name":"dorsal motor nucleus of vagus nerve structural organisation","type":"exact"}],"termid":"GO:0035763"}


id: FYPO:0007616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diuron. Cells stop growing (and may die) at a concentration of diuron that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to diuron","synonyms":[{"name":"sensitive to 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"sensitive to DCMU","type":"exact"},{"name":"sensitive to diuron during mitotic cell cycle","type":"related"},{"name":"sensitive to diuron during vegetative growth","type":"exact"}],"termid":"FYPO:0007616"}


id: PBO:0087156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAH-box family; functions in both RNA polymerase I and polymerase II transcript metabolism; catalyzes removal of U2, U5, and U6 snRNPs from the postsplicing lariat-intron ribonucleoprotein complex; required for efficient biogenesis of both small- and large-subunit rRNAs; acts with Sqs1p to promote 20S to 18S rRNA processing catalyzed by endonuclease Nob1p","termid":"PBO:0087156"}


id: GO:0052647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentitol phosphates, any phosphorylated alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentitol phosphate metabolic process","synonyms":[{"name":"pentitol phosphate metabolism","type":"exact"}],"termid":"GO:0052647"}


id: FYPO:0006883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which exocytosis occurs to a lower extent than normal at the cell division site.","definition_xrefs":["PMID:30044717","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased exocytosis during vegetative growth","termid":"FYPO:0004572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased exocytosis at cell division site","synonyms":[{"name":"decreased exocytosis at cell division site during mitotic cell cycle","type":"related"},{"name":"decreased exocytosis at cell division site during vegetative growth","type":"exact"},{"name":"reduced exocytosis at cell division site","type":"exact"}],"termid":"FYPO:0006883"}


id: PBO:0116846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational activator Sls1","termid":"PBO:0116846"}


id: PBO:0086357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 2-methylcitrate dehydratase; mitochondrial protein that participates in respiration; induced by diauxic shift; homologous to E. coli PrpD, may take part in the conversion of 2-methylcitrate to 2-methylisocitrate","termid":"PBO:0086357"}


id: PBO:0117433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 24","termid":"PBO:0117433"}


id: GO:1990451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in the homeostasis of organismal or cellular pH (with pH < 7). pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:go_curators","GOC:rl","PMID:10615049","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to acidic pH","termid":"GO:0071468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular stress response to acidic pH","synonyms":[{"name":"cellular stress response to acidity","type":"broad"}],"termid":"GO:1990451"}


id: GO:0060651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland bud epithelial cell proliferation that results in the elongation of the bud.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mammary gland epithelial cell proliferation","termid":"GO:0033599"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in mammary gland bud elongation","termid":"GO:0060651"}


id: PBO:0083850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp45p (PM/SCL-75, EXOSC9); protein abundance increases in response to DNA replication stress","termid":"PBO:0083850"}


id: PBO:0082648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of serine palmitoyltransferase; responsible along with Lcb2p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine","termid":"PBO:0082648"}


id: GO:1990478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultrasonic stimulus.","definition_xrefs":["PMID:20950932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ultrasound","termid":"GO:1990478"}


id: MONDO:0015201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare developmental defect during embryogenesis malformation syndrome characterized by bands of extensile tissue connecting the margins of the upper and lower eyelids, in association with anal atresia. Patients may additionally present cleft palate, hydrocephalus and meningomyelocele. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:1074"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyloblepharon filiforme-imperforate anus syndrome","secondary_identifiers":["GARD:697","MEDGEN:1666000","UMLS:C4751231"],"synonyms":[{"name":"Aughton-Hufnagle syndrome","type":"exact"},{"name":"ankyloblepharon filiforme adnatum-imperforate anus syndrome","type":"related"}],"termid":"MONDO:0015201","xrefs":{"Monarch":{"xref_id":"0015201"}}}


id: GO:1990223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the cytokinin levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24124900"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of cytokinin levels in host (obsolete GO:1990223)","termid":"GO:1990223"}


id: GO:1900851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pseurotin A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of pseurotin A biosynthetic process","termid":"GO:1900849"},{"relation_name":"positively_regulates","term_name":"pseurotin A biosynthetic process","termid":"GO:1900790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of pseurotin A biosynthetic process","synonyms":[{"name":"up regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"up-regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"upregulation of pseurotin A biosynthetic process","type":"exact"}],"termid":"GO:1900851"}


id: PBO:0059236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L9 pseudogene 1","termid":"PBO:0059236"}


id: PBO:0038792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase domain containing 2","termid":"PBO:0038792"}


id: PBO:0045212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5 gamma","termid":"PBO:0045212"}


id: MONDO:0007823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete insulin receptors, familial increase 1N (obsolete MONDO:0007823)","secondary_identifiers":["OMIM:147320"],"synonyms":[{"name":"insulin receptors, familial increase IN","type":"related"},{"name":"insulin receptors, familial increase type 1N","type":"exact"}],"termid":"MONDO:0007823","xrefs":{"Monarch":{"xref_id":"0007823"}}}


id: MONDO:0035540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neuroendocrine tumor arising from chromaffin cells of the adrenal medulla (pheochromocytoma) or from sympathetic and parasympathetic ganglia (paraganglioma). These tumors are most often benign and may produce catecholamines in excess causing hypertension and sometimes severe acute cardiovascular complications.","definition_xrefs":["Orphanet:573163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma-paraganglioma","secondary_identifiers":["MEDGEN:1826130","UMLS:C5681712","GARD:22315"],"termid":"MONDO:0035540","xrefs":{"Monarch":{"xref_id":"0035540"}}}


id: PBO:0059376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 1","termid":"PBO:0059376"}


id: GO:0018499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-2,3-dihydrodiol DDT + NADP+ = NADPH + 2,3-dihydroxy DDT.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-2,3-dihydrodiol DDT dehydrogenase activity (obsolete GO:0018499)","termid":"GO:0018499"}


id: FYPO:0002948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the fungal-type cell wall is delaminated, i.e. one or more of its layers peels off.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delaminated cell wall","synonyms":[{"name":"delaminate cell wall","type":"exact"}],"termid":"FYPO:0002948"}


id: PBO:0051112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-68 (pseudogene)","termid":"PBO:0051112"}


id: PBO:0042129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical carcinoma expressed PCNA regulatory lncRNA","termid":"PBO:0042129"}


id: GO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:ha","PMID:27689881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of entry into reproductive diapause","termid":"GO:0061963"}


id: PBO:0051544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 cytokine family signal transducer","termid":"PBO:0051544"}


id: GO:0005942
data:
  {"annotated_genes":["SJAG_04860","SJAG_00114","SJAG_02699","SJAG_03403","SJAG_01876","SJAG_04552"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78459,78974,113350,73243,96400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034271"},{"annotations":[78975,73244,107517,78460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A protein complex capable of phosphatidylinositol 3-kinase activity and containing subunits of any phosphatidylinositol 3-kinase (PI3K) enzyme. These complexes are divided in three classes (called I, II and III) that differ for their presence across taxonomic groups and for the type of their constituents. Catalytic subunits of phosphatidylinositol 3-kinase enzymes are present in all 3 classes; regulatory subunits of phosphatidylinositol 3-kinase enzymes are present in classes I and III; adaptor proteins have been observed in class II complexes and may be present in other classes too.","definition_xrefs":["PMID:24587488","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"extrinsic component of membrane","termid":"GO:0019898"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_01876":null,"SJAG_02699":null,"SJAG_03403":null,"SJAG_04552":null,"SJAG_04860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidylinositol 3-kinase complex","type":"exact"},{"name":"PI3-kinase p85-subunit alpha- PI3-kinase p110 complex","type":"narrow"},{"name":"PI3K complex","type":"exact"},{"name":"PIK3C3-PIK3R4 complex","type":"narrow"},{"name":"PIK3CA-PIK3R1 complex","type":"narrow"},{"name":"phosphoinositide 3-kinase complex","type":"exact"}],"termid":"GO:0005942","terms_by_termid":{"GO:0034271":null,"GO:0034272":null}}


id: MONDO:0100497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prenatal/infant-onset muscle disorder characterized by limb contractures, muscle weakness (often with significant axial involvement), long bone fractures, and/or cardiac abnormalities.","definition_xrefs":["PMID:24105469","PMID:28040389","PMID:29691892","PMID:31660661","PMID:29575618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive titinopathy","termid":"MONDO:0100493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"titinopathy with congenital contractures","termid":"MONDO:0100497","xrefs":{"Monarch":{"xref_id":"0100497"}}}


id: PBO:0040130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB15 antisense RNA 1","termid":"PBO:0040130"}


id: GO:0033293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a monocarboxylic acid, any organic acid containing one carboxyl (COOH) group or anion (COO-).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"monocarboxylic acid binding","termid":"GO:0033293"}


id: GO:2000944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amylopectin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"regulation of amylopectin metabolic process","termid":"GO:2000942"},{"relation_name":"positively_regulates","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amylopectin metabolic process","synonyms":[{"name":"positive regulation of Amylopectin metabolism","type":"exact"}],"termid":"GO:2000944"}


id: PATO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000459 relative quantity value (obsolete PATO:0000459)","termid":"PATO:0000459"}


id: MONDO:0014404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Webb-Dattani syndrome","secondary_identifiers":["MEDGEN:863145","OMIM:615926","Orphanet:370006","UMLS:C4014708"],"synonyms":[{"name":"WEBB-Dattani syndrome","type":"related"},{"name":"WEDAS","type":"related"},{"name":"Webb-Dattani syndrome","type":"exact"},{"name":"hypothalamic insufficiency-secondary microcephaly-visual impairment-urinary anomalies syndrome","type":"exact"},{"name":"hypothalamo-pituitary-frontotemporal hypoplasia with visual and renal anomalies","type":"related"}],"termid":"MONDO:0014404","xrefs":{"Monarch":{"xref_id":"0014404"}}}


id: PBO:0050478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A6","termid":"PBO:0050478"}


id: PBO:0043541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin","termid":"PBO:0043541"}


id: PBO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 11","termid":"PBO:0070305"}


id: PBO:0058509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5699","termid":"PBO:0058509"}


id: MONDO:0100566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neonatal/infantile epilepsy syndrome that is characterized by the onset of myoclonic seizures between the ages of 6-18 months (range 4 months to 3 years). Males are twice as likely to be affected as females. Antecedent and birth history is unremarkable. Head size and neurological examination are normal. Prior development is usually normal. Cognitive, motor and behavioral difficulties are reported, especially if seizures are poorly controlled. Developmental outcome is normal in 60-85% of cases. Mild intellectual impairment and attention problems can be seen.","direct_ancestors":[{"relation_name":"is_a","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"},{"relation_name":"is_a","term_name":"neonatal/infantile-onset self-limited epilepsy syndrome","termid":"MONDO:0800488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"myoclonic epilepsy in infancy","secondary_identifiers":["UMLS:C0751120","GARD:19086","Orphanet:86909","MEDGEN:148242"],"synonyms":[{"name":"MEI","type":"exact"},{"name":"benign myoclonic epilepsy of infancy","type":"exact"},{"name":"benign myoclonus epilepsy of infancy","type":"exact"}],"termid":"MONDO:0100566","xrefs":{"Monarch":{"xref_id":"0100566"}}}


id: PBO:0049337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2H2 family member C, copy 2","termid":"PBO:0049337"}


id: PBO:0079834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine monophosphate synthetase","termid":"PBO:0079834"}


id: PBO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 42","termid":"PBO:0071201"}


id: MOD:01170
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a 2-ketoimine of pyruvicacid with a residue amino group.","definition_xrefs":["Unimod:422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid iminylated residue","synonyms":[{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:01170"}


id: GO:0007369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.","definition_xrefs":["ISBN:9780878933846","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation","secondary_identifiers":["Wikipedia:Gastrulation","Reactome:R-HSA-9758941"],"termid":"GO:0007369"}


id: PBO:0074676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 60","termid":"PBO:0074676"}


