# terms

id: FYPO:0000832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enlarged nucleus during vegetative growth","termid":"FYPO:0000344"},{"relation_name":"is_a","term_name":"elongated nucleus","termid":"FYPO:0006663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002403"],"is_obsolete":false,"name":"elongated nucleus during vegetative growth","synonyms":[{"name":"elongated nuclei during vegetative growth","type":"exact"},{"name":"elongated nucleus during mitotic cell cycle","type":"related"},{"name":"long nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0000832"}


id: PBO:0054526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1926","termid":"PBO:0054526"}


id: PBO:0050989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT74 antisense RNA 1","termid":"PBO:0050989"}


id: MONDO:0007432
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87804,87805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010829"},{"annotations":[87665,87666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014768"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"excluded_subClassOf","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"is_obsolete":false,"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:323.9","MEDGEN:199687","OMIMPS:125310","ICD9:447.8","DOID:13945","NANDO:1200545","UMLS:C0751587"],"synonyms":[{"name":"CADASIL","type":"exact"},{"name":"Casil","type":"related"},{"name":"cerebral arteriopathy with subcortical infaracts and leukoencephalopathy","type":"exact"},{"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","type":"exact"},{"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy","type":"related"},{"name":"dementia, hereditary multi-infarct type","type":"related"}],"termid":"MONDO:0007432","terms_by_termid":{"MONDO:0010829":null,"MONDO:0014768":null},"xrefs":{"Monarch":{"xref_id":"0007432"}}}


id: PBO:0084515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm F33D4.7/EMC-6, fly CG11781, human TMEM93","termid":"PBO:0084515"}


id: GO:0120064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the most distal part of the stomach.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal stomach smooth muscle contraction","termid":"GO:0014828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}


id: GO:0047996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-hydroxyphytanate + O2 = 2-oxophytanate + H2O2.","definition_xrefs":["EC:1.1.3.27","RHEA:21680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyphytanate oxidase activity","secondary_identifiers":["KEGG_REACTION:R07151","MetaCyc:HYDROXYPHYTANATE-OXIDASE-RXN"],"synonyms":[{"name":"L-2-hydroxyphytanate:oxygen 2-oxidoreductase","type":"broad"}],"termid":"GO:0047996"}


id: PBO:0005035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR domain protein, possibly involved in DNA repair","termid":"PBO:0005035"}


id: PBO:0017457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in","termid":"PBO:0017457"}


id: PBO:0041141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4","termid":"PBO:0041141"}


id: GO:0071472
data:
  {"annotated_genes":["SJAG_00661","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101963],"is_not":false,"summary":null,"term":"GO:0071472"},{"annotations":[91286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to salt stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to ionic osmotic stress","type":"exact"},{"name":"cellular salinity response","type":"exact"}],"termid":"GO:0071472","terms_by_termid":{"GO:0071472":null,"GO:0071473":null}}


id: GO:0060539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the diaphragm over time from its initial formation to the mature structure. The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle organ development","termid":"GO:0060538"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diaphragm development","termid":"GO:0060539"}


id: PBO:0061781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 2","termid":"PBO:0061781"}


id: MONDO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized necrosis of the adipose tissue in the breast. Clinically, it may present as a mass. Causes include injury, surgical procedures, and radiation treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat necrosis of breast","secondary_identifiers":["UMLS:C0156321","icd11.foundation:149925294","MEDGEN:57847","NCIT:C3661","SCTID:21381006","ICD9:611.3","DOID:10691","ICD10CM:N64.1"],"synonyms":[{"name":"breast fat necrosis","type":"exact"},{"name":"fat Necrosis of the breast","type":"exact"}],"termid":"MONDO:0001101","xrefs":{"Monarch":{"xref_id":"0001101"}}}


id: PBO:0005747
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.11.-","termid":"PBO:0005747"}


id: GO:0034197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of triglyceride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Triglycerides are important components of plant oils, animal fats and animal plasma lipoproteins.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"triglyceride transport","synonyms":[{"name":"triacylglycerol transport","type":"exact"}],"termid":"GO:0034197"}


id: MONDO:0021461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the hypopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"neoplasm of hypopharynx","termid":"MONDO:0021358"},{"relation_name":"is_a","term_name":"benign neoplasm of pharynx","termid":"MONDO:0021523"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of hypopharynx","secondary_identifiers":["UMLS:C0153939","icd11.foundation:196557985","NCIT:C3596","ICD10CM:D10.7","ICD9:210.8","MEDGEN:57575","SCTID:92139000"],"synonyms":[{"name":"benign hypopharyngeal neoplasm","type":"exact"},{"name":"benign hypopharyngeal tumor","type":"exact"},{"name":"benign hypopharyngeal tumour","type":"exact"},{"name":"benign neoplasm of the hypopharynx","type":"exact"},{"name":"benign tumor of hypopharynx","type":"exact"},{"name":"benign tumor of the hypopharynx","type":"exact"},{"name":"benign tumour of hypopharynx","type":"exact"},{"name":"benign tumour of the hypopharynx","type":"exact"},{"name":"hypopharyngeal neoplasm, benign","type":"exact"},{"name":"hypopharynx benign neoplasm","type":"exact"}],"termid":"MONDO:0021461","xrefs":{"Monarch":{"xref_id":"0021461"}}}


id: SO:0100021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A subsection of sequence with biological interest that is conserved in different proteins. They may or may not have functional or structural significance within the proteins in which they are found.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_conserved_region","synonyms":[{"name":"polypeptide conserved region","type":"exact"}],"termid":"SO:0100021"}


id: MONDO:0007216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A2 (BDA2) is a congenital malformation characterized by shortening (hypoplasia or aplasia) of the middle phalanges of the index finger and, sometimes, of the little finger.","definition_xrefs":["Orphanet:93396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A2","secondary_identifiers":["icd11.foundation:594491464","MESH:C537089","SCTID:720569006","OMIM:112600","UMLS:C1832702","MEDGEN:318690","DOID:0110965","GARD:979"],"synonyms":[{"name":"BDA2","type":"exact"},{"name":"Brachymesophalangy 2","type":"related"},{"name":"Brachymesophalangy type 2","type":"related"},{"name":"Mohr-Wriedt type brachydactyly","type":"exact"},{"name":"brachydactyly, Mohr-Wriedt type","type":"exact"},{"name":"brachydactyly, type A2","type":"related"},{"name":"brachymesophalangy II","type":"exact"}],"termid":"MONDO:0007216","xrefs":{"Monarch":{"xref_id":"0007216"}}}


id: PBO:0084391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low complexity protein; mediates inhibition of Mep1p and Mep3p activity; hyperphosphorylated upon rapamycin treatment in a Tap42p-dependent manner; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylation and localization regulated by TORC1-effector kinase, Npr1p","termid":"PBO:0084391"}


id: GO:0010329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, out of a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"auxin efflux transmembrane transporter activity","synonyms":[{"name":"auxin efflux carrier","type":"related"},{"name":"auxin efflux facilitator","type":"related"}],"termid":"GO:0010329"}


id: PBO:0087305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0087305"}


id: GO:1903970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to macrophage colony-stimulating factor.","definition_xrefs":["GOC:nc","GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to cytokine stimulus","termid":"GO:0060761"},{"relation_name":"is_a","term_name":"regulation of response to macrophage colony-stimulating factor","termid":"GO:1903969"},{"relation_name":"negatively_regulates","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to macrophage colony-stimulating factor","synonyms":[{"name":"down regulation of response to M-CSF","type":"exact"},{"name":"down regulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"down regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"down-regulation of response to M-CSF","type":"exact"},{"name":"down-regulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"down-regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"downregulation of response to M-CSF","type":"exact"},{"name":"downregulation of response to macrophage colony-stimulating factor","type":"exact"},{"name":"downregulation of response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"inhibition of response to M-CSF","type":"narrow"},{"name":"inhibition of response to macrophage colony-stimulating factor","type":"narrow"},{"name":"inhibition of response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"negative regulation of response to M-CSF","type":"exact"},{"name":"negative regulation of response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903970"}


id: MONDO:0009000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial reactive perforating collagenosis is a very rare genetic skin disease characterized by transepidermal elimination of collagen fibers presenting as recurrent spontaneously involuting keratotic papules or nodules.","definition_xrefs":["Orphanet:79147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial reactive perforating collagenosis","secondary_identifiers":["MESH:C565687","GARD:13331","MEDGEN:347504","UMLS:C1857624","icd11.foundation:563155724","OMIM:216700"],"synonyms":[{"name":"RPC","type":"related"},{"name":"collagenosis, familial reactive perforating","type":"related"},{"name":"inherited reactive perforating collagenosis","type":"related"}],"termid":"MONDO:0009000","xrefs":{"Monarch":{"xref_id":"0009000"}}}


id: PBO:0116248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid raft associated CH-OH group oxidoreductase, implicated in lipid/sterol metabolism","termid":"PBO:0116248"}


id: MOD:00156
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to an L-2',4',5'-topaquinone.","definition_xrefs":["ChEBI:21187","RESID:AA0147","PubMed:1457410","Unimod:392#Y","PubMed:1569055","PubMed:10387067","PubMed:2111581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2',4',5'-topaquinone","synonyms":[{"name":"(2S)-2-amino-3-(5-hydroxy-2,5-cyclohexadien-1,4-dion-2-yl)propanoic acid","type":"exact"},{"name":"2,4,5-trihydroxyphenylalanine quinone","type":"exact"},{"name":"5-(2-carboxy-2-aminoethyl)-2-hydroxy-1,4-benzoquinone","type":"exact"},{"name":"L-2',4',5'-topaquinone","type":"exact"},{"name":"L-2,4,5-TOPAquinone","type":"exact"},{"name":"MOD_RES 2',4',5'-topaquinone","type":"exact"},{"name":"Quinone","type":"related"},{"name":"TPQ","type":"exact"},{"name":"TopaQ","type":"exact"},{"name":"quinone","type":"related"}],"termid":"MOD:00156"}


id: MONDO:0003599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant adipose tissue neoplasm of the vulva.","definition_xrefs":["NCIT:C40321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar liposarcoma","secondary_identifiers":["DOID:5711","UMLS:C2184082","MEDGEN:412161"],"synonyms":[{"name":"liposarcoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva liposarcoma","type":"exact"},{"name":"vulvar liposarcoma","type":"exact"}],"termid":"MONDO:0003599","xrefs":{"Monarch":{"xref_id":"0003599"}}}


id: GO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of the female germ cell, a reproductive cell in females.","definition_xrefs":["GOC:hjd","CL:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell nucleus","termid":"GO:0043073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"female germ cell nucleus","secondary_identifiers":["GO:0043080"],"synonyms":[{"name":"female germ-cell nucleus","type":"exact"}],"termid":"GO:0001674"}


id: PBO:0043836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1A","termid":"PBO:0043836"}


id: GO:0102223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 H+ + 15-cis-4,4'-diapophytoene + 4 FAD = 4,4'-diapolycopene + 4 FADH2. This reaction consists of four successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene, 4,4'-diapo-zeta-carotene and 4,4'-diapolycopene as intermediates, and 4,4'-diapolycopene as the end product.","definition_xrefs":["RHEA:31391","PMID:8002598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4,4'-diapophytoene desaturase (4,4'-diaponeurosporene-forming)","secondary_identifiers":["GO:0102961","GO:0102962","MetaCyc:RXN-12224","EC:1.3.8.2","GO:0102225"],"synonyms":[{"name":"4,4'-diapo-zeta-carotene desaturase activity","type":"narrow"},{"name":"4,4'-diaponeurosporene desaturase activity","type":"narrow"},{"name":"4,4'-diapophytoene desaturase activity","type":"broad"},{"name":"4,4'-diapophytofluene desaturase activity","type":"narrow"}],"termid":"GO:0102223"}


id: PBO:0066135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein, PTB binding 2","termid":"PBO:0066135"}


id: PBO:0003182
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1","termid":"PBO:0003182"}


id: PBO:0089780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase","termid":"PBO:0089780"}


