# terms

id: GO:0034270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the Cvt pathway. In budding yeast, the Cvt complex consists of multimers of preApe1p.","definition_xrefs":["GOC:rb","PMID:15659643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cvt complex","synonyms":[{"name":"cytoplasm to vacuole targeting complex","type":"exact"},{"name":"cytoplasm-to-vacuole targeting complex","type":"exact"}],"termid":"GO:0034270"}


id: FYPO:0003683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of spliceosomal complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal spliceosomal complex assembly","synonyms":[{"name":"abnormal spliceosomal complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spliceosomal complex assembly during vegetative growth","type":"exact"},{"name":"abnormal spliceosome assembly","type":"broad"}],"termid":"FYPO:0003683"}


id: MONDO:0001475
data:
  {"annotated_genes":["SJAG_01759","SJAG_02208","SJAG_03089","SJAG_02453","SJAG_03889","SJAG_01732","SJAG_02330","SJAG_01798","SJAG_03684"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014118"},{"annotations":[87716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[87977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957809"},{"annotations":[87836,87837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958017"},{"annotations":[88436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032899"},{"annotations":[88532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"},{"annotations":[87440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012559"},{"annotations":[88372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010294"}]},"cv_name":"mondo","definition":"A decrease in the number of neutrophils found in the blood.","definition_xrefs":["MESH:D009503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agranulocytosis","termid":"MONDO:0001609"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01759":null,"SJAG_01798":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02453":null,"SJAG_03089":null,"SJAG_03684":null,"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutropenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:288.00","UMLS:C0853697","DOID:1227","HP:0001875","ICD9:288.0","MEDGEN:163121","SCTID:303011007"],"synonyms":[{"name":"neutropenia","type":"exact"},{"name":"neutropenic disorder","type":"exact"}],"termid":"MONDO:0001475","terms_by_termid":{"MONDO:0010294":null,"MONDO:0011405":null,"MONDO:0011997":null,"MONDO:0012559":null,"MONDO:0014118":null,"MONDO:0032899":null,"MONDO:0957809":null,"MONDO:0958017":null},"xrefs":{"Monarch":{"xref_id":"0001475"}}}


id: PBO:0043708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 5","termid":"PBO:0043708"}


id: GO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pollen tube growth.","definition_xrefs":["PMID:19208902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"pollen tube growth","termid":"GO:0009860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pollen tube growth","termid":"GO:0080092"}


id: PBO:0003575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap109","termid":"PBO:0003575"}


id: PBO:0065772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Q-nucleotide N-glycosylase 1","termid":"PBO:0065772"}


id: PBO:0028774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_nitroprusside","termid":"PBO:0028774"}


id: MOD:01108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid, glutamtic acid anisole adduct.","definition_xrefs":["DeltaMass:259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"anisyl modified residue","termid":"MOD:01007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-5-(4-methoxyphenyl)-5-oxopentanoic acid (Glu)","synonyms":[{"name":"anisole adducted glutamyl","type":"exact"}],"termid":"MOD:01108"}


id: FYPO:0007799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the cell surface is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to cell surface during vegetative growth","synonyms":[{"name":"ectopic protein localization to cell surface during vegetative growth","type":"exact"},{"name":"protein mislocalised to cell surface during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell surface during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007799"}


id: PBO:0065442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 1","termid":"PBO:0065442"}


id: PBO:0030135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zinc_starvation","termid":"PBO:0030135"}


id: PBO:0057023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-1","termid":"PBO:0057023"}


id: GO:1905130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carcinine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dph","PMID:26653853","PMID:26713872","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"carcinine import across plasma membrane","termid":"GO:1905130"}


id: GO:0009753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid","synonyms":[{"name":"response to jasmonic acid stimulus","type":"exact"}],"termid":"GO:0009753"}


id: PBO:0061969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AH member 1 pseudogene","termid":"PBO:0061969"}


id: GO:0016087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of ecdysiostatic hormone, a peptide hormone that inhibits ecdysone secretion.","definition_xrefs":["DOI:10.1002/(SICI)1520-6327(1997)35:1","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0098772","GO:0005488","GO:0140677"],"is_obsolete":false,"name":"ecdysiostatic hormone activity","termid":"GO:0016087"}


id: MOD:01015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an isovaline.","definition_xrefs":["DeltaMass:110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isovaline residue (Iva)","synonyms":[{"name":"2-amino-2-methylbutanoic acid","type":"exact"},{"name":"Isovalyl (-I-,-Iva-)","type":"exact"},{"name":"Iva","type":"exact"}],"termid":"MOD:01015"}


id: MONDO:1040026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that has spread to the brain from another anatomic site.","definition_xrefs":["PMID:29262201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the brain","secondary_identifiers":["MEDGEN:113095","UMLS:C0220650"],"termid":"MONDO:1040026","xrefs":{"Monarch":{"xref_id":"1040026"}}}


id: PBO:0069676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 953, pseudogene","termid":"PBO:0069676"}


id: FYPO:0002545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea (obsolete FYPO:0002545)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to HU","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during cellular response to hydroxyurea","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002545"}


id: PBO:0117150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNKL antisense RNA 1","termid":"PBO:0117150"}


id: PBO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A2","termid":"PBO:0046197"}


id: PR:O94713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.14c","synonyms":[{"name":"Spom972h-meu27","type":"exact"}],"termid":"PR:O94713"}


id: PBO:0087093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L8A; required for processing of 27SA3 pre-rRNA to 27SB during assembly of large subunit; binds Domain I of 25S, 5.8 S rRNAs; mutation results in decreased amounts of free 60S subunits; RPL8B has paralog RPL8A from whole genome duplication; RPL8A or RPL8B ribosomes not functionally interchangeable; proportions of Rpl8ap, Rpl8bp in 80S ribosome differ in glucose and glycerol; homologous to mammalian ribosomal protein L7A, no bacterial homolog","termid":"PBO:0087093"}


id: PBO:0114292
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein","termid":"PBO:0114292"}


id: MONDO:0019063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare circulatory system disease (obsolete MONDO:0020015)","termid":"MONDO:0020015"}],"gene_count":0,"genotype_count":0,"name":"obsolete vascular anomaly (obsolete MONDO:0019063)","secondary_identifiers":["Orphanet:68419"],"synonyms":[{"name":"vascular anomaly or angioma","type":"related"}],"termid":"MONDO:0019063","xrefs":{"Monarch":{"xref_id":"0019063"}}}


id: PBO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.3.1","termid":"PBO:0004847"}


id: PATO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a sinuate margin and rippled surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undulate","secondary_identifiers":["PATO:0001610","PATO:0001939"],"synonyms":[{"name":"rippled","type":"related"},{"name":"sinuate","type":"related"},{"name":"undulated","type":"exact"},{"name":"undulating","type":"exact"},{"name":"waved","type":"exact"},{"name":"wavy","type":"exact"}],"termid":"PATO:0000967"}


id: PR:Q10489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 component subunit alpha, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.03","secondary_identifiers":["UniProtKB:Q10489"],"synonyms":[{"name":"PDHE1-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.03","type":"related"},{"name":"Spom972h-PDHA2","type":"exact"}],"termid":"PR:Q10489"}


id: PBO:0091139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein","termid":"PBO:0091139"}


id: GO:0060210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which there is subsiding follicular function.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metestrus","termid":"GO:0060210"}


id: PBO:0068629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 9, pseudogene","termid":"PBO:0068629"}


id: PR:O94246
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase regulatory subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13295:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.06c","secondary_identifiers":["UniProtKB:O94246"],"synonyms":[{"name":"GCS light chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLM","type":"exact"},{"name":"gamma-ECS regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate--cysteine ligase modifier subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94246"}


id: GO:0009437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine metabolic process","synonyms":[{"name":"carnitine metabolism","type":"exact"},{"name":"vitamin Bt metabolic process","type":"exact"},{"name":"vitamin Bt metabolism","type":"exact"}],"termid":"GO:0009437"}


id: PBO:0075610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speckle type BTB/POZ protein like","termid":"PBO:0075610"}


id: GO:0032594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein from one location to another within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"protein transport within lipid bilayer","synonyms":[{"name":"protein translocation within membrane","type":"exact"},{"name":"receptor translocation within membrane","type":"narrow"},{"name":"receptor transport within lipid bilayer","type":"narrow"}],"termid":"GO:0032594"}


id: PBO:0066943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 245","termid":"PBO:0066943"}


id: GO:0106419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-lipoyl-L-lysyl-[protein] + H2O + NAD+ = 2''-O-lipoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:25525879","RHEA:63640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent protein lipoamidase activity","secondary_identifiers":["EC:2.3.1.313","MetaCyc:RXN-22964"],"termid":"GO:0106419"}


id: MONDO:0005947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia caused by infection with bacteria of the family rickettsiaceae.","definition_xrefs":["MESH:D011022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"pneumonia caused by gram negative bacteria","termid":"MONDO:0041850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickettsial pneumonia","secondary_identifiers":["UMLS:C0032307","ICD9:484.8","SCTID:233621003","MEDGEN:45973"],"synonyms":[{"name":"Rickettsiaceae caused pneumonia","type":"exact"},{"name":"Rickettsiaceae pneumonia","type":"exact"}],"termid":"MONDO:0005947","xrefs":{"Monarch":{"xref_id":"0005947"}}}


id: GO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus is received by a cell and converted into a molecular signal; cAMP is the nucleotide cyclic AMP.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to cAMP","termid":"GO:0051591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cAMP","synonyms":[{"name":"3',5'-cAMP detection","type":"exact"},{"name":"3',5'-cAMP sensing","type":"exact"},{"name":"cAMP detection","type":"exact"},{"name":"cAMP sensing","type":"exact"},{"name":"cyclic AMP detection","type":"exact"},{"name":"detection of 3',5' cAMP","type":"exact"},{"name":"detection of 3',5'-cAMP","type":"exact"},{"name":"detection of adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"detection of cyclic AMP","type":"exact"}],"termid":"GO:0031319"}


id: MONDO:0016755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.","definition_xrefs":["NCIT:C3272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"benign peripheral nerve sheath tumor","termid":"MONDO:0016752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibroma","secondary_identifiers":["UMLS:C0027830","ONCOTREE:NFIB","MESH:D009455","ICD9:215.9","DOID:962","GARD:7191","MEDGEN:45058","MedDRA:10029267","ICDO:9540/0","Orphanet:252183","icd11.foundation:221014277","SCTID:404029005"],"synonyms":[{"name":"NFIB","type":"related"},{"name":"neurofibroma","type":"exact"},{"name":"neurofibroma (WHO grade I)","type":"exact"},{"name":"neurofibroma, benign","type":"exact"}],"termid":"MONDO:0016755","xrefs":{"Monarch":{"xref_id":"0016755"}}}


id: PBO:0091958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal51","termid":"PBO:0091958"}


id: MONDO:0013409
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89116],"is_not":false,"summary":null,"term":"MONDO:0013409"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing age related macular degeneration in which the cause of the disease is a mutation in the ERCC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"age-related macular degeneration","termid":"MONDO:0005150"},{"relation_name":"is_a","term_name":"age related macular degeneration, susceptibility to","termid":"MONDO:0100174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"age related macular degeneration 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3151063","OMIM:613761","DOID:0110028","MEDGEN:462413"],"synonyms":[{"name":"ARMD5","type":"exact"},{"name":"ERCC6 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 5","type":"exact"},{"name":"age-related macular degeneration caused by mutation in ERCC6","type":"exact"},{"name":"macular Degeneration, age-related, type 5","type":"exact"},{"name":"macular degeneration, age-related, 5","type":"related"},{"name":"macular degeneration, age-related, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0013409","terms_by_termid":{"MONDO:0013409":null},"xrefs":{"Monarch":{"xref_id":"0013409"}}}


id: GO:0019159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-ribonucleotide + H2O = beta-nicotinate D-ribonucleotide + NH3.","definition_xrefs":["EC:3.5.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nicotinamide-nucleotide amidase activity","secondary_identifiers":["MetaCyc:NMNAMIDOHYDRO-RXN","RHEA:12400"],"synonyms":[{"name":"NMN amidohydrolase","type":"narrow"},{"name":"NMN deamidase activity","type":"related"},{"name":"nicotinamide mononucleotide amidohydrolase activity","type":"related"},{"name":"nicotinamide mononucleotide deamidase activity","type":"related"},{"name":"nicotinamide-D-ribonucleotide amidohydrolase activity","type":"related"}],"termid":"GO:0019159"}


id: PBO:0085434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; transcription of TPO2 is regulated by Haa1p; TPO2 has a paralog, TPO3, that arose from the whole genome duplication","termid":"PBO:0085434"}


id: PBO:0112956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored cell surface receptor L domain-like Ecm33","termid":"PBO:0112956"}


id: GO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.","definition_xrefs":["ISBN:0878932453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiogenesis","secondary_identifiers":["Wikipedia:Angiogenesis"],"synonyms":[{"name":"blood vessel formation from pre-existing blood vessels","type":"exact"}],"termid":"GO:0001525"}


id: GO:0034999
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An oligosaccharyltransferase (OST) complex that contains the seven polypeptides found in OST complex I, plus heterotrimeric Sec61alpha-beta-gamma. Of the three forms of mammalian OST complexes identified, the OSTII complex has intermediate affinity for ribosomes.","definition_xrefs":["GOC:BHF","PMID:15835887"],"gene_count":0,"genotype_count":0,"name":"obsolete oligosaccharyltransferase II complex (obsolete GO:0034999)","synonyms":[{"name":"OSTCII","type":"exact"}],"termid":"GO:0034999"}


id: PBO:0076125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine kinase 1","termid":"PBO:0076125"}


id: PBO:0041473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 52","termid":"PBO:0041473"}


id: PBO:0029570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore","termid":"PBO:0029570"}


id: PBO:0089953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dhx37","termid":"PBO:0089953"}


id: FYPO:0003388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biotin import","termid":"FYPO:0001744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased biotin import","synonyms":[{"name":"decreased biotin import across plasma membrane","type":"exact"},{"name":"decreased biotin import during mitotic cell cycle","type":"related"},{"name":"decreased biotin import during vegetative growth","type":"exact"},{"name":"decreased biotin import into cell","type":"exact"},{"name":"decreased biotin uptake","type":"exact"},{"name":"reduced biotin import","type":"exact"}],"termid":"FYPO:0003388"}


id: GO:0061264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell fate commitment","termid":"GO:0061264"}


id: FYPO:0004720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah","PMID:11711540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to heat shock","synonyms":[{"name":"normal cell population viability following heat shock","type":"exact"}],"termid":"FYPO:0004720"}


id: PBO:0073286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 7","termid":"PBO:0073286"}


id: PBO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional enzyme","termid":"PBO:0003273"}


id: GO:0075085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075085)","synonyms":[{"name":"activation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"positive regulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"},{"name":"promotion by host of symbiont transmembrane receptor protein activity involved in cAMP-mediated signal transduction","type":"exact"},{"name":"stimulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"upregulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"exact"}],"termid":"GO:0075085"}


id: MONDO:0012400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the CNTNAP2 gene, encoding contactin-associated protein-like 2. It is characterized by normal development until the onset of intractable focal seizures at age 1-9. After the onset of seizures, language regression, intellectual disability, hyperactivity, and impulsive behaviors begin to occur. The majority of children eventually fulfill the criteria for autism spectrum disorder.","definition_xrefs":["NCIT:C133743"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Pitt-Hopkins-like syndrome","termid":"MONDO:0016377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia-focal epilepsy syndrome","secondary_identifiers":["DOID:0090130","OMIM:610042","MEDGEN:413258","UMLS:C2750246","GARD:16997","MESH:C567657","Orphanet:163681"],"synonyms":[{"name":"CDFE syndrome","type":"exact"},{"name":"CDFES","type":"exact"},{"name":"PTHSL1","type":"related"},{"name":"Pitt-Hopkins like syndrome 1","type":"exact"},{"name":"Pitt-Hopkins-like syndrome 1","type":"related"},{"name":"cortical dysplasia-focal epilepsy syndrome","type":"exact"}],"termid":"MONDO:0012400","xrefs":{"Monarch":{"xref_id":"0012400"}}}