id: MONDO:0000778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A food allergy triggered by a plant fruit product.","definition_xrefs":["DOID:0060503"],"gene_count":0,"genotype_count":0,"name":"obsolete fruit allergy (obsolete MONDO:0000778)","secondary_identifiers":["NCIT:C172316"],"termid":"MONDO:0000778","xrefs":{"Monarch":{"xref_id":"0000778"}}}


id: GO:0071615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more ethyl groups from a molecule, involving the oxidation (i.e. electron loss) of one or more atoms in the substrate.","definition_xrefs":["GOC:mah","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative deethylation (obsolete GO:0071615)","termid":"GO:0071615"}


id: PBO:0071151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 16","termid":"PBO:0071151"}


id: PR:Q9P3A8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- knd1 gene.","definition_xrefs":["UniProtKB:Q9P3A8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-associated NEDD8-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.07c","synonyms":[{"name":"Spom972h-knd1","type":"exact"},{"name":"cullin-associated and neddylation-dissociated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3A8"}


id: MONDO:0004645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the buccal mucosa.","direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"buccal mucosa neoplasm","termid":"MONDO:0021241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"cheek mucosa cancer","secondary_identifiers":["NCIT:C9320","UMLS:C0153373","SCTID:363386008","MEDGEN:57550","ICD9:145.0","DOID:8702"],"synonyms":[{"name":"buccal mucosa cancer","type":"exact"},{"name":"cancer of buccal mucosa","type":"exact"},{"name":"malignant buccal mucosa neoplasm","type":"exact"},{"name":"malignant buccal mucosa tumor","type":"exact"},{"name":"malignant buccal mucosa tumour","type":"exact"},{"name":"malignant neoplasm of buccal mucosa","type":"exact"},{"name":"malignant neoplasm of cheek, inner aspect","type":"exact"},{"name":"malignant neoplasm of the buccal mucosa","type":"exact"},{"name":"malignant tumor of buccal mucosa","type":"exact"},{"name":"malignant tumor of the buccal mucosa","type":"exact"},{"name":"malignant tumour of buccal mucosa","type":"exact"},{"name":"malignant tumour of the buccal mucosa","type":"exact"}],"termid":"MONDO:0004645","xrefs":{"Monarch":{"xref_id":"0004645"}}}


id: PBO:0082571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin deacetylase; together with Cda1p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall","termid":"PBO:0082571"}


id: GO:1900291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of galactotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"galactotriose transport","termid":"GO:2001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of galactotriose transport","termid":"GO:1900291"}


id: GO:0046810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the extracellular matrix of a host cell.","definition_xrefs":["PMID:7996163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"host cell extracellular matrix binding","termid":"GO:0046810"}


id: PBO:0088555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog2","termid":"PBO:0088555"}


id: FYPO:0004697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1,2-dioctanoyl-sn-glycerol (DiC8 DAG). Cells stop growing (and may die) at a concentration of 1,2-dioctanoyl-sn-glycerol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 1,2-dioctanoyl-sn-glycerol","synonyms":[{"name":"hypersensitive to 1,2-dioctanoyl-sn-glycerol","type":"exact"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during mitotic cell cycle","type":"related"},{"name":"sensitive to 1,2-dioctanoyl-sn-glycerol during vegetative growth","type":"exact"},{"name":"sensitive to DiC8 DAG","type":"exact"}],"termid":"FYPO:0004697"}


id: GO:0019533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cellobiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellobiose, or 4-O-beta-D-glucopyranosyl-D-glucose, is a disaccharide that represents the basic repeating unit of cellulose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cellobiose transport","termid":"GO:0019533"}


id: MONDO:0020049
data:
  {"annotated_genes":["SJAG_01286","SJAG_01548","SJAG_02231","SJAG_00112","SJAG_01806","SJAG_03424"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[87455,87456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[87288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"},{"annotations":[87363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[87340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which the chromosomal anomaly involves an autosome.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_01286":null,"SJAG_01548":null,"SJAG_01806":null,"SJAG_02231":null,"SJAG_03424":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal anomaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19417","UMLS:C5681496","Orphanet:98127","MEDGEN:1843454"],"synonyms":[{"name":"autosome chromosomal anomaly","type":"exact"},{"name":"chromosomal anomaly of autosome","type":"exact"}],"termid":"MONDO:0020049","terms_by_termid":{"MONDO:0007925":null,"MONDO:0008684":null,"MONDO:0011402":null,"MONDO:0012574":null,"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0020049"}}}


id: MONDO:0040728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"campylobacteriosis","termid":"MONDO:0005688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Campylobacter fetus infectious disease","secondary_identifiers":["UMLS:C0275979","MEDGEN:547000","SCTID:111835002"],"synonyms":[{"name":"infection by Campylobacter fetus","type":"exact"},{"name":"infection by Campylobacter foetus","type":"exact"},{"name":"infection by vibrio fetus","type":"related"},{"name":"infection by vibrio foetus","type":"related"},{"name":"infection caused by Campylobacter fetus","type":"related"},{"name":"infection caused by Campylobacter foetus","type":"related"},{"name":"infection caused by vibrio fetus","type":"related"},{"name":"infection caused by vibrio foetus","type":"related"}],"termid":"MONDO:0040728","xrefs":{"Monarch":{"xref_id":"0040728"}}}


id: GO:0047674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-apiitol + NAD+ = D-apiose + H+ + NADH.","definition_xrefs":["EC:1.1.1.114","RHEA:15301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"apiose 1-reductase activity","secondary_identifiers":["KEGG_REACTION:R03577","MetaCyc:APIOSE-1-REDUCTASE-RXN"],"synonyms":[{"name":"D-apiitol reductase activity","type":"related"},{"name":"D-apiitol:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"D-apiose reductase activity","type":"related"}],"termid":"GO:0047674"}


id: PBO:0070290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 31","termid":"PBO:0070290"}


id: MONDO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation of a non-infectious thrombus, referred to as vegetation, on previously undamaged endocardium. It usually occurs as a complication of connective-tissue diseases and cancers because of the associated hypercoagulable state (see thrombophilia).","definition_xrefs":["MESH:D059905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"endocarditis","termid":"MONDO:0005025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"marantic endocarditis","secondary_identifiers":["DOID:0060068","MEDGEN:452215","UMLS:C0221390","SCTID:57181007"],"synonyms":[{"name":"non-bacterial thrombotic endocarditis","type":"exact"},{"name":"nonbacterial thrombotic endocarditis","type":"exact"}],"termid":"MONDO:0000610","xrefs":{"Monarch":{"xref_id":"0000610"}}}


id: PATO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the middle of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised medially","termid":"PATO:0001924"}


id: MONDO:0031054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 48, without situs inversus","secondary_identifiers":["MEDGEN:1823987","OMIM:620032","UMLS:C5774214"],"synonyms":[{"name":"CILD48","type":"exact"},{"name":"ciliary dyskinesia, primary, 48, without situs inversus","type":"exact"}],"termid":"MONDO:0031054","xrefs":{"Monarch":{"xref_id":"0031054"}}}


id: MONDO:0021060
data:
  {"annotated_genes":["SJAG_02536","SJAG_03126","SJAG_02342","SJAG_01181","SJAG_03453","SJAG_02923","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[86745,86747,86746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[86752,86751,86750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[86923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[89028,89029,89027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[87510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[88394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[88185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[87247,87248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"Developmental syndromes caused by germline mutations (or in rare cases by somatic mosaicism) in genes that alter the Ras subfamily and mitogen-activated protein kinases that control signal transduction.","definition_xrefs":["Wikipedia:RASopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_02536":null,"SJAG_02923":null,"SJAG_03126":null,"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"RASopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22213","EFO:1001502","NCIT:C179667","UMLS:C5555857","Orphanet:536391","DOID:0080690","MEDGEN:1792298"],"synonyms":[{"name":"RASopathy","type":"exact"},{"name":"Ras protein signal transduction disease","type":"exact"},{"name":"disorder of Ras protein signal transduction","type":"exact"}],"termid":"MONDO:0021060","terms_by_termid":{"MONDO:0008104":null,"MONDO:0009026":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0033669":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0021060"}}}


id: PBO:0055674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIPC antisense RNA 1","termid":"PBO:0055674"}


id: MONDO:0100365
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015012"}]},"cv_name":"mondo","definition":"Any disease that presents as a mucopolysaccharidosis or mucopolysaccharidosis-like disorder.","definition_xrefs":["MONDO:patterns/disease-like"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100365","terms_by_termid":{"MONDO:0015012":null},"xrefs":{"Monarch":{"xref_id":"0100365"}}}


id: PBO:0043717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 5","termid":"PBO:0043717"}


id: GO:0019919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of methylation of peptidyl-arginine to form peptidyl-N(omega),N(omega)-dimethyl-L-arginine.","definition_xrefs":["RESID:AA0069","RESID:AA0068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine omega-N-methylation","termid":"GO:0035247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine methylation, to asymmetrical-dimethyl arginine","synonyms":[{"name":"peptidyl-arginine methylation, to unsymmetrical-dimethyl arginine","type":"exact"}],"termid":"GO:0019919"}


id: PBO:0068640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 21, pseudogene","termid":"PBO:0068640"}


id: GO:0141014
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101231],"is_not":false,"summary":null,"term":"GO:0141014"}]},"cv_name":"biological_process","definition":"A cellular process that results in the silencing of ribosomes in quiescent cells. Quiescence takes place when cells encounter unfavorable conditions and cease to grow in bacteria and yeast. It also takes place in some specialized cells in higher eukaryotes, such as eggs. Ribosomes in a hibernation state are kept silent via association with proteins with inhibitory and protective functions.","definition_xrefs":["PMID:30177741","PMID:28468753","PMID:36653451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"ribosome hibernation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141014","terms_by_termid":{"GO:0141014":null}}


id: GO:1905390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukotriene B4 stimulus.","definition_xrefs":["GOC:TermGenie","PMID:14656734","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"response to leukotriene B4","termid":"GO:1905389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leukotriene B4","synonyms":[{"name":"cellular response to LTB4","type":"exact"}],"termid":"GO:1905390"}


id: MONDO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the meninges of the brain and/or spinal cord caused by an infectious agent (viral, bacterial, or fungal). Symptoms include headache, fever, vomiting, neck stiffness, photophobia, confusion, and seizures.","definition_xrefs":["NCIT:C79598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious meningitis","secondary_identifiers":["HP:0001287","ICD9:321.8","ICD9:322.9","MEDGEN:152668","UMLS:C0729584","DOID:9471","EFO:0000584","ICD9:322","SCTID:312216007"],"synonyms":[{"name":"infectious meningitis","type":"exact"},{"name":"infective meningitis","type":"exact"},{"name":"meningitis","type":"related"}],"termid":"MONDO:0004796","xrefs":{"Monarch":{"xref_id":"0004796"}}}


id: PBO:0040828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 3","termid":"PBO:0040828"}


id: PBO:0116752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit D2","termid":"PBO:0116752"}


id: PBO:0001330
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cells can become independent of the essential calnexin","termid":"PBO:0001330"}


id: PR:Q9P7P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.07c","synonyms":[{"name":"Spom972h-SPAC186.07c","type":"exact"}],"termid":"PR:Q9P7P8"}


id: GO:0047228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol + UDP-alpha-D-glucose = a 1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol + H+ + UDP.","definition_xrefs":["RHEA:47612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1,2-diacylglycerol 3-glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.337","MetaCyc:2.4.1.157-RXN"],"synonyms":[{"name":"UDP-glucose-diacylglycerol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacylglycerol 3-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacylglycerol glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,2-diacylglycerol 3-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:diacylglycerol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-diacylglycerol glucosyltransferase activity","type":"related"}],"termid":"GO:0047228"}


id: PBO:0040159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASIC4 antisense RNA 1","termid":"PBO:0040159"}


id: GO:0060154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cellular process that modulates the rate or extent of progression through the cell cycle in response to a virus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular process regulating host cell cycle in response to virus (obsolete GO:0060154)","termid":"GO:0060154"}