id: GO:0016237
data:
  {"annotated_genes":["SJAG_03851","SJAG_02100","SJAG_00355","SJAG_00645","SJAG_04655","SJAG_06309","SJAG_01274","SJAG_01135","SJAG_04232","SJAG_05017","SJAG_01722","SJAG_00004","SJAG_01283","SJAG_01382","SJAG_03100","SJAG_03718","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74373,74246,74782,73761,81382,73958,75108,81412,74984,76027,72064,73126,74795,81301,78700,81789,78586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"A type of autophagy where cytosolic components are ingested by late endosomes, lysosomes or yeast-type lytic vacuoles by direct invagination of the compartment membrane without prior sequestration into an autophagosome. The engulfing membranes fuse, resulting in the lysosomal delivery of the cargo wrapped in a single membrane derived from the invaginated lysosomal membrane.","definition_xrefs":["PMID:14679207","PMID:16973210","PMID:9566964","PMID:15798367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00355":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01722":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"microautophagy","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"lysosomal microautophagy","type":"broad"}],"termid":"GO:0016237","terms_by_termid":{"GO:0034727":null}}


id: GO:1990403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the brain over time, from its formation to the mature structure.","definition_xrefs":["PMID:15918910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic brain development","termid":"GO:1990403"}


id: GO:0090237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of arachidonate secretion","synonyms":[{"name":"regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:0090237"}


id: MONDO:0859251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Dentici-Novelli neurodevelopmental syndrome","secondary_identifiers":["UMLS:C5676987","MEDGEN:1810366","OMIM:619877"],"termid":"MONDO:0859251","xrefs":{"Monarch":{"xref_id":"0859251"}}}


id: GO:1901685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutathione derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione derivative metabolic process","synonyms":[{"name":"glutathione derivative metabolism","type":"exact"}],"termid":"GO:1901685"}


id: PBO:0066744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 42","termid":"PBO:0066744"}


id: PBO:0082059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase; catalyzes the formation of HMG-CoA from acetyl-CoA and acetoacetyl-CoA; involved in the second step in mevalonate biosynthesis","termid":"PBO:0082059"}


id: PBO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 17","termid":"PBO:0070712"}


id: GO:0022605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process that is a step in the formation and maturation of an ovum or female gamete from a primordial female germ cell.","definition_xrefs":["GOC:mtg_sensu","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammalian oogenesis stage","synonyms":[{"name":"mammalian oogenesis process","type":"exact"}],"termid":"GO:0022605"}


id: RO:0002568
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"m1 has_muscle_antagonist m2 iff m1 has_muscle_insertion s, m2 has_muscle_insection s, m1 acts in opposition to m2, and m2 is responsible for returning the structure to its initial position.","direct_ancestors":[{"relation_name":"is_a","term_name":"biomechanically_related_to","termid":"RO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_muscle_antagonist","termid":"RO:0002568"}


id: GO:0071890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to bicarbonate ions (CHO3-).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bicarbonate binding","synonyms":[{"name":"CHO3- ion binding binding","type":"exact"},{"name":"hydrogencarbonate binding","type":"exact"}],"termid":"GO:0071890"}


id: PBO:0041320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 72","termid":"PBO:0041320"}


id: PBO:0012573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partner of DeCapping enzyme","termid":"PBO:0012573"}


id: MOD:01411
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a monohydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated leucine","synonyms":[{"name":"Hy1Leu","type":"exact"}],"termid":"MOD:01411"}


id: GO:0036026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and tissue-type plasminogen activator (PLAT); formation of the complex inhibits the serine protease activity of tissue-type plasminogen activator.","definition_xrefs":["GOC:ans","PMID:10340997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-PLAT complex","synonyms":[{"name":"PCI-PLAT complex","type":"exact"},{"name":"SERPINA5-PLAT complex","type":"exact"},{"name":"plasma serine protease inhibitor-PLAT complex","type":"exact"},{"name":"protein C inhibitor-tPA complex","type":"exact"},{"name":"protein C inhibitor-tissue-type plasminogen activator complex","type":"exact"},{"name":"serpin A5-PLAT complex","type":"exact"}],"termid":"GO:0036026"}


id: MONDO:0020242
data:
  {"annotated_genes":["SJAG_04681","SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012099"},{"annotations":[87843,87842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"Macular dystrophy that is related to a change in a gene.","definition_xrefs":["NCIT:C140264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null,"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hereditary macular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98664","SCTID:276436007","UMLS:C0339508","ICD10CM:H35.5","NANDO:1200931","MEDGEN:137919"],"synonyms":[{"name":"genetic macular dystrophy","type":"exact"},{"name":"genetic macular dystrophy (disease)","type":"exact"}],"termid":"MONDO:0020242","terms_by_termid":{"MONDO:0010819":null,"MONDO:0012099":null},"xrefs":{"Monarch":{"xref_id":"0020242"}}}


id: GO:0097316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.","definition_xrefs":["PMID:21700702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to N-acetyl-D-glucosamine","termid":"GO:0097315"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-acetyl-D-glucosamine","termid":"GO:0097316"}


id: GO:0016172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Inhibits the growth and recrystallization of ice crystals, thereby lowering the freezing point of water and preventing cellular damage at subzero temperatures. This activity is observed in various cold-adapted organisms, including certain fish, insects, and plants, and contributes to survival in extreme cold environments by stabilizing supercooled liquid states.","definition_xrefs":["GOC:cjm","PMID:33317024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ice binding","termid":"GO:0050825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"antifreeze activity","termid":"GO:0016172"}


id: GO:0031351
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid membrane (obsolete GO:0031351)","synonyms":[{"name":"integral to plastid membrane","type":"narrow"}],"termid":"GO:0031351"}


id: PBO:0047540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 6","termid":"PBO:0047540"}


id: MOD:00902
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-arginine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-arginine residue","synonyms":[{"name":"ModArg","type":"exact"}],"termid":"MOD:00902"}


id: PBO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGA divergent transcript","termid":"PBO:0039022"}


id: PBO:0089170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog","termid":"PBO:0089170"}


id: PBO:0065804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1C, member RAS oncogene family pseudogene","termid":"PBO:0065804"}


id: PBO:0111828
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPR repeats","termid":"PBO:0111828"}


id: PBO:0038864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase RNA specific B1","termid":"PBO:0038864"}


id: PBO:0064641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenoylcysteine synthetase","termid":"PBO:0064641"}


id: MONDO:0018273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"XYLT1-congenital disorder of glycosylation","secondary_identifiers":["MEDGEN:1659170","UMLS:C4750849","Orphanet:370930","GARD:21599"],"synonyms":[{"name":"XYLT1-CDG - xylosyltransferase 1 congenital disorder of glycosylation","type":"exact"},{"name":"XYLT1-congenital disorder of glycosylation","type":"exact"},{"name":"XYLT18-CDG","type":"exact"}],"termid":"MONDO:0018273","xrefs":{"Monarch":{"xref_id":"0018273"}}}


id: RO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differs_in","termid":"RO:0002424"}


id: PR:O42662
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA large subunit methyltransferase F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase-like protein C27D7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.08c","secondary_identifiers":["UniProtKB:O42662"],"synonyms":[{"name":"Spom972h-rlmF","type":"exact"}],"termid":"PR:O42662"}


id: GO:0141222
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105992],"is_not":false,"summary":null,"term":"GO:0141222"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 14) + NAD+ + H2O = histone H3 L-lysine (position 14) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K4 to NAD, producing nicotinamide.","definition_xrefs":["PMID:20299449","PMID:23771057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0140096","GO:0019213","GO:0033558","GO:0016740"],"is_obsolete":false,"name":"histone H3K4 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141222","terms_by_termid":{"GO:0141222":null}}


id: PR:000050533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me2(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf2 gene translation product, initiator methionine removed dimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf2/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050533"}


id: MONDO:0043455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypercalcemia generally develops as a late complication of malignancy; its appearance has grave prognostic significance. It remains unclear, however, whether death is associated with hypercalcemic crisis (uncontrolled or recurrent progressive hypercalcemia) or with advanced disease. Symptoms include central nervous system impairment such as delirium with prominent symptoms of personality change, cognitive dysfunction, disorientation, incoherent speech, and psychotic symptoms such as hallucinations and delusions, smooth muscle hypotonicity, and altered cardiovascular function.","definition_xrefs":["NCIT:C3496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypercalcemia disease","termid":"MONDO:0001566"},{"relation_name":"is_a","term_name":"paraneoplastic hematological syndrome","termid":"MONDO:0700253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"humoral hypercalcemia of malignancy","secondary_identifiers":["MEDGEN:56210","UMLS:C0149911","MESH:C562390","SCTID:47709007"],"synonyms":[{"name":"hhm","type":"related"},{"name":"humoral hypercalcemia of malignancy","type":"exact"},{"name":"hypercalcemia of malignancy","type":"exact"},{"name":"mahc","type":"related"},{"name":"malignancy associated hypercalcemia","type":"related"},{"name":"malignant hypercalcemia","type":"related"}],"termid":"MONDO:0043455","xrefs":{"Monarch":{"xref_id":"0043455"}}}


id: GO:0097375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a spinal sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal sensory neuron is a sensory neuron that project to the spinal cord.","definition_xrefs":["GOC:yaf","GOC:pr","CL:0009000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal sensory neuron axon guidance","termid":"GO:0097375"}


id: PBO:0055650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3090","termid":"PBO:0055650"}


id: PBO:0065796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 2 pseudogene 2","termid":"PBO:0065796"}


id: PBO:0004656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type zinc finger protein","termid":"PBO:0004656"}


id: MONDO:0024416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Neorickettsia.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease","termid":"MONDO:0006922"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Neorickettsia infectious disease","secondary_identifiers":["UMLS:C0276121","MEDGEN:547099","SCTID:78355003"],"synonyms":[{"name":"Neorickettsia caused disease or disorder","type":"exact"},{"name":"Neorickettsia disease or disorder","type":"exact"},{"name":"neorickettsiosis","type":"exact"}],"termid":"MONDO:0024416","xrefs":{"Monarch":{"xref_id":"0024416"}}}


id: GO:0085030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by symbiont gene products that enables a symbiotic interaction with a host organism, that is beneficial to the host organism.","definition_xrefs":["GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiotic process benefiting host","synonyms":[{"name":"mutualism","type":"related"}],"termid":"GO:0085030"}


id: PBO:0050335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 37","termid":"PBO:0050335"}


id: PBO:0091462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3 H4 heterotetramer chaperone Rtt106","termid":"PBO:0091462"}


id: PBO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by hamster Dpagt1","termid":"PBO:0015256"}


id: GO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor TFIIIB-beta complex that contains the TATA-binding protein (TBP), B'' and BRF, and is involved in the regulation of transcription from type 2 RNA polymerase III promoters.","definition_xrefs":["PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIIIB complex","termid":"GO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIB-beta complex","termid":"GO:0034733"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: PBO:0046189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 3","termid":"PBO:0046189"}


id: PBO:0113151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hemoprotein; protein of unknown function that localizes to the mitochondrial inner mnembrane; null mutant displays elevated frequency of mitochondrial genome loss; contains a chalcone isomerase (CHI) domain, a predicted N-terminal transmembrane domain and an N-terminal mitochondrial targeting sequence; lacks CHI catalytic activity","termid":"PBO:0113151"}


id: GO:1901578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"negatively_regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of alkane biosynthetic process","synonyms":[{"name":"down regulation of alkane anabolism","type":"exact"},{"name":"down regulation of alkane biosynthesis","type":"exact"},{"name":"down regulation of alkane biosynthetic process","type":"exact"},{"name":"down regulation of alkane formation","type":"exact"},{"name":"down regulation of alkane synthesis","type":"exact"},{"name":"down-regulation of alkane anabolism","type":"exact"},{"name":"down-regulation of alkane biosynthesis","type":"exact"},{"name":"down-regulation of alkane biosynthetic process","type":"exact"},{"name":"down-regulation of alkane formation","type":"exact"},{"name":"down-regulation of alkane synthesis","type":"exact"},{"name":"downregulation of alkane anabolism","type":"exact"},{"name":"downregulation of alkane biosynthesis","type":"exact"},{"name":"downregulation of alkane biosynthetic process","type":"exact"},{"name":"downregulation of alkane formation","type":"exact"},{"name":"downregulation of alkane synthesis","type":"exact"},{"name":"inhibition of alkane anabolism","type":"exact"},{"name":"inhibition of alkane biosynthesis","type":"exact"},{"name":"inhibition of alkane biosynthetic process","type":"narrow"},{"name":"inhibition of alkane formation","type":"exact"},{"name":"inhibition of alkane synthesis","type":"exact"},{"name":"negative regulation of alkane anabolism","type":"exact"},{"name":"negative regulation of alkane biosynthesis","type":"exact"},{"name":"negative regulation of alkane formation","type":"exact"},{"name":"negative regulation of alkane synthesis","type":"exact"}],"termid":"GO:1901578"}