id: MONDO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acquired tear duct stenosis","secondary_identifiers":["ICD9:375.56","ICD10CM:H04.55","DOID:13655","MEDGEN:509872","SCTID:193995004","UMLS:C0155248"],"synonyms":[{"name":"acquired nasolacrimal duct stenosis","type":"exact"},{"name":"acquired stenosis of nasolacrimal duct","type":"exact"},{"name":"stenosis of nasolacrimal duct, acquired","type":"exact"},{"name":"tear duct - acquired stenosis","type":"exact"}],"termid":"MONDO:0001769","xrefs":{"Monarch":{"xref_id":"0001769"}}}


id: PBO:0048895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 16, pseudogene","termid":"PBO:0048895"}


id: PBO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein Mam3","termid":"PBO:0001214"}


id: PBO:0080695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 2B","termid":"PBO:0080695"}


id: GO:0035637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information occurring at the level of a multicellular organism.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organismal signaling (obsolete GO:0035637)","synonyms":[{"name":"multicellular organismal signalling","type":"exact"}],"termid":"GO:0035637"}


id: PBO:0109259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120 member B","termid":"PBO:0109259"}


id: GO:2000906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"positively_regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of starch metabolic process","synonyms":[{"name":"positive regulation of starch metabolism","type":"exact"}],"termid":"GO:2000906"}


id: PBO:0077135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR signaling pathway regulator","termid":"PBO:0077135"}


id: PBO:0029431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029431"}


id: PBO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centlein","termid":"PBO:0043491"}


id: MONDO:0008675
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88942,88943],"is_not":false,"summary":null,"term":"MONDO:0008675"}]},"cv_name":"mondo","definition":"A very rare, multiple congenital contractures syndrome characterized by a microstomia with a whistling appearance of the mouth, distinctive facies, club foot and joint contractures. FSS is the most severe form of distal arthrogryposis.","definition_xrefs":["Orphanet:2053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"Freeman-Sheldon syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1314169421","SCTID:52616002","UMLS:C0265224","OMIM:193700","DOID:0111604","MESH:C535483","MEDGEN:120516","NORD:1161","NCIT:C98931","GARD:6466","DOID:0111605"],"synonyms":[{"name":"Craniocarpotarsal dysplasia","type":"exact"},{"name":"Craniocarpotarsal dystrophy","type":"exact"},{"name":"DA2A","type":"related"},{"name":"FSS","type":"related"},{"name":"Freeman Sheldon Syndrome","type":"exact"},{"name":"Freeman Sheldon syndrome","type":"exact"},{"name":"Freeman-Sheldon syndrome","type":"exact"},{"name":"arthrogryposis distal type 2A","type":"related"},{"name":"arthrogryposis, distal, type 2A","type":"related"},{"name":"arthrogryposis, distal, type 2A (Freeman-Sheldon)","type":"exact"},{"name":"cranio-carpo-tarsal syndrome","type":"exact"},{"name":"craniocarpotarsal dysplasia","type":"exact"},{"name":"craniocarpotarsal dystrophy","type":"exact"},{"name":"distal arthrogryposis type 2A","type":"exact"},{"name":"whistling face syndrome","type":"exact"},{"name":"whistling face-windmill vane hand syndrome","type":"exact"},{"name":"whistling-face syndrome","type":"exact"},{"name":"windmill-vane-hand syndrome","type":"exact"}],"termid":"MONDO:0008675","terms_by_termid":{"MONDO:0008675":null},"xrefs":{"Monarch":{"xref_id":"0008675"}}}


id: PBO:0069969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1264, pseudogene","termid":"PBO:0069969"}


id: PBO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2/OR16-5 (non-functional)","termid":"PBO:0051133"}


id: GO:0090287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"}


id: MONDO:0970960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-saccular limited dorsal myeloschisis histologically characterized by skin tissue with a jagged depression of squamous epithelium continued to subcutaneous mature adipose tissue with loose connective tissue. GFAP-immunopositive glial cells are embedded in the subcutaneous lipoma. The extradural and intradural stalk have cord-like fibrocollagenous tissue containing adipose tissue, peripheral nerve fibers, clusters of melanocytes, and skeletal muscle fibers.","definition_xrefs":["Orphanet:645300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-saccular limited dorsal myeloschisis","termid":"MONDO:0968989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lipomatous non-saccular limited dorsal myeloschisis","secondary_identifiers":["MEDGEN:1853134","UMLS:C5816723"],"termid":"MONDO:0970960","xrefs":{"Monarch":{"xref_id":"0970960"}}}


id: GO:2001098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a tetrasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"tetrasaccharide transport","termid":"GO:2001098"}


id: GO:0043666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein.","definition_xrefs":["PMID:11724821","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphoprotein phosphatase activity (obsolete GO:0043666)","synonyms":[{"name":"regulation of calcineurin activity","type":"narrow"},{"name":"regulation of protein phosphatase 3 activity","type":"related"},{"name":"regulation of protein phosphatase type 2 activity","type":"related"},{"name":"regulation of protein phosphatase type 2A activity","type":"narrow"},{"name":"regulation of protein phosphatase type 2B activity","type":"narrow"}],"termid":"GO:0043666"}


id: PBO:0062882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian adenocarcinoma amplified long non-coding RNA","termid":"PBO:0062882"}


id: MONDO:0006696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss or destruction of the epithelial lining of the uterine cervix.","definition_xrefs":["MESH:D002579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervix erosion","secondary_identifiers":["MEDGEN:541802","SCTID:61253004","MedDRA:10015128","UMLS:C0269189","DOID:3456"],"synonyms":[{"name":"erosion of cervix","type":"exact"}],"termid":"MONDO:0006696","xrefs":{"Monarch":{"xref_id":"0006696"}}}


id: MONDO:0013976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pure hair and nail ectodermal dysplasia in which the cause of the disease is a mutation in the HOXC13 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 9, hair/nail type","secondary_identifiers":["DOID:0111656","GARD:18066","MEDGEN:767041","OMIM:614931","UMLS:C3554127"],"synonyms":[{"name":"ECTD9","type":"related"},{"name":"HOXC13 pure hair and nail ectodermal dysplasia","type":"exact"},{"name":"ectodermal dysplasia 9, hair/nail type","type":"exact"},{"name":"pure hair and nail ectodermal dysplasia caused by mutation in HOXC13","type":"exact"}],"termid":"MONDO:0013976","xrefs":{"Monarch":{"xref_id":"0013976"}}}


id: PBO:0088452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp2","termid":"PBO:0088452"}


id: PBO:0053549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 556","termid":"PBO:0053549"}


id: GO:1990227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of a paranodal junction, a highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. A paranodal junction flanks the node of Ranvier in myelinated nerve, electrically isolates the myelinated from unmyelinated nerve segments, and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.","definition_xrefs":["GOC:pr","PMID:24011083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paranodal junction maintenance","synonyms":[{"name":"axoglial septate junction maintenance","type":"exact"},{"name":"paranodal axoglial junction maintenance","type":"exact"},{"name":"paranodal septate maintenance","type":"exact"}],"termid":"GO:1990227"}


id: GO:0031203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the signal sequence of a translated protein binds to and forms a complex with the Sec complex.","definition_xrefs":["PMID:12518217","PMID:8707814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"post-translational protein targeting to endoplasmic reticulum membrane","termid":"GO:0006620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0006605","GO:0044085"],"is_obsolete":false,"name":"post-translational protein targeting to membrane, docking","synonyms":[{"name":"Sec-translated protein complex assembly","type":"exact"},{"name":"posttranslational protein membrane targeting, docking","type":"exact"},{"name":"posttranslational protein targeting to membrane, docking","type":"exact"},{"name":"protein docking during posttranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0031203"}


id: SO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located in a conserved intergenic region, between genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved_intergenic_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:conserved_intergenic_variant","type":"exact"},{"name":"conserved intergenic variant","type":"exact"},{"name":"snpEff:INTERGENIC_CONSERVED","type":"exact"}],"termid":"SO:0002017"}


id: GO:0106111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic cohesin ssDNA (lagging strand) loading.","definition_xrefs":["PMID:29358048"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic cohesin ssDNA (lagging strand) loading (obsolete GO:0106111)","termid":"GO:0106111"}


id: GO:1901288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of iron-sulfur-molybdenum cofactor.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"iron-sulfur-molybdenum cofactor metabolic process","termid":"GO:1901286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor biosynthetic process","synonyms":[{"name":"FeMo-co anabolism","type":"exact"},{"name":"FeMo-co biosynthesis","type":"exact"},{"name":"FeMo-co biosynthetic process","type":"exact"},{"name":"FeMo-co formation","type":"exact"},{"name":"FeMo-co synthesis","type":"exact"},{"name":"iron-molybdenum cofactor anabolism","type":"exact"},{"name":"iron-molybdenum cofactor biosynthesis","type":"exact"},{"name":"iron-molybdenum cofactor biosynthetic process","type":"exact"},{"name":"iron-molybdenum cofactor formation","type":"exact"},{"name":"iron-molybdenum cofactor synthesis","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor anabolism","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor biosynthesis","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor formation","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor synthesis","type":"exact"}],"termid":"GO:1901288"}


id: MONDO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders characterized by recurrent TICS that may interfere with speech and other activities. Tics are sudden, rapid, nonrhythmic, stereotyped motor movements or vocalizations which may be exacerbated by stress and are generally attenuated during absorbing activities. Tic disorders are distinguished from conditions which feature other types of abnormal movements that may accompany another another condition. (From DSM-IV, 1994)","definition_xrefs":["MESH:D013981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific developmental disorder","termid":"MONDO:0000592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tic disorder","secondary_identifiers":["DOID:2769","ICD9:307.20","UMLS:C2169806","ICD9:307.2","MEDGEN:853666","ICD10CM:F95","SCTID:568005"],"termid":"MONDO:0002420","xrefs":{"Monarch":{"xref_id":"0002420"}}}


id: PBO:0067888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 190","termid":"PBO:0067888"}


id: PATO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000673 temperature value (obsolete PATO:0000673)","termid":"PATO:0000673"}


id: PBO:0083688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase II, a phosphopyruvate hydratase; catalyzes conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression induced in response to glucose; ENO2 has a paralog, ENO1, that arose from the whole genome duplication","termid":"PBO:0083688"}


id: PBO:0077609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 4 X-linked","termid":"PBO:0077609"}


id: GO:0005914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cell-cell adherens junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spot adherens junction","synonyms":[{"name":"dense plaque","type":"broad"},{"name":"punctum adherens","type":"exact"}],"termid":"GO:0005914"}


id: PBO:0091774
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2219928_2219929insT","termid":"PBO:0091774"}


id: GO:0016106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquiterpenoid biosynthetic process","synonyms":[{"name":"sesquiterpenoid anabolism","type":"exact"},{"name":"sesquiterpenoid biosynthesis","type":"exact"},{"name":"sesquiterpenoid formation","type":"exact"},{"name":"sesquiterpenoid synthesis","type":"exact"}],"termid":"GO:0016106"}


id: GO:1900273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long-term synaptic potentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic potentiation","termid":"GO:1900271"},{"relation_name":"positively_regulates","term_name":"long-term synaptic potentiation","termid":"GO:0060291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-term synaptic potentiation","synonyms":[{"name":"activation of LTP","type":"related"},{"name":"activation of long-term potentiation","type":"broad"},{"name":"activation of long-term synaptic potentiation","type":"narrow"},{"name":"positive regulation of LTP","type":"related"},{"name":"positive regulation of long-term potentiation","type":"broad"},{"name":"up regulation of LTP","type":"related"},{"name":"up regulation of long-term potentiation","type":"broad"},{"name":"up regulation of long-term synaptic potentiation","type":"exact"},{"name":"up-regulation of LTP","type":"related"},{"name":"up-regulation of long-term potentiation","type":"broad"},{"name":"up-regulation of long-term synaptic potentiation","type":"exact"},{"name":"upregulation of LTP","type":"related"},{"name":"upregulation of long-term potentiation","type":"broad"},{"name":"upregulation of long-term synaptic potentiation","type":"exact"}],"termid":"GO:1900273"}


id: FYPO:0009024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing cysteine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth on cysteine nitrogen source","synonyms":[{"name":"increased growth on cysteine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on cysteine nitrogen source","type":"exact"}],"termid":"FYPO:0009024"}


id: GO:0006014
data:
  {"annotated_genes":["SJAG_03174","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76215],"is_not":false,"summary":null,"term":"GO:0006014"},{"annotations":[58927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ribose (ribo-pentose). As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_03174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-ribose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"D-ribose metabolism","type":"exact"}],"termid":"GO:0006014","terms_by_termid":{"GO:0006014":null,"GO:0019303":null}}


id: GO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of intestinal epithelial structure maintenance, a tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"intestinal epithelial structure maintenance","termid":"GO:0060729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal epithelial structure maintenance","termid":"GO:0060730"}


id: PBO:0058221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4511","termid":"PBO:0058221"}


id: MONDO:0005786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the hepadnaviridae.","definition_xrefs":["MESH:D018347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hepadnaviridae infectious disease","secondary_identifiers":["MEDGEN:64649","UMLS:C0206746"],"synonyms":[{"name":"Hepadnaviridae caused disease or disorder","type":"exact"},{"name":"Hepadnaviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005786","xrefs":{"Monarch":{"xref_id":"0005786"}}}


id: SO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The ends of a DNA loop where the two strands of DNA are held in close physical proximity. During interphase the anchors of DNA loops are convergently oriented CTCF binding sites.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"},{"relation_name":"part_of","term_name":"DNA_loop","termid":"SO:0002307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop_anchor","synonyms":[{"name":"DNA loop anchor","type":"exact"}],"termid":"SO:0002308"}


id: PBO:0087779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIb of cytochrome c oxidase; cytochrome c oxidase is also known as respiratory Complex IV and is the terminal member of the mitochondrial inner membrane electron transport chain; required for assembly of cytochrome c oxidase but not required for activity after assembly; phosphorylated; easily released from the intermembrane space, suggesting a loose association with Complex IV","termid":"PBO:0087779"}


id: PBO:0003898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, DUF1773 family","termid":"PBO:0003898"}


id: PBO:0083962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General transcription elongation factor TFIIS; enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites; maintains RNAPII elongation activity on ribosomal protein genes during conditions of transcriptional stress","termid":"PBO:0083962"}


id: PBO:0049038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 27","termid":"PBO:0049038"}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_04870","SJAG_01154","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90492,58642,107006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[90493,107007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:11502751","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1855198","Reactome:R-HSA-2023971"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: PBO:0068143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 450","termid":"PBO:0068143"}


id: MONDO:0019326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phakomatosis pigmentovascularis","termid":"MONDO:0017318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"phakomatosis cesiomarmorata","secondary_identifiers":["GARD:19024","SCTID:703286006","UMLS:C3839296","ICD9:759.6","MEDGEN:825141","Orphanet:79484"],"synonyms":[{"name":"phakomatosis caesiomarmorata","type":"exact"},{"name":"phakomatosis cesiomarmorata","type":"exact"},{"name":"phakomatosis pigmentovascularis type 5","type":"exact"}],"termid":"MONDO:0019326","xrefs":{"Monarch":{"xref_id":"0019326"}}}


id: GO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type IIa hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"regulates","term_name":"type IIa hypersensitivity","termid":"GO:0001794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type IIa hypersensitivity","termid":"GO:0001796"}


id: PBO:0042313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD27 antisense RNA 1","termid":"PBO:0042313"}


id: SO:0001437
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons CTN (CTT, CTC, CTA and CTG), TTA and TTG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine","synonyms":[{"name":"L","type":"exact"},{"name":"Leu","type":"exact"}],"termid":"SO:0001437"}


id: GO:0035579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a specific granule, a granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase.","definition_xrefs":["PMID:7334549","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"specific granule","termid":"GO:0042581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"specific granule membrane","synonyms":[{"name":"secondary granule membrane","type":"exact"}],"termid":"GO:0035579"}