id: FYPO:0002742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron transport RNAs are transcribed from genes whose products are involved in iron transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of iron transport gene mRNA during vegetative growth","synonyms":[{"name":"increased iron transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002742"}


id: PR:O74792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf59 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF global transcription activator complex subunit snf59 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.09c","synonyms":[{"name":"Spom972h-snf59","type":"exact"}],"termid":"PR:O74792"}


id: GO:0045584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell differentiation","termid":"GO:0045583"},{"relation_name":"negatively_regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytotoxic T cell differentiation","synonyms":[{"name":"down regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"down-regulation of cytotoxic T cell differentiation","type":"exact"},{"name":"downregulation of cytotoxic T cell differentiation","type":"exact"},{"name":"inhibition of cytotoxic T cell differentiation","type":"narrow"},{"name":"negative regulation of cytotoxic T cell development","type":"related"},{"name":"negative regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"negative regulation of cytotoxic T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045584"}


id: GO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a light-responsive receptor in the compound eye over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye photoreceptor development","synonyms":[{"name":"adult eye photoreceptor development","type":"narrow"}],"termid":"GO:0042051"}


id: PBO:0068322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 20","termid":"PBO:0068322"}


id: SO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a signal recognition particle (SRP) RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"SRP_RNA_encoding","termid":"SO:0000642"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_gene","synonyms":[{"name":"SRP RNA gene","type":"exact"}],"termid":"SO:0001269"}


id: GO:0099142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when ATP has been bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"}


id: PBO:0070403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP9 pre-mRNA splicing factor","termid":"PBO:0070403"}


id: FYPO:0006645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during metaphase is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during metaphase","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during metaphase","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during metaphase during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006645"}


id: FYECO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed on normal medium after a short incubation in medium containing hydroxyurea.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient hydroxyurea treatment","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"acute hydroxyurea treatment","type":"broad"}],"termid":"FYECO:0000434"}


id: GO:0075237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of zoospore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of zoospore movement on or near host (obsolete GO:0075237)","termid":"GO:0075237"}


id: PBO:0031787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_sister_chromatid_segregation","termid":"PBO:0031787"}


id: PBO:0084950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL63 trans-acting MAL-activator, MAL61 maltose permease, and MAL62 maltase; on the left arm of Chromosome VIII, but not in strain S288C","termid":"PBO:0084950"}


id: PBO:0109167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein Hpz1, implicated in DNA repair","termid":"PBO:0109167"}


id: PBO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain (predicted)","termid":"PBO:0017006"}


id: PBO:0065302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 12","termid":"PBO:0065302"}


id: GO:0050571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-glucitol + NADP+ = 1,5-anhydro-D-fructose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.263","RHEA:20665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose reductase activity","secondary_identifiers":["KEGG_REACTION:R05682","MetaCyc:1.1.1.263-RXN","Reactome:R-HSA-9773976"],"synonyms":[{"name":"1,5-anhydro-D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"AF reductase activity","type":"related"}],"termid":"GO:0050571"}


id: GO:0019261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,4-dichlorobenzene (p-dichlorobenzene or paramoth), a derivative of benzene with two chlorine atoms attached at opposite positions on the ring.","definition_xrefs":["GOC:ai","PMID:9148781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,4-dichlorobenzene catabolic process","secondary_identifiers":["MetaCyc:14DICHLORBENZDEG-PWY","UM-BBD_pathwayID:dcz"],"synonyms":[{"name":"1,4-dichlorobenzene breakdown","type":"exact"},{"name":"1,4-dichlorobenzene catabolism","type":"exact"},{"name":"1,4-dichlorobenzene degradation","type":"exact"}],"termid":"GO:0019261"}


id: MONDO:0007929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Epstein syndrome (obsolete MONDO:0007929)","secondary_identifiers":["NCIT:C131639"],"termid":"MONDO:0007929","xrefs":{"Monarch":{"xref_id":"0007929"}}}


id: PBO:0068149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 456","termid":"PBO:0068149"}


id: PATO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000230 proprioreception (obsolete PATO:0000230)","termid":"PATO:0000230"}


id: PBO:0055785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 5","termid":"PBO:0055785"}


id: GO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a monocyte population by cell division.","definition_xrefs":["GOC:dph","PMID:18467591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte proliferation","termid":"GO:0061516"}


id: GO:0090194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:dph","GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"negatively_regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerulus development","termid":"GO:0090194"}


id: FYPO:0001300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of oleoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0005447"],"is_obsolete":false,"name":"abnormal oleoyl-CoA ligase activity","synonyms":[{"name":"abnormal oleoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001300"}


id: PR:Q9HDV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine amidotransferase PB2B2.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.05","secondary_identifiers":["UniProtKB:Q9HDV0"],"synonyms":[{"name":"Spom972h-puuD","type":"exact"}],"termid":"PR:Q9HDV0"}


id: GO:0140622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Lipid transfer complex that is responsible for the non-vesicular transport of phospholipids, such as phosphatidylserine, from the endoplasmic reticulum to the endosome. It resides in the endosomal (acceptor) membrane and binds to specific lipids on the donor membrane at the ER-endosome contact site.","definition_xrefs":["PMID:24366873","GOC:lnp","PMID:20016005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0032991","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"ER-to-endosome phospholipid transfer complex","termid":"GO:0140622"}


id: FYPO:0000532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic cell cycle arrest in response to pheromone is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000298","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"decreased pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"pheromone-induced cell cycle arrest: decreased","type":"related"},{"name":"reduced mitotic cell cycle arrest in response to pheromone","type":"exact"}],"termid":"FYPO:0000532"}


id: GO:0072266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric capsule from unspecified parts. The metanephric capsule is the tough fibrous layer surrounding the metanephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule formation","termid":"GO:0072129"},{"relation_name":"part_of","term_name":"metanephric capsule morphogenesis","termid":"GO:0072265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule formation","termid":"GO:0072266"}


id: PBO:0052618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRI1 homolog","termid":"PBO:0052618"}


id: GO:0044471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the aggregation, arrangement and bonding together of a set of components to form a pore complex in a membrane of the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:21549739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated disruption of anatomical structure in another organism","termid":"GO:0140138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated pore formation in membrane of another organism","synonyms":[{"name":"envenomation resulting in pore formation in membrane of another organism","type":"exact"},{"name":"envenomation resulting in pore formation in membrane of other organism","type":"exact"}],"termid":"GO:0044471"}


id: PBO:0076444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 15","termid":"PBO:0076444"}


id: PBO:0082333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter; multidrug transporter involved in multiple drug resistance; mediates sterol uptake when sterol biosynthesis is compromised; regulated by Pdr1p; required for anaerobic growth; PDR11 has a paralog, AUS1, that arose from the whole genome duplication","termid":"PBO:0082333"}


id: PBO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 18","termid":"PBO:0072141"}


id: PBO:0062182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 3B pseudogene","termid":"PBO:0062182"}


id: PBO:0050537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPN antisense RNA 1","termid":"PBO:0050537"}


id: PBO:0035879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0035879"}


id: FYPO:0004446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of endocytosis is decreased during the meiotic cell cycle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased endocytosis during meiotic cell cycle","synonyms":[{"name":"reduced actin-mediated endocytosis during meiotic cell cycle","type":"exact"},{"name":"reduced endocytosis during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004446"}


id: GO:0019843
data:
  {"annotated_genes":["SJAG_00566","SJAG_01087","SJAG_00945","SJAG_02508","SJAG_03053","SJAG_04304","SJAG_03197","SJAG_00083","SJAG_04324","SJAG_00315","SJAG_04188","SJAG_04108","SJAG_04767","SJAG_00748","SJAG_00503","SJAG_04663","SJAG_00034","SJAG_04281","SJAG_04414","SJAG_00069","SJAG_01201","SJAG_02024","SJAG_02535","SJAG_02530","SJAG_00067","SJAG_00629","SJAG_03952","SJAG_00166","SJAG_04066","SJAG_01132","SJAG_04847","SJAG_02723","SJAG_02312","SJAG_01194","SJAG_02861","SJAG_01387","SJAG_00253","SJAG_01568","SJAG_00323","SJAG_02359","SJAG_04689","SJAG_02427","SJAG_00782","SJAG_04342","SJAG_03297","SJAG_04900","SJAG_02280","SJAG_00544","SJAG_01468","SJAG_01478","SJAG_04492","SJAG_00465","SJAG_02372","SJAG_00889","SJAG_05248","SJAG_04754","SJAG_03252","SJAG_02840","SJAG_03326"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59609,62232,65381,65897,65967,66739,67957,68366,68778,69419,71206,72869,73977,74003,77305,78729,78985,79773,80062,91786,97140,98137,98138,98636,102958,104110,107235,107236,107536,107537,108525,111368,112211,114162,114163,116045,116046,117436],"is_not":false,"summary":null,"term":"GO:0019843"},{"annotations":[72792,74088,90690,73809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008097"},{"annotations":[116324,72012,76053,76502,72968,81750,78330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070180"},{"annotations":[108475,71165,75277,60252,115745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042134"},{"annotations":[72633,79325,98412,117856,72536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070181"}]},"cv_name":"molecular_function","definition":"Binding to a ribosomal RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00067":null,"SJAG_00069":null,"SJAG_00083":null,"SJAG_00166":null,"SJAG_00253":null,"SJAG_00315":null,"SJAG_00323":null,"SJAG_00465":null,"SJAG_00503":null,"SJAG_00544":null,"SJAG_00566":null,"SJAG_00629":null,"SJAG_00748":null,"SJAG_00782":null,"SJAG_00889":null,"SJAG_00945":null,"SJAG_01087":null,"SJAG_01132":null,"SJAG_01194":null,"SJAG_01201":null,"SJAG_01387":null,"SJAG_01468":null,"SJAG_01478":null,"SJAG_01568":null,"SJAG_02024":null,"SJAG_02280":null,"SJAG_02312":null,"SJAG_02359":null,"SJAG_02372":null,"SJAG_02427":null,"SJAG_02508":null,"SJAG_02530":null,"SJAG_02535":null,"SJAG_02723":null,"SJAG_02840":null,"SJAG_02861":null,"SJAG_03053":null,"SJAG_03197":null,"SJAG_03252":null,"SJAG_03297":null,"SJAG_03326":null,"SJAG_03952":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04188":null,"SJAG_04281":null,"SJAG_04304":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04414":null,"SJAG_04492":null,"SJAG_04663":null,"SJAG_04689":null,"SJAG_04754":null,"SJAG_04767":null,"SJAG_04847":null,"SJAG_04900":null,"SJAG_05248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"rRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000944"],"synonyms":[{"name":"base pairing with rRNA","type":"narrow"}],"termid":"GO:0019843","terms_by_termid":{"GO:0008097":null,"GO:0019843":null,"GO:0042134":null,"GO:0070180":null,"GO:0070181":null}}


id: MONDO:0005675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital disorder of lambs caused by a virus closely related to or identical with certain strains of bovine viral diarrhea virus.","definition_xrefs":["MESH:D001882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"border disease","secondary_identifiers":["EFO:0007177"],"termid":"MONDO:0005675","xrefs":{"Monarch":{"xref_id":"0005675"}}}


id: GO:0015530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of shikimate from one side of a membrane to the other. Shikimate is an important intermediate in the biosynthesis of aromatic amino acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"shikimate transmembrane transporter activity","termid":"GO:0015530"}


id: GO:0071332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fructose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fructose","termid":"GO:0009750"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fructose stimulus","termid":"GO:0071332"}