id: GO:0099018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont evades the DNA restriction modification system of its host. This process occurs in phages to protein themselves from bacterial restriction enzyme systems. Some viruses encode their own methyltransferase in order to protect their genome from host restriction enzymes. Others directly inhibit restriction enzymes while some use unusual bases in their genome to avoid restriction.","definition_xrefs":["PMID:20348932","PMID:24123737","PMID:23979432","VZ:3966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of host restriction-modification system","synonyms":[{"name":"evasion by virus of host restriction-modification system","type":"related"},{"name":"evasion of host restriction-modification system","type":"exact"},{"name":"restriction-modification system evasion by virus","type":"exact"}],"termid":"GO:0099018"}


id: PBO:0078450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 3","termid":"PBO:0078450"}


id: PBO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_translation_phenotype","termid":"PBO:0031586"}


id: PBO:0073861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A9","termid":"PBO:0073861"}


id: MONDO:0700132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"neurocristopathy, non-human animal","termid":"MONDO:1011337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, non-human animal","secondary_identifiers":["OMIA:002231"],"termid":"MONDO:0700132","xrefs":{"Monarch":{"xref_id":"0700132"}}}


id: PBO:0072971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 1","termid":"PBO:0072971"}


id: _global:connects_on
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X connects_on Y, Z, R iff whenever Z is on a R, X is adjacent to a Y and adjacent to a Z.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connects_on","termid":"_global:connects_on"}


id: MONDO:0003130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solid, unencapsulated tumor of the kidney composed of spindle mesenchymal cells that resemble fibroblasts or muscle cells. The homogeneous mass typically extends into the renal parenchyma and replaces most of the kidney. In most cases, mesoblastic nephroma is benign and occurs in the fetus or newborn, and rarely in the older child or the adult.","definition_xrefs":["MESH:D018201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"mesoblastic nephroma","secondary_identifiers":["DOID:4772","UMLS:C0206628","EFO:0007365","MEDGEN:64620","ICD9:236.99","SCTID:307604008"],"synonyms":[{"name":"mesoblastic nephroma","type":"exact"},{"name":"mesoblastic nephroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003130","xrefs":{"Monarch":{"xref_id":"0003130"}}}


id: MONDO:0007328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroidal osteoma, bilateral","secondary_identifiers":["MEDGEN:396164","UMLS:C1861558","MESH:C566124","OMIM:118865"],"synonyms":[{"name":"choroidal osteoma, bilateral","type":"exact"}],"termid":"MONDO:0007328","xrefs":{"Monarch":{"xref_id":"0007328"}}}


id: GO:1902381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 11-oxo-beta-amyrin.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"11-oxo-beta-amyrin metabolic process","synonyms":[{"name":"11-oxo-beta-amyrin metabolism","type":"exact"}],"termid":"GO:1902381"}


id: PBO:0073423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 1","termid":"PBO:0073423"}


id: PATO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000436 concrete (obsolete PATO:0000436)","termid":"PATO:0000436"}


id: MONDO:0030268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 6B","secondary_identifiers":["UMLS:C5543353","MEDGEN:1779648","DOID:0070379","OMIM:619317"],"synonyms":[{"name":"DEE6B","type":"exact"},{"name":"developmental and epileptic encephalopathy 6B","type":"exact"},{"name":"developmental and epileptic encephalopathy 6B, non-Dravet","type":"exact"}],"termid":"MONDO:0030268","xrefs":{"Monarch":{"xref_id":"0030268"}}}


id: GO:0019448
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"L-cysteine metabolic process","termid":"GO:0046439"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-cysteine breakdown","type":"exact"},{"name":"L-cysteine catabolism","type":"exact"},{"name":"L-cysteine degradation","type":"exact"}],"termid":"GO:0019448","terms_by_termid":{"GO:0019450":null}}


id: PATO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being a quadrilateral with two parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapezoid","synonyms":[{"name":"trapezoidal","type":"exact"}],"termid":"PATO:0002044"}


id: PBO:0055308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2735","termid":"PBO:0055308"}


id: GO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric prebend segment over time, from its formation to the mature structure. The metanephric prebend segment is a part of the metanephric descending thin limb that lies before the bend and exhibits permeabilities characteristic of the ascending limb, especially negligible water permeability.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prebend segment development","termid":"GO:0072066"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric prebend segment development","termid":"GO:0072228"}


id: GO:0002658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral tolerance induction","termid":"GO:0002658"}


id: MONDO:0012352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasculitis, lymphocytic, cutaneous small vessel","secondary_identifiers":["UMLS:C1853293","MEDGEN:344012","MESH:C565222","OMIM:609817"],"synonyms":[{"name":"vasculitis, lymphocytic, cutaneous small vessel","type":"exact"}],"termid":"MONDO:0012352","xrefs":{"Monarch":{"xref_id":"0012352"}}}


id: GO:0019070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes involved in creating a mature, stable viral genome. Begins after genome replication with a newly synthesized nucleic acid and ends when the genome is ready to be packaged. Includes the addition of proteins to the newly synthesized genome, and DNA repair processes.","definition_xrefs":["GOC:pk","PMID:21490093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome maturation","secondary_identifiers":["Reactome:R-HSA-168330"],"termid":"GO:0019070"}


id: MONDO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile duct sarcoma","secondary_identifiers":["NCIT:C5029","DOID:4064"],"synonyms":[{"name":"bile duct sarcoma","type":"exact"},{"name":"sarcoma of bile duct","type":"exact"},{"name":"sarcoma of the bile duct","type":"exact"}],"termid":"MONDO:0002862","xrefs":{"Monarch":{"xref_id":"0002862"}}}


id: PBO:0044234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 4A","termid":"PBO:0044234"}


id: GO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type III hypersensitivity","termid":"GO:0001803"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"negatively_regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type III hypersensitivity","synonyms":[{"name":"down regulation of type III hypersensitivity","type":"exact"},{"name":"down-regulation of type III hypersensitivity","type":"exact"},{"name":"downregulation of type III hypersensitivity","type":"exact"},{"name":"inhibition of type III hypersensitivity","type":"narrow"}],"termid":"GO:0001804"}


id: GO:0070187
data:
  {"annotated_genes":["SJAG_01777","SJAG_02194","SJAG_01378","SJAG_03685","SJAG_03092","SJAG_01864"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81550,91536,93612,96869,101505,117780],"is_not":false,"summary":null,"term":"GO:0070187"}]},"cv_name":"cellular_component","definition":"A nuclear telomere cap complex that is formed by the association of telomeric ssDNA- and dsDNA-binding proteins with telomeric DNA, and is involved in telomere protection and recruitment of telomerase. The complex is known to contain TERF1, TERF2, POT1, RAP1, TINF2 and ACD in mammalian cells, and Pot1, Tpz1, Rap1, Rif1, Rif2 and Taz1 in Saccharomyces. Taz1 and Rap1 (or their mammalian equivalents) form a dsDNA-binding subcomplex, Pot1 and Tpz1 form an ssDNA-binding subcomplex, and the two subcomplexes are bridged by Poz1, which acts as an effector molecule along with Ccq1.","definition_xrefs":["GOC:vw","GOC:mah","PMID:18828880","GOC:expert_mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear telomere cap complex","termid":"GO:0000783"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_03092":null,"SJAG_03685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"shelterin complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Pot1 complex","type":"exact"},{"name":"Pot1-Tpz1 complex","type":"exact"},{"name":"telosome","type":"exact"}],"termid":"GO:0070187","terms_by_termid":{"GO:0070187":null}}


id: PBO:0046840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 13","termid":"PBO:0046840"}


id: MONDO:0015410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal dorsum fistula/cyst","secondary_identifiers":["GARD:19963","Orphanet:141219","MEDGEN:573381","UMLS:C0339853"],"termid":"MONDO:0015410","xrefs":{"Monarch":{"xref_id":"0015410"}}}


id: MOD:00212
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["PubMed:7981196","PubMed:7947803","Unimod:407","RESID:AA0207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-4-hydroxycinnamyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E)-3-(4-hydroxyphenyl)prop-2-enoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"Hydroxycinnamyl","type":"related"},{"name":"MOD_RES S-(4-hydroxycinnamyl)cysteine","type":"exact"},{"name":"S-4-hydroxycinnamyl-L-cysteine","type":"exact"},{"name":"S-para-coumaryl-L-cysteine","type":"exact"},{"name":"cinnamate cysteine thioester","type":"exact"},{"name":"hydroxycinnamyl","type":"related"}],"termid":"MOD:00212"}


id: PBO:0057299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513c","termid":"PBO:0057299"}


id: PBO:0004214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase (predicted)","termid":"PBO:0004214"}


id: MONDO:0012893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteoarthritis in which the cause of the disease is a mutation in the GDF5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 5","secondary_identifiers":["UMLS:C4759728","OMIM:612400","MEDGEN:1674605","SCTID:239872002"],"synonyms":[{"name":"GDF5 osteoarthritis","type":"exact"},{"name":"OS5","type":"related"},{"name":"osteoarthritis caused by mutation in GDF5","type":"exact"},{"name":"osteoarthritis of hip","type":"related"},{"name":"osteoarthritis susceptibility 5","type":"exact"},{"name":"osteoarthritis susceptibility type 5","type":"exact"},{"name":"osteoarthritis-5","type":"exact"}],"termid":"MONDO:0012893","xrefs":{"Monarch":{"xref_id":"0012893"}}}


id: GO:0032762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mast cell cytokine production","termid":"GO:0032762"}


id: PBO:0079910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCRFS1 divergent transcript","termid":"PBO:0079910"}


id: MONDO:1012585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs dogs due to a mutation in the GRM1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal cerebellar ataxia, GRM1-related, dog","secondary_identifiers":["OMIA:000078-9615"],"synonyms":[{"name":"Bandera's neonatal ataxia, dog","type":"related"},{"name":"ataxia, cerebellar, neonatal, GRM1-related, dog","type":"related"}],"termid":"MONDO:1012585","xrefs":{"Monarch":{"xref_id":"1012585"}}}


id: GO:0102657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:1-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:15579662"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:0-monogalactosyldiacylglycerol palmitoyl-lipid 7-desaturase activity (obsolete GO:0102657)","termid":"GO:0102657"}


id: GO:0042658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the antigen binding groove of major histocompatibility complex class II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II protein binding","termid":"GO:0042289"},{"relation_name":"part_of","term_name":"MHC class II protein complex binding","termid":"GO:0023026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"MHC class II protein binding, via antigen binding groove","synonyms":[{"name":"major histocompatibility complex class II protein binding, via antigen binding groove","type":"exact"}],"termid":"GO:0042658"}


id: PBO:0031844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031844"}


id: MONDO:0007910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein types--Lt system","secondary_identifiers":["UMLS:C1835359","OMIM:152300","MEDGEN:322644"],"synonyms":[{"name":"lipoprotein types--Lt system","type":"exact"}],"termid":"MONDO:0007910","xrefs":{"Monarch":{"xref_id":"0007910"}}}


id: PBO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M-phase specific E3 ubiquitin protein ligase","termid":"PBO:0048168"}


id: PBO:0042471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 8","termid":"PBO:0042471"}


id: MOD:00771
data:
  {"annotated_genes":["SJAG_02763","SJAG_03012","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[121157,82433,82432,121318,121315,121317,121316,121156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 166.98-167.00 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 166.98-167.00 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00771","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: FYPO:0003507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on zinc","synonyms":[{"name":"normal cell population growth in presence of zinc","type":"exact"},{"name":"normal cell population growth on zinc","type":"exact"},{"name":"normal cell population growth on zinc ion","type":"exact"},{"name":"normal cellular response to zinc","type":"related"},{"name":"normal growth on zinc ions","type":"exact"},{"name":"normal vegetative cell population growth on zinc","type":"exact"}],"termid":"FYPO:0003507"}