id: PBO:0062286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily K member 3","termid":"PBO:0062286"}


id: GO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gluconeogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gluconeogenesis","termid":"GO:0006111"},{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"positively_regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of gluconeogenesis","synonyms":[{"name":"activation of gluconeogenesis","type":"narrow"},{"name":"stimulation of gluconeogenesis","type":"narrow"},{"name":"up regulation of gluconeogenesis","type":"exact"},{"name":"up-regulation of gluconeogenesis","type":"exact"},{"name":"upregulation of gluconeogenesis","type":"exact"}],"termid":"GO:0045722"}


id: PR:O94609
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like modifier-activating enzyme 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10953:SF4","OMA:SCHPO03896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme E1 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.21c","secondary_identifiers":["UniProtKB:O94609"],"synonyms":[{"name":"Spom972h-UBA1","type":"exact"},{"name":"poly(A)+ RNA transport protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94609"}


id: MONDO:0024632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"defective phagocytic cell opsonization","secondary_identifiers":["SCTID:234578009","UMLS:C0398733","MEDGEN:585045"],"synonyms":[{"name":"defective phagocytic cell opsonization","type":"exact"}],"termid":"MONDO:0024632","xrefs":{"Monarch":{"xref_id":"0024632"}}}


id: PBO:0074970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-12","termid":"PBO:0074970"}


id: FYPO:0000602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic G1 phase progression","synonyms":[{"name":"abnormal G1 phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G1 phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in G1","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: abnormal","type":"related"}],"termid":"FYPO:0000602"}


id: PBO:0066277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member A, pseudogene","termid":"PBO:0066277"}


id: GO:0071244
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79248],"is_not":false,"summary":null,"term":"GO:0071244"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbon dioxide","termid":"GO:0010037"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbon dioxide","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071244","terms_by_termid":{"GO:0071244":null}}


id: PBO:0085746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in yeast cell wall biogenesis; localizes to the cell periphery; production of Nag1p is dependent upon the presence of Slt2p and Rlm1p; gene is nested within and antisense to IMO32","termid":"PBO:0085746"}


id: PBO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 1","termid":"PBO:0048180"}


id: GO:0009109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of coenzymes, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme catabolic process (obsolete GO:0009109)","synonyms":[{"name":"coenzyme and prosthetic group catabolic process","type":"broad"},{"name":"coenzyme and prosthetic group catabolism","type":"broad"},{"name":"coenzyme breakdown","type":"exact"},{"name":"coenzyme catabolism","type":"exact"},{"name":"coenzyme degradation","type":"exact"}],"termid":"GO:0009109"}


id: PBO:0088104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter; required for cell wall chitin synthesis; localized to the ER","termid":"PBO:0088104"}


id: SO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 17-28-nt, small interfering RNA derived from transcripts of repetitive elements.","definition_xrefs":["PMID:18032451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA","termid":"SO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rasiRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:rasiRNA","type":"exact"},{"name":"repeat associated small interfering RNA","type":"exact"}],"termid":"SO:0000454"}


id: PBO:0117096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRC antisense RNA 1","termid":"PBO:0117096"}


id: GO:0071440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of an acetyl group to histone H3 at position 14 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K14 acetylation (obsolete GO:0071440)","synonyms":[{"name":"regulation of histone H3 acetylation at K14","type":"exact"},{"name":"regulation of histone H3K14 acetylation","type":"exact"}],"termid":"GO:0071440"}


id: GO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"xanthophyll biosynthetic process","synonyms":[{"name":"xanthophyll anabolism","type":"exact"},{"name":"xanthophyll biosynthesis","type":"exact"},{"name":"xanthophyll formation","type":"exact"},{"name":"xanthophyll synthesis","type":"exact"}],"termid":"GO:0016123"}


id: PBO:0017695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor","termid":"PBO:0017695"}


id: PBO:0085684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation","termid":"PBO:0085684"}


id: PBO:0051692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit B","termid":"PBO:0051692"}


id: MONDO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetraamelia-multiple malformations syndrome","termid":"MONDO:0010110"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tetraamelia syndrome 2","secondary_identifiers":["DOID:0112193","UMLS:C4747923","GARD:16286","MEDGEN:1648284","OMIM:618021"],"synonyms":[{"name":"TETAMS2","type":"related"},{"name":"tetraamelia syndrome 2","type":"exact"},{"name":"tetraamelia syndrome 2 with pulmonary agenesis","type":"related"}],"termid":"MONDO:0060732","xrefs":{"Monarch":{"xref_id":"0060732"}}}


id: GO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein heavy chain (obsolete GO:0001683)","synonyms":[{"name":"axonemal dynein heavy chain","type":"exact"}],"termid":"GO:0001683"}


id: GO:0005231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts, where channel opening contributes to an increase in membrane potential.","definition_xrefs":["ISBN:0323037070","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"excitatory extracellular ligand-gated monoatomic ion channel activity","secondary_identifiers":["Reactome:R-HSA-399711","Reactome:R-HSA-432164","Reactome:R-HSA-399712","Reactome:R-HSA-420980","Reactome:R-HSA-438037"],"termid":"GO:0005231"}


id: GO:0036127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3-sulfino-L-alanine (cysteine sulfinate).","definition_xrefs":["PMID:8346915","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3-sulfino-L-alanine binding","synonyms":[{"name":"cysteine sulfinate binding","type":"exact"}],"termid":"GO:0036127"}


id: MONDO:0014162
data:
  {"annotated_genes":["SJAG_04019"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87696],"is_not":false,"summary":null,"term":"MONDO:0014162"}]},"cv_name":"mondo","definition":"Infantile hypertrophic cardiomyopathy due to MRPL44 deficiency is a rare mitochondrial oxidative phosphorylation disorder with complex I and IV deficiency characterized by hypertrophic cardiomyopathy, hepatic steatosis with elevated liver transaminases, exercise intolerance and muscle weakness. Neuro-opthalmological features (hemiplegic migraine, Leigh-like lesions on brain MRI, pigmentary retinopathy) have been reported later in life.","definition_xrefs":["Orphanet:352563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"infantile hypertrophic cardiomyopathy due to MRPL44 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:815669","DOID:0111469","OMIM:615395","UMLS:C3809339","GARD:12892"],"synonyms":[{"name":"COXPD16","type":"exact"},{"name":"MRPL44 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation defect type 16","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 16","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPL44","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 16","type":"exact"}],"termid":"MONDO:0014162","terms_by_termid":{"MONDO:0014162":null},"xrefs":{"Monarch":{"xref_id":"0014162"}}}


id: PBO:0091595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, similar to region downstream of rps13","termid":"PBO:0091595"}


id: PBO:0075939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and cysteine rich domain 2","termid":"PBO:0075939"}


id: PBO:0061628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 11","termid":"PBO:0061628"}


id: PBO:0086235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with the CCT complex to stimulate actin folding; has similarity to phosducins; null mutant lethality is complemented by mouse phosducin-like protein MgcPhLP; CCT is short for chaperonin containing TCP-1; essential gene","termid":"PBO:0086235"}


id: PBO:0055131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2550","termid":"PBO:0055131"}


id: PR:P87174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dpb4 gene.","definition_xrefs":["UniProtKB:P87174","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.09","synonyms":[{"name":"DNA polymerase II subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dpb4","type":"exact"}],"termid":"PR:P87174"}


id: PBO:0083037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta adaptin-like subunit of the clathrin associated protein complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; suppressor of loss of casein kinase 1 function; the clathrin associated protein complex is also known as AP-3","termid":"PBO:0083037"}


id: PBO:0061678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 93","termid":"PBO:0061678"}


id: FYPO:0001419
data:
  {"alleles_by_uniquename":{"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121300],"is_not":false,"summary":null,"term":"FYPO:0001419"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows at the same rate as wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03360":null},"genotype_count":1,"genotypes_by_uniquename":{"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal cell population growth rate","references_by_uniquename":{"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_03360"],"single_locus_genotype_uniquenames":["shc1delta"],"synonyms":[{"name":"normal cell population proliferation","type":"related"},{"name":"normal cell proliferation","type":"related"},{"name":"normal growth rate","type":"broad"}],"termid":"FYPO:0001419","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001419":null}}


id: PBO:0040273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 7","termid":"PBO:0040273"}


id: MONDO:0030072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 88","secondary_identifiers":["MEDGEN:1712195","UMLS:C5394553","OMIM:618959","GARD:16398","DOID:0112222"],"synonyms":[{"name":"DEE88","type":"exact"},{"name":"EIEE88","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 88","type":"exact"},{"name":"developmental and epileptic encephalopathy 88","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 88","type":"exact"}],"termid":"MONDO:0030072","xrefs":{"Monarch":{"xref_id":"0030072"}}}


id: MONDO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unexplained symptoms reported by veterans of the Persian Gulf War with Iraq in 1991. The symptoms reported include fatigue, skin rash, muscle and joint pain, headaches, loss of memory, shortness of breath, gastrointestinal and respiratory symptoms, and extreme sensitivity to commonly occurring chemicals. (Nature 1994 May 5;369(6475):8)","definition_xrefs":["MESH:D018923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persian gulf syndrome","secondary_identifiers":["MEDGEN:84396","EFO:0007430","SCTID:95877004","ICD9:300.89","UMLS:C0282550","DOID:4491"],"synonyms":[{"name":"Gulf war syndrome","type":"exact"}],"termid":"MONDO:0005907","xrefs":{"Monarch":{"xref_id":"0005907"}}}


id: PBO:0052014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 4","termid":"PBO:0052014"}


id: PBO:0066957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 259","termid":"PBO:0066957"}


id: MONDO:0013051
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86898],"is_not":false,"summary":null,"term":"MONDO:0013051"}]},"cv_name":"mondo","definition":"Autosomal recessive cutis laxa type 2B is a rare, hereditary, developmental defect with connective tissue involvement characterized by cutis laxa of variable severity, in utero growth restriction, congenital hip dislocation and joint hyperlaxity, wrinkling of the skin, in particular the dorsum of hands and feet, and progeroid facial features. Hypotonia, developmental delay, and intellectual disability are common. In addition, cataracts, corneal clouding, wormian bones, lipodystrophy and osteopenia have been reported.","definition_xrefs":["Orphanet:357064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 2","termid":"MONDO:0019573"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005497","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1641","OMIM:612940","MESH:C567855","DOID:0070137","UMLS:C2751987","MEDGEN:414526"],"synonyms":[{"name":"ARCL2, progeroid type","type":"exact"},{"name":"ARCL2B","type":"exact"},{"name":"PYCR1 autosomal recessive cutis laxa type 2","type":"exact"},{"name":"autosomal recessive cutis laxa type 2 caused by mutation in PYCR1","type":"exact"},{"name":"autosomal recessive cutis laxa type 2, progeroid type","type":"exact"},{"name":"autosomal recessive cutis laxa type 2B","type":"exact"},{"name":"autosomal recessive cutis laxa type IIB","type":"related"},{"name":"cutis laxa with progeroid features","type":"related"},{"name":"cutis laxa, autosomal recessive type 2B","type":"related"},{"name":"cutis laxa, autosomal recessive, type 2B","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIB","type":"related"}],"termid":"MONDO:0013051","terms_by_termid":{"MONDO:0013051":null},"xrefs":{"Monarch":{"xref_id":"0013051"}}}


id: GO:0052170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the innate immune response of the host organism, the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host innate immune response","secondary_identifiers":["GO:0052309","Reactome:R-HSA-9637687"],"synonyms":[{"name":"down regulation by symbiont of host innate immunity","type":"exact"},{"name":"down-regulation by symbiont of host innate immunity","type":"exact"},{"name":"downregulation by symbiont of host innate immunity","type":"exact"},{"name":"inhibition by symbiont of host innate immunity","type":"narrow"},{"name":"negative regulation by symbiont of host innate immune response","type":"exact"},{"name":"negative regulation by symbiont of host innate immunity","type":"exact"},{"name":"negative regulation of host innate immune response","type":"exact"},{"name":"negative regulation of innate immune response in other organism","type":"broad"},{"name":"suppression by symbiont of host innate immune response","type":"exact"},{"name":"suppression of host innate immune response","type":"exact"}],"termid":"GO:0052170"}


id: PBO:0089427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase Tcd1","termid":"PBO:0089427"}


id: PBO:0085128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein implicated in ribosome biogenesis; deletion extends chronological lifespan","termid":"PBO:0085128"}


id: PBO:0054667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2073","termid":"PBO:0054667"}


id: MONDO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the bronchus.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lower respiratory tract disorder","termid":"MONDO:0000270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchial disorder","secondary_identifiers":["MESH:D001982","EFO:1002018","ICD9:519.19","MEDGEN:14233","UMLS:C0006261","SCTID:41427001","NCIT:C34439","DOID:1176"],"synonyms":[{"name":"bronchial disorder","type":"exact"},{"name":"bronchospasm","type":"exact"},{"name":"bronchus disease","type":"exact"},{"name":"bronchus disease or disorder","type":"exact"},{"name":"disease of bronchus","type":"exact"},{"name":"disease or disorder of bronchus","type":"exact"},{"name":"disorder of bronchus","type":"exact"}],"termid":"MONDO:0001358","xrefs":{"Monarch":{"xref_id":"0001358"}}}


id: FYPO:0005075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of anaphase-promoting complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased anaphase-promoting complex assembly","synonyms":[{"name":"decreased APC assembly","type":"exact"},{"name":"decreased anaphase-promoting complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased anaphase-promoting complex assembly during vegetative growth","type":"exact"},{"name":"reduced anaphase-promoting complex formation","type":"exact"}],"termid":"FYPO:0005075"}


id: MONDO:0004620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse subtype of classical Hodgkin lymphoma which is rich in Hodgkin and Reed-Sternberg cells and/or depleted in non-neoplastic lymphocytes. (WHO, 2008)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic Hodgkin lymphoma","termid":"MONDO:0009348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkin's lymphoma, lymphocytic depletion","secondary_identifiers":["SCTID:118610003","DOID:8628","icd11.foundation:1729182645","ICD9:201.7","GARD:19594","ONCOTREE:LDCHL","NCIT:C9125","UMLS:C0152267","Orphanet:98846","MEDGEN:57760"],"synonyms":[{"name":"Adult lymphocyte-depleted Classic Hodgkin lymphoma","type":"exact"},{"name":"Hodgkin lymphoma, lymphocyte depletion","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion NOS (morphologic abnormality)","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion, unspecified site, extranodal and solid organ sites","type":"exact"},{"name":"Hodgkin's lymphocytic depletion of unspecified site","type":"exact"},{"name":"adult HDLD","type":"exact"},{"name":"adult LDHD","type":"exact"},{"name":"adult lymphocyte depleted Hodgkin lymphoma","type":"exact"},{"name":"adult lymphocyte depleted Hodgkin's lymphoma","type":"exact"},{"name":"adult lymphocyte depleted classical Hodgkin lymphoma","type":"exact"},{"name":"adult lymphocyte depletion Hodgkin's disease","type":"exact"},{"name":"adult lymphocyte-depleted classical Hodgkin lymphoma","type":"exact"},{"name":"classic Hodgkin lymphoma, lymphocyte-depleted type","type":"exact"},{"name":"lymphocyte-depleted classical Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0004620","xrefs":{"Monarch":{"xref_id":"0004620"}}}


id: FYPO:0000255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the cell nucleus is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:12896976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"},{"relation_name":"is_a","term_name":"abnormal nucleus","termid":"FYPO:0002403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0002403","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased nuclear protein level during vegetative growth","synonyms":[{"name":"increased nuclear protein level during mitotic cell cycle","type":"related"},{"name":"increased protein level in nucleus during vegetative growth","type":"exact"},{"name":"localization defects, nuclear accumulation of Pap1 and Sty1","type":"narrow"},{"name":"nuclear accumulation of Pap1 and Sty1","type":"narrow"},{"name":"nuclear accumulation of protein","type":"exact"},{"name":"nuclear protein accumulation during vegetative growth","type":"exact"}],"termid":"FYPO:0000255"}