id: GO:0031138
data:
  {"annotated_genes":["SJAG_02773","SJAG_02426","SJAG_00145","SJAG_01919","SJAG_01754","SJAG_03081","SJAG_04394","SJAG_01699","SJAG_02592","SJAG_02266","SJAG_00472","SJAG_02723","SJAG_02444","SJAG_00975","SJAG_04312","SJAG_01401","SJAG_02730","SJAG_04682","SJAG_01084","SJAG_04026","SJAG_01311","SJAG_01254","SJAG_03048","SJAG_02921","SJAG_00600","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61371,67091,90580,98175,103416,104161,106719,118407],"is_not":false,"summary":null,"term":"GO:0031138"},{"annotations":[96941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[106299,110833,94700,108308,108658,107615,117375,93180,89971,116310,96143,102329,107712,108462,96001,103644,117910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010515"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01919":null,"SJAG_02266":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02921":null,"SJAG_03048":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"negatively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"negative regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"down regulation of conjugation with cellular fusion","type":"exact"},{"name":"down-regulation of conjugation with cellular fusion","type":"exact"},{"name":"downregulation of conjugation with cellular fusion","type":"exact"},{"name":"inhibition of conjugation with cellular fusion","type":"narrow"}],"termid":"GO:0031138","terms_by_termid":{"GO:0010515":null,"GO:0031138":null,"GO:0140538":null}}


id: PBO:0003560
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.198","termid":"PBO:0003560"}


id: MONDO:0850812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease characterized by impaired function or reduced numbers of dendritic cells.","definition_xrefs":["DOID:0111963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"dendritic cell deficiency","secondary_identifiers":["UMLS:C4746814","MEDGEN:1656300"],"termid":"MONDO:0850812","xrefs":{"Monarch":{"xref_id":"0850812"}}}


id: PBO:0112513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, UPF0768 family","termid":"PBO:0112513"}


id: GO:0044007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from a host to another host or from a host to another place in the environment. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of symbiont from host (obsolete GO:0044007)","synonyms":[{"name":"dissemination or transmission of organism from host","type":"exact"}],"termid":"GO:0044007"}


id: GO:0002904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"positively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell apoptotic process","synonyms":[{"name":"activation of B cell apoptosis","type":"narrow"},{"name":"positive regulation of B cell apoptosis","type":"narrow"},{"name":"stimulation of B cell apoptosis","type":"narrow"},{"name":"up regulation of B cell apoptosis","type":"exact"},{"name":"up-regulation of B cell apoptosis","type":"exact"},{"name":"upregulation of B cell apoptosis","type":"exact"}],"termid":"GO:0002904"}


id: PBO:0088597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic metaphase/anaphase APC coactivator Slp1/Cdc20","termid":"PBO:0088597"}


id: MONDO:0017215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calciphylaxis is a disease in which blood vessels (veins and arteries) become blocked by a build-up of calcium in the walls of the vessels, preventing blood from flowing to the skin or internal organs. The lack of blood flow (ischemia) damages healthy tissue and causes itto die (necrosis). The most obvious and frequent symptom of calciphylaxis is damage to the skin, as ulcers can developand become infected easily. Calciphylaxis can also affect fat tissue, internal organs, and skeletal muscle, causing infections, pain, and organ failure.These symptoms are often irreversible, and many individuals with calciphylaxis may not survive more thana few months after they are diagnosed due to infection that spreads throughout the body (sepsis), or organ failure. The exact cause of calciphylaxis is unknown. Treatments may include medications to reduce pain, antibiotics to treat infections, and various approaches to preventing the development or worsening of this condition.","definition_xrefs":["GARD:0005980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcinosis","termid":"MONDO:0002123"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"calciphylaxis","secondary_identifiers":["SCTID:237900002","Orphanet:280062","UMLS:C0006666","icd11.foundation:574291789","MESH:D002115","MedDRA:10051714","MEDGEN:2404","GARD:5980","DOID:4734","ICD9:275.49","NCIT:C84607"],"synonyms":[{"name":"idiopathic calciphylaxis","type":"related"}],"termid":"MONDO:0017215","xrefs":{"Monarch":{"xref_id":"0017215"}}}


id: PBO:0046465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum aminopeptidase 1","termid":"PBO:0046465"}


id: GO:1905478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["PMID:10377385","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glutamate-ammonia ligase activity (obsolete GO:1905478)","synonyms":[{"name":"regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"regulation of L-glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905478"}


id: PBO:0072513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 42","termid":"PBO:0072513"}


id: MONDO:0017101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia type II","termid":"MONDO:0011818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type IIa","secondary_identifiers":["Orphanet:269001","NANDO:1200568","MEDGEN:375876","UMLS:C1846386","GARD:17270"],"synonyms":[{"name":"FCD type IIa","type":"exact"}],"termid":"MONDO:0017101","xrefs":{"Monarch":{"xref_id":"0017101"}}}


id: MONDO:0004990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subsets of breast carcinoma defined by expression of genes characteristic of luminal epithelial cells.","definition_xrefs":["NCIT:C53555","NCIT:C53554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast tumor luminal A or B","secondary_identifiers":["EFO:0000306","DOID:0060548"],"synonyms":[{"name":"breast tumor luminal","type":"exact"},{"name":"breast tumour luminal","type":"exact"},{"name":"luminal breast cancer","type":"exact"},{"name":"luminal breast carcinoma","type":"related"}],"termid":"MONDO:0004990","xrefs":{"Monarch":{"xref_id":"0004990"}}}


id: PBO:0064054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 88","termid":"PBO:0064054"}


id: PBO:0048668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 3, pseudogene","termid":"PBO:0048668"}


id: GO:0140662
data:
  {"annotated_genes":["SJAG_00447","SJAG_02378","SJAG_01510","SJAG_00790","SJAG_04055","SJAG_01615","SJAG_01002","SJAG_01874","SJAG_00564","SJAG_02875","SJAG_01664","SJAG_03320","SJAG_04511","SJAG_01186","SJAG_00609","SJAG_03570","SJAG_02926","SJAG_03237","SJAG_04121"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57012,57939,58352,59562,60293,60627,60746,62021,63015,65342,65596,66101,66427,67661,68194,68348,69051,70593,71321],"is_not":false,"summary":null,"term":"GO:0140662"}]},"cv_name":"molecular_function","definition":"Binding to a protein or a protein-containing complex to assist the protein folding process, driven by ATP hydrolysis.","definition_xrefs":["PMID:27365453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone","termid":"GO:0044183"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00564":null,"SJAG_00609":null,"SJAG_00790":null,"SJAG_01002":null,"SJAG_01186":null,"SJAG_01510":null,"SJAG_01615":null,"SJAG_01664":null,"SJAG_01874":null,"SJAG_02378":null,"SJAG_02875":null,"SJAG_02926":null,"SJAG_03237":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04055":null,"SJAG_04121":null,"SJAG_04511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein folding chaperone","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0140662","terms_by_termid":{"GO:0140662":null}}


id: PBO:0082060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase; multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway; mutation is functionally complemented by human HSD17B4","termid":"PBO:0082060"}


id: PBO:0113451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; essential for integrity and function of EGO; targeted to vacuole via AP-3 pathway; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0113451"}


id: PBO:0091053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm7","termid":"PBO:0091053"}


id: GO:0070647
data:
  {"annotated_genes":["SJAG_02341","SJAG_03325","SJAG_00033","SJAG_00727","SJAG_03896","SJAG_02082","SJAG_04011","SJAG_05032","SJAG_03733","SJAG_00615","SJAG_02764","SJAG_00776","SJAG_03843","SJAG_04948","SJAG_02503","SJAG_01776","SJAG_00795","SJAG_05977","SJAG_03950","SJAG_00604","SJAG_01302","SJAG_00878","SJAG_05297","SJAG_00720","SJAG_01018","SJAG_03616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108304,97080,94781,93225,72700,94660,80489,91412,112158,82144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"},{"annotations":[74580,73045,81380,75853,76753,91021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[74184,77135,74202,99540,116486,77243,77360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[75882,62644,72340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to or removed from a target protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00604":null,"SJAG_00615":null,"SJAG_00720":null,"SJAG_00727":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_01302":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_02341":null,"SJAG_02503":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03616":null,"SJAG_03733":null,"SJAG_03843":null,"SJAG_03896":null,"SJAG_03950":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05032":null,"SJAG_05297":null,"SJAG_05977":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein modification by small protein conjugation or removal","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0070647","terms_by_termid":{"GO:0000338":null,"GO:0016925":null,"GO:0032447":null,"GO:0045116":null}}


id: MONDO:0019392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adnexal neoplasm occurring during childhood or adolescence. It usually presents as a papular lesion or a plaque on the head and neck. It may arise in an organoid nevus such as sebaceous. It is characterized by an endophytic invagination of the epithelium into the dermis. There are dermal cystic spaces present, containing villous projections. Complete excision is curative.","definition_xrefs":["NCIT:C4172"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"sweat gland adenoma","termid":"MONDO:0021110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"syringocystadenoma papilliferum","secondary_identifiers":["MedDRA:10042926","MEDGEN:98362","ICDO:8406/0","GARD:5100","EFO:1000558","icd11.foundation:530424877","DOID:5445","Orphanet:840","UMLS:C0406803","SCTID:239121009"],"synonyms":[{"name":"SCAP","type":"exact"},{"name":"Syringadenoma","type":"exact"},{"name":"Syringadenoma papilliferum","type":"exact"},{"name":"fistulous vegetative verrucous hydradenoma","type":"exact"},{"name":"naevus syringocystadenomatosus papilliferus","type":"exact"},{"name":"papillary Syringadenoma","type":"exact"},{"name":"papillary Syringadenoma (syringocystadenoma papilliferum)","type":"exact"},{"name":"papillary syringadenoma (morphologic abnormality)","type":"exact"},{"name":"papillary syringocystadenoma","type":"exact"},{"name":"syringocystadenoma papilliferum","type":"exact"}],"termid":"MONDO:0019392","xrefs":{"Monarch":{"xref_id":"0019392"}}}


id: MONDO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cryptogenic organizing pneumonia (obsolete MONDO:0000267)","termid":"MONDO:0000267","xrefs":{"Monarch":{"xref_id":"0000267"}}}


id: PBO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med15 (predicted)","termid":"PBO:0003421"}


id: PBO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP18 small subunit processome component","termid":"PBO:0080105"}


id: MONDO:0019015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omphalocele is an embryopathy classified in the group of abdominal celosomias and is characterized by a large hernia of the abdominal wall, centered on the umbilical cord, in which the protruding viscera are protected by a sac.","definition_xrefs":["Orphanet:660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal wall malformation","termid":"MONDO:0100298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele","secondary_identifiers":["NCIT:C98997","UMLS:C0795690","GARD:16540","DOID:0060327","SCTID:18735004","icd11.foundation:1168696429","MESH:D006554","SCTID:396347007","HP:0001539","ICD9:756.72","MedDRA:10030308","MEDGEN:162756"],"synonyms":[{"name":"congenital omphalocele","type":"exact"},{"name":"eventration","type":"broad"},{"name":"exomphalos","type":"exact"},{"name":"omphalocele","type":"exact"},{"name":"omphalocele (disease)","type":"exact"},{"name":"omphalocoele","type":"exact"}],"termid":"MONDO:0019015","xrefs":{"Monarch":{"xref_id":"0019015"}}}


id: FYPO:0003152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during cellular response to heat","synonyms":[{"name":"increased protein accumulation during cellular response to heat","type":"related"},{"name":"increased protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003152"}


id: PBO:0080552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 11","termid":"PBO:0080552"}


id: GO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tooth mineralization","termid":"GO:0070171"},{"relation_name":"is_a","term_name":"regulation of enamel mineralization","termid":"GO:0070173"},{"relation_name":"negatively_regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of enamel mineralization","termid":"GO:0070174"}


id: GO:0005172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor binding","synonyms":[{"name":"VEGF receptor binding","type":"exact"},{"name":"VEGFR binding","type":"exact"},{"name":"vascular endothelial growth factor","type":"narrow"},{"name":"vascular endothelial growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005172"}


id: PBO:0029439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation","termid":"PBO:0029439"}