id: PR:O74857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13408:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.07","secondary_identifiers":["UniProtKB:O74857"],"synonyms":[{"name":"RNA polymerase III subunit C4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C53 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC18.07","type":"related"},{"name":"Spom972h-POLR3D","type":"exact"},{"name":"rpc4","type":"related"}],"termid":"PR:O74857"}


id: PBO:0074779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3 pseudogene 1","termid":"PBO:0074779"}


id: RO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which both organisms benefit from each other (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutualistically_interacts_with","termid":"RO:0002442"}


id: PBO:0077463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C pseudogene 1","termid":"PBO:0077463"}


id: PBO:0087091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L7B; required for processing of 27SA3 pre-rRNA to 27SB pre-rRNA during assembly of large ribosomal subunit; depletion leads to a turnover of pre-rRNA; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2); binds to Domain II of 25S and 5.8S rRNAs; homologous to mammalian ribosomal protein L7 and bacterial L30; RPL7B has a paralog, RPL7A, that arose from the whole genome duplication","termid":"PBO:0087091"}


id: MONDO:0008374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone dystrophy","termid":"MONDO:0000455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal cone dystrophy type 1","secondary_identifiers":["DOID:0081024","MESH:C566719","UMLS:C1867326","OMIM:180020","GARD:3196","MEDGEN:356747"],"synonyms":[{"name":"RCD1","type":"related"},{"name":"cone dystrophy autosomal dominant","type":"related"},{"name":"cone dystrophy, autosomal dominant","type":"related"},{"name":"retinal cone Degeneration","type":"related"},{"name":"retinal cone dystrophy 1","type":"related"},{"name":"retinal cone dystrophy-1","type":"exact"}],"termid":"MONDO:0008374","xrefs":{"Monarch":{"xref_id":"0008374"}}}


id: PBO:0111826
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tf2-type transposon","termid":"PBO:0111826"}


id: FYPO:0003155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cells grow from one end, and do not grow continuously, but instead oscillate between periods of growth and pauses during which no growth occurs.","definition_xrefs":["PMID:24146635","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"intermittent monopolar cell growth","synonyms":[{"name":"intermittent monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0003155"}


id: MONDO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, solitary, and partially cystic neoplasm arising from the kidney. It occurs in children and adults. Presenting symptoms include hematuria and polycythemia. It is characterized by the presence of epithelial nodules embedded in a stroma containing spindle cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"fibroepithelial neoplasm","termid":"MONDO:0021045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic adenofibroma","secondary_identifiers":["UMLS:C1266141","DOID:2698","MEDGEN:220424","NCIT:C39812","ICDO:8965/0"],"synonyms":[{"name":"metanephric adenofibroma","type":"exact"}],"termid":"MONDO:0002396","xrefs":{"Monarch":{"xref_id":"0002396"}}}


id: GO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation via MHC class Ib","synonyms":[{"name":"down regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"down-regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"downregulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"inhibition of antigen processing and presentation via MHC class Ib","type":"narrow"}],"termid":"GO:0002593"}


id: MONDO:0011389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that has material basis in variation in the chromosome region 2q23-q24.3.","definition_xrefs":["DOID:0110547","PMID:10364526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 16","secondary_identifiers":["GARD:18110","MESH:C565832","UMLS:C1858916","MEDGEN:349054","OMIM:603964"],"synonyms":[{"name":"DFNA16","type":"narrow"},{"name":"autosomal dominant deafness 16","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 16","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 16","type":"narrow"},{"name":"deafness, autosomal dominant 16","type":"narrow"}],"termid":"MONDO:0011389","xrefs":{"Monarch":{"xref_id":"0011389"}}}


id: PBO:0045737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBAG9 pseudogene 1","termid":"PBO:0045737"}


id: GO:0090311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein deacetylation","synonyms":[{"name":"regulation of protein amino acid deacetylation","type":"exact"}],"termid":"GO:0090311"}


id: GO:0032994
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein and lipid molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-lipid complex","termid":"GO:0032994"}


id: PBO:0088520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, 2-oxoadipate/2-oxoglutarate","termid":"PBO:0088520"}


id: GO:0033006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell activation involved in immune response","synonyms":[{"name":"regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033006"}


id: PBO:0005317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp106","termid":"PBO:0005317"}


id: PBO:0005303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp28 (predicted)","termid":"PBO:0005303"}


id: PBO:0061443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group F member 2","termid":"PBO:0061443"}


id: PBO:0015264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GalactoMannan Synthesis defective","termid":"PBO:0015264"}


id: PBO:0042448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 1","termid":"PBO:0042448"}


id: PR:000027586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P08965-1, Ser-438, MOD:00046|Thr-527, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/Phos(S438,T527)","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: meiosis protein mei2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mei2/Phos:1","type":"exact"},{"name":"mei2/Phos(S438,T527)","type":"exact"}],"termid":"PR:000027586"}


id: PBO:0062330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 69 pseudogene","termid":"PBO:0062330"}


id: PBO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein alpha subunit (predicted)","termid":"PBO:0002563"}


id: PBO:0091588
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 7.9x10^3 min-1 M-1","termid":"PBO:0091588"}


id: PR:Q1MTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea2 gene.","definition_xrefs":["UniProtKB:Q1MTQ1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein tea2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.20c","synonyms":[{"name":"Spom972h-tea2","type":"exact"},{"name":"Tip elongation aberrant protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kinesin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1MTQ1"}


id: PBO:0089144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak3","termid":"PBO:0089144"}


id: GO:0036098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an organism or tissue maintains a population of male germ-line stem cells.","definition_xrefs":["GOC:sart","PMID:21752937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell population maintenance","termid":"GO:0030718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line stem cell population maintenance","termid":"GO:0036098"}


id: GO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.","definition_xrefs":["GOC:BHF","PMID:17641064","PMID:22418571","GOC:mah","PMID:19498381","PMID:19442504","GOC:vesicles","PMID:15908444","PMID:24009894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular exosome","synonyms":[{"name":"exosome","type":"exact"},{"name":"extracellular vesicular exosome","type":"exact"}],"termid":"GO:0070062"}


id: PBO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pab2 associates with polyadenylated snoRNAs near the polyadenylation site","termid":"PBO:0017010"}


id: MONDO:0004453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of myxomatous tissue that contains collections of malignant cells with prominent nucleoli.","definition_xrefs":["NCIT:C39929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular yolk sac tumor, myxomatous pattern","secondary_identifiers":["MEDGEN:271774","DOID:8081","UMLS:C1515309"],"synonyms":[{"name":"myxomatous pattern testicular yolk sac tumor","type":"related"},{"name":"myxomatous pattern testicular yolk sac tumour","type":"related"},{"name":"testicular yolk sac tumor, myxomatous pattern","type":"exact"}],"termid":"MONDO:0004453","xrefs":{"Monarch":{"xref_id":"0004453"}}}


id: PBO:0028955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_small_cells_(obsolete_FYPO:0002846)","termid":"PBO:0028955"}


id: GO:1904507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["PMID:22579284","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"positively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, telomere maintenance","type":"narrow"},{"name":"activation of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance in response to DNA damage","type":"exact"}],"termid":"GO:1904507"}


id: PBO:0028391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glyoxalase_III_activity","termid":"PBO:0028391"}


id: PBO:0108960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0108960"}


id: PBO:0043744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 pseudogene 2","termid":"PBO:0043744"}


id: GO:0015207
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114384],"is_not":false,"summary":null,"term":"GO:0015207"}]},"cv_name":"molecular_function","definition":"Enables the transfer of adenine, 6-aminopurine, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"adenine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163215","Reactome:R-HSA-5672027"],"termid":"GO:0015207","terms_by_termid":{"GO:0015207":null}}


id: PBO:0073722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAIN motif family member 2","termid":"PBO:0073722"}


id: MONDO:0957442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive ataxia due to PEX16 deficiency","secondary_identifiers":["MEDGEN:1843419","Orphanet:642954","UMLS:C5816797"],"termid":"MONDO:0957442","xrefs":{"Monarch":{"xref_id":"0957442"}}}


id: GO:0033426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"CAC codon-amino acid adaptor activity","synonyms":[{"name":"histidine tRNA","type":"related"}],"termid":"GO:0033426"}


id: PBO:0056515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 1","termid":"PBO:0056515"}


id: MONDO:1012298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"displaced abomasum, non-human animal","termid":"MONDO:1011663"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"displaced abomasum, water buffalo","secondary_identifiers":["OMIA:001119-89462"],"termid":"MONDO:1012298","xrefs":{"Monarch":{"xref_id":"1012298"}}}


id: MONDO:0010575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of congenital mixed hearing loss with perilymphatic gusher (Gusher syndrome or DFN3), hypogonadism and abnormal behavior.","definition_xrefs":["Orphanet:90646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-hypogonadism syndrome","secondary_identifiers":["MEDGEN:335003","MESH:C564435","OMIM:304350","UMLS:C1844680","GARD:1691"],"synonyms":[{"name":"DHS","type":"related"},{"name":"deafness hypogonadism syndrome","type":"related"},{"name":"deafness-hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0010575","xrefs":{"Monarch":{"xref_id":"0010575"}}}


id: PBO:0081361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 195","termid":"PBO:0081361"}


id: SO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe the sequence of a feature, where the DNA is rearranged.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetically_modified","termid":"SO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rearranged_at_DNA_level","synonyms":[{"name":"rearranged at DNA level","type":"exact"}],"termid":"SO:0000904"}


id: MOD:00874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to isoglutamyl glutamyl-glutamyl-glutamic acid, forming an isopeptide bond with a triglutamic acid.","definition_xrefs":["PubMed:1680872","RESID:AA0202#var","Unimod:452","DeltaMass:0","PubMed:10747868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl triglutamic acid","synonyms":[{"name":"GluGluGlu","type":"related"},{"name":"N alpha -(gamma-Glutamyl)-Glu3","type":"exact"},{"name":"triglutamyl","type":"related"}],"termid":"MOD:00874"}


id: PBO:0080216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIM antisense RNA 1","termid":"PBO:0080216"}


id: FYPO:0003838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction does not occur. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished actomyosin contractile ring contraction","synonyms":[{"name":"abolished actomyosin contractile ring constriction","type":"exact"},{"name":"abolished actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"abolished cytokinesis with stable actinomyosin ring","type":"related"},{"name":"abolished cytokinetic contractile ring contraction","type":"exact"},{"name":"abolished mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"abolished mitotic contractile ring contraction","type":"exact"},{"name":"actomyosin contractile ring contraction abolished","type":"exact"}],"termid":"FYPO:0003838"}


id: FYPO:0008159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation at the silent mating-type locus does not occur. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be abolished.","definition_xrefs":["PMID:16246721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone phosphorylation during vegetative growth","termid":"FYPO:0002592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-S10 phosphorylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008159"}


id: MONDO:0020856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"bone marrow failure syndrome 4","secondary_identifiers":["MEDGEN:1648485","OMIM:618116","UMLS:C4748257"],"synonyms":[{"name":"BMFS4","type":"exact"},{"name":"BONE MARROW FAILURE SYNDROME 4","type":"exact"}],"termid":"MONDO:0020856","xrefs":{"Monarch":{"xref_id":"0020856"}}}


id: GO:0070096
data:
  {"annotated_genes":["SJAG_03416","SJAG_02361"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59047,71625],"is_not":false,"summary":null,"term":"GO:0070096"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial outer membrane translocase complex.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02361":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0065003","GO:0007005","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TOM complex assembly","type":"exact"},{"name":"mitochondrion outer membrane translocase complex assembly","type":"exact"}],"termid":"GO:0070096","terms_by_termid":{"GO:0070096":null}}


id: SO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R2 retrotransposons are LINE elements (SO:0000194) that insert site-specifically into the host organism's 28S ribosomal RNA (rRNA) genes.","definition_xrefs":["PMID:21734471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LINE_element","termid":"SO:0000194"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R2_LINE_retrotransposon","synonyms":[{"name":"R2 LINE retrotransposon","type":"exact"},{"name":"R2 retrotransposon","type":"exact"},{"name":"RIR retrotransposon","type":"exact"}],"termid":"SO:0002269"}