id: PBO:0042749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein U pseudogene 2","termid":"PBO:0042749"}


id: GO:0052055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the function of a host protein via a direct interaction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host molecular function (obsolete GO:0052055)","synonyms":[{"name":"modification by symbiont of host molecular function","type":"exact"},{"name":"modification by symbiont of host protein function","type":"exact"}],"termid":"GO:0052055"}


id: GO:0061072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iris morphogenesis","termid":"GO:0061072"}


id: PBO:0057277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 499b","termid":"PBO:0057277"}


id: PBO:0091730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam6","termid":"PBO:0091730"}


id: PBO:0046519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor responsive lncRNA 1","termid":"PBO:0046519"}


id: PBO:0030297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_division_site","termid":"PBO:0030297"}


id: PBO:0043585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XVII alpha 1 chain","termid":"PBO:0043585"}


id: PBO:0062236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 21","termid":"PBO:0062236"}


id: MONDO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes in the colon region of the large intestine (intestine, large).","definition_xrefs":["MESH:D003108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colonic disorder","secondary_identifiers":["DOID:5353","MEDGEN:1049","SCTID:128524007","UMLS:C0009373"],"synonyms":[{"name":"colon disease","type":"exact"},{"name":"colon disease or disorder","type":"exact"},{"name":"colon disorder","type":"exact"},{"name":"disease of colon","type":"exact"},{"name":"disease or disorder of colon","type":"exact"},{"name":"disorder of colon","type":"exact"}],"termid":"MONDO:0003409","xrefs":{"Monarch":{"xref_id":"0003409"}}}


id: GO:0099522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol","termid":"GO:0005829"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytosolic region","synonyms":[{"name":"region of cytosol","type":"exact"}],"termid":"GO:0099522"}


id: FYPO:0002926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and polyadenylated RNA (poly(A)RNA) does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-RNA interaction","termid":"FYPO:0002133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0002131","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished poly(A) RNA binding","synonyms":[{"name":"abolished adenosine recognition in polyA tail","type":"narrow"},{"name":"abolished polyA RNA binding","type":"exact"},{"name":"abolished polyadenylated RNA binding","type":"exact"},{"name":"abolished protein-poly(A) RNA interaction","type":"exact"},{"name":"poly(A) RNA binding abolished","type":"exact"}],"termid":"FYPO:0002926"}


id: FYPO:0007069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which assembly of the ribosomal small subunit is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ribosomal small subunit assembly","synonyms":[{"name":"abnormal 40S preribosome assembly","type":"narrow"},{"name":"abnormal 40S ribosomal subunit assembly","type":"narrow"},{"name":"abnormal pre-40S ribosome assembly","type":"narrow"},{"name":"abnormal ribosomal small subunit assembly during mitotic cell cycle","type":"related"},{"name":"abnormal ribosomal small subunit assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007069"}


id: GO:0019555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-glutamate into other compounds, including ornithine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-glutamate catabolic process to ornithine","secondary_identifiers":["MetaCyc:GLUTORN-PWY"],"synonyms":[{"name":"glutamate breakdown to ornithine","type":"exact"},{"name":"glutamate degradation to ornithine","type":"exact"}],"termid":"GO:0019555"}


id: GO:0031569
data:
  {"annotated_genes":["SJAG_02392","SJAG_04280","SJAG_04332","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96316,97631,100210,117846],"is_not":false,"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint prior to the G2/M transition of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"},{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"mitotic G2 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072453"],"synonyms":[{"name":"G2 cell size control checkpoint","type":"exact"},{"name":"G2/M transition size control checkpoint","type":"exact"},{"name":"mitotic G2 cell size control checkpoint","type":"related"},{"name":"mitotic cell cycle G2/M transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G2 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in G2/M transition size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0031569","terms_by_termid":{"GO:0031569":null}}


id: PBO:0029979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_nucleus","termid":"PBO:0029979"}


id: MONDO:0021029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of sebaceous gland anomaly that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary epidermal appendage anomaly","termid":"MONDO:0021026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary sebaceous gland anomaly","secondary_identifiers":["UMLS:C5680577","MEDGEN:1843175","GARD:20268","Orphanet:183460"],"synonyms":[{"name":"genetic sebaceous gland anomaly","type":"exact"}],"termid":"MONDO:0021029","xrefs":{"Monarch":{"xref_id":"0021029"}}}


id: PBO:0025462
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase deficiency","termid":"PBO:0025462"}


id: PBO:0078882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 5","termid":"PBO:0078882"}


id: PR:Q9Y7Z2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-ribosylation factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04106","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.08","secondary_identifiers":["UniProtKB:Q9Y7Z2"],"synonyms":[{"name":"Spom972h-ARF6","type":"exact"}],"termid":"PR:Q9Y7Z2"}


id: PBO:0069941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1234, pseudogene","termid":"PBO:0069941"}


id: FYPO:0005238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tryptophan measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular tryptophan level","synonyms":[{"name":"increased cellular L-tryptophan level","type":"exact"},{"name":"increased cellular tryptophan level during mitotic cell cycle","type":"related"},{"name":"increased cellular tryptophan level during vegetative growth","type":"exact"},{"name":"increased tryptophan accumulation","type":"related"}],"termid":"FYPO:0005238"}


id: PBO:0083387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps essential, verified gene PLP2/YOR281C","termid":"PBO:0083387"}


id: FYPO:0006878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes two or more rounds of cell division in which septum assembly is abnormal, and then dies.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, with abnormal septation","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, with abnormal septum assembly","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, with abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, with abnormal septation","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, with abnormal septation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, with abnormal septation","type":"exact"}],"termid":"FYPO:0006878"}


id: GO:0036286
data:
  {"annotated_genes":["SJAG_02707","SJAG_02626","SJAG_02087"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71475,73032,93676],"is_not":false,"summary":null,"term":"GO:0036286"}]},"cv_name":"cellular_component","definition":"A filamentous cortical structure formed, in S. pombe, by the eisosome component Pil1.","definition_xrefs":["GOC:vw","PMID:21900489","PMID:23722945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cortical cytoskeleton","termid":"GO:0030863"},{"relation_name":"part_of","term_name":"eisosome","termid":"GO:0032126"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02087":null,"SJAG_02626":null,"SJAG_02707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"eisosome filament","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"linear eisosome","type":"exact"}],"termid":"GO:0036286","terms_by_termid":{"GO:0036286":null}}


id: MONDO:0007238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Absence of one or both mammary glands.","definition_xrefs":["NCIT:C118459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital breast hypoplasia/aplasia","termid":"MONDO:0015855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amastia","secondary_identifiers":["SCTID:75474006","MESH:C535565"],"synonyms":[{"name":"BNAH1","type":"narrow"},{"name":"absent breasts and nipples","type":"related"},{"name":"amastia","type":"exact"},{"name":"amazia","type":"related"},{"name":"athelia","type":"related"},{"name":"breasts and/or nipples, aplasia or hypoplasia of, 1","type":"related"},{"name":"complete absence of breasts","type":"related"}],"termid":"MONDO:0007238","xrefs":{"Monarch":{"xref_id":"0007238"}}}


id: GO:1990589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF4 and CREB1 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') as part of the positive regulation of transcription. Regulatory targets include the GRP78 (HSPA5) promoter in humans, whose activation by this complex is part of the ER stress response pathway.","definition_xrefs":["GOC:bhm","PMID:12871976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"ATF4-CREB1 transcription factor complex","termid":"GO:1990589"}


id: PBO:0040544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 2","termid":"PBO:0040544"}


id: MONDO:0016293
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014872"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"night blindness","termid":"MONDO:0004588"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050534","UMLS:C0339535","ICD9:368.61","DOID:8498","MEDGEN:83289","MESH:C537743","icd11.foundation:587494652","OMIMPS:310500","SCTID:232061009","MESH:C536122","icd11.foundation:122338861","Orphanet:215","SCTID:193687000"],"synonyms":[{"name":"Oguchi's disease","type":"broad"},{"name":"congenital essential nyctalopia","type":"exact"},{"name":"congenital night blindness","type":"exact"},{"name":"hereditary night blindness","type":"exact"},{"name":"night blindness, congenital stationary","type":"exact"}],"termid":"MONDO:0016293","terms_by_termid":{"MONDO:0014872":null},"xrefs":{"Monarch":{"xref_id":"0016293"}}}


id: PR:O74375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.12c","synonyms":[{"name":"Spom972h-SPBC32F12.12c","type":"exact"}],"termid":"PR:O74375"}


id: GO:0140679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na(in) = ADP + phosphate + Na(out).","definition_xrefs":["PMID:9106203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type sodium transporter activity","secondary_identifiers":["EC:7.2.2.4","TC:3.A.1.115.1"],"termid":"GO:0140679"}


id: MONDO:0004724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the submandibular gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland carcinoma","termid":"MONDO:0006284"},{"relation_name":"is_a","term_name":"submandibular gland neoplasm","termid":"MONDO:0021244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"submandibular gland cancer","secondary_identifiers":["UMLS:C0153360","NCIT:C3526","SCTID:363380002","NCIT:C8396","ICD9:142.1","MEDGEN:57782","DOID:9173","ICD10CM:C08.0"],"synonyms":[{"name":"cancer of submandibular gland","type":"exact"},{"name":"carcinoma of submandibular gland","type":"narrow"},{"name":"carcinoma of the submandibular gland","type":"narrow"},{"name":"malignant neoplasm of submandibular gland","type":"exact"},{"name":"malignant neoplasm of submaxillary gland","type":"exact"},{"name":"malignant submandibular gland neoplasm","type":"exact"},{"name":"malignant tumor of submandibular gland","type":"exact"},{"name":"malignant tumor of the submandibular gland","type":"exact"},{"name":"malignant tumour of submandibular gland","type":"exact"},{"name":"malignant tumour of the submandibular gland","type":"exact"},{"name":"submandibular gland cancer","type":"exact"},{"name":"submandibular gland carcinoma","type":"narrow"}],"termid":"MONDO:0004724","xrefs":{"Monarch":{"xref_id":"0004724"}}}


id: PBO:0072835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sin3A associated protein 30","termid":"PBO:0072835"}


id: GO:0110061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the angiotensin-activated signaling pathway.","definition_xrefs":["PMID:28784619","GOC:lf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of angiotensin-activated signaling pathway","termid":"GO:0110061"}


id: PBO:0071156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 21","termid":"PBO:0071156"}


id: PR:O14105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC31G5.05c gene.","definition_xrefs":["UniProtKB:O14105","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.05c","synonyms":[{"name":"PPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC31G5.05c","type":"exact"},{"name":"pentose-5-phosphate 3-epimerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14105"}


id: GO:0030861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of polarized epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of polarized epithelial cell differentiation","termid":"GO:0030860"},{"relation_name":"negatively_regulates","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of polarized epithelial cell differentiation","synonyms":[{"name":"down regulation of polarized epithelial cell differentiation","type":"exact"},{"name":"down-regulation of polarized epithelial cell differentiation","type":"exact"},{"name":"downregulation of polarized epithelial cell differentiation","type":"exact"},{"name":"inhibition of polarized epithelial cell differentiation","type":"narrow"}],"termid":"GO:0030861"}


id: PBO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme Hus5","termid":"PBO:0000767"}


id: GO:1904827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA","PMID:22034194","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of hydrogen sulfide biosynthetic process","termid":"GO:1904826"},{"relation_name":"negatively_regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"down regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down regulation of hydrogen sulfide formation","type":"exact"},{"name":"down regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide formation","type":"exact"},{"name":"down-regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide anabolism","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide formation","type":"exact"},{"name":"downregulation of hydrogen sulfide synthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"inhibition of hydrogen sulfide anabolism","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthetic process","type":"narrow"},{"name":"inhibition of hydrogen sulfide formation","type":"narrow"},{"name":"inhibition of hydrogen sulfide synthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthetic process","type":"narrow"},{"name":"negative regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"negative regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulfide formation","type":"exact"},{"name":"negative regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904827"}


id: GO:0016410
data:
  {"annotated_genes":["SJAG_01826","SJAG_01592","SJAG_04791","SJAG_02773","SJAG_00469","SJAG_00519","SJAG_03900","SJAG_02990","SJAG_01877","SJAG_02165","SJAG_03112","SJAG_00102","SJAG_03537","SJAG_01619","SJAG_04131","SJAG_00676","SJAG_00097","SJAG_02309","SJAG_02842","SJAG_03961","SJAG_02296","SJAG_04631","SJAG_02726","SJAG_03288","SJAG_02085","SJAG_01204","SJAG_01899","SJAG_00695","SJAG_00246","SJAG_04535"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75334],"is_not":false,"summary":null,"term":"GO:0016410"},{"annotations":[74067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990883"},{"annotations":[80172,71643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"},{"annotations":[76063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004059"},{"annotations":[94537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046941"},{"annotations":[89170,102414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004145"},{"annotations":[72591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004343"},{"annotations":[79827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004379"},{"annotations":[66489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[75713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[93185,92527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[93186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[100750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[74263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[93187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[75715,100751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[90197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[90198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[90199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[90001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047198"},{"annotations":[66568,74056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004042"},{"annotations":[66567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004358"},{"annotations":[119104,64425,72121,104824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008080"},{"annotations":[100752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106226"},{"annotations":[100753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140065"},{"annotations":[93188,100754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140064"},{"annotations":[117187,105378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[75716,79048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"},{"annotations":[105788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061733"},{"annotations":[119843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[91170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008999"},{"annotations":[79049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[79795,80776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050291"},{"annotations":[74068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051392"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl 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activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-177160","Reactome:R-HSA-6792572","Reactome:R-HSA-9858752"],"termid":"GO:0016410","terms_by_termid":{"GO:0003870":null,"GO:0004042":null,"GO:0004059":null,"GO:0004145":null,"GO:0004343":null,"GO:0004358":null,"GO:0004379":null,"GO:0004402":null,"GO:0004596":null,"GO:0008080":null,"GO:0008999":null,"GO:0010485":null,"GO:0016410":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046941":null,"GO:0047198":null,"GO:0050291":null,"GO:0051392":null,"GO:0061733":null,"GO:0106226":null,"GO:0120518":null,"GO:0140064":null,"GO:0140065":null,"GO:1990189":null,"GO:1990190":null,"GO:1990883":null}}


id: GO:0002710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte mediated immunity","termid":"GO:0002707"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell mediated immunity","synonyms":[{"name":"down regulation of T cell mediated immunity","type":"exact"},{"name":"down-regulation of T cell mediated immunity","type":"exact"},{"name":"downregulation of T cell mediated immunity","type":"exact"},{"name":"inhibition of T cell mediated immunity","type":"narrow"},{"name":"negative regulation of T lymphocyte mediated immunity","type":"exact"},{"name":"negative regulation of T-cell mediated immunity","type":"exact"},{"name":"negative regulation of T-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002710"}


id: PBO:0080783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 3","termid":"PBO:0080783"}


id: GO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of polysaccharides by salivary amylase. Salivary amylase is released by salivary glands, usually in the mouth.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete salivary polysaccharide catabolic process (obsolete GO:0044239)","synonyms":[{"name":"salivary polysaccharide breakdown","type":"exact"},{"name":"salivary polysaccharide catabolism","type":"exact"},{"name":"salivary polysaccharide degradation","type":"exact"}],"termid":"GO:0044239"}


id: PBO:0044803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 103B","termid":"PBO:0044803"}


id: PBO:0051908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGAL antisense RNA 1","termid":"PBO:0051908"}


id: PBO:0071732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 30","termid":"PBO:0071732"}


id: FYPO:0003932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an exonucleolytic RNA catabolic process that proceeds in the 5' to 3' direction to degrade mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0034428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process","synonyms":[{"name":"normal 5'-3' exonucleolytic nuclear-transcribed mRNA catabolic process","type":"exact"},{"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'","type":"exact"}],"termid":"FYPO:0003932"}