id: MOD:00317
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-3,4-didehydroretinylidene-L-lysine.","definition_xrefs":["Unimod:433#K","PubMed:3257009","PubMed:10717661","RESID:AA0312","PubMed:4056688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-3,4-didehydroretinylidene-L-lysine","synonyms":[{"name":"(S)-2-amino-6-[(2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexa-1,3-dien-1-yl)-2,4,6,8-nonatetraenylidene]aminohexanoic acid","type":"exact"},{"name":"3,4-didehydroretinylidene","type":"related"},{"name":"Didehydroretinylidene","type":"related"},{"name":"N6-(3,4-didehydroretinylidene)-L-lysine","type":"exact"},{"name":"N6-3-dehydroretinal-L-lysine","type":"exact"},{"name":"N6-3-dehydroretinyl-lysine","type":"exact"}],"termid":"MOD:00317"}


id: PBO:0070438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPH3AL antisense RNA 1","termid":"PBO:0070438"}


id: PBO:0044883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 10","termid":"PBO:0044883"}


id: MONDO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the pericardium.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart cancer","termid":"MONDO:0001340"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005267"],"is_obsolete":false,"name":"pericardium cancer","secondary_identifiers":["MEDGEN:87561","NCIT:C4567","UMLS:C0346609","DOID:116"],"synonyms":[{"name":"cancer of pericardium","type":"exact"},{"name":"malignant neoplasm of pericardium","type":"exact"},{"name":"malignant neoplasm of the pericardium","type":"exact"},{"name":"malignant pericardial neoplasm","type":"exact"},{"name":"malignant pericardial tumor","type":"exact"},{"name":"malignant pericardial tumour","type":"exact"},{"name":"malignant pericardium neoplasm","type":"exact"},{"name":"malignant tumor of pericardium","type":"exact"},{"name":"malignant tumor of the pericardium","type":"exact"},{"name":"malignant tumour of pericardium","type":"exact"},{"name":"malignant tumour of the pericardium","type":"exact"},{"name":"pericardial tumor","type":"broad"},{"name":"pericardial tumour","type":"broad"},{"name":"pericardium cancer","type":"exact"}],"termid":"MONDO:0001322","xrefs":{"Monarch":{"xref_id":"0001322"}}}


id: PBO:0036302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18b","termid":"PBO:0036302"}


id: PBO:0084338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore localized protein of unknown function; interacts with Cnn1p (CENP-T); orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-W and fission yeast new1","termid":"PBO:0084338"}


id: PBO:0028104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0028104"}


id: GO:0071166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a ribonucleoprotein complex is transported to, or maintained in, a specific location within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ribonucleoprotein complex localization","synonyms":[{"name":"RNP localization","type":"exact"},{"name":"cellular ribonucleoprotein complex localization","type":"exact"},{"name":"establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:0071166"}


id: FYPO:0002397
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[121250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[121091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[121189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal cytoskeleton organization","termid":"FYPO:0000802"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal cytoskeleton","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04522","SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta","rga4delta","pom1delta"],"synonyms":[{"name":"abnormal cytoskeleton physical object quality","type":"exact"}],"termid":"FYPO:0002397","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0034092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"FDXR-related optic atrophy mitochondrial dysfunction syndrome","termid":"MONDO:1060116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"optic atrophy-ataxia-peripheral neuropathy-global developmental delay syndrome","secondary_identifiers":["GARD:22231","UMLS:C5681321","MEDGEN:1807322","Orphanet:543470"],"termid":"MONDO:0034092","xrefs":{"Monarch":{"xref_id":"0034092"}}}


id: PBO:0068916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 159, pseudogene","termid":"PBO:0068916"}


id: MONDO:0018715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma present and fully formed at birth. The different types are Rapidly involuting congenital hemangiomas (RICH), Partially involuting congenital hemangioma (PICH) and Non-involuting congenital hemangiomas (NICH).","definition_xrefs":["NCIT:C3841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hemangioma","secondary_identifiers":["MEDGEN:65912","GARD:21910","Orphanet:458775","SCTID:32361000119104","UMLS:C0235753"],"synonyms":[{"name":"congenital angioma","type":"related"},{"name":"congenital hemangioma","type":"exact"}],"termid":"MONDO:0018715","xrefs":{"Monarch":{"xref_id":"0018715"}}}


id: PBO:0091664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane mannan endo-1,6-alpha-mannosidase Dfg502","termid":"PBO:0091664"}


id: MONDO:0013874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial glucocorticoid deficiency in which the cause of the disease is a mutation in the NNT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial glucocorticoid deficiency","termid":"MONDO:0008733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid deficiency 4","secondary_identifiers":["OMIM:614736","UMLS:C3553587","NCIT:C131452","MEDGEN:766501","GARD:15840"],"synonyms":[{"name":"GCCD4","type":"related"},{"name":"NNT familial glucocorticoid deficiency","type":"exact"},{"name":"familial glucocorticoid deficiency caused by mutation in NNT","type":"exact"},{"name":"glucocorticoid deficiency 4","type":"exact"},{"name":"glucocorticoid deficiency 4 with or without mineralocorticoid deficiency","type":"related"},{"name":"glucocorticoid deficiency 4, with or without mineralocorticoid deficiency","type":"exact"},{"name":"glucocorticoid deficiency type 4","type":"exact"}],"termid":"MONDO:0013874","xrefs":{"Monarch":{"xref_id":"0013874"}}}


id: PBO:0063762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHC2 antisense RNA 1","termid":"PBO:0063762"}


id: PBO:0029377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lipid_particles_present_in_decreased_numbers","termid":"PBO:0029377"}


id: GO:0061321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a garland nephrocyte. A garland nephrocyte is an insect renal cell that filters hemolymph and forms a ring with other garland nephrocytes around the esophagus. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10","GOC:sart","PMID:19783135","CL:0000486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"garland nephrocyte differentiation","secondary_identifiers":["GO:0007514"],"synonyms":[{"name":"garland cell differentiation","type":"exact"}],"termid":"GO:0061321"}


id: PBO:0050623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid dehydrogenase like 1","termid":"PBO:0050623"}


id: SO:0001541
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that decreases the level of mature, spliced and processed RNA with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"level_of_transcript_variant","termid":"SO:0001540"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_transcript_level_variant","synonyms":[{"name":"decreased transcript level","type":"exact"}],"termid":"SO:0001541"}


id: GO:0102188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102188)","termid":"GO:0102188"}


id: PBO:0085253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein of peroxisomes; involved in peroxisomal inheritance; recruitment to peroxisomes is mediated by interaction with Pex3p at the peroxisomal membrane; Inp1p and Pex3p tether peroxisomes to plasma membrane","termid":"PBO:0085253"}


id: GO:0045091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single stranded viral RNA replication via double stranded DNA intermediate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral genome replication","termid":"GO:0045069"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"regulates","term_name":"single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0039692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single stranded viral RNA replication via double stranded DNA intermediate","synonyms":[{"name":"regulation of retroviral genome replication","type":"exact"}],"termid":"GO:0045091"}


id: PBO:0081272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 37A","termid":"PBO:0081272"}


id: GO:0016657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a nitrogenous group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor (obsolete GO:0016657)","synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor","type":"related"}],"termid":"GO:0016657"}


id: FYPO:0002135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is increased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-RNA interaction","termid":"FYPO:0002132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0002131","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased protein-RNA interaction","synonyms":[{"name":"increased RNA binding","type":"exact"},{"name":"increased RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002135"}


id: PBO:0078214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-7","termid":"PBO:0078214"}


id: GO:0044462
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of an external encapsulating structure, a structure that lies outside the plasma membrane and surrounds the entire cell. This does not include the periplasmic space but does include the outer membrane (of gram negative bacteria) or cell wall (of yeast or Gram positive bacteria).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete external encapsulating structure part (obsolete GO:0044462)","termid":"GO:0044462"}


id: GO:0043500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["PMID:11181628","PMID:11449884","PMID:12605307","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle system process","termid":"GO:0003012"},{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle adaptation","synonyms":[{"name":"muscle plasticity","type":"related"}],"termid":"GO:0043500"}


id: PBO:0062542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily I member 1","termid":"PBO:0062542"}


id: GO:0035369
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin-like complex that is present in at least the plasma membrane of pre-B cells, and that is composed of two identical immunoglobulin heavy chains and two surrogate light chains, each composed of the lambda-5 and VpreB proteins, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["PMID:17306522","ISBN:0781765196","GOC:add","PMID:16464608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pre-B cell receptor complex","synonyms":[{"name":"pre-BCR","type":"exact"}],"termid":"GO:0035369"}


id: PBO:0078401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 11-1","termid":"PBO:0078401"}


id: MONDO:0009612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitamin B12-unresponsive methylmalonic acidemia is an inborn error of vitamin B12 (cobalamin) metabolism characterized by recurrent ketoacidotic crises or transient vomiting, dehydration, hypotonia and intellectual deficit, which does not respond to administration of vitamin B12. There are two types of vitamin B12-unresponsive methylmalonic acidemia: mut0 and mut-.","definition_xrefs":["Orphanet:27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency","secondary_identifiers":["NCIT:C148366","MESH:C565390","NANDO:1200794","UMLS:C1855114","DOID:0060740","OMIM:251000","GARD:3586","MEDGEN:344424"],"synonyms":[{"name":"MCM deficiency","type":"related"},{"name":"methylmalonic acidemia due to methylmalonyl-CoA mutase deficiency","type":"exact"},{"name":"methylmalonic acidemia due to methylmalonyl-Coa mutase deficiency MMA due to MCM deficiency","type":"related"},{"name":"methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency","type":"exact"},{"name":"methylmalonic aciduria mut type","type":"exact"},{"name":"methylmalonic aciduria, mut type","type":"related"},{"name":"methylmalonic aciduria, mut(-) type","type":"related"},{"name":"methylmalonic aciduria, mut(0) type","type":"related"},{"name":"methylmalonyl-CoA mutase deficiency","type":"exact"},{"name":"methylmalonyl-Coenzyme A mutase deficiency","type":"exact"},{"name":"vitamin B12-unresponsive methylmalonic acidemia","type":"related"},{"name":"vitamin B12-unresponsive methylmalonic aciduria","type":"exact"}],"termid":"MONDO:0009612","xrefs":{"Monarch":{"xref_id":"0009612"}}}


id: GO:1990908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Hydrolysis of Lys63-Linked ubiquitin unit(s) from a ubiquitinated protein by a mechanism where zinc acts as the nucleophile.","definition_xrefs":["PMID:26368668"],"gene_count":0,"genotype_count":0,"name":"obsolete Lys63-specific zinc metallopeptidase deubiquitinase activity (obsolete GO:1990908)","termid":"GO:1990908"}


id: PBO:0062609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily S member 1","termid":"PBO:0062609"}


id: MONDO:0023100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial clefting corpus callosum agenesis","termid":"MONDO:0023100","xrefs":{"Monarch":{"xref_id":"0023100"}}}


id: MONDO:0800389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to monochloroacetic acid.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochloroacetic acid poisoning","termid":"MONDO:0800389","xrefs":{"Monarch":{"xref_id":"0800389"}}}


id: PATO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium wavelength of that portion of the visible spectrum lying between orange and green, evoked in the human observer by radiant energy with wavelengths of approximately 570 to 590 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow","termid":"PATO:0000324"}


id: PBO:0085565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase; multifunctional oxidoreductase of the ER lumen, essential for disulfide bond formation in secretory and cell-surface proteins, processing of non-native disulfide bonds; Ero1p activator; complexes with exomannosidase, Mnl1p to facilitate the recognition of misfolded glycoproteins and the trimming of glycan Man8GlcNAc2 to Man7GlcNAc2 on substrates, thereby accelerating ERAD; PDI1 has a paralog, EUG1, that arose from the whole genome duplication","termid":"PBO:0085565"}


id: GO:0015442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + (Na+ or H+)(in) = ADP + phosphate + (Na+ or H+)(out).","definition_xrefs":["TC:3.A.2.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-/sodium-translocating ATPase activity (obsolete GO:0015442)","synonyms":[{"name":"hydrogen-/sodium-translocating ATPase activity","type":"exact"},{"name":"proton-/sodium-translocating ATPase activity","type":"exact"}],"termid":"GO:0015442"}


id: PBO:0077687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 18","termid":"PBO:0077687"}