id: MONDO:0017091
data:
  {"annotated_genes":["SJAG_04003","SJAG_02289","SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012986"},{"annotations":[87217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"},{"annotations":[89026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030669"},{"annotations":[86832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014679"},{"annotations":[87782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030482"}]},"cv_name":"mondo","definition":"Bilateral polymicrogyria is a rare cerebral malformation due to abnormal neuronal migration defined as a cerebral cortex with many excessively small convolutions. It presents with developmental delay, intellectual disability, seizures and various neurological impairments and may be isolated or comprise a clinical feature of many genetic syndromes. It may also be associated with perinatal cytomegalovirus infection.","definition_xrefs":["Orphanet:268940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymicrogyria","termid":"MONDO:0000087"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02289":null,"SJAG_04003":null,"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral polymicrogyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:422828750","MEDGEN:1647593","UMLS:C4707565","SCTID:765757003","GARD:17269"],"termid":"MONDO:0017091","terms_by_termid":{"MONDO:0012399":null,"MONDO:0012986":null,"MONDO:0014679":null,"MONDO:0030482":null,"MONDO:0030669":null},"xrefs":{"Monarch":{"xref_id":"0017091"}}}


id: GO:0120532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a tetrasaccharide linker sequence (xylose-galactose-galactose-glucuronate) on specific serine residues of a core protein, on to which dermatan sulfate, chondroitin sulfate, heparan sulfate or heparin glycosaminoglycans may be assembled to synthesise the corresponding proteoglycan.","definition_xrefs":["MetaCyc:PWY-6557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked xylosylation","termid":"GO:0180064"},{"relation_name":"part_of","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"},{"relation_name":"part_of","term_name":"heparin proteoglycan biosynthetic process","termid":"GO:0030210"},{"relation_name":"part_of","term_name":"chondroitin sulfate proteoglycan biosynthetic process","termid":"GO:0050650"},{"relation_name":"part_of","term_name":"dermatan sulfate proteoglycan biosynthetic process","termid":"GO:0050651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan-protein linkage region biosynthetic process","synonyms":[{"name":"Glycosaminoglycan biosynthesis, linkage tetrasaccharide","type":"exact"},{"name":"glycosaminoglycan-protein linkage region biosynthesis","type":"exact"}],"termid":"GO:0120532"}


id: MONDO:0012135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 2","secondary_identifiers":["UMLS:C1837285","MEDGEN:324722","OMIM:608831"],"synonyms":[{"name":"RLS2","type":"exact"},{"name":"restless legs syndrome 2","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0012135","xrefs":{"Monarch":{"xref_id":"0012135"}}}


id: PBO:0057931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3658","termid":"PBO:0057931"}


id: MOD:01219
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:286#D","PubMed:9254591","PubMed:9750125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site D","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01219"}


id: GO:1903439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of calcitonin family receptor activity. Calcitonin family receptors may form dimers, trimers or tetramers; adrenomedullin and amylin receptors have only been observed as dimers so far.","definition_xrefs":["GOC:TermGenie","PMID:12037140","GO_REF:0000088","PMID:10871296","PMID:18687416","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor complex","termid":"GO:0097648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"calcitonin family receptor complex","termid":"GO:1903439"}


id: MONDO:0015186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare intestinal neoplasm.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of intestine (obsolete MONDO:0015186)","secondary_identifiers":["Orphanet:104011"],"synonyms":[{"name":"rare intestinal neoplasm","type":"exact"},{"name":"rare intestinal tumor","type":"exact"},{"name":"rare tumor of bowel","type":"exact"}],"termid":"MONDO:0015186","xrefs":{"Monarch":{"xref_id":"0015186"}}}


id: PBO:0036038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0036038"}


id: PBO:0030349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-complete_but_unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0030349"}


id: GO:0043101
data:
  {"annotated_genes":["SJAG_03881","SJAG_04123","SJAG_01859","SJAG_03298","SJAG_06634","SJAG_01070","SJAG_04634","SJAG_03096","SJAG_01500","SJAG_00134","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[118682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[75623,57284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[77324,102986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[77325,65881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[71590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[81771,72488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[62491,75121,95532,67824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[77326,110090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process that generates a purine-containing compound, any nucleobase, nucleoside, nucleotide or nucleic acid that contains a purine base, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01298":null,"SJAG_01500":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03298":null,"SJAG_03881":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"purine-containing compound salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-74217"],"synonyms":[{"name":"purine salvage","type":"related"}],"termid":"GO:0043101","terms_by_termid":{"GO:0006166":null,"GO:0006168":null,"GO:0006169":null,"GO:0006190":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0044209":null}}


id: MOD:00062
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to N-acetyl-L-tyrosine.","definition_xrefs":["PubMed:11857757","PubMed:15350136","PubMed:2506074","PubMed:11999733","RESID:AA0053","PubMed:475783","PubMed:12175151","PubMed:14730666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-tyrosine","synonyms":[{"name":"(2S)-2-acetamido-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylamino-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-(4-hydoxyphenyl)propanoic acid","type":"exact"},{"name":"AcTyr","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetyltyrosine","type":"exact"},{"name":"N-acetyl-L-tyrosine","type":"exact"},{"name":"N-acetylated L-tyrosine","type":"exact"},{"name":"N-acetyltyrosine","type":"exact"}],"termid":"MOD:00062"}


id: MONDO:0002979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated squamous cell carcinoma characterized by a papillary, exophytic growth pattern and hyperkeratosis. The most commonly affected anatomic sites are the larynx, penis, cervix, vagina, and vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"papillary carcinoma","termid":"MONDO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary squamous carcinoma","secondary_identifiers":["MEDGEN:83115","ICDO:8052/3","NCIT:C4102","UMLS:C0334244","DOID:4385"],"synonyms":[{"name":"papillary epidermoid carcinoma","type":"exact"},{"name":"papillary epidermoid cell carcinoma","type":"exact"},{"name":"papillary squamous carcinoma","type":"exact"},{"name":"papillary squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002979","xrefs":{"Monarch":{"xref_id":"0002979"}}}


id: PBO:0017444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-produces","termid":"PBO:0017444"}


id: MONDO:0013735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly-cerebellar hypoplasia-cardiac conduction defect syndrome is a rare, genetic congenital anomalies/dysmorphic syndrome characterized by growth failure, global developmental delay, profound intellectual disability, autistic behaviors, acquired second-degree heart block with bradycardia and vasomotor instability. Hands and feet present with long fusiform fingers, campto-clinodactyly and crowded toes while craniofacial dysmorphism includes microcephaly, broad forehead, thin eyebrows, upslanting palpebral fissures, large ears with prominent antihelix, prominent nose, long philtrum, thin upper lip vermillion and prominent lower lip. Neurological signs include hypotonia, brisk reflexes, dystonic-like movements and truncal ataxia and imaging shows cerebellar hypoplasia and simplified gyral pattern.","definition_xrefs":["Orphanet:329332"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-cerebellar hypoplasia-cardiac conduction defect syndrome","secondary_identifiers":["UMLS:C3280692","OMIM:614407","GARD:17502","MEDGEN:482322"],"synonyms":[{"name":"MCHCCD","type":"related"},{"name":"Zaki-Gleeson syndrome","type":"related"},{"name":"microcephaly, cerebellar hypoplasia, and CARDIAC conduction defect syndrome","type":"related"},{"name":"microcephaly-cerebellar hypoplasia-congenital heart conduction defect syndrome","type":"exact"}],"termid":"MONDO:0013735","xrefs":{"Monarch":{"xref_id":"0013735"}}}


id: GO:0030543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which copies of the 2-micrometer plasmid, found in fungi such as Saccharomyces, are distributed to daughter cells upon cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid partitioning","termid":"GO:0030541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-micrometer plasmid partitioning","termid":"GO:0030543"}


id: SO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site found in the chromosomes of less than five percent of the human population.","definition_xrefs":["PMID:16236432","PMID:17608616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare_fragile_site","termid":"SO:0002351"}


id: PBO:0087988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at positions 26-28, 34-36, 65, and 67 of tRNA; also acts on U2 snRNA; also pseudouridylates some mRNAs, and pseudouridylation level varies with growth phase; nuclear protein that appears to be involved in tRNA export; PUS1 has a paralog, PUS2, that arose from the whole genome duplication","termid":"PBO:0087988"}


id: MONDO:0004026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small, benign growth that arises from the skin. It is characterized by the presence of fibrovascular tissue lined by epidermis. It may be sessile or pendulous and usually occurs in sites where there is friction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reactive cutaneous fibrous lesion","termid":"MONDO:0006603"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin tag","secondary_identifiers":["MEDGEN:11452","SCTID:201091002","NCIT:C3374","UMLS:C0037293","DOID:6873"],"synonyms":[{"name":"acrochordon","type":"exact"},{"name":"cutaneous fibroepithelial polyp","type":"exact"},{"name":"cutaneous tag","type":"exact"},{"name":"fibroepithelial polyp","type":"related"},{"name":"fibroepithelial polyp of skin","type":"exact"},{"name":"fibroepithelial polyp of the skin","type":"exact"},{"name":"fibroma molle","type":"exact"},{"name":"soft fibroma","type":"exact"}],"termid":"MONDO:0004026","xrefs":{"Monarch":{"xref_id":"0004026"}}}


id: GO:1905452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in regulation of stem cell proliferation.","definition_xrefs":["GOC:PARL","GOC:bc","GOC:TermGenie","GO_REF:0000060","PMID:25640183"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of stem cell proliferation (obsolete GO:1905452)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in regulation of stem cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of stem cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of stem cell proliferation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in regulation of stem cell proliferation","type":"narrow"}],"termid":"GO:1905452"}


id: GO:0032483
data:
  {"annotated_genes":["SJAG_03488","SJAG_04329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71687,76559],"is_not":false,"summary":null,"term":"GO:0032483"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rab protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rab protein signal transduction","termid":"GO:0032482"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03488":null,"SJAG_04329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rab protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032483","terms_by_termid":{"GO:0032483":null}}


id: PBO:0057476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 595","termid":"PBO:0057476"}


id: PBO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.7","termid":"PBO:0000432"}


id: GO:0015822
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ornithine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-ornithine transport","type":"narrow"}],"termid":"GO:0015822","terms_by_termid":{"GO:1990575":null}}


id: GO:0035196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional miRNA. Includes the cleavage of stem-loop RNA precursors into microRNAs (miRNAs). miRNAs are a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.","definition_xrefs":["PMID:15066275","PMID:15066283","PMID:23985560","GOC:tb","PMID:28379604","GOC:aruk","GOC:dph","GOC:rl","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA processing","secondary_identifiers":["GO:0030918"],"synonyms":[{"name":"gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"miRNA biogenesis","type":"related"},{"name":"miRNA biosynthetic process","type":"broad"},{"name":"miRNA maturation","type":"exact"},{"name":"miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"microRNA biogenesis","type":"exact"},{"name":"microRNA biosynthesis","type":"broad"},{"name":"microRNA biosynthetic process","type":"broad"},{"name":"microRNA metabolic process","type":"broad"},{"name":"microRNA metabolism","type":"broad"},{"name":"microRNA processing","type":"exact"},{"name":"microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"production of microRNAs involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035196"}


id: SO:0000037
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA region that includes DNAse hypersensitive sites located near a gene that confers the high-level, position-independent, and copy number-dependent expression to that gene.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locus_control_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Locus_control_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:locus_control_region","type":"exact"},{"name":"LCR","type":"exact"},{"name":"locus control element","type":"related"},{"name":"locus control region","type":"exact"}],"termid":"SO:0000037"}


id: GO:1903295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutamate secretion, neurotransmission.","definition_xrefs":["GO_REF:0000058","PMID:16782817","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glutamate secretion","termid":"GO:0014050"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glutamatergic","termid":"GO:0051967"},{"relation_name":"is_a","term_name":"regulation of glutamate secretion, neurotransmission","termid":"GO:1903294"},{"relation_name":"negatively_regulates","term_name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate secretion, neurotransmission","synonyms":[{"name":"down regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"downregulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"inhibition of glutamate secretion, neurotransmission","type":"narrow"}],"termid":"GO:1903295"}


id: GO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of protein localisation to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","PMID:25063865","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein localization to phagocytic vesicle (obsolete GO:0036521)","synonyms":[{"name":"modulation by symbiont of host protein localisation to phagosome","type":"related"}],"termid":"GO:0036521"}