id: MONDO:0006475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal cell carcinoma characterized by morphologic features that do not fit easily into one of the other well-defined categories of renal cell carcinoma. Examples of such features include mixtures of morphologic patterns, mucin production, and sarcomatoid morphology.","definition_xrefs":["NCIT:C27892"],"gene_count":0,"genotype_count":0,"name":"obsolete unclassified renal cell carcinoma (obsolete MONDO:0006475)","secondary_identifiers":["ONCOTREE:URCC"],"synonyms":[{"name":"URCC","type":"related"},{"name":"unclassified renal cell cancer","type":"exact"},{"name":"unclassified renal cell carcinoma","type":"exact"}],"termid":"MONDO:0006475","xrefs":{"Monarch":{"xref_id":"0006475"}}}


id: PBO:0013033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 1","termid":"PBO:0013033"}


id: PBO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorder of glycosylation","termid":"PBO:0017081"}


id: PBO:0027654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027654"}


id: GO:1900576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gerfelin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"gerfelin metabolic process","synonyms":[{"name":"gerfelin metabolism","type":"exact"}],"termid":"GO:1900576"}


id: GO:1901811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-carotene.","definition_xrefs":["GOC:yaf","PMID:11387982","MetaCyc:PWY-5943","GOC:TermGenie","UniPathway:UPA00802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-carotene catabolic process","synonyms":[{"name":"beta-carotene breakdown","type":"exact"},{"name":"beta-carotene catabolism","type":"exact"},{"name":"beta-carotene degradation","type":"exact"}],"termid":"GO:1901811"}


id: PBO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenic factor 6","termid":"PBO:0060263"}


id: GO:0019215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"intermediate filament binding","termid":"GO:0019215"}


id: GO:0052224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis in other organism involved in symbiotic interaction (obsolete GO:0052224)","synonyms":[{"name":"energy taxis in other organism during symbiotic interaction","type":"related"},{"name":"energy taxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052224"}


id: PR:Q10258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methylenetetrahydrofolate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21091:SF1","OMA:SCHPO00458","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.10","secondary_identifiers":["UniProtKB:Q10258"],"synonyms":[{"name":"Spom972h-MTHFR","type":"exact"}],"termid":"PR:Q10258"}


id: GO:0098030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of constriction located below the head and above the tail sheath of viruses with contractile tails (Myoviridae).","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, neck","termid":"GO:0098030"}


id: GO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The fraction of cells, prepared by disruptive biochemical methods, that is enriched for plasma membranes.","definition_xrefs":["PMID:11562363","GOC:mgi_curators","PMID:15601832"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane enriched fraction (obsolete GO:0001950)","synonyms":[{"name":"PME fraction","type":"related"},{"name":"plasma membrane enriched fraction","type":"exact"}],"termid":"GO:0001950"}


id: FYPO:0001351
data:
  {"alleles_by_uniquename":{"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03360:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03360","name":"shc1delta","uniquename":"SJAG_03360:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121301,121302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006545"},{"annotations":[121484,121477,121415,121482],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[121508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[121357,121365,121042,121358,121416,121041,121364,121049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[121147,121151,121148,121155,121163,121160],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[121502],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cellular membrane organization is abnormal in the vegetative growth phase of the life cycle. Cellular membrane organization results in the assembly, arrangement of constituent parts, or disassembly of a lipid bilayer membrane, such as the plasma membrane or an organelle membrane.","definition_xrefs":["PomBase:mah","GO:0061024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal membrane organization","termid":"FYPO:0001013"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03360":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":18,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"erg1delta":{"display_name":"erg1delta","display_uniquename":"erg1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00370:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"shc1delta":{"display_name":"shc1delta","display_uniquename":"shc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03360:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal membrane organization during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_02763","SJAG_01242","SJAG_03940","SJAG_03891","SJAG_01906","SJAG_03892","SJAG_04464","SJAG_03449","SJAG_03360","SJAG_01745","SJAG_00370","SJAG_04284"],"single_locus_genotype_uniquenames":["lem2delta","shc1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","vps32delta","nem2delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","nup61delta","nem1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","alx1delta","man1delta","ned1delta","vps4delta","erg1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cellular membrane organization during vegetative growth","type":"exact"},{"name":"abnormal membrane organisation during vegetative growth","type":"exact"},{"name":"abnormal membrane organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001351","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0006545":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: MONDO:0023310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemiplegic migraine (obsolete MONDO:0023310)","termid":"MONDO:0023310","xrefs":{"Monarch":{"xref_id":"0023310"}}}


id: GO:0048851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hypophysis are generated and organized. The hypophysis is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hypophysis morphogenesis","termid":"GO:0048850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypophysis formation","synonyms":[{"name":"hypophysis biosynthesis","type":"exact"},{"name":"pituitary gland biosynthesis","type":"exact"},{"name":"pituitary gland formation","type":"exact"}],"termid":"GO:0048851"}


id: GO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a calcium channel in another organism.","definition_xrefs":["GOC:fj","PMID:20920515","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium channel activity in another organism (obsolete GO:0035917)","synonyms":[{"name":"down-regulation of calcium channel activity in other organism","type":"exact"},{"name":"downregulation of calcium channel activity in other organism","type":"exact"},{"name":"inhibition of calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035917"}


id: GO:0015159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polysaccharides from one side of a membrane to the other. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}


id: GO:0047254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one + UDP-D-glucose = 2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucosyltransferase activity","secondary_identifiers":["RHEA:15541","MetaCyc:RXN-7022"],"synonyms":[{"name":"UDP-glucose:2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-2,4-dihydroxy-7-methoxy-2H-1,4-benzoxazin-3(4H)-one 2-glucosyltransferase activity","type":"related"}],"termid":"GO:0047254"}


id: PBO:0017091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 6","termid":"PBO:0017091"}


id: GO:0051029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of rRNA, ribosomal ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"rRNA transport","termid":"GO:0051029"}


id: PBO:0073543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 1","termid":"PBO:0073543"}


id: PBO:0066435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RE1 silencing transcription factor","termid":"PBO:0066435"}


id: PBO:0077686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 15","termid":"PBO:0077686"}


id: PBO:0003904
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by copper limitation","termid":"PBO:0003904"}


id: GO:0102175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysteroid-4-alpha-carboxylate + NAD+ = a 3-oxosteroid + CO2 + NADH.","definition_xrefs":["RHEA:34775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity","termid":"GO:0000252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity","secondary_identifiers":["EC:1.1.1.418","MetaCyc:RXN-11928"],"termid":"GO:0102175"}


id: GO:0020003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane-bounded vacuole within a host cell in which a symbiont organism resides. The vacuole membrane is derived from both the host and symbiont.","definition_xrefs":["GOC:mb","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuole","synonyms":[{"name":"SCV","type":"exact"},{"name":"Salmonella-containing vacuole","type":"narrow"},{"name":"bacterium-containing vacuole","type":"narrow"},{"name":"parasitophorous vacuole","type":"exact"},{"name":"pathogen-occupied vacuole","type":"narrow"}],"termid":"GO:0020003"}


id: PBO:0051396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 4 (non-functional)","termid":"PBO:0051396"}


id: PBO:0051331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-26 (pseudogene)","termid":"PBO:0051331"}


id: PBO:0087741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; functions interdependently in transcriptional activation with Snf2p and Snf5p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087741"}


id: GO:0017155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:hydrogen antiporter regulator activity (obsolete GO:0017155)","synonyms":[{"name":"sodium:hydrogen antiporter regulator activity","type":"exact"},{"name":"sodium:proton antiporter regulator","type":"exact"}],"termid":"GO:0017155"}


id: PBO:0077655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 6b","termid":"PBO:0077655"}


id: GO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte progenitor proliferation","termid":"GO:0070445"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"negative regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070446"}


id: PBO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 3","termid":"PBO:0000397"}


id: PBO:0057625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1199","termid":"PBO:0057625"}


id: GO:0009861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["GOC:jy","PMID:10234273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"jasmonic acid and ethene-dependent systemic resistance","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance","type":"exact"}],"termid":"GO:0009861"}


id: PBO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 7","termid":"PBO:0050190"}


id: GO:1902909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanosome transport.","definition_xrefs":["PMID:23334344","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of melanosome transport","termid":"GO:1902908"},{"relation_name":"negatively_regulates","term_name":"melanosome transport","termid":"GO:0032402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of melanosome transport","synonyms":[{"name":"down regulation of melanosome transport","type":"exact"},{"name":"down-regulation of melanosome transport","type":"exact"},{"name":"downregulation of melanosome transport","type":"exact"},{"name":"inhibition of melanosome transport","type":"narrow"}],"termid":"GO:1902909"}


id: MOD:01921
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to D-aspartic acid.","definition_xrefs":["ChEBI:48094","PubMed:9384562","RESID:AA0190#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"D-aspartic acid","termid":"MOD:01942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid (Asp)","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01921"}


id: PBO:0048968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPALPP motifs containing 1","termid":"PBO:0048968"}


id: PBO:0090033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus2","termid":"PBO:0090033"}


id: MONDO:0002766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentaited, non-metastasizing squamous cell carcinoma arising from the larynx. It is an exophytic, warty, and slow growing tumor affecting predominantly older men. It is associated with tobacco smoking. Symptoms include hoarseness, airway obstruction, weight loss, dysphagia, and throat pain. If left untreated, it may cause extensive local destruction.","definition_xrefs":["NCIT:C8188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal squamous cell carcinoma","termid":"MONDO:0005595"},{"relation_name":"is_a","term_name":"verrucous carcinoma","termid":"MONDO:0006006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"larynx verrucous carcinoma","secondary_identifiers":["SCTID:707427000","DOID:3752","MEDGEN:76097","UMLS:C0280328"],"synonyms":[{"name":"laryngeal throat verrucous cancer","type":"exact"},{"name":"laryngeal verrucous carcinoma","type":"exact"},{"name":"larynx verrucous carcinoma","type":"exact"},{"name":"verrucous carcinoma of larynx","type":"exact"},{"name":"verrucous carcinoma of the larynx","type":"exact"}],"termid":"MONDO:0002766","xrefs":{"Monarch":{"xref_id":"0002766"}}}


id: PBO:0062419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 59 pseudogene","termid":"PBO:0062419"}


id: GO:2001230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to gamma radiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to gamma radiation","termid":"GO:2001228"},{"relation_name":"positively_regulates","term_name":"response to gamma radiation","termid":"GO:0010332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to gamma radiation","synonyms":[{"name":"positive regulation of response to gamma ray","type":"related"},{"name":"positive regulation of response to gamma-ray photon","type":"related"}],"termid":"GO:2001230"}


id: PBO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex PHD finger subunit Cti6","termid":"PBO:0090047"}


id: MONDO:0014384
data:
  {"annotated_genes":["SJAG_01202","SJAG_00155"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88182,88183],"is_not":false,"summary":null,"term":"MONDO:0014384"}]},"cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the RPL21 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_01202":null},"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110709","MEDGEN:863000","UMLS:C4014563","GARD:16027","OMIM:615885"],"synonyms":[{"name":"HYPT12","type":"exact"},{"name":"RPL21 hypotrichosis","type":"exact"},{"name":"hypotrichosis 12","type":"exact"},{"name":"hypotrichosis caused by mutation in RPL21","type":"exact"},{"name":"hypotrichosis type 12","type":"exact"},{"name":"hypt12","type":"exact"}],"termid":"MONDO:0014384","terms_by_termid":{"MONDO:0014384":null},"xrefs":{"Monarch":{"xref_id":"0014384"}}}


id: GO:0048900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cluster of a relatively undifferentiated cell along the developing anterior lateral line, originating from cranial ectodermal placodes situated between the eye and the ear. The neuromast primordium deposits proneuromasts along the lateral line, from which the neuromasts will develop.","definition_xrefs":["PMID:15832385","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast primordium migration","termid":"GO:0048883"},{"relation_name":"part_of","term_name":"anterior lateral line development","termid":"GO:0048899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast primordium migration","synonyms":[{"name":"ALL neuromast primordium migration","type":"exact"}],"termid":"GO:0048900"}


id: GO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an exogenous environmental antigen or an endogenous antigen initiated by the adaptive immune system.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypersensitivity","secondary_identifiers":["Wikipedia:Hypersensitivity"],"synonyms":[{"name":"hypersensitivity response","type":"related"}],"termid":"GO:0002524"}


id: GO:1900043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any leptin-mediated signaling pathway that is involved in negative regulation of appetite.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete leptin-mediated signaling pathway involved in negative regulation of appetite (obsolete GO:1900043)","synonyms":[{"name":"adipocytokine signaling pathway of appetite suppression","type":"related"},{"name":"adipocytokine signaling pathway of down regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of down-regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of downregulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of inhibition of appetite","type":"related"},{"name":"adipocytokine signaling pathway of negative regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of negative regulation of hunger","type":"related"},{"name":"leptin-mediated signaling pathway involved in negative regulation of appetite","type":"exact"},{"name":"leptin-mediated signaling pathway of appetite suppression","type":"related"},{"name":"leptin-mediated signaling pathway of down regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of down-regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of downregulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of inhibition of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of negative regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of negative regulation of hunger","type":"related"},{"name":"leptin-mediated signalling pathway of appetite suppression","type":"related"},{"name":"leptin-mediated signalling pathway of down regulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of down-regulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of downregulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of inhibition of appetite","type":"narrow"},{"name":"leptin-mediated signalling pathway of negative regulation of appetite","type":"related"},{"name":"leptin-mediated signalling pathway of negative regulation of hunger","type":"related"}],"termid":"GO:1900043"}


id: PBO:0091926
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1 can modulate the probability of entering mitosis at a given cell size","termid":"PBO:0091926"}


id: GO:0050025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + O2 + H2O = 2-oxoglutarate + NH3 + H2O2.","definition_xrefs":["RHEA:20728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-glutamate oxidase activity","secondary_identifiers":["EC:1.4.3.11","MetaCyc:L-GLUTAMATE-OXIDASE-RXN"],"synonyms":[{"name":"L-glutamate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"L-glutamic acid oxidase activity","type":"related"},{"name":"glutamate (acceptor) dehydrogenase activity","type":"related"},{"name":"glutamate oxidase activity","type":"related"},{"name":"glutamic acid oxidase activity","type":"related"},{"name":"glutamic dehydrogenase (acceptor)","type":"related"}],"termid":"GO:0050025"}


id: SO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A piece of sequence that makes up a tiling_path (SO:0000472).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"tiling_path","termid":"SO:0000472"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path_fragment","synonyms":[{"name":"tiling path fragment","type":"exact"}],"termid":"SO:0000474"}


id: PBO:0059140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 7","termid":"PBO:0059140"}


id: PBO:0051217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 6-1","termid":"PBO:0051217"}


id: SO:0001389
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified aspartic acid amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_aspartic_acid","secondary_identifiers":["MOD:00904"],"synonyms":[{"name":"ModAsp","type":"exact"},{"name":"modified L aspartic acid","type":"exact"},{"name":"modified L-aspartic acid","type":"exact"}],"termid":"SO:0001389"}


id: FYECO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiosulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiosulfate","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"+ S2O32-","type":"exact"}],"termid":"FYECO:0000284"}


id: GO:0015367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: oxoglutarate(out) + malate(in) = oxoglutarate(in) + malate(out).","definition_xrefs":["TC:2.A.29.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"oxoglutarate:malate antiporter activity","secondary_identifiers":["Reactome:R-HSA-198440","Reactome:R-HSA-376851"],"synonyms":[{"name":"2-oxoglutarate/malate carrier protein","type":"exact"}],"termid":"GO:0015367"}


id: GO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycerol ether catabolic process","synonyms":[{"name":"glycerol ether breakdown","type":"exact"},{"name":"glycerol ether catabolism","type":"exact"},{"name":"glycerol ether degradation","type":"exact"}],"termid":"GO:0044269"}


id: PBO:0048359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 70","termid":"PBO:0048359"}


id: PR:O94719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug4 gene.","definition_xrefs":["UniProtKB:O94719","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 4 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.07c","synonyms":[{"name":"Spom972h-mug4","type":"exact"}],"termid":"PR:O94719"}


id: PBO:0044323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 3","termid":"PBO:0044323"}