id: PBO:0090187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Mis19 ortholog, syntenic position","termid":"PBO:0090187"}


id: GO:0140765
data:
  {"annotated_genes":["SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91826],"is_not":false,"summary":null,"term":"GO:0140765"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 56) + NAD+ + H2O = histone H3 L-lysine (position 56) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K56 to NAD, producing nicotinamide.","definition_xrefs":["PMID:23911928","PMID:30374165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0019213","GO:0016740","GO:0033558","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3K56 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H3-K56 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K56 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K56 specific)","type":"exact"}],"termid":"GO:0140765","terms_by_termid":{"GO:0140765":null}}


id: PBO:0030727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_organization","termid":"PBO:0030727"}


id: MONDO:0000959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"renal hypertension","termid":"MONDO:0001105"},{"relation_name":"is_a","term_name":"malignant hypertension","termid":"MONDO:0006846"},{"relation_name":"is_a","term_name":"hypertensive nephropathy","termid":"MONDO:0024633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"malignant hypertensive renal disease","secondary_identifiers":["UMLS:C0155593","ICD9:403.00","MEDGEN:510034","DOID:10177","SCTID:65443008"],"termid":"MONDO:0000959","xrefs":{"Monarch":{"xref_id":"0000959"}}}


id: PBO:0029507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_with_abnormal_shape","termid":"PBO:0029507"}


id: PBO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.2","termid":"PBO:0005037"}


id: PBO:0072359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 45","termid":"PBO:0072359"}


id: PBO:0028044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytoplasmic_microtubule_polymerization","termid":"PBO:0028044"}


id: PBO:0056286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEA divergent transcript","termid":"PBO:0056286"}


id: FYPO:0004534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus begins earlier than normal.","definition_xrefs":["PMID:16751704","PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"premature ascospore release from ascus","synonyms":[{"name":"accelerated ascospore release from ascus","type":"related"},{"name":"advanced ascospore release from ascus","type":"exact"}],"termid":"FYPO:0004534"}


id: PBO:0060173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated scaffold protein 2","termid":"PBO:0060173"}


id: GO:0071943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that consists of a heterodimer of the bHLH-ZIP proteins Myc and Max.","definition_xrefs":["PMID:16620027","PMID:16620031","GOC:cna","PMID:20170194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Myc-Max complex","termid":"GO:0071943"}


id: GO:0005476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine (mitochondrial) + O-acyl-L-carnitine (cytoplasm) = carnitine (cytoplasm) + O-acyl-L-carnitine (mitochondrial).","definition_xrefs":["PMID:9032458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transmembrane transporter activity","termid":"GO:0015226"},{"relation_name":"is_a","term_name":"O-acyl-L-carnitine transmembrane transporter activity","termid":"GO:0015227"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carnitine:O-acyl-L-carnitine antiporter activity","secondary_identifiers":["Reactome:R-HSA-200424"],"synonyms":[{"name":"carnitine/acyl carnitine carrier activity","type":"exact"},{"name":"carnitine:acyl carnitine carrier activity","type":"exact"},{"name":"fatty acyl carnitine carrier","type":"exact"}],"termid":"GO:0005476"}


id: PBO:0072965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1A member 1","termid":"PBO:0072965"}


id: PBO:0078662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 15-1","termid":"PBO:0078662"}


id: PBO:0057045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 134","termid":"PBO:0057045"}


id: MONDO:0006672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious or non-infectious inflammatory process that affects the glans penis. Symptoms include redness and pain of the glans penis and foreskin and discharge.","definition_xrefs":["NCIT:C26705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile disorder","termid":"MONDO:0002036"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanitis","secondary_identifiers":["SCTID:44882003","DOID:13033","ICD10CM:N48.1","ICD10WHO:N48.1","MEDGEN:14020","EFO:1000833","MedDRA:10004073","MESH:D001446","UMLS:C0004690"],"synonyms":[{"name":"balanitis","type":"exact"},{"name":"glans penis inflammation","type":"exact"},{"name":"inflammation of glans penis","type":"exact"}],"termid":"MONDO:0006672","xrefs":{"Monarch":{"xref_id":"0006672"}}}


id: PBO:0078120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-2","termid":"PBO:0078120"}


id: PBO:0082829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved protein involved in exocytic transport from the Golgi; mutation is synthetically lethal with apl2 vps1 double mutation; member of a protein superfamily with orthologs in diverse organisms; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0082829"}


id: PBO:0058582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715b","termid":"PBO:0058582"}


id: PBO:0029596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane_during_vegetative_growth","termid":"PBO:0029596"}


id: MONDO:0009396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism, neonatal self-limited primary, with hypercalciuria","secondary_identifiers":["MESH:C565496","MEDGEN:344611","UMLS:C1855924","OMIM:239199"],"synonyms":[{"name":"hyperparathyroidism, neonatal self-limited primary, with hypercalciuria","type":"exact"}],"termid":"MONDO:0009396","xrefs":{"Monarch":{"xref_id":"0009396"}}}


id: PBO:0063545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 4","termid":"PBO:0063545"}


id: PBO:0059786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 12","termid":"PBO:0059786"}


id: PBO:0047728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructosamine 3 kinase","termid":"PBO:0047728"}


id: GO:0098782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["PMID:25471887","PMID:25500157","PMID:22282805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mechanosensitive potassium channel activity","synonyms":[{"name":"mechanically-gated potassium channel activity","type":"exact"}],"termid":"GO:0098782"}


id: MONDO:0013349
data:
  {"annotated_genes":["SJAG_00747"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88818],"is_not":false,"summary":null,"term":"MONDO:0013349"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by facial dysmorphism (microcephaly, high forehead, low posterior hairline, strabismus), hypotonia, failure to thrive, intractable seizures, developmental delay, persistent vomiting and gastric bleeding. Additional features that may be observed include fat pads anomalies, inverted nipples, and body temperature oscillation. The disease is caused by mutations in the gene ALG11 (13q14.3).","definition_xrefs":["Orphanet:280071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"ALG11-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080567","MEDGEN:462263","OMIM:613661","GARD:12396","SCTID:733085004","UMLS:C3150913"],"synonyms":[{"name":"ALG11-CDG","type":"exact"},{"name":"ALG11-CDG (CDG-Ip)","type":"related"},{"name":"ALG11-congenital disorder of glycosylation","type":"exact"},{"name":"CDG syndrome type Ip","type":"exact"},{"name":"CDG-Ip","type":"exact"},{"name":"CDG1P","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ip","type":"exact"},{"name":"congenital disorder of glycosylation type 1p","type":"exact"},{"name":"congenital disorder of glycosylation type Ip","type":"exact"},{"name":"congenital disorder of glycosylation, type Ip","type":"related"}],"termid":"MONDO:0013349","terms_by_termid":{"MONDO:0013349":null},"xrefs":{"Monarch":{"xref_id":"0013349"}}}


id: PBO:0060141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR antisense RNA 1","termid":"PBO:0060141"}


id: GO:0008184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate.","definition_xrefs":["MetaCyc:GLYCOPHOSPHORYL-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"glycogen phosphorylase activity","secondary_identifiers":["Reactome:R-HSA-71515","Reactome:R-HSA-71590","Reactome:R-HSA-453339","Reactome:R-HSA-453358"],"termid":"GO:0008184"}


id: MONDO:0002077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"placenta praevia","termid":"MONDO:0005918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low implantation of placenta","secondary_identifiers":["MEDGEN:510322","SCTID:7792000","ICD9:641.0","UMLS:C0156617","DOID:1677"],"termid":"MONDO:0002077","xrefs":{"Monarch":{"xref_id":"0002077"}}}


id: PBO:0088391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX/TREX2 complex subunit Pci2","termid":"PBO:0088391"}


id: PBO:0062303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 14 pseudogene","termid":"PBO:0062303"}


id: PBO:0039067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase","termid":"PBO:0039067"}


id: GO:0009272
data:
  {"annotated_genes":["SJAG_03013","SJAG_01963","SJAG_04666","SJAG_00610","SJAG_02684","SJAG_02222","SJAG_04878","SJAG_04668","SJAG_04238","SJAG_04771","SJAG_02278","SJAG_04850","SJAG_05001","SJAG_04236","SJAG_02727","SJAG_03705","SJAG_02916","SJAG_01028","SJAG_00974","SJAG_01426","SJAG_04073","SJAG_04851","SJAG_04868","SJAG_01290","SJAG_04483","SJAG_01321","SJAG_00310","SJAG_01288","SJAG_00218","SJAG_01835","SJAG_01453","SJAG_03123","SJAG_00876","SJAG_01171","SJAG_02192","SJAG_00424","SJAG_04551","SJAG_00661","SJAG_03646","SJAG_03587","SJAG_04184","SJAG_03483","SJAG_03057","SJAG_05285","SJAG_05272"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71877,72218,72378,73047,76701,81082,95107,97034,102410,104250,119755],"is_not":false,"summary":null,"term":"GO:0009272"},{"annotations":[96240],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90472,92018,93546,89978],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74681],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[119630,115920,105966,110891,119638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"},{"annotations":[75037,73099,75209,80466,72312],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070600"},{"annotations":[93372,117660,74684,76200,77546,107912,115001,72740],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071970"},{"annotations":[104439,79915],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070880"},{"annotations":[103739,96884,103738,109883],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070879"},{"annotations":[94193,89279],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[91212,104646,96720,94199],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[101971,67857,103944],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032995"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a fungal-type cell wall. The fungal-type cell wall contains beta-glucan and may contain chitin.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"is_a","term_name":"fungal-type cell wall organization or biogenesis","termid":"GO:0071852"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00310":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00876":null,"SJAG_00974":null,"SJAG_01028":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_02727":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04868":null,"SJAG_04878":null,"SJAG_05001":null,"SJAG_05272":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"fungal-type cell wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"chitin- and beta-glucan-containing cell wall biogenesis","type":"narrow"},{"name":"fungal-type cell wall anabolism","type":"related"},{"name":"fungal-type cell wall biosynthetic process","type":"related"},{"name":"fungal-type cell wall formation","type":"related"},{"name":"fungal-type cell wall synthesis","type":"related"}],"termid":"GO:0009272","terms_by_termid":{"GO:0009272":null,"GO:0030476":null,"GO:0032995":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0075776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 5","termid":"PBO:0075776"}


id: PBO:0091536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TPM1","termid":"PBO:0091536"}


id: PBO:0029394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029394"}


id: PBO:0026832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_mating_type_region","termid":"PBO:0026832"}


id: PBO:0029968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_gamma_radiation","termid":"PBO:0029968"}


id: PBO:0074969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-11","termid":"PBO:0074969"}


id: PATO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000555 heat sensitive (obsolete PATO:0000555)","termid":"PATO:0000555"}


id: PBO:0029833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system","termid":"PBO:0029833"}


id: PBO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 7, pseudogene","termid":"PBO:0044794"}


id: MONDO:0030935
data:
  {"annotated_genes":["SJAG_07005"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87320],"is_not":false,"summary":null,"term":"MONDO:0030935"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex II deficiency, nuclear type","termid":"MONDO:0031230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 2 deficiency, nuclear type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16429","OMIM:619166","UMLS:C5436933","MEDGEN:1742371"],"synonyms":[{"name":"MC2DN2","type":"exact"},{"name":"mitochondrial complex 2 deficiency, nuclear type 2","type":"exact"},{"name":"mitochondrial complex II deficiency, nuclear type 2","type":"exact"}],"termid":"MONDO:0030935","terms_by_termid":{"MONDO:0030935":null},"xrefs":{"Monarch":{"xref_id":"0030935"}}}


id: PBO:0113193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major mitochondrial nuclease; has RNAse and DNA endo- and exonucleolytic activities; roles in mitochondrial recombination, apoptosis and maintenance of polyploidy; involved in fragmentation of genomic DNA during PND (programmed nuclear destruction); role in preventing L-A mycovirus pathogenesis; encodes ortholog of mammalian endoG","termid":"PBO:0113193"}


id: PBO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome","termid":"PBO:0000327"}