id: PBO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like 3'-5' exoribonuclease 2","termid":"PBO:0045030"}


id: GO:0002755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway in which the MyD88 adaptor molecule mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["GOC:add","PMID:15728447","PMID:12467241","PMID:12524386","ISBN:0781735149","PMID:12855817","PMID:15585605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-166058","Reactome:R-HSA-975871"],"synonyms":[{"name":"MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002755"}


id: GO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.2.2.-"],"termid":"GO:0016622"}


id: MONDO:0010623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis and male hypogonadism","secondary_identifiers":["Orphanet:431","MESH:C537365","UMLS:C1839989","MEDGEN:333456","SCTID:2355008","OMIM:308200","ICD9:759.89"],"synonyms":[{"name":"Ichthyosis-male hypogonadism syndrome","type":"exact"},{"name":"Ruds","type":"related"},{"name":"ichthyosis and male hypogonadism","type":"exact"},{"name":"rud syndrome","type":"related"}],"termid":"MONDO:0010623","xrefs":{"Monarch":{"xref_id":"0010623"}}}


id: PBO:0046418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A3","termid":"PBO:0046418"}


id: PATO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's width being notably higher than its length.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"broad","termid":"PATO:0002359"}


id: GO:2000732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of termination of RNA polymerase I transcription.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase I","termid":"GO:0045943"},{"relation_name":"is_a","term_name":"positive regulation of termination of DNA-templated transcription","termid":"GO:0060566"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase I transcription","termid":"GO:2000730"},{"relation_name":"positively_regulates","term_name":"termination of RNA polymerase I transcription","termid":"GO:0006363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"positive regulation of termination of RNA polymerase I transcription","synonyms":[{"name":"positive regulation of RNA polymerase I transcription termination","type":"exact"},{"name":"positive regulation of transcription termination from Pol I promoter","type":"exact"},{"name":"positive regulation of transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2000732"}


id: PBO:0045197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B8","termid":"PBO:0045197"}


id: SO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine","secondary_identifiers":["http://en.wikipedia.org/wiki/Queuosine","RNAMOD:043"],"synonyms":[{"name":" Q","type":"exact"}],"termid":"SO:0001317"}


id: PBO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein (predicted)","termid":"PBO:0005176"}


id: GO:0046876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3,4-didehydroretinal, a form of retinal that plays a role in the visual process in freshwater fish and some amphibians analogous to that of all-trans retinal in other vertebrates. 3,4-didehydro-11-cis-retinal combines with an opsin to form cyanopsin (cone) or porphyropsin (rod).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"3,4-didehydroretinal binding","synonyms":[{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"violet-sensitive opsin","type":"narrow"}],"termid":"GO:0046876"}


id: MONDO:0016738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary germ cell tumor of central nervous system (obsolete MONDO:0016738)","secondary_identifiers":["Orphanet:251995"],"synonyms":[{"name":"primary germ cell tumor of CNS","type":"exact"},{"name":"primary germ cell tumour of CNS","type":"exact"}],"termid":"MONDO:0016738","xrefs":{"Monarch":{"xref_id":"0016738"}}}


id: PBO:0054573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1975","termid":"PBO:0054573"}


id: MONDO:0006900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the connective and adipose tissues surrounding the kidney.","definition_xrefs":["MESH:D010501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"perinephritis","secondary_identifiers":["SCTID:111404004","MedDRA:10072058","EFO:1001099","DOID:2982","MEDGEN:10656","UMLS:C0031065"],"synonyms":[{"name":"inflammation of perirenal fat","type":"exact"},{"name":"perirenal fat inflammation","type":"exact"}],"termid":"MONDO:0006900","xrefs":{"Monarch":{"xref_id":"0006900"}}}


id: PBO:0080315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 79 pseudogene","termid":"PBO:0080315"}


id: PBO:0049058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 63","termid":"PBO:0049058"}


id: GO:0060521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range from urogenital sinus mesenchymal cells to cells of the urogenital epithelium resulting in the epithelial cells adopting a prostatic fate.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive mesenchymal to epithelial cell signaling","termid":"GO:0060522"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling involved in prostate gland development","termid":"GO:0060739"},{"relation_name":"part_of","term_name":"prostate induction","termid":"GO:0060514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in prostate induction","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in prostate induction","type":"exact"}],"termid":"GO:0060521"}


id: GO:0098837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A recycling endosome of the postsynapse. In postsynaptic terminals with dendritic spines, it is typically located at the base of a dendritic spine. It is involved in recycling of neurotransmitter receptors to the postsynaptic membrane. In some cases at least, this recycling is activated by postsynaptic signaling and so can play a role in long term potentiation.","definition_xrefs":["PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"},{"relation_name":"is_a","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"postsynaptic recycling endosome","synonyms":[{"name":"postsynaptic endosomal recycling compartment","type":"broad"},{"name":"postsynaptic recycling outpost","type":"exact"}],"termid":"GO:0098837"}


id: GO:0102303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + trans-resveratrol = 2 S-adenosyl-L-homocysteine + pterostilbene + 2 H+.","definition_xrefs":["EC:2.1.1.240","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"resveratrol 3,5-O-dimethyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12805","RHEA:32103"],"termid":"GO:0102303"}


id: PBO:0069361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 621, pseudogene","termid":"PBO:0069361"}


id: PBO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 7","termid":"PBO:0071401"}


id: PBO:0044748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 27","termid":"PBO:0044748"}


id: MONDO:1012296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hymen, imperforate, non-human animal","termid":"MONDO:1010279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imperforate hymen, horse","secondary_identifiers":["OMIA:001107-9796"],"termid":"MONDO:1012296","xrefs":{"Monarch":{"xref_id":"1012296"}}}


id: MONDO:0007645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric sneezing (obsolete MONDO:0007645)","secondary_identifiers":["MESH:C564990","OMIM:137130"],"synonyms":[{"name":"gastric sneezing","type":"exact"},{"name":"stomach sneeze reflex","type":"related"}],"termid":"MONDO:0007645","xrefs":{"Monarch":{"xref_id":"0007645"}}}


id: GO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of urea through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transporter activity","termid":"GO:0015204"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"urea channel activity","secondary_identifiers":["Reactome:R-HSA-507875","Reactome:R-HSA-507873"],"termid":"GO:0015265"}


id: PBO:0043356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 2","termid":"PBO:0043356"}


id: GO:0070341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fat cells by cell division, resulting in the expansion of their population. A fat cell is an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell proliferation","synonyms":[{"name":"adipocyte proliferation","type":"exact"},{"name":"adipose cell proliferation","type":"exact"}],"termid":"GO:0070341"}


id: GO:0010898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.","definition_xrefs":["GOC:tb","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride catabolic process","termid":"GO:0010896"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"positive regulation of triglyceride metabolic process","termid":"GO:0090208"},{"relation_name":"positively_regulates","term_name":"triglyceride catabolic process","termid":"GO:0019433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of triglyceride catabolic process","synonyms":[{"name":"positive regulation of triacylglycerol catabolic process","type":"exact"}],"termid":"GO:0010898"}


id: PBO:0070118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 32 pseudogene","termid":"PBO:0070118"}


id: MONDO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the breast characterized by pools of mucin and islands of malignant squamous cells. Mucoepidermoid carcinomas of the breast are extremely rare.","definition_xrefs":["NCIT:C5166"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaplastic breast carcinoma","termid":"MONDO:0006043"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucoepidermoid breast carcinoma","secondary_identifiers":["DOID:4679","MEDGEN:233721","UMLS:C1334813"],"synonyms":[{"name":"breast mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid breast carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of breast","type":"exact"},{"name":"mucoepidermoid carcinoma of the breast","type":"exact"}],"termid":"MONDO:0003087","xrefs":{"Monarch":{"xref_id":"0003087"}}}


id: MONDO:0018377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary disease with avascular necrosis (obsolete MONDO:0018377)","secondary_identifiers":["Orphanet:399185"],"termid":"MONDO:0018377","xrefs":{"Monarch":{"xref_id":"0018377"}}}


id: GO:1903156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any guanine transmembrane transporter activity that is involved in guanine import into cell.","definition_xrefs":["ISBN:0-8249-3695-6","GOC:dos","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine transmembrane transporter activity involved in guanine import into cell (obsolete GO:1903156)","synonyms":[{"name":"guanine transmembrane transporter activity involved in guanine import into cell","type":"exact"}],"termid":"GO:1903156"}


id: MONDO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Hirudinea.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hirudiniasis","secondary_identifiers":["ICD9:134.2","MEDGEN:507813","SCTID:64351000","ICD10CM:B88.3","UMLS:C0019575","DOID:11079"],"synonyms":[{"name":"Hirudinea caused disease or disorder","type":"exact"},{"name":"Hirudinea disease or disorder","type":"exact"},{"name":"Hirudinea infectious disease","type":"exact"},{"name":"leeches","type":"exact"}],"termid":"MONDO:0001191","xrefs":{"Monarch":{"xref_id":"0001191"}}}


id: PR:Q9P7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alg9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase alg9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.05","synonyms":[{"name":"Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alg9","type":"exact"},{"name":"asparagine-linked glycosylation protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q9"}


id: MONDO:0021386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the mediastinum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of mediastinum","secondary_identifiers":["UMLS:C0025063","NCIT:C3221","SCTID:126725000","ICD9:239.89","MEDGEN:44322"],"synonyms":[{"name":"mediastinal neoplasm","type":"exact"},{"name":"mediastinal tumor","type":"exact"},{"name":"mediastinal tumour","type":"exact"},{"name":"mediastinum neoplasm","type":"exact"},{"name":"mediastinum neoplasm (disease)","type":"exact"},{"name":"mediastinum tumor","type":"exact"},{"name":"mediastinum tumour","type":"exact"},{"name":"neoplasm of mediastinum","type":"exact"},{"name":"neoplasm of the mediastinum","type":"exact"},{"name":"tumor of mediastinum","type":"exact"},{"name":"tumor of the mediastinum","type":"exact"},{"name":"tumour of mediastinum","type":"exact"},{"name":"tumour of the mediastinum","type":"exact"}],"termid":"MONDO:0021386","xrefs":{"Monarch":{"xref_id":"0021386"}}}


id: GO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxyphenylacetate biosynthetic process (obsolete GO:0046233)","synonyms":[{"name":"3-hydroxyphenylacetate anabolism","type":"exact"},{"name":"3-hydroxyphenylacetate biosynthesis","type":"exact"},{"name":"3-hydroxyphenylacetate biosynthetic process","type":"exact"},{"name":"3-hydroxyphenylacetate formation","type":"exact"},{"name":"3-hydroxyphenylacetate synthesis","type":"exact"}],"termid":"GO:0046233"}


id: GO:0097596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A partial left-handed spiral array of microtubules that lies generally dorsal to the main ventral disc microtubule array in Giardia species (trophozoite stage).","definition_xrefs":["GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc supernumerary microtubule array","synonyms":[{"name":"supernumerary microtubule array","type":"broad"},{"name":"ventral disk supernumerary microtubule array","type":"related"}],"termid":"GO:0097596"}


id: PR:O74805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo51 gene.","definition_xrefs":["UniProtKB:O74805","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.14c","synonyms":[{"name":"Spom972h-myo51","type":"exact"},{"name":"myosin type V-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74805"}


id: GO:0033514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate L-pipecolate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via L-pipecolate","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via L-pipecolate","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via L-pipecolate","type":"exact"}],"termid":"GO:0033514"}


id: GO:0015210
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of uracil, 2,4-dioxopyrimidine, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"uracil transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil/uridine permease activity","type":"related"}],"termid":"GO:0015210","terms_by_termid":{"GO:0015505":null}}


id: PBO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic adaptor Any2 (predicted)","termid":"PBO:0016065"}


id: MONDO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atopic conjunctivitis that is of relatively short duration and that has a rapid onset.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"},{"relation_name":"is_a","term_name":"atopic conjunctivitis","termid":"MONDO:0005642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"Angelucci syndrome","secondary_identifiers":["UMLS:C0001309","MEDGEN:1316","ICD9:372.05","DOID:11203","ICD10CM:H10.1","NCIT:C34353","SCTID:67678004"],"synonyms":[{"name":"Angelucci syndrome","type":"exact"},{"name":"Angelucci's syndrome","type":"exact"},{"name":"acute atopic conjunctivitis","type":"exact"}],"termid":"MONDO:0001224","xrefs":{"Monarch":{"xref_id":"0001224"}}}