id: PBO:0111351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp21","termid":"PBO:0111351"}


id: FYPO:0000177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the mitotic spindle is abnormal. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle assembly","secondary_identifiers":["FYPO:0001349"],"synonyms":[{"name":"abnormal bipolar spindle formation","type":"exact"},{"name":"abnormal mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"abnormal spindle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spindle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000177"}


id: PBO:0059268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL32 pseudogene 2","termid":"PBO:0059268"}


id: MONDO:1011701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined deficiency of factors IX and XII, non-human animal","secondary_identifiers":["OMIA:001526"],"termid":"MONDO:1011701","xrefs":{"Monarch":{"xref_id":"1011701"}}}


id: GO:0007618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pairwise union of individuals for the purpose of sexual reproduction, ultimately resulting in the formation of zygotes.","definition_xrefs":["ISBN:0387520546","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-organism reproductive process","termid":"GO:0044703"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating","termid":"GO:0007618"}


id: GO:0141068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of epigenetic modifications (imprints) in autosomal (non-sexual) chromosomes during gametogenesis, and propagation of these imprints during the organism's life. Genomic imprinting leads to an asymmetry between the maternal and paternal alleles and differential expression of the corresponding alleles. This can happen through heterochromatin formation or differential chromatin loop formation.","definition_xrefs":["PMID:31782494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"autosome genomic imprinting","synonyms":[{"name":"autosomal genomic imprinting","type":"exact"},{"name":"genomic imprinting of autosomal genes","type":"exact"}],"termid":"GO:0141068"}


id: PBO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase publication types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paper","termid":"PBO:0000044"}


id: GO:0008156
data:
  {"annotated_genes":["SJAG_03097","SJAG_03997","SJAG_02162","SJAG_02724","SJAG_01068","SJAG_03048","SJAG_04855","SJAG_00247","SJAG_04671","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[104166,110713,99556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[105025],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[110332,101144,105026,108446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[104072,116865,101145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[101146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[104073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication","termid":"GO:0006275"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication inhibitor","type":"related"},{"name":"down regulation of DNA replication","type":"exact"},{"name":"down-regulation of DNA replication","type":"exact"},{"name":"downregulation of DNA replication","type":"exact"},{"name":"inhibition of DNA replication","type":"narrow"}],"termid":"GO:0008156","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903467":null}}


id: GO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate + H2O = 7,8-dihydroneopterin 3'-phosphate + H+.","definition_xrefs":["PMID:19746965","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"7,8-dihydro-D-neopterin 2',3'-cyclic phosphate phosphodiesterase activity","termid":"GO:0044688"}


id: GO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A slow mechanism of blood pressure regulation that responds to changes in pressure resulting from fluid and salt intake by modulating the quantity of blood in the circulatory system.","definition_xrefs":["GOC:tb","GOC:dph","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"part_of","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process involved in regulation of blood volume","synonyms":[{"name":"renal blood volume control of blood pressure","type":"related"},{"name":"renal regulation of blood volume","type":"related"}],"termid":"GO:0001977"}


id: PBO:0072755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 5","termid":"PBO:0072755"}


id: PBO:0091589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A) bearing, possible SPAC22E12.02 UTR","termid":"PBO:0091589"}


id: PBO:0061067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAP domain containing 1","termid":"PBO:0061067"}


id: GO:0033391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182).","definition_xrefs":["PMID:17183363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromatoid body","termid":"GO:0033391"}


id: GO:0005763
data:
  {"annotated_genes":["SJAG_02777","SJAG_01520","SJAG_00889","SJAG_00105","SJAG_02324","SJAG_04788","SJAG_00060","SJAG_00860","SJAG_01767","SJAG_02201","SJAG_00782","SJAG_01468","SJAG_05320","SJAG_04378","SJAG_02452","SJAG_02067","SJAG_00628","SJAG_02643","SJAG_02359","SJAG_03053","SJAG_04164","SJAG_01734","SJAG_00944","SJAG_04494","SJAG_00148","SJAG_04281","SJAG_04753","SJAG_00513","SJAG_00077","SJAG_03584","SJAG_04173","SJAG_03065","SJAG_04918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70832,74047,74279,74911,75798,75846,77411,78241,80043,91703,91729,93853,95963,96265,97706,98409,99766,99767,104107,104878,105798,107841,108207,109898,110158,110402,111956,112208,112490,114195,117433,117853,119935],"is_not":false,"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a mitochondrial ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00077":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"28S ribosomal subunit, mitochondrial","type":"narrow"},{"name":"mitochondrial ribosomal SSU complex","type":"exact"},{"name":"mitochondrial ribosomal small subunit complex","type":"exact"}],"termid":"GO:0005763","terms_by_termid":{"GO:0005763":null}}


id: PBO:0069569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 841, pseudogene","termid":"PBO:0069569"}


id: GO:0005882
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins.","definition_xrefs":["PMID:17551517","PMID:7979242","PMID:17493611","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intermediate filament","secondary_identifiers":["FMA:63851","NIF_Subcellular:sao952483289","Wikipedia:Intermediate_filament"],"synonyms":[{"name":"intermediate filament associated protein","type":"related"},{"name":"type I intermediate filament associated protein","type":"related"},{"name":"type II intermediate filament associated protein","type":"related"}],"termid":"GO:0005882"}


id: PBO:0053719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 929","termid":"PBO:0053719"}


id: PBO:0086565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR320W is not an essential gene","termid":"PBO:0086565"}


id: MONDO:0005704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with protozoa of the phylum ciliophora.","definition_xrefs":["MESH:D016770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ciliophora infectious disease","secondary_identifiers":["MEDGEN:88379","UMLS:C0085308"],"synonyms":[{"name":"Ciliophora caused disease or disorder","type":"exact"},{"name":"Ciliophora disease or disorder","type":"exact"}],"termid":"MONDO:0005704","xrefs":{"Monarch":{"xref_id":"0005704"}}}


id: PBO:0040496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUP1 lipid droplet regulating VLDL assembly factor","termid":"PBO:0040496"}


id: PBO:0055040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2455","termid":"PBO:0055040"}


id: MONDO:0007804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pallister-Hall syndrome (PHS), a pleiotropic autosomal dominant malformative disorder, is characterized by hypothalamic hamartoma, pituitary dysfunction, bifid epiglottis, polydactyly, and, more rarely, renal abnormalities and genitourinary malformations.","definition_xrefs":["Orphanet:672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pallister-Hall syndrome","secondary_identifiers":["UMLS:C0265220","OMIM:146510","DOID:9248","NORD:1545","MEDGEN:120514","GARD:7305","MESH:D054975","NCIT:C84987","icd11.foundation:1845613381","ICD9:759.89","SCTID:56677004"],"synonyms":[{"name":"PHS","type":"exact"},{"name":"Pallister Hall syndrome","type":"exact"},{"name":"Pallister-Hall syndrome","type":"exact"},{"name":"ano-cerebro-digital syndrome","type":"exact"},{"name":"hypothalamic hamartoblastoma syndrome","type":"exact"},{"name":"hypothalamic hamartoblastoma, hypopituitarism, imperforate anus, and postaxial polydactyly","type":"exact"}],"termid":"MONDO:0007804","xrefs":{"Monarch":{"xref_id":"0007804"}}}


id: PBO:0017967
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability","termid":"PBO:0017967"}


id: PBO:0068086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 392","termid":"PBO:0068086"}


id: PBO:0072294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 12","termid":"PBO:0072294"}


id: GO:1903828
data:
  {"annotated_genes":["SJAG_01373","SJAG_01311","SJAG_01084","SJAG_02392","SJAG_04597","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[107616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[97635,92732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[96184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[116311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[97636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein localization.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"intracellular protein localization","termid":"GO:0008104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cellular protein localisation","type":"exact"},{"name":"down regulation of cellular protein localization","type":"exact"},{"name":"down-regulation of cellular protein localisation","type":"exact"},{"name":"down-regulation of cellular protein localization","type":"exact"},{"name":"downregulation of cellular protein localisation","type":"exact"},{"name":"downregulation of cellular protein localization","type":"exact"},{"name":"inhibition of cellular protein localisation","type":"narrow"},{"name":"inhibition of cellular protein localization","type":"narrow"},{"name":"negative regulation of cellular protein localisation","type":"exact"},{"name":"negative regulation of cellular protein localization","type":"exact"}],"termid":"GO:1903828","terms_by_termid":{"GO:0042308":null,"GO:0042997":null,"GO:0140325":null,"GO:1900181":null,"GO:1903067":null,"GO:1903077":null}}


id: GO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the host cell Golgi apparatus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endomembrane system","termid":"GO:0033645"},{"relation_name":"part_of","term_name":"host cell Golgi apparatus","termid":"GO:0044177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi membrane","synonyms":[{"name":"host Golgi membrane","type":"exact"}],"termid":"GO:0044178"}


id: PR:Q09799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein KRI1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00289","PANTHER:PTHR14490:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kri1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.05","secondary_identifiers":["UniProtKB:Q09799"],"synonyms":[{"name":"Spom972h-KRI1","type":"exact"}],"termid":"PR:Q09799"}


id: PBO:0083555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM8; identified by fungal homology and RT-PCR","termid":"PBO:0083555"}


id: GO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phagocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"positively_regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phagocytosis","synonyms":[{"name":"activation of phagocytosis","type":"narrow"},{"name":"stimulation of phagocytosis","type":"narrow"},{"name":"up regulation of phagocytosis","type":"exact"},{"name":"up-regulation of phagocytosis","type":"exact"},{"name":"upregulation of phagocytosis","type":"exact"}],"termid":"GO:0050766"}


id: GO:2000589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000589"}


id: MONDO:0800001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing delayed sleep phase syndrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed sleep phase syndrome, susceptibility to","secondary_identifiers":["OMIM:614163","MEDGEN:481621","UMLS:C3279991"],"synonyms":[{"name":"delayed sleep phase disorder, susceptibility to","type":"exact"}],"termid":"MONDO:0800001","xrefs":{"Monarch":{"xref_id":"0800001"}}}


id: MOD:01226
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to an L-fluorotryptophan.","definition_xrefs":["Unimod:127#W","PubMed:8069568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-tryptophan","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"}],"termid":"MOD:01226"}


id: PBO:0063491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 2","termid":"PBO:0063491"}


id: PBO:0056886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 1","termid":"PBO:0056886"}


id: GO:0120546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a reducing C-O-C group acts as acceptor.","definition_xrefs":["EC:1.23.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, reducing C-O-C group as acceptor","termid":"GO:0120546"}


id: MONDO:0006535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cicatricial pemphigoid (obsolete MONDO:0006535)","termid":"MONDO:0006535","xrefs":{"Monarch":{"xref_id":"0006535"}}}


id: GO:0015900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of benomyl into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Benomyl, methyl 1-(butylcarbamoyl)-2-benzimidazolecarbamate, is a systemic agricultural fungicide used for control of certain fungal diseases of stone fruit.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transport (obsolete GO:0015900)","termid":"GO:0015900"}


id: FYPO:0001116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to oxidative stress","termid":"FYPO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased RNA level during cellular response to H2O2","type":"exact"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"decreased transcript level during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced RNA level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001116"}


id: PR:O94313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbamoyl-phosphate synthase [ammonia], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase arginine-specific large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.08c","secondary_identifiers":["UniProtKB:O94313"],"synonyms":[{"name":"Spom972h-CPS1","type":"exact"},{"name":"arginine-specific carbamoyl-phosphate synthetase, ammonia chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94313"}


id: GO:0008069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal/ventral axis. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:dph","GOC:tb","GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"},{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral axis specification, ovarian follicular epithelium","synonyms":[{"name":"dorsal-ventral axis specification, ovarian follicular epithelium","type":"exact"},{"name":"dorsal/ventral axis determination, follicular epithelium","type":"related"},{"name":"dorsal/ventral axis determination, ovarian follicular epithelium","type":"exact"},{"name":"dorsoventral axis specification, ovarian follicular epithelium","type":"exact"}],"termid":"GO:0008069"}


id: FYPO:0003981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"increased glutathione transferase activity","termid":"FYPO:0003981"}


id: MONDO:0003699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder characterized by an intense, irrational fear of an object, activity, or situation. The individual seeks to avoid the object, activity, or situation. In adults, the individual recognizes that the fear is excessive or unreasonable.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phobic disorder","secondary_identifiers":["MESH:D010698","ICD9:300.2","ICD9:300.20","DOID:591","SCTID:386810004","MEDGEN:83881","UMLS:C0349231","EFO:1001908","NCIT:C35420"],"synonyms":[{"name":"phobia","type":"exact"}],"termid":"MONDO:0003699","xrefs":{"Monarch":{"xref_id":"0003699"}}}


id: PBO:0062963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 6","termid":"PBO:0062963"}


id: MONDO:1011050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in markhor.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, markhor","secondary_identifiers":["OMIA:000807-48167"],"termid":"MONDO:1011050","xrefs":{"Monarch":{"xref_id":"1011050"}}}


id: GO:0044433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic vesicle part (obsolete GO:0044433)","termid":"GO:0044433"}


id: MONDO:0005924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pneumocystosis (obsolete MONDO:0005924)","termid":"MONDO:0005924","xrefs":{"Monarch":{"xref_id":"0005924"}}}


id: PBO:0068842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 80, pseudogene","termid":"PBO:0068842"}


id: GO:0033942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(1->4)-D-glucosidic linkage in 4-alpha-D-{(1->4)-alpha-D-glucanosyl}n trehalose to yield trehalose and alpha-(1->4)-D-glucan.","definition_xrefs":["EC:3.2.1.141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.141-RXN"],"synonyms":[{"name":"4-alpha-D-{(1,4)-alpha-D-glucano}trehalose glucanohydrolase (trehalose-producing) activity","type":"related"},{"name":"4-alpha-D-{(1->4)-alpha-D-glucano}trehalose glucanohydrolase (trehalose-producing) activity","type":"related"},{"name":"malto-oligosyltrehalose trehalohydrolase activity","type":"related"},{"name":"maltooligosyl trehalose trehalohydrolase activity","type":"related"}],"termid":"GO:0033942"}


id: PBO:0080933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor","termid":"PBO:0080933"}


id: PBO:0059674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 40","termid":"PBO:0059674"}


id: PATO:0000210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000210 excretory function (obsolete PATO:0000210)","termid":"PATO:0000210"}


id: MONDO:0006352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenoid cystic carcinoma that arises from the paranasal sinuses. It usually has an aggressive clinical course characterized by high recurrence rates and distant metastases.","definition_xrefs":["NCIT:C6019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus adenoid cystic carcinoma","secondary_identifiers":["UMLS:C1335337","MEDGEN:233840"],"synonyms":[{"name":"accessory sinus adenoid cystic carcinoma","type":"exact"},{"name":"adenoid cystic carcinoma of accessory sinus","type":"exact"},{"name":"adenoid cystic carcinoma of paranasal sinus","type":"exact"},{"name":"adenoid cystic carcinoma of the accessory sinus","type":"exact"},{"name":"adenoid cystic carcinoma of the paranasal sinus","type":"exact"},{"name":"paranasal sinus adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006352","xrefs":{"Monarch":{"xref_id":"0006352"}}}


id: MONDO:0013754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive cutis laxa type I characterized by disturbed elastic fiber formation resulting in severe systemic connective tissue abnormalities that has material basis in homozygous or compound heterozygous mutation in the EFEMP2 gene on chromosome 11q13.","definition_xrefs":["DOID:0070133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1B","secondary_identifiers":["OMIM:614437","UMLS:C3280798","GARD:15804","MEDGEN:482428"],"synonyms":[{"name":"ARCL1B","type":"exact"},{"name":"autosomal recessive cutis laxa type IB","type":"related"},{"name":"cutis laxa, autosomal recessive, type IB","type":"related"}],"termid":"MONDO:0013754","xrefs":{"Monarch":{"xref_id":"0013754"}}}


id: GO:1904429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of t-circle formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:nc","PMID:22579284","GO_REF:0000058","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"t-circle formation","termid":"GO:0090656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of t-circle formation","synonyms":[{"name":"regulation of telomeric circle formation","type":"exact"}],"termid":"GO:1904429"}