id: PBO:0013827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family Psl1 (predicted)","termid":"PBO:0013827"}


id: PBO:0043111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHUK divergent transcript","termid":"PBO:0043111"}


id: MONDO:0024236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder characterized by the progressive loss of function and/or structure of the affected tissues.","definition_xrefs":["NCIT:C27090"],"gene_count":0,"genotype_count":0,"name":"obsolete degenerative disorder (obsolete MONDO:0024236)","secondary_identifiers":["ICD9:796.4","SCTID:362975008"],"synonyms":[{"name":"degenerative disease","type":"exact"},{"name":"degenerative disorder","type":"exact"}],"termid":"MONDO:0024236","xrefs":{"Monarch":{"xref_id":"0024236"}}}


id: _global:edited_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_from","termid":"_global:edited_from"}


id: PBO:0034422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_cell_(obsolete_has_target_cell)","termid":"PBO:0034422"}


id: PBO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poikiloderma with neutropenia","termid":"PBO:0011982"}


id: PBO:0029510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_septated_cells_(obsolete_FYPO:0002204)","termid":"PBO:0029510"}


id: FYPO:0006363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle forms with microtubules emanating from only one pole during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:24954111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000120","FYPO:0001985"],"is_obsolete":false,"name":"monopolar spindle during meiosis I","synonyms":[{"name":"V-shaped spindle during meiosis I","type":"related"},{"name":"fan-shaped spindle during meiosis I","type":"exact"},{"name":"monopolar spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006363"}


id: GO:0071463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a humidity stimulus, moisture in the atmosphere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"},{"relation_name":"is_a","term_name":"cellular response to water stimulus","termid":"GO:0071462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to humidity","termid":"GO:0071463"}


id: GO:0035762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the dorsal motor nucleus of the vagus nerve is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}


id: PBO:0084310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isocitrate lyase; catalyzes the formation of succinate and glyoxylate from isocitrate, a key reaction of the glyoxylate cycle; expression of ICL1 is induced by growth on ethanol and repressed by growth on glucose","termid":"PBO:0084310"}


id: PBO:0083138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; induced by zinc deficiency; YHR214W-A has a paralog, YAR068W, that arose from a segmental duplication","termid":"PBO:0083138"}


id: PBO:0070800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 30","termid":"PBO:0070800"}


id: GO:0060957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an endocardial cell fate and its capacity to differentiate into an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell fate commitment","termid":"GO:0060839"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"endocardial cell differentiation","termid":"GO:0060956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell fate commitment","termid":"GO:0060957"}


id: PBO:0072110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 8","termid":"PBO:0072110"}


id: PR:Q9P7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.16c","secondary_identifiers":["UniProtKB:Q9P7K8"],"synonyms":[{"name":"Spom972h-SUPT4H1","type":"exact"},{"name":"chromatin elongation factor spt4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K8"}


id: FYPO:0007958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during miotic M phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}


id: PBO:0044897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPTOR antisense RNA 1","termid":"PBO:0044897"}


id: MONDO:0008102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sick sinus syndrome in which the cause of the disease is a mutation in the HCN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial sick sinus syndrome","termid":"MONDO:0012061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sick sinus syndrome 2, autosomal dominant","secondary_identifiers":["MEDGEN:320273","OMIM:163800","UMLS:C1834144","GARD:18284","MESH:C563513"],"synonyms":[{"name":"HCN4 sick sinus syndrome","type":"exact"},{"name":"SSS2","type":"related"},{"name":"Sss, autosomal dominant","type":"related"},{"name":"atrial fibrillation with Bradyarrhythmia","type":"related"},{"name":"sick sinus syndrome 2","type":"related"},{"name":"sick sinus syndrome 2 with or without Cardiac noncompaction and/Or ascending aorta dilation","type":"related"},{"name":"sick sinus syndrome 2, autosomal dominant","type":"exact"},{"name":"sick sinus syndrome caused by mutation in HCN4","type":"exact"},{"name":"sinus bradycardia syndrome, familial, autosomal dominant","type":"related"},{"name":"sinus node disease, familial, autosomal dominant","type":"related"}],"termid":"MONDO:0008102","xrefs":{"Monarch":{"xref_id":"0008102"}}}


id: GO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + Na+(out) = proline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"proline:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-444100","MetaCyc:TRANS-RXN-118","RHEA:28967"],"synonyms":[{"name":"sodium/proline symporter activity","type":"exact"}],"termid":"GO:0005298"}


id: PBO:0072271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23","termid":"PBO:0072271"}


id: PBO:0060245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC binding protein 2","termid":"PBO:0060245"}


id: MONDO:0012964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 15q is a rare chromosomal anomaly syndrome characterized by pre- and postnatal growth restriction, developmental delay, variable degrees of intellectual disability, hand and foot anomalies (e.g. brachy-/clinodactyly, talipes equinovarus, nail hypoplasia, proximally placed digits) and mild craniofacial dysmorphism (incl. microcephaly, triangular face, broad nasal bridge, micrognathia). Neonatal lymphedema, heart malformations, aplasia cutis congenita, aortic root dilatation, and autistic spectrum disorder have also been reported.","definition_xrefs":["Orphanet:1596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15q26-qter deletion syndrome","secondary_identifiers":["SCTID:766050000","UMLS:C2675463","DOID:0060397","GARD:16572","MEDGEN:390804","MESH:C567232","OMIM:612626"],"synonyms":[{"name":"15q26 deletion syndrome","type":"exact"},{"name":"Drayer syndrome","type":"exact"},{"name":"chromosome 15q26-qter deletion syndrome","type":"exact"},{"name":"chromosome 15q26-qter deletion syndrome, isolated cases","type":"exact"},{"name":"distal 15q deletion syndrome","type":"exact"},{"name":"distal monosomy 15q","type":"exact"},{"name":"distal monosomy type 15q","type":"exact"},{"name":"monosomy 15q26","type":"exact"},{"name":"telomeric 15q deletion syndrome","type":"exact"}],"termid":"MONDO:0012964","xrefs":{"Monarch":{"xref_id":"0012964"}}}


id: GO:0032372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"negatively_regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sterol transport","synonyms":[{"name":"down regulation of sterol transport","type":"exact"},{"name":"down-regulation of sterol transport","type":"exact"},{"name":"downregulation of sterol transport","type":"exact"},{"name":"inhibition of sterol transport","type":"narrow"}],"termid":"GO:0032372"}


id: FYPO:0006671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells fuse for a much shorter time than normal during mating, separate with incomplete exchange of cytosol contents, and the conjugation pore then reseals.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal cell fusion during mating","termid":"FYPO:0000412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"transient cell fusion during mating","synonyms":[{"name":"transient cell fusion during conjugation","type":"exact"},{"name":"transient cytogamy during conjugation","type":"exact"},{"name":"transient cytogamy during mating","type":"exact"}],"termid":"FYPO:0006671"}


id: MOD:01045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-dichloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichlorinated tyrosine","termid":"MOD:01037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-dichloro-L-tyrosine","synonyms":[{"name":"3',5'-Cl2Tyr","type":"exact"}],"termid":"MOD:01045"}


id: MONDO:1010128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the peritoneum (tissue that lines the abdominal wall and covers most of the organs in the abdomen).","direct_ancestors":[{"relation_name":"is_a","term_name":"serositis","termid":"MONDO:0043786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peritonitis","secondary_identifiers":["MEDGEN:14697","MESH:D010538","UMLS:C0031154","icd11.foundation:775356003"],"synonyms":[{"name":"peritoneum inflammation","type":"exact"}],"termid":"MONDO:1010128","xrefs":{"Monarch":{"xref_id":"1010128"}}}


id: MONDO:1012121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypothyroidism, non-human animal","termid":"MONDO:1011678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypothyroidism, dog","secondary_identifiers":["OMIA:000538-9615"],"termid":"MONDO:1012121","xrefs":{"Monarch":{"xref_id":"1012121"}}}


id: PBO:0091803
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2798041delT","termid":"PBO:0091803"}


id: FYPO:0002811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a non-ionic osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to osmotic stress","termid":"FYPO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to non-ionic osmotic stress","synonyms":[{"name":"decreased growth during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"hypersensitive to non-ionic osmotic stress","type":"exact"},{"name":"sensitive to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"sensitive to non-ionic osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002811"}


id: GO:2000223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in heart jogging.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in heart jogging (obsolete GO:2000223)","synonyms":[{"name":"regulation of BMP signalling pathway involved in heart jogging pathway involved in somitogenesis","type":"exact"}],"termid":"GO:2000223"}


id: PBO:0067375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 477, pseudogene","termid":"PBO:0067375"}


id: PBO:0058399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4771-1","termid":"PBO:0058399"}


id: PBO:0062176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily M member 1","termid":"PBO:0062176"}


id: PBO:0017946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam8","termid":"PBO:0017946"}


id: PBO:0039545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 42","termid":"PBO:0039545"}


id: PBO:0080180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 1","termid":"PBO:0080180"}


id: PBO:0051020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGFBP5 antisense RNA 1","termid":"PBO:0051020"}


id: PBO:0060451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine kinase","termid":"PBO:0060451"}


id: PBO:0071155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 20","termid":"PBO:0071155"}


id: PBO:0055506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2940","termid":"PBO:0055506"}


id: PBO:0120236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Zas1 OR transcription regulator Zas1","termid":"PBO:0120236"}


id: PBO:0039630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A13","termid":"PBO:0039630"}


id: MONDO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the gallbladder. It is characterized by the presence of extracellular mucin that constitutes more than fifty-percent of the tumor.","definition_xrefs":["NCIT:C5744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"gallbladder adenocarcinoma","termid":"MONDO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"gallbladder mucinous adenocarcinoma","secondary_identifiers":["DOID:6998","UMLS:C1333750","MEDGEN:234292"],"synonyms":[{"name":"colloid carcinoma of gallbladder","type":"exact"},{"name":"colloid carcinoma of the gallbladder","type":"exact"},{"name":"colloidal carcinoma of gallbladder","type":"exact"},{"name":"colloidal carcinoma of the gallbladder","type":"exact"},{"name":"gall bladder mucinous adenocarcinoma","type":"exact"},{"name":"gallbladder colloid carcinoma","type":"exact"},{"name":"gallbladder colloidal carcinoma","type":"exact"},{"name":"gallbladder mucinous adenocarcinoma","type":"exact"},{"name":"gallbladder mucinous carcinoma","type":"related"},{"name":"mucinous carcinoma of gallbladder","type":"exact"},{"name":"mucinous carcinoma of the gallbladder","type":"exact"}],"termid":"MONDO:0004067","xrefs":{"Monarch":{"xref_id":"0004067"}}}


id: PBO:0052650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 18","termid":"PBO:0052650"}


id: MONDO:0030043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type iit","secondary_identifiers":["MEDGEN:1709627","OMIM:618885","UMLS:C5394387"],"synonyms":[{"name":"CDG2T","type":"exact"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIt","type":"exact"},{"name":"Cdg Iit","type":"exact"}],"termid":"MONDO:0030043","xrefs":{"Monarch":{"xref_id":"0030043"}}}


id: GO:0010387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a COP9 signalosome.","definition_xrefs":["PMID:17307927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"COP9 signalosome assembly","synonyms":[{"name":"signalosome assembly","type":"broad"}],"termid":"GO:0010387"}


id: PBO:0086512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; deletion decreases transcription of downstream gene ALD6; YPL062W is not an essential gene; null mutant shows decrease in terpenoid production; homozygous diploid mutant shows a decrease in glycogen accumulation","termid":"PBO:0086512"}


id: GO:1990585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-4-hydroxy-L-prolyl-[protein] + UDP-beta-L-arabinofuranose = H+ + O-(beta-L-arabinofuranosyl)-trans-4-hydroxy-L-prolyl-[protein] + UDP.","definition_xrefs":["RHEA:49472","PMID:24036508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"hydroxyproline O-arabinosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15011","EC:2.4.2.58"],"synonyms":[{"name":"HPAT","type":"exact"}],"termid":"GO:1990585"}