id: FYPO:0008325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular phenotype observed in the vegetative growth phase of the life cycle in which the total cytosolic ribosome content (monosomes + polysomes) in a cell is higher than normal.","definition_xrefs":["PMID:39358553","PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cytosolic ribosome content","termid":"FYPO:0008325"}


id: MONDO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sensorineural hearing loss which develops suddenly over a period of hours or a few days. It varies in severity from mild to total deafness. Sudden deafness can be due to head trauma, vascular diseases, infections, or can appear without obvious cause or warning.","definition_xrefs":["MESH:D003639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden hearing loss disorder","termid":"MONDO:0020677"},{"relation_name":"is_a","term_name":"sensorineural hearing loss disorder","termid":"MONDO:0020678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden sensorineural hearing loss","secondary_identifiers":["GARD:12927","MEDGEN:907022","Orphanet:90059","SCTID:715239002","UMLS:C4275242"],"synonyms":[{"name":"acute sensorineural hearing loss by acute acoustic trauma or sudden deafness or surgery induced acoustic trauma","type":"related"},{"name":"deafness, sudden","type":"related"},{"name":"sudden deafness","type":"related"},{"name":"sudden hearing loss","type":"broad"},{"name":"sudden sensorineural hearing loss","type":"exact"}],"termid":"MONDO:0043373","xrefs":{"Monarch":{"xref_id":"0043373"}}}


id: GO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"bicarbonate transport","secondary_identifiers":["Reactome:R-HSA-1480926","Reactome:R-HSA-425381","Reactome:R-HSA-1475029"],"synonyms":[{"name":"hydrogencarbonate transport","type":"exact"}],"termid":"GO:0015701"}


id: FYPO:0007335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at centromere inner repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished chromatin silencing at centromere inner repeat","synonyms":[{"name":"abolished chromatin silencing at centromere imr","type":"exact"},{"name":"abolished chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"abolished heterochromatin silencing at centromere inner repeat","type":"exact"},{"name":"chromatin silencing at centromere inner repeatabolished","type":"exact"}],"termid":"FYPO:0007335"}


id: PBO:0059936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 22","termid":"PBO:0059936"}


id: GO:1905395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a flavonoid stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22700048","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flavonoid","termid":"GO:1905395"}


id: MONDO:0007792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A familial hypocalciuric hypercalcemia that has material basis in heterozygous mutation in the GNA11 gene on chromosome 19p13.","definition_xrefs":["DOID:0060701","PMID:23802516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypocalciuric hypercalcemia","termid":"MONDO:0018458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial hypocalciuric hypercalcemia 2","secondary_identifiers":["GARD:9758","MESH:C537146","Orphanet:101049","UMLS:C1840347","OMIM:145981","MEDGEN:374447"],"synonyms":[{"name":"FBH2","type":"related"},{"name":"FHH type 2","type":"exact"},{"name":"HHC2","type":"exact"},{"name":"familial benign hypercalcemia, type 2","type":"related"},{"name":"familial hypocalciuric hypercalcemia type 2","type":"exact"},{"name":"hpocalciuric hypercalcemia, type II","type":"exact"},{"name":"hypercalcemia, familial benign type 2","type":"related"},{"name":"hypercalcemia, familial benign, type 2","type":"related"},{"name":"hypocalciuric hypercalcemia type II","type":"exact"},{"name":"hypocalciuric hypercalcemia, familial, type 2","type":"related"},{"name":"hypocalciuric hypercalcemia, familial, type II","type":"related"}],"termid":"MONDO:0007792","xrefs":{"Monarch":{"xref_id":"0007792"}}}


id: MONDO:0014044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by distinctive facial features, cleft palate, conductive hearing loss, and mild developmental delay. The craniofacial dysmorphism included low frontal hairline, ptosis, prominent eyes, flat midface, Cupid's bow configuration of the upper lip, and low-set, posteriorly rotated small ears.","definition_xrefs":["OMIM:615102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism-conductive hearing loss-heart defect syndrome","secondary_identifiers":["GARD:17328","MEDGEN:767688","UMLS:C3554774","SCTID:763279007","Orphanet:289553"],"synonyms":[{"name":"TYSHCHENKO syndrome","type":"related"}],"termid":"MONDO:0014044","xrefs":{"Monarch":{"xref_id":"0014044"}}}


id: PBO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase Lcb2 (predicted)","termid":"PBO:0002441"}


id: PBO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 24","termid":"PBO:0072093"}


id: GO:0009835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An developmental maturation process that has as participant a fruit. Ripening causes changes in one or more characteristics of a fruit (color, aroma, flavor, texture, hardness, cell wall structure) and may make it more attractive to animals and aid in seed dispersal.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit ripening","secondary_identifiers":["Wikipedia:Ripening"],"synonyms":[{"name":"fruit maturation","type":"related"},{"name":"fruit senescence","type":"related"}],"termid":"GO:0009835"}


id: PBO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 12","termid":"PBO:0052644"}


id: PATO:0000734
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000734 abdominal tone value (obsolete PATO:0000734)","termid":"PATO:0000734"}


id: MOD:01063
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monomethylated phenylalanine.","definition_xrefs":["DeltaMass:198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated phenylalanine","termid":"MOD:00717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated phenylalanine","synonyms":[{"name":"NMePhe","type":"exact"}],"termid":"MOD:01063"}


id: GO:1900125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of hyaluronan biosynthetic process","synonyms":[{"name":"regulation of hyaluronan anabolism","type":"exact"},{"name":"regulation of hyaluronan biosynthesis","type":"exact"},{"name":"regulation of hyaluronan formation","type":"exact"},{"name":"regulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900125"}


id: MONDO:1011430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, non-human animal","secondary_identifiers":["OMIA:000181"],"termid":"MONDO:1011430","xrefs":{"Monarch":{"xref_id":"1011430"}}}


id: PBO:0086502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative positive regulator of mannosylphosphate transferase Mnn6p; involved in mannosylphosphorylation of N-linked oligosaccharides; may also function as a mannosylphosphate transferase; expression increases in late-logarithmic and stationary growth phases; coding sequence contains length polymorphisms in different strains; MNN4 has a paralog, YJR061W, that arose from the whole genome duplication","termid":"PBO:0086502"}


id: PBO:0067365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 465, pseudogene","termid":"PBO:0067365"}


id: PBO:0116780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 7 (gene/pseudogene)","termid":"PBO:0116780"}


id: PBO:0085019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinamide riboside kinase; catalyzes the phosphorylation of nicotinamide riboside and nicotinic acid riboside in salvage pathways for NAD+ biosynthesis","termid":"PBO:0085019"}


id: MONDO:0015895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with hypoparathyroidism (obsolete MONDO:0015895)","secondary_identifiers":["NANDO:2100124","NANDO:1200775","NANDO:2200345","Orphanet:181402"],"termid":"MONDO:0015895","xrefs":{"Monarch":{"xref_id":"0015895"}}}


id: PBO:0029081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_spindle_pole_body","termid":"PBO:0029081"}


id: GO:0022829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of propanediol through a large pore, un-gated channel. Examples include gap junctions, which transport substances from one cell to another; and porins which transport substances in and out of bacteria, mitochondria and chloroplasts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"wide pore channel activity","synonyms":[{"name":"gap junction activity","type":"narrow"},{"name":"non-gated, wide pore channel activity","type":"exact"}],"termid":"GO:0022829"}


id: PBO:0070067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 24, pseudogene","termid":"PBO:0070067"}


id: MONDO:0968947
data:
  {"annotated_genes":["SJAG_04936"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88927],"is_not":false,"summary":null,"term":"MONDO:0968947"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder plus optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620784","UMLS:C5935605","MEDGEN:1859522"],"termid":"MONDO:0968947","terms_by_termid":{"MONDO:0968947":null},"xrefs":{"Monarch":{"xref_id":"0968947"}}}


id: PATO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having medium brightness and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark pale pink","secondary_identifiers":["PATO:0001279"],"synonyms":[{"name":"bright pink ","type":"related"}],"termid":"PATO:0001280"}


id: MONDO:0009448
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87967],"is_not":false,"summary":null,"term":"MONDO:0009448"}]},"cv_name":"mondo","definition":"A metabolic disorder resulting from defective renal tube reabsorption of proline, hydroxyproline and glycine. The prevalence is estimated at around 1 in 15 000. The disorder is usually asymptomatic and is identified fortuitously by detection of increased levels of the imino acids and glycine in the urine. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:42062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"iminoglycinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:242600","UMLS:C0268654","ICD9:270.8","GARD:8424","icd11.foundation:664428532","MEDGEN:124342","MESH:C536285","DOID:0112265","SCTID:84121007"],"synonyms":[{"name":"iminoglycinuria","type":"exact"},{"name":"iminoglycinuria, digenic","type":"exact"}],"termid":"MONDO:0009448","terms_by_termid":{"MONDO:0009448":null},"xrefs":{"Monarch":{"xref_id":"0009448"}}}


id: PBO:0029486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_ergosterol_level","termid":"PBO:0029486"}


id: PBO:0054546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1946","termid":"PBO:0054546"}


id: PBO:0117251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoate-protein ligase A","termid":"PBO:0117251"}


id: GO:0060666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a salivary epithelial cord bifurcates at its end.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of terminal units involved in salivary gland branching","termid":"GO:0060666"}


id: MONDO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by the human immunodeficiency virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral sexually transmitted disease","termid":"MONDO:0021682"},{"relation_name":"is_a","term_name":"lentivirus infection","termid":"MONDO:0022034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV infectious disease","secondary_identifiers":["MESH:D015658","SCTID:86406008","ICD9:042","DOID:526","ICD10CM:B20-B20","NANDO:2200810","NCIT:C3108","UMLS:C0019693","EFO:0000764","MEDGEN:5583","ICD9:042-042"],"synonyms":[{"name":"HIV infection","type":"exact"},{"name":"Human immunodeficiency virus caused disease or disorder","type":"exact"},{"name":"Human immunodeficiency virus disease or disorder","type":"exact"},{"name":"Human immunodeficiency virus infectious disease","type":"exact"},{"name":"human immunodeficiency virus infectious disease","type":"related"}],"termid":"MONDO:0005109","xrefs":{"Monarch":{"xref_id":"0005109"}}}


id: PBO:0038660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACR pseudogene 1","termid":"PBO:0038660"}


id: PBO:0005044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Hif2","termid":"PBO:0005044"}


id: PBO:0038757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 2","termid":"PBO:0038757"}


id: PBO:0083294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene GLN4/YOR168W","termid":"PBO:0083294"}


id: PBO:0068253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N5","termid":"PBO:0068253"}


id: MONDO:0100375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(15;17)(q24;q21). (A chromosomal translocation associated with creation of a fusion between the PML and RARA genes. It is seen in variants of acute promyelocytic leukemia.)","definition_xrefs":["NCIT:C27758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(15;17)(q24;q21)","secondary_identifiers":["NCIT:C36055"],"synonyms":[{"name":"AML, t(15;17)(q22;q12)","type":"exact"},{"name":"AML, t(15;17)(q22;q21)","type":"exact"},{"name":"AML, t(15;17)(q24;q21)","type":"exact"}],"termid":"MONDO:0100375","xrefs":{"Monarch":{"xref_id":"0100375"}}}


id: PBO:0079485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXN2 pseudogene 1","termid":"PBO:0079485"}


id: PBO:0041170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 4","termid":"PBO:0041170"}


id: SO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. GGTTTTTGT), part of a five_prime_D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_nonamer","synonyms":[{"name":"5'D-NONAMER","type":"exact"},{"name":"five prime D nonamer","type":"exact"}],"termid":"SO:0000497"}


id: GO:0150167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K4 acetylation.","definition_xrefs":["GOC:aruk","PMID:20737563"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 acetylation (obsolete GO:0150167)","termid":"GO:0150167"}


id: PATO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed transversely.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transverse orientation","synonyms":[{"name":"transversely oriented","type":"exact"}],"termid":"PATO:0002502"}