id: MONDO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign smooth muscle neoplasm arising from the wall of the stomach. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern. Unlike gastrointestinal stromal tumors, gastric leiomyomas are by definition negative for CD34 and CD117 (C-KIT).","definition_xrefs":["NCIT:C3876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of stomach","termid":"MONDO:0021449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric leiomyoma","secondary_identifiers":["MEDGEN:116062","UMLS:C0238440","SCTID:276812001","DOID:10087"],"synonyms":[{"name":"gastric leiomyoma","type":"exact"},{"name":"leiomyoma of stomach","type":"exact"},{"name":"leiomyoma of the stomach","type":"exact"},{"name":"stomach leiomyoma","type":"exact"}],"termid":"MONDO:0000938","xrefs":{"Monarch":{"xref_id":"0000938"}}}


id: MONDO:0000237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erysipeloid (obsolete MONDO:0000237)","termid":"MONDO:0000237","xrefs":{"Monarch":{"xref_id":"0000237"}}}


id: GO:0072415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about the assembly, orientation or integrity of the spindle is received and converted into a molecular signal, contributing to a spindle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in spindle checkpoint (obsolete GO:0072415)","synonyms":[{"name":"sensing involved in spindle checkpoint","type":"related"},{"name":"spindle checkpoint sensor mechanism","type":"related"},{"name":"spindle checkpoint sensor process","type":"related"}],"termid":"GO:0072415"}


id: PBO:0066514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X associated protein","termid":"PBO:0066514"}


id: PBO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 1","termid":"PBO:0000859"}


id: SO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the splice region of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_splice_region_variant","synonyms":[{"name":"incomplete transcript splice region variant","type":"exact"}],"termid":"SO:0002079"}


id: GO:0036053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large plasma membrane-lined circular pore that perforates the flattened glomerular endothelium and, unlike those of other fenestrated capillaries, is not spanned by diaphragms; the density and size of glomerular fenestrae account, at least in part, for the high permeability of the glomerular capillary wall to water and small solutes.","definition_xrefs":["PMID:19129259","MP:0011454","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pore complex","termid":"GO:0046930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glomerular endothelium fenestra","synonyms":[{"name":"GEnC fenestration","type":"exact"},{"name":"glomerular endothelial cell fenestration","type":"exact"}],"termid":"GO:0036053"}


id: PBO:0071989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 18","termid":"PBO:0071989"}


id: PBO:0077267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 9","termid":"PBO:0077267"}


id: FYPO:0008157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal at the silent-mating type locus.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone deacetylation during vegetative growth","termid":"FYPO:0000201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone deacetylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008157"}


id: GO:0042441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in developmental pigmentation","termid":"GO:0043324"},{"relation_name":"part_of","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment metabolic process","synonyms":[{"name":"eye pigment metabolism","type":"exact"}],"termid":"GO:0042441"}


id: MONDO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral intrinsic sphincter deficiency","secondary_identifiers":["UMLS:C0375381","DOID:13461","ICD9:599.82","MEDGEN:843584"],"synonyms":[{"name":"intrinsic (urethral) sphincter deficiency [ISD]","type":"exact"}],"termid":"MONDO:0001721","xrefs":{"Monarch":{"xref_id":"0001721"}}}


id: PBO:0087153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease; required for maturation of the RNA component of RNase MRP; functions redundantly with Rnh70p and Rex2p in processing of U5 snRNA and RNase P RNA; member of RNase D family of exonucleases","termid":"PBO:0087153"}


id: PBO:0091425
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrameric(1)","termid":"PBO:0091425"}


id: PBO:0017804
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 Associated protein","termid":"PBO:0017804"}


id: PBO:0012824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-added_by","termid":"PBO:0012824"}


id: PBO:0085383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; required for the export of a-factor, catalyzes ATP hydrolysis coupled to a-factor transport; contains 12 transmembrane domains and two ATP binding domains; expressed only in MATa cells; human homolog ABCB1 mediates multidrug resistance in many chemotherapy-resistant tumors by effluxing toxic compounds from the cell","termid":"PBO:0085383"}


id: PBO:0039230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3 intronic transcript 1","termid":"PBO:0039230"}


id: PBO:0060197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 19, oligomeric","termid":"PBO:0060197"}


id: PBO:0052698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 6","termid":"PBO:0052698"}


id: PR:O74330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S27-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11594:SF0","PRO:DNx","OMA:SCHPO02489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.10","secondary_identifiers":["UniProtKB:O74330"],"synonyms":[{"name":"Spom972h-RPS27L","type":"exact"}],"termid":"PR:O74330"}


id: PBO:0086766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability","termid":"PBO:0086766"}


id: PBO:0055028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2443","termid":"PBO:0055028"}


id: MOD:01223
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:11710128","Unimod:126#N-term","PubMed:957432","OMSSA:41","PubMed:3155470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-sulfanylpropanoyl (N-term and Lys)","termid":"MOD:00497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioacylation of primary amines - site N-term","synonyms":[{"name":"3,3-Dithio-bis-(sulfosuccinimidyl)propionate","type":"related"},{"name":"Thioacyl","type":"related"},{"name":"ntermpeptioacetyl","type":"exact"},{"name":"thioacylation of primary amines (N-term and Lys)","type":"related"}],"termid":"MOD:01223"}


id: GO:0007076
data:
  {"annotated_genes":["SJAG_01873","SJAG_03942","SJAG_01837","SJAG_03048","SJAG_03161","SJAG_00768","SJAG_03682","SJAG_05032","SJAG_05193","SJAG_00871","SJAG_03567","SJAG_00207","SJAG_00646","SJAG_03832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61462,62286,67789,72156,73467,73855,78442,99539,106434,108001],"is_not":false,"summary":null,"term":"GO:0007076"},{"annotations":[89771,113517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990893"},{"annotations":[118520,104177],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00768":null,"SJAG_00871":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03682":null,"SJAG_03832":null,"SJAG_03942":null,"SJAG_05032":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-2514853","Reactome:R-HSA-2299718"],"termid":"GO:0007076","terms_by_termid":{"GO:0007076":null,"GO:1903380":null,"GO:1990893":null}}


id: GO:0019936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ceb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol phospholipid-mediated signaling (obsolete GO:0019936)","synonyms":[{"name":"inositol phospholipid-mediated signaling","type":"exact"},{"name":"inositol phospholipid-mediated signalling","type":"exact"}],"termid":"GO:0019936"}


id: PBO:0042013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 70","termid":"PBO:0042013"}


id: PBO:0076482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAR (HIV-1) RNA binding protein 1","termid":"PBO:0076482"}


id: GO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chromoplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chromoplast","termid":"GO:0009509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast envelope","termid":"GO:0031898"}


id: PBO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane transporter (predicted)","termid":"PBO:0001212"}


id: GO:1903307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GO_REF:0000058","PMID:12526776","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"positively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of regulated secretory pathway","synonyms":[{"name":"activation of regulated secretory pathway","type":"narrow"},{"name":"up regulation of regulated secretory pathway","type":"exact"},{"name":"up-regulation of regulated secretory pathway","type":"exact"},{"name":"upregulation of regulated secretory pathway","type":"exact"}],"termid":"GO:1903307"}


id: GO:0046665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the amnioserosa, an epithelium that occupies a hole in the embryonic dorsal epidermis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amnioserosa maintenance","termid":"GO:0046665"}


id: MONDO:0035444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare systemic mastocytosis characterized by the presence of at least 20% usually immature and atypical mast cells in bone marrow aspirate smears. In classic mast cell leukemia, mast cells account for at least 10% of peripheral white blood cells, although the aleukemic variant with less than 10% mast cells is more common. C-findings (cytopenias, hepatomegaly, ascites, portal hypertension, splenomegaly, skeletal lesions, malabsorption), indicative of organ damage due to mast cell infiltration, are usually present at diagnosis, while skin lesions are absent in most cases. Prognosis is generally poor.","definition_xrefs":["Orphanet:566393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mastocytosis","termid":"MONDO:0007950"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute mast cell leukemia","secondary_identifiers":["GARD:22276","ICD10CM:C94.3","MEDGEN:1843106","UMLS:C5680128"],"synonyms":[{"name":"Acute MCL","type":"exact"}],"termid":"MONDO:0035444","xrefs":{"Monarch":{"xref_id":"0035444"}}}


id: GO:0106261
data:
  {"annotated_genes":["SJAG_04756"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97250],"is_not":false,"summary":null,"term":"GO:0106261"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + S-adenosyl-L-methionine + uridine(34) in tRNA = 5'-deoxyadenosine + carboxymethyluridine(34) in tRNA + CoA + 2 H+ + L-methionine.","definition_xrefs":["PMID:30733442","PMID:25151136","RHEA:61020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0016746","GO:0003674","GO:0140098","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tRNA uridine(34) acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.311"],"termid":"GO:0106261","terms_by_termid":{"GO:0106261":null}}


id: PBO:0054415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1811","termid":"PBO:0054415"}


id: PBO:0039597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANP32A intronic transcript 1","termid":"PBO:0039597"}


id: PBO:0059279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37 pseudogene 1","termid":"PBO:0059279"}


id: MONDO:0010428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria (see this term), an inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures.","definition_xrefs":["Orphanet:217377"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome X","termid":"MONDO:0017009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome Xp11.23-p11.22 duplication syndrome","secondary_identifiers":["MESH:C567585","DOID:0060461","MEDGEN:440690","SCTID:721881008","UMLS:C2749022","DECIPHER:89","OMIM:300801","GARD:12766"],"synonyms":[{"name":"Xp11.22-p11.23 Microduplication","type":"exact"},{"name":"chromosome Xp11.23-p11.22 duplication syndrome","type":"exact"},{"name":"chromosome xp11.23-p11.22 duplication syndrome, X-linked dominant","type":"exact"},{"name":"microduplication Xp11.22-p11.23 syndrome","type":"exact"},{"name":"trisomy Xp11.22-p11.23","type":"exact"}],"termid":"MONDO:0010428","xrefs":{"Monarch":{"xref_id":"0010428"}}}


id: PBO:0110396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member A6","termid":"PBO:0110396"}


id: PBO:0069245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 500, pseudogene","termid":"PBO:0069245"}


id: MONDO:0013342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 48 (SPG48) is a form of hereditary spastic paraplegia usually characterized by a pure phenotype of a slowly progressive spastic paraplegia associated with urinary incontinence with an onset in mid- to late-adulthood. A complex phenotype, with the additional findings of cognitive impairment, sensorimotor polyneuropathy, ataxia and parkinsonism, as well as thin corpus callosum and white matter lesions (seen on magnetic resonance imaging), has also been reported.","definition_xrefs":["Orphanet:306511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"},{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"hereditary spastic paraplegia 48","secondary_identifiers":["UMLS:C3150901","OMIM:613647","GARD:17378","MEDGEN:462251","DOID:0110800","SCTID:763367009"],"synonyms":[{"name":"AP5Z1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG48","type":"exact"},{"name":"autosomal recessive spastic paraplegia 48","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 48","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in AP5Z1","type":"exact"},{"name":"hereditary spastic paraplegia type 48","type":"exact"},{"name":"spastic paraplegia 48, autosomal recessive","type":"related"}],"termid":"MONDO:0013342","xrefs":{"Monarch":{"xref_id":"0013342"}}}


id: GO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 3-diphospho-1D-myo-inositol (1,2,4,5,6)pentakisphosphate.","definition_xrefs":["PMID:18981179","MetaCyc:RXN-10971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"inositol hexakisphosphate 3-kinase activity","termid":"GO:0052724"}


id: PBO:0047542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 1","termid":"PBO:0047542"}


id: PBO:0117086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA2 antisense RNA 2","termid":"PBO:0117086"}


id: GO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclodiene stimulus. A cyclodiene is any organic insecticide (as dieldrin or chlordane) with a chlorinated methylene group forming a bridge across a 6-membered carbon ring.","definition_xrefs":["ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insecticide","termid":"GO:0017085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclodiene","synonyms":[{"name":"cyclodiene resistance","type":"related"},{"name":"cyclodiene susceptibility/resistance","type":"related"}],"termid":"GO:0046682"}


id: GO:0102469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(2S)-naringenin + O2 + reduced [NADPH--hemoprotein reductase] = (2S)-2-hydroxynaringenin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:57588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"naringenin 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14069"],"termid":"GO:0102469"}


id: PBO:0003771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex subunit Swd2.1","termid":"PBO:0003771"}


id: PBO:0072847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 2","termid":"PBO:0072847"}


id: PBO:0086919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc finger protein; YPR013C is not an essential gene","termid":"PBO:0086919"}


id: PBO:0004793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps20","termid":"PBO:0004793"}


id: PBO:0003487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.13.11.-","termid":"PBO:0003487"}


id: PBO:0082323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in degradation of ubiquitinated substrates; contributes preferentially to ERAD; required for spindle pole body duplication; mainly nuclear localization","termid":"PBO:0082323"}


id: PBO:0026645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_oxidized_DNA_binding","termid":"PBO:0026645"}


id: GO:1904524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA amplification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26195783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA amplification","termid":"GO:1904523"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA amplification","synonyms":[{"name":"down regulation of DNA amplification","type":"exact"},{"name":"down-regulation of DNA amplification","type":"exact"},{"name":"downregulation of DNA amplification","type":"exact"},{"name":"inhibition of DNA amplification","type":"narrow"}],"termid":"GO:1904524"}


id: GO:0008351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule severing activity (obsolete GO:0008351)","synonyms":[{"name":"microtubule severing activity","type":"exact"}],"termid":"GO:0008351"}


id: PBO:0041922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR4 divergent transcript","termid":"PBO:0041922"}


id: GO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by phosphopantetheinylation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein phosphopantetheinylation","synonyms":[{"name":"protein amino acid phosphopantetheinylation","type":"exact"}],"termid":"GO:0018215"}


id: PBO:0075462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 13","termid":"PBO:0075462"}


id: GO:0102261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + reduced coenzyme F420-(gamma-L-Glu)(n) = 2 H+ + NADPH + oxidized coenzyme F420-(gamma-L-Glu)(n).","definition_xrefs":["PMID:11726492","RHEA:31363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"8-hydroxy-5-deazaflavin:NADPH oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-12450","EC:1.5.1.40"],"synonyms":[{"name":"F420-dependent NADP reductase activity","type":"broad"}],"termid":"GO:0102261"}


id: GO:1904746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22801495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in development","termid":"GO:1902742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in development","synonyms":[{"name":"down regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"down regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"down regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic process involved in development","type":"exact"},{"name":"down regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"down regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"down regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"down regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"down regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"down regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"down regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"down regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"down regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"down regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"down regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"down regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"down regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"down-regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic process involved in development","type":"exact"},{"name":"down-regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"down-regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"down-regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"down-regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"down-regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"down-regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"down-regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"down-regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"down-regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"down-regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"down-regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"downregulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"downregulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"downregulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic process involved in development","type":"exact"},{"name":"downregulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"downregulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"downregulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"downregulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"downregulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"downregulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"downregulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"downregulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"downregulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"downregulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"downregulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"downregulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"downregulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"downregulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"downregulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"inhibition of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"inhibition of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic process involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic process involved in development","type":"narrow"},{"name":"inhibition of apoptotic process involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"inhibition of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"inhibition of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"inhibition of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"inhibition of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"inhibition of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"inhibition of programmed cell death by apoptosis involved in anatomical structure development","type":"narrow"},{"name":"inhibition of programmed cell death by apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"inhibition of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"inhibition of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"inhibition of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"inhibition of type I programmed cell death involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"negative regulation of apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of apoptotic process involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"negative regulation of apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"negative regulation of apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"negative regulation of commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"negative regulation of induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"negative regulation of induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"negative regulation of programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"negative regulation of signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"negative regulation of signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"negative regulation of type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"negative regulation of type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1904746"}