id: GO:0102828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: stachyose + alpha-D-galactosyl-(1->3)-1D-myo-inositol = verbascose + myo-inositol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete stachyose galactinol:verbascose galactosyltransferase activity (obsolete GO:0102828)","termid":"GO:0102828"}


id: GO:0008794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arsenate + reduced glutaredoxin = arsenite + oxidized glutaredoxin. Glutaredoxin functions as the electron donor for arsenate reduction. The electron flow therefore is ( NADPH -> glutathione reductase (EC:1.6.4.2) -> ) glutathione -> glutaredoxin -> arsenate reductase, i.e. glutathione is reduced by glutathione reductase and glutaredoxin is reduced by glutathione.","definition_xrefs":["GOC:kd","EC:1.20.4.1","PMID:10593884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor","termid":"GO:0030614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arsenate reductase (glutaredoxin) activity","secondary_identifiers":["MetaCyc:RXN-982","RHEA:22016","UM-BBD_reactionID:r0635"],"synonyms":[{"name":"glutharedoxin:arsenate oxidoreductase activity","type":"related"}],"termid":"GO:0008794"}


id: GO:0022858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alanine from one side of a membrane to the other. Alanine is 2-aminopropanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"alanine transmembrane transporter activity","termid":"GO:0022858"}


id: PBO:0059666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 32","termid":"PBO:0059666"}


id: GO:0006473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein acetylation","synonyms":[{"name":"protein amino acid acetylation","type":"exact"}],"termid":"GO:0006473"}


id: GO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GO_REF:0000022","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell activation involved in immune response","synonyms":[{"name":"cell activation during immune response","type":"related"}],"termid":"GO:0002263"}


id: PBO:0055044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2459","termid":"PBO:0055044"}


id: MOD:01177
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 1'-(1,2,3-trihydroxyprop-2-yl)-L-histidine.","definition_xrefs":["PubMed:16760471","RESID:AA0431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(1,2,3-trihydroxyprop-2-yl)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-[1-(1,2,3-trihydroxypropan-2-yl)-1H-imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(1,2,3-trihydroxyprop-2-yl)-L-histidine","type":"exact"},{"name":"1-[1,2-dihydroxy-1-(hydroxymethyl)ethyl]-L-histidine","type":"exact"},{"name":"MOD_RES Tele-(1,2,3-trihydroxypropan-2-yl)histidine","type":"exact"},{"name":"N(epsilon)-histidine dihydroxyacetone adduct","type":"exact"},{"name":"N(tau)-(1,2,3-trihydroxypropan-2-yl)histidine","type":"exact"},{"name":"NtauDHAHis","type":"exact"},{"name":"tele-(1,2,3-trihydroxypropan-2-yl)histidine","type":"exact"}],"termid":"MOD:01177"}


id: MONDO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aggressive nodal or extranodal mature (peripheral) T-cell lymphomas that do not belong to the better defined entities of the remainder of mature T-cell lymphomas. This category includes the following variants: lymphoepithelioid cell variant (Lennert's lymphoma), follicular variant, and T-zone variant.","definition_xrefs":["NCIT:C4340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"neoplasm of mature T-cells or NK-cells","termid":"MONDO:0005169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"peripheral T-cell lymphoma, not otherwise specified","secondary_identifiers":["NANDO:2200028","ONCOTREE:PTCL","EFO:0000211","icd11.foundation:855224800"],"synonyms":[{"name":"PTCL","type":"related"},{"name":"peripheral T-cell lymphoma, not otherwise specified","type":"exact"}],"termid":"MONDO:0004964","xrefs":{"Monarch":{"xref_id":"0004964"}}}


id: PBO:0065821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5C, member RAS oncogene family","termid":"PBO:0065821"}


id: PBO:0003012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo/keto reductase family protein","termid":"PBO:0003012"}


id: PBO:0043782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase B1","termid":"PBO:0043782"}


id: MONDO:0013990
data:
  {"annotated_genes":["SJAG_00900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88800],"is_not":false,"summary":null,"term":"MONDO:0013990"}]},"cv_name":"mondo","definition":"A novel very rare form of pontocerebellar hypoplasia (see this term) characterized clinically by progressive microencephaly, feeding difficulties, severe developmental delay, although walking may be achieved, hypotonia often associated with increased muscle tone of lower extremities and deep tendon reflexes, joint deformities in the lower extremities, and occasionally complex seizures. PCH8 is caused by a loss-of-function mutation in the CHMP1A gene. MRI demonstrates a pontocerebellar hypoplasia with vermis and hemispheres equally affected and mild to severely reduced cerebral white matter volume with a fully formed very thin corpus callosum.","definition_xrefs":["Orphanet:324569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00900":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17488","UMLS:C3554209","DOID:0060277","SCTID:718611007","MEDGEN:767123","OMIM:614961"],"synonyms":[{"name":"CHMP1A non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"PCH8","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in CHMP1A","type":"exact"},{"name":"pontocerebellar hypoplasia due to CHMP1A mutation","type":"exact"},{"name":"pontocerebellar hypoplasia type 8","type":"exact"},{"name":"pontocerebellar hypoplasia, type 8","type":"related"}],"termid":"MONDO:0013990","terms_by_termid":{"MONDO:0013990":null},"xrefs":{"Monarch":{"xref_id":"0013990"}}}


id: FYPO:0007144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of deoxyribonuclease (pyrimidine dimer) activity is increased during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"},{"relation_name":"is_a","term_name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","synonyms":[{"name":"increased 5'-deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","type":"narrow"},{"name":"increased deoxyribonuclease (pyrimidine dimer) activity during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0007144"}


id: FYECO:0000207
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[121312,121324,121220,121228,121201,121216],"is_not":false,"summary":null,"term":"FYECO:0000207"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which potassium chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00610":null,"SJAG_02592":null,"SJAG_04551":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ KCl","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266","SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pmk1delta","pck2delta","atf1delta","sty1delta"],"synonyms":[{"name":"potassium chloride added","type":"exact"}],"termid":"FYECO:0000207","terms_by_termid":{"FYECO:0000207":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0010313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phytochrome.","definition_xrefs":["PMID:15486102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"phytochrome binding","termid":"GO:0010313"}


id: PBO:0046750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 5","termid":"PBO:0046750"}


id: MONDO:0017811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disease in which the cause of the disease is a 5q31.3 deletion encompassing all or part of PURA gene.","definition_xrefs":["PMID:28448108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"},{"relation_name":"is_a","term_name":"PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome","termid":"MONDO:1060108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"severe neonatal hypotonia-seizures-encephalopathy syndrome due to 5q31.3 microdeletion","secondary_identifiers":["SCTID:768555009","Orphanet:314655","GARD:21383","MEDGEN:1636705","UMLS:C4708510"],"synonyms":[{"name":"5q31.3 microdeletion syndrome","type":"exact"},{"name":"Del(5)(q31.3)","type":"exact"},{"name":"monosomy 5q31.3","type":"exact"}],"termid":"MONDO:0017811","xrefs":{"Monarch":{"xref_id":"0017811"}}}


id: GO:0034957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-nitrophenol + 2 NADH + 2 H+ = 3-hydroxyaminophenol + 2 NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-nitrophenol nitroreductase activity (obsolete GO:0034957)","termid":"GO:0034957"}


id: GO:0038105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a transforming growth factor-beta (TGFbeta) protein in the extracellular region, and inhibiting TGFbeta signaling by preventing TGFbeta from binding to its cell surface receptor.","definition_xrefs":["GOC:signaling","PMID:19855014","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of TGFbeta from receptor via TGFbeta binding","synonyms":[{"name":"extracellular sequestering of TGFbeta","type":"broad"},{"name":"extracellular sequestering of transforming growth factor-beta","type":"broad"}],"termid":"GO:0038105"}


id: GO:0075115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075115)","synonyms":[{"name":"modulation by symbiont of host transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075115"}


id: GO:1990646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prolactin stimulus.","definition_xrefs":["PMID:7760850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to prolactin","termid":"GO:1990637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prolactin","termid":"GO:1990646"}


id: PBO:0068459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 35, pseudogene","termid":"PBO:0068459"}


id: MONDO:0009974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Hemophagocytic lymphohistiocytosis (FHL) is a rare primary immunodeficiency characterized by a macrophage activation syndrome with an onset usually occurring within a few months or less common several years after birth.","definition_xrefs":["Orphanet:540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial hemophagocytic lymphohistiocytosis type 1","secondary_identifiers":["MEDGEN:1642840","UMLS:C4551514","NCIT:C61276","OMIM:267700","MedDRA:10070904","DOID:0110921"],"synonyms":[{"name":"Erythrophagocytic lymphohistiocytosis, familial","type":"related"},{"name":"FHL1","type":"exact"},{"name":"HLH1","type":"exact"},{"name":"HPLH1","type":"exact"},{"name":"Hlh1","type":"related"},{"name":"Hplh1","type":"related"},{"name":"familial HLH","type":"exact"},{"name":"familial hemophagocytic lymphohistiocytosis","type":"broad"},{"name":"familial hemophagocytic lymphohistiocytosis 1","type":"related"},{"name":"familial hemophagocytic lymphohistiocytosis type 1","type":"exact"},{"name":"hemophagocytic lymphohistiocytosis, familial","type":"related"},{"name":"hemophagocytic lymphohistiocytosis, familial, 1","type":"related"},{"name":"hemophagocytic reticulosis, familial","type":"related"},{"name":"reticulosis, familial histiocytic","type":"related"}],"termid":"MONDO:0009974","xrefs":{"Monarch":{"xref_id":"0009974"}}}


id: GO:0071142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a single type of SMAD family proteins. In the absence of Smad4, phosphorylation of R-SMADs results in their homotrimerization. However, these complexes do not appear to import into the nucleus and are assumed to be transcriptionally inactive.","definition_xrefs":["GOC:bhm","GOC:mah","PMID:11779505","PMID:16322555","PMID:9670020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD protein complex","termid":"GO:0071141"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"homomeric SMAD protein complex","secondary_identifiers":["GO:0071143"],"synonyms":[{"name":"SMAD1 homotrimer complex","type":"narrow"},{"name":"SMAD1 protein complex","type":"narrow"},{"name":"SMAD2 homotrimer complex","type":"narrow"},{"name":"SMAD2 protein complex","type":"narrow"},{"name":"SMAD3 homotrimer complex","type":"narrow"},{"name":"SMAD3 protein complex","type":"narrow"}],"termid":"GO:0071142"}


id: GO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephron are generated and organized. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron morphogenesis","termid":"GO:0072028"}


id: FYPO:0004650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule in the mitotic spindle, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule depolymerization during vegetative growth","termid":"FYPO:0005682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic spindle microtubule depolymerization","synonyms":[{"name":"decreased mitotic spindle microtubule catastrophe","type":"related"},{"name":"decreased mitotic spindle microtubule depolymerisation","type":"exact"},{"name":"decreased mitotic spindle microtubule depolymerization during vegetative growth","type":"exact"},{"name":"decreased mitotic spindle microtubule shrinkage","type":"related"},{"name":"decreased spindle microtubule depolymerization during mitotic cell cycle","type":"exact"},{"name":"reduced mitotic spindle microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004650"}


id: GO:0033322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-homomethionine, a non-protein amino acid synthesized from L-methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-homomethionine biosynthetic process","synonyms":[{"name":"homomethionine anabolism","type":"exact"},{"name":"homomethionine biosynthesis","type":"exact"},{"name":"homomethionine biosynthetic process","type":"exact"},{"name":"homomethionine formation","type":"exact"},{"name":"homomethionine synthesis","type":"exact"}],"termid":"GO:0033322"}


id: PBO:0058442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5007","termid":"PBO:0058442"}


id: PBO:0046206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 3","termid":"PBO:0046206"}


id: PR:O13689
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11E3.10 gene.","definition_xrefs":["UniProtKB:O13689","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11E3.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.10","synonyms":[{"name":"Spom972h-SPAC11E3.10","type":"exact"}],"termid":"PR:O13689"}