id: PBO:0031136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_interphase_microtubule_nucleation","termid":"PBO:0031136"}


id: MONDO:0021082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a Meckel's diverticulum.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileal neoplasm","termid":"MONDO:0006801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulum neoplasm","secondary_identifiers":["UMLS:C0345839","MEDGEN:577167","SCTID:126836001"],"synonyms":[{"name":"Meckel's diverticulum neoplasm","type":"exact"},{"name":"Meckel's diverticulum neoplasm (disease)","type":"exact"},{"name":"Meckel's diverticulum tumor","type":"exact"},{"name":"Meckel's diverticulum tumour","type":"exact"},{"name":"neoplasm of Meckel's diverticulum","type":"exact"},{"name":"tumor of Meckel's diverticulum","type":"exact"},{"name":"tumour of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0021082","xrefs":{"Monarch":{"xref_id":"0021082"}}}


id: PBO:0055480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2913","termid":"PBO:0055480"}


id: GO:0061009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gallbladder. The common bile duct transports bile from the liver and gallbladder to the intestine.","definition_xrefs":["PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common bile duct development","synonyms":[{"name":"CBD development","type":"exact"},{"name":"EHBD development","type":"broad"},{"name":"bile duct development","type":"exact"},{"name":"extrahepatic bile duct development","type":"broad"}],"termid":"GO:0061009"}


id: PBO:0071590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 7","termid":"PBO:0071590"}


id: PBO:0030730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitosis","termid":"PBO:0030730"}


id: GO:0016638
data:
  {"annotated_genes":["SJAG_03861","SJAG_02496","SJAG_04054","SJAG_01881","SJAG_00707","SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[74670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"},{"annotations":[73822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"},{"annotations":[75856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004375"},{"annotations":[116590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"},{"annotations":[60102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016639"},{"annotations":[77533,113657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.4.-.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null,"SJAG_03266":null,"SJAG_03861":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016638","terms_by_termid":{"GO:0003884":null,"GO:0004354":null,"GO:0004375":null,"GO:0004733":null,"GO:0016040":null,"GO:0016639":null,"GO:0043799":null}}


id: PR:000000001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA.","definition_xrefs":["PRO:WCB","PRO:DAN"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein","termid":"PR:000000001"}


id: GO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of N-glycosidic bonds in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"RNA glycosylase activity","termid":"GO:0030597"}


id: GO:0102044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chlorobenzoate + O2 + a reduced electron acceptor = 3-chlorobenzoate-cis-4,5-diol + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-chlorobenzoate-4,5-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10421"],"termid":"GO:0102044"}


id: MONDO:1010055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperthyroidism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism, non-human animal","secondary_identifiers":["OMIA:000511"],"termid":"MONDO:1010055","xrefs":{"Monarch":{"xref_id":"1010055"}}}


id: GO:0006305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of alkyl groups to many positions on all four bases of DNA. Alkylating agents can also modify the bases of incoming nucleotides in the course of DNA synthesis.","definition_xrefs":["ISBN:0716735970"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA alkylation (obsolete GO:0006305)","termid":"GO:0006305"}


id: MONDO:0011695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uveal melanoma","termid":"MONDO:0006486"},{"relation_name":"is_a","term_name":"susceptibility to uveal melanoma","termid":"MONDO:0007966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, uveal, susceptibility to, 1","secondary_identifiers":["OMIM:606660","UMLS:C1847724","MEDGEN:376198"],"synonyms":[{"name":"UVM1","type":"exact"},{"name":"melanoma, uveal, susceptibility to, 1","type":"exact"},{"name":"melanoma, uveal, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011695","xrefs":{"Monarch":{"xref_id":"0011695"}}}


id: SO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with polypeptide molecules.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_binding_site","synonyms":[{"name":"INSDC_feature:protein_bind","type":"exact"},{"name":"protein binding site","type":"exact"}],"termid":"SO:0000410"}


id: PBO:0081358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 184","termid":"PBO:0081358"}


id: PBO:0082981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic tyrosyl-tRNA synthetase; required for cytoplasmic protein synthesis; interacts with positions 34 and 35 of the tRNATyr anticodon; mutations in human ortholog YARS are associated with Charcot-Marie-Tooth (CMT) neuropathies; human ortholog YARS functionally complements the heat sensitivity of a ts allele; protein abundance increases in response to DNA replication stress","termid":"PBO:0082981"}


id: FYPO:0006339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has one nucleus that is not in the normal location.","definition_xrefs":["PMID:15937127","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"mononucleate vegetative cell with mislocalized nucleus","synonyms":[{"name":"lethal; mononucleate vegetative cell with mislocalized nucleus","type":"exact"},{"name":"mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"mononucleate cell with asymmetrically localized nucleus","type":"exact"},{"name":"mononucleate cell with displaced nucleus","type":"exact"},{"name":"mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"mononucleate cell with misplaced nucleus","type":"exact"},{"name":"mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"vegetative cell with mislocalized mononucleus","type":"exact"}],"termid":"FYPO:0006339"}


id: MONDO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the caecum","direct_ancestors":[{"relation_name":"is_a","term_name":"cecal neoplasm","termid":"MONDO:0005694"},{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"cecum cancer","secondary_identifiers":["MEDGEN:57557","NCIT:C9329","DOID:1521","ICD10CM:C18.0","UMLS:C0153437","ICD9:153.4"],"synonyms":[{"name":"caecum cancer","type":"exact"},{"name":"cancer of caecum","type":"exact"},{"name":"malignant caecum neoplasm","type":"exact"},{"name":"malignant cecum neoplasm","type":"exact"},{"name":"malignant cecum tumor","type":"exact"},{"name":"malignant cecum tumour","type":"exact"},{"name":"malignant neoplasm of caecum","type":"exact"},{"name":"malignant neoplasm of cecum","type":"exact"},{"name":"malignant neoplasm of the cecum","type":"exact"},{"name":"malignant tumor of cecum","type":"exact"},{"name":"malignant tumor of the cecum","type":"exact"},{"name":"malignant tumour of cecum","type":"exact"},{"name":"malignant tumour of the cecum","type":"exact"}],"termid":"MONDO:0002033","xrefs":{"Monarch":{"xref_id":"0002033"}}}


id: MONDO:1040055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by a variant or variants in the PRPH2 gene.","definition_xrefs":["PMID:26061163","PMID:25447119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"PRPH2-related retinopathy","synonyms":[{"name":"PRPH2-related retinopathy","type":"exact"}],"termid":"MONDO:1040055","xrefs":{"Monarch":{"xref_id":"1040055"}}}


id: GO:0090147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of mitochondria to the correct region of the cell that contributes to the process of mitochondrial fission.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of mitochondrion localization involved in mitochondrial fission (obsolete GO:0090147)","synonyms":[{"name":"regulation of establishment of mitochondrion localisation involved in mitochondrial fission","type":"exact"},{"name":"regulation of mitochondrial localization involved in mitochondrial fission","type":"related"}],"termid":"GO:0090147"}


id: MONDO:0002705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of tall columnar neoplastic cells that contain intracytoplasmic mucin. Grossly, cystic changes are identified.","definition_xrefs":["NCIT:C40354"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"breast mucinous carcinoma","termid":"MONDO:0002707"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"mucinous cystadenocarcinoma","termid":"MONDO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast mucinous cystadenocarcinoma","secondary_identifiers":["DOID:3609","UMLS:C1511318","MEDGEN:267769"],"synonyms":[{"name":"breast mucinous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0002705","xrefs":{"Monarch":{"xref_id":"0002705"}}}


id: GO:0035521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the ubiquitin group from a monoubiquitinated histone protein.","definition_xrefs":["PMID:20436459","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete monoubiquitinated histone deubiquitination (obsolete GO:0035521)","synonyms":[{"name":"monoubiquitinated histone deubiquitinylation","type":"exact"},{"name":"monoubiquitinated histone deubiquitylation","type":"exact"}],"termid":"GO:0035521"}


id: MONDO:0013112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any bronchiectasis in which the cause of the disease is a mutation in the SCNN1G gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic bronchiectasis","termid":"MONDO:0018956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis with or without elevated sweat chloride 3","secondary_identifiers":["MESH:C567772","OMIM:613071","UMLS:C2751324","MEDGEN:414351","DOID:0080528","GARD:18056"],"synonyms":[{"name":"BESC3","type":"related"},{"name":"SCNN1G bronchiectasis","type":"exact"},{"name":"bronchiectasis caused by mutation in SCNN1G","type":"exact"},{"name":"bronchiectasis with or without elevated sweat chloride 3","type":"exact"},{"name":"bronchiectasis with or without elevated sweat chloride type 3","type":"exact"},{"name":"cystic fibrosis-like syndrome","type":"related"}],"termid":"MONDO:0013112","xrefs":{"Monarch":{"xref_id":"0013112"}}}


id: PBO:0049647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 1","termid":"PBO:0049647"}


id: GO:0030870
data:
  {"annotated_genes":["SJAG_05373","SJAG_01677","SJAG_00640"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81088,81920,113553],"is_not":false,"summary":null,"term":"GO:0030870"}]},"cv_name":"cellular_component","definition":"Trimeric protein complex that possesses endonuclease activity; involved in meiotic recombination, DNA repair and checkpoint signaling. In Saccharomyces cerevisiae, the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins orthologous to the Saccharomyces cerevisiae proteins.","definition_xrefs":["PMID:17674145","PMID:11988766","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01677":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Mre11 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MRN complex","type":"exact"},{"name":"MRX complex","type":"exact"},{"name":"RAD50-MRE11-NBN complex","type":"exact"},{"name":"RMX complex","type":"exact"},{"name":"Rad50 complex","type":"exact"},{"name":"Rad50-Rad32-Nbs1 complex","type":"exact"}],"termid":"GO:0030870","terms_by_termid":{"GO:0030870":null}}


id: GO:0006876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of cadmium ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular cadmium ion homeostasis (obsolete GO:0006876)","synonyms":[{"name":"cadmium homeostasis","type":"broad"},{"name":"cellular cadmium ion homeostasis","type":"exact"}],"termid":"GO:0006876"}


id: FYPO:0008191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at a natural  replication barrier is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal replication fork arrest","termid":"FYPO:0008191"}


id: MONDO:0044258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete methane production (obsolete MONDO:0044258)","secondary_identifiers":["OMIM:250650"],"synonyms":[{"name":"methane production","type":"related"}],"termid":"MONDO:0044258","xrefs":{"Monarch":{"xref_id":"0044258"}}}


id: GO:0003070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by a neurotransmitter. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by neurotransmitter","termid":"GO:0003070"}


id: GO:0072129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a renal capsule from unspecified parts. The renal capsule is the tough fibrous layer surrounding the kidney, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage. During development, it comprises a single layer of flattened cells that lie just above the cortical stroma and the condensed mesenchyme of the nephrogenic zone. It is in this region that the early stages of nephron induction and formation of new generations ureteric bud branches occur, as the kidney expands.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"renal capsule morphogenesis","termid":"GO:0072128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal capsule formation","termid":"GO:0072129"}


id: FYPO:0001596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which amino acid import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal amino acid import","synonyms":[{"name":"normal amino acid import across plasma membrane","type":"exact"},{"name":"normal amino acid import during mitotic cell cycle","type":"related"},{"name":"normal amino acid import during vegetative growth","type":"exact"},{"name":"normal amino acid import into cell","type":"exact"},{"name":"normal amino acid uptake","type":"exact"}],"termid":"FYPO:0001596"}


id: PBO:0005814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase delta subunit (predicted)","termid":"PBO:0005814"}


id: PBO:0039638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 1","termid":"PBO:0039638"}


id: GO:0010907
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of glucose metabolism. Glucose metabolic processes are the chemical reactions and pathways involving glucose, the aldohexose gluco-hexose.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"glucose metabolic process","termid":"GO:0006006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of glucose metabolism","type":"exact"}],"termid":"GO:0010907","terms_by_termid":{"GO:2001172":null}}


id: PBO:0074841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 34","termid":"PBO:0074841"}


id: PBO:0040066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP19 pseudogene 2","termid":"PBO:0040066"}


id: PATO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000121 relative height (obsolete PATO:0000121)","termid":"PATO:0000121"}


id: PATO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A moderate yellow-orange to orange color.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow orange","termid":"PATO:0001944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre","termid":"PATO:0001945"}


id: PBO:0071542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 7","termid":"PBO:0071542"}


id: MONDO:0012208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital reticular ichthyosiform erythroderma","secondary_identifiers":["MEDGEN:777141","MESH:C563781","OMIM:609165","Orphanet:281190","GARD:17305","UMLS:C3665704","icd11.foundation:565254051","SCTID:703504006"],"synonyms":[{"name":"Aarau disease","type":"related"},{"name":"CRIE","type":"exact"},{"name":"IWC","type":"exact"},{"name":"erythroderma, ichthyosiform, congenital reticular","type":"related"},{"name":"erythrokeratoderma, reticular","type":"related"},{"name":"ichthyosis variegata","type":"exact"},{"name":"ichthyosis with confetti","type":"exact"}],"termid":"MONDO:0012208","xrefs":{"Monarch":{"xref_id":"0012208"}}}


id: MONDO:0958009
data:
  {"annotated_genes":["SJAG_00721"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87823],"is_not":false,"summary":null,"term":"MONDO:0958009"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00721":null},"genotype_count":0,"is_obsolete":false,"name":"spastic ataxia 10, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882738","MEDGEN:1851662","OMIM:620666"],"termid":"MONDO:0958009","terms_by_termid":{"MONDO:0958009":null},"xrefs":{"Monarch":{"xref_id":"0958009"}}}


id: FYPO:0007354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 3.","definition_xrefs":["PMID:31811152","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","synonyms":[{"name":"normal homologous chromosome pairing at RNA584 locus","type":"narrow"},{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"}],"termid":"FYPO:0007354"}


id: PBO:0052415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains pseudogene 1","termid":"PBO:0052415"}


id: GO:0005464
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79269],"is_not":false,"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of UDP-xylose from one side of a membrane to the other. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"UDP-xylose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-742373"],"termid":"GO:0005464","terms_by_termid":{"GO:0005464":null}}


id: GO:0014904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell development","termid":"GO:0055002"},{"relation_name":"part_of","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube cell development","termid":"GO:0014904"}


id: PBO:0041350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 86, pseudogene","termid":"PBO:0041350"}


id: PBO:0028476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mannose-specific_cell-cell_adhesion","termid":"PBO:0028476"}


id: PBO:0056836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A","termid":"PBO:0056836"}


id: GO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a peroxisome by microautophagy.","definition_xrefs":["PMID:12914914","GOC:autophagy","GOC:pad","PMID:15350980","PMID:16973210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"},{"relation_name":"is_a","term_name":"autophagy of peroxisome","termid":"GO:0030242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"micropexophagy","termid":"GO:0000426"}


id: PR:P78953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mid1 gene.","definition_xrefs":["UniProtKB:P78953","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"division mal foutue 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom972h-mid1","type":"exact"}],"termid":"PR:P78953"}


id: GO:0009221
data:
  {"annotated_genes":["SJAG_02874","SJAG_04665","SJAG_04627","SJAG_04487","SJAG_00885","SJAG_04657","SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109068,97270,94210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[72719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[71588,81164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70149,72720,94211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[72718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[71587,81187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine deoxyribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide biosynthetic process","termid":"GO:0009265"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY0-166"],"synonyms":[{"name":"pyrimidine deoxyribonucleotide anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleotide formation","type":"exact"},{"name":"pyrimidine deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009221","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null}}


id: PBO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein beta subunit (predicted)","termid":"PBO:0001342"}


id: GO:0018019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of a glutamine residue in proteins to form the peptidyl-N5-methyl-L-glutamine derivative.","definition_xrefs":["RESID:AA0071"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-glutamine methylation (obsolete GO:0018019)","termid":"GO:0018019"}


id: PBO:0070735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 5","termid":"PBO:0070735"}


id: PBO:0050589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1 like 1","termid":"PBO:0050589"}


id: PBO:0031766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_antimycin_A","termid":"PBO:0031766"}


id: GO:0016070
data:
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