id: GO:0035241
data:
  {"annotated_genes":["SJAG_03548","SJAG_02756"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102210,114504],"is_not":false,"summary":null,"term":"GO:0035241"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of a methyl group to either of the unmethylated terminal nitrogen atoms (also called omega nitrogen) in peptidyl-arginine to form an omega-N-G-monomethylated arginine residue. The reaction is S-adenosyl-L-methionine + [protein]-L-arginine = S-adenosyl-L-homocysteine + [protein]-Nomega-methyl-L-arginine.","definition_xrefs":["PMID:14705965","EC:2.1.1.321","RESID:AA0069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02756":null,"SJAG_03548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008276","GO:0016740","GO:0016741","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein-arginine omega-N monomethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:48100"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega-methyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N monomethylase activity","type":"exact"},{"name":"type III protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035241","terms_by_termid":{"GO:0035241":null}}


id: PBO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 7 pseudogene","termid":"PBO:0062076"}


id: GO:0046831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"regulates","term_name":"RNA export from nucleus","termid":"GO:0006405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of RNA export from nucleus","synonyms":[{"name":"regulation of RNA export from cell nucleus","type":"exact"},{"name":"regulation of RNA export out of nucleus","type":"exact"},{"name":"regulation of RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of RNA-nucleus export","type":"exact"}],"termid":"GO:0046831"}


id: PBO:0089148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA:L-glutamate N-acetyltransferase","termid":"PBO:0089148"}


id: PBO:0051547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7","termid":"PBO:0051547"}


id: FYPO:0004351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to methylglyoxal","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to methylglyoxal","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during cellular response to methylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0004351"}


id: GO:2000287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of myotome development","termid":"GO:2000290"},{"relation_name":"positively_regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotome development","termid":"GO:2000287"}


id: SO:0001202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ambisense_RNA_virus is a ss_RNA_viral_sequence that is the sequence of a single stranded RNA virus with both messenger and anti messenger polarity.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_RNA_viral_sequence","termid":"SO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ambisense_ssRNA_viral_sequence","synonyms":[{"name":"ambisense single stranded RNA virus","type":"exact"},{"name":"ambisense ssRNA viral sequence","type":"exact"}],"termid":"SO:0001202"}


id: GO:0003231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac ventricle over time, from its formation to the mature structure. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac ventricle development","termid":"GO:0003231"}


id: MONDO:1011779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, non-human animal","secondary_identifiers":["OMIA:001094"],"termid":"MONDO:1011779","xrefs":{"Monarch":{"xref_id":"1011779"}}}


id: MOD:01566
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01566"}


id: PATO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000611 absolute orientation value (obsolete PATO:0000611)","termid":"PATO:0000611"}


id: GO:1904821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a chloroplast into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:26494759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast organization","termid":"GO:0009658"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast disassembly","synonyms":[{"name":"chloroplast degradation","type":"related"}],"termid":"GO:1904821"}


id: MONDO:0007664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any juvenile glaucoma in which the cause of the disease is a mutation in the MYOC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile open angle glaucoma","termid":"MONDO:0020367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 1, open angle, A","secondary_identifiers":["GARD:9485","MESH:C564234","OMIM:137750","UMLS:C1842028","MEDGEN:333974"],"synonyms":[{"name":"GLC1A","type":"related"},{"name":"JOAG1","type":"broad"},{"name":"JOAG1A","type":"exact"},{"name":"MYOC juvenile glaucoma","type":"exact"},{"name":"MYOC juvenile open angle glaucoma","type":"exact"},{"name":"glaucoma 1, open angle, 50","type":"related"},{"name":"glaucoma 1, open angle, A","type":"exact"},{"name":"glaucoma 1, open angle, type A","type":"exact"},{"name":"glaucoma 1A, primary open angle","type":"exact"},{"name":"glaucoma hereditary, juvenile","type":"related"},{"name":"glaucoma, primary open angle, juvenile-onset, 1","type":"related"},{"name":"juvenile glaucoma caused by mutation in MYOC","type":"exact"},{"name":"juvenile open angle glaucoma caused by mutation in MYOC","type":"exact"},{"name":"primary open angle glaucoma juvenile onset 1","type":"related"}],"termid":"MONDO:0007664","xrefs":{"Monarch":{"xref_id":"0007664"}}}


id: PBO:0051593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL21 antisense RNA 1","termid":"PBO:0051593"}


id: PBO:0041941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 9","termid":"PBO:0041941"}


id: PBO:0003178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo70 (predicted)","termid":"PBO:0003178"}


id: PBO:0075450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 3","termid":"PBO:0075450"}


id: PBO:0056621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 1","termid":"PBO:0056621"}


id: PATO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Acyclic cyclicity inheres in a molecule when the atoms within the molecule do not contain at least one cycle in the atom-atom connection paths (through the bonds).","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclicity","termid":"PATO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyclic cyclicity","termid":"PATO:0002185"}


id: PBO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 38","termid":"PBO:0080075"}


id: GO:2000814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of barbed-end actin filament capping","termid":"GO:2000812"},{"relation_name":"positively_regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0030036","GO:0065003","GO:0007010"],"is_obsolete":false,"name":"positive regulation of barbed-end actin filament capping","synonyms":[{"name":"positive regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"positive regulation of barbed-end actin capping activity","type":"exact"},{"name":"positive regulation of plus-end F-actin capping activity","type":"exact"},{"name":"positive regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000814"}


id: PBO:0083340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORF YDL010W","termid":"PBO:0083340"}


id: PBO:0049895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 5","termid":"PBO:0049895"}


id: MONDO:0000725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Simpson-Golabi-Behmel syndrome (obsolete MONDO:0000725)","termid":"MONDO:0000725","xrefs":{"Monarch":{"xref_id":"0000725"}}}


id: GO:0004638
data:
  {"annotated_genes":["SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65361],"is_not":false,"summary":null,"term":"GO:0004638"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + 2 H+ = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO2.","definition_xrefs":["EC:4.1.1.21","RHEA:10792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-73806","MetaCyc:AIRCARBOXY-RXN","KEGG_REACTION:R04209"],"synonyms":[{"name":"1-(5-phosphoribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase [5-amino-1-(5-phospho-D-ribosyl)imidazole-forming]","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-ribosylimidazole 5-phosphate carboxylase activity","type":"related"},{"name":"5-phosphoribosyl-5-aminoimidazole carboxylase activity","type":"related"},{"name":"ADE2","type":"related"},{"name":"AIR carboxylase activity","type":"related"},{"name":"class II PurE","type":"related"}],"termid":"GO:0004638","terms_by_termid":{"GO:0004638":null}}


id: PR:Q9USN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serologically defined colon cancer antigen 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15239:SF0","PRO:DNx","OMA:SCHPO04637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC132.01c","secondary_identifiers":["UniProtKB:Q9USN8"],"synonyms":[{"name":"Spom972h-NEMF","type":"exact"},{"name":"microtubule regulator protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN8"}


id: PBO:0082375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor from ATF/CREB family involved in stress-responsive regulatory network; mediates transcriptional activation of NCE103 in response to low CO2 levels; proposed to be a regulator of oleate responsive genes; involved in utilization of non-optimal carbon sources and chromosome stability; relocalizes to the cytosol in response to hypoxia; CST6 has a paralog, ACA1, that arose from the whole genome duplication","termid":"PBO:0082375"}


id: MONDO:0003594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm characterized by the presence of a combination of liposarcomatous morphologic subtypes: myxoid/round cell and well differentiated/dedifferentiated liposarcoma or myxoid/round cell and pleomorphic liposarcoma.","definition_xrefs":["NCIT:C4253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed liposarcoma","secondary_identifiers":["MEDGEN:87249","UMLS:C0334472","ICDO:8855/3","DOID:5703"],"synonyms":[{"name":"mixed liposarcoma","type":"exact"},{"name":"mixed liposarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003594","xrefs":{"Monarch":{"xref_id":"0003594"}}}


id: PBO:0069454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 719, pseudogene","termid":"PBO:0069454"}


id: GO:0045889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of homeotic genes of the Polycomb group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription of homeotic gene (Polycomb group) (obsolete GO:0045889)","synonyms":[{"name":"positive regulation of transcription of homeotic gene (Polycomb group)","type":"exact"}],"termid":"GO:0045889"}


id: GO:0019120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid halide bond in substances containing halogen atoms in organic linkage.","definition_xrefs":["EC:3.8.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds","termid":"GO:0016824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}


id: MONDO:0009935
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88381,88382],"is_not":false,"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary pulmonary hypertension","termid":"MONDO:0001999"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary hypertension, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:265400","MESH:C564862","MEDGEN:1802382","UMLS:C5676877"],"synonyms":[{"name":"pulmonary hypertension, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0009935","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0009935"}}}


id: MONDO:0014676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the LMNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Emery-Dreifuss muscular dystrophy","termid":"MONDO:0016830"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 3, autosomal recessive","secondary_identifiers":["UMLS:C2750035","DOID:0070248","OMIM:616516","GARD:18209","MEDGEN:413212","MESH:C567633"],"synonyms":[{"name":"EDMD3","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 3, autosomal recessive","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 3, autosomal recessive","type":"exact"},{"name":"LMNA autosomal recessive Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal recessive Emery-Dreifuss muscular dystrophy caused by mutation in LMNA","type":"exact"}],"termid":"MONDO:0014676","xrefs":{"Monarch":{"xref_id":"0014676"}}}


id: GO:0015421
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77307],"is_not":false,"summary":null,"term":"GO:0015421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + oligopeptide(out) = ADP + phosphate + oligopeptide(in).","definition_xrefs":["RHEA:14429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type oligopeptide transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5223317","MetaCyc:3.6.3.23-RXN","EC:7.4.2.6"],"synonyms":[{"name":"ABC-type oligopeptide transporter","type":"exact"},{"name":"ATP-dependent oligopeptide transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled oligopeptide transmembrane transporter activity","type":"related"},{"name":"oligopeptide ABC transporter","type":"narrow"},{"name":"oligopeptide permease activity","type":"related"},{"name":"oligopeptide-transporting ATPase activity","type":"related"}],"termid":"GO:0015421","terms_by_termid":{"GO:0015421":null}}


id: SO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glutamine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_glutamine","secondary_identifiers":["MOD:00907"],"synonyms":[{"name":"ModGln","type":"exact"},{"name":"modified L glutamine","type":"exact"},{"name":"modified L-glutamine","type":"exact"}],"termid":"SO:0001394"}


id: MONDO:0011711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language impairment","termid":"MONDO:0000724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment 2","secondary_identifiers":["UMLS:C1847605","MEDGEN:338273","OMIM:606712"],"synonyms":[{"name":"SLI2","type":"exact"},{"name":"specific language impairment 2","type":"exact"},{"name":"specific language impairment QTL, 2","type":"exact"},{"name":"specific language impairment quantitative trait locus on chromosome 19","type":"related"}],"termid":"MONDO:0011711","xrefs":{"Monarch":{"xref_id":"0011711"}}}


id: PBO:0059039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 26","termid":"PBO:0059039"}


id: PR:Q09173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.07c","synonyms":[{"name":"PP2C-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptc3","type":"exact"}],"termid":"PR:Q09173"}


id: GO:0060855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of venous endothelial cells out of the veins giving rise to the precursors of lymphatic endothelial cells.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"lymph vessel development","termid":"GO:0001945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous endothelial cell migration involved in lymph vessel development","termid":"GO:0060855"}


id: PATO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being fully formed compared to entities lacking parts.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete structure","termid":"PATO:0005012"}


id: PBO:0082302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asn rich cytoplasmic protein that contains RGG motifs; high-copy suppressor of group II intron-splicing defects of a mutation in MRS2 and of a conditional mutation in POL1 (DNA polymerase alpha); possible role in mitochondrial mRNA splicing","termid":"PBO:0082302"}


id: PBO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence updated","termid":"PBO:0002438"}


id: GO:0052013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host macromolecule (obsolete GO:0052013)","synonyms":[{"name":"catabolism by organism of host macromolecule","type":"exact"}],"termid":"GO:0052013"}


id: PBO:0048162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 7","termid":"PBO:0048162"}


id: MONDO:0800365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX14 defect","termid":"MONDO:0100268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005244","MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group K","secondary_identifiers":["UMLS:C1866257","MEDGEN:356487"],"synonyms":[{"name":"CGK","type":"exact"}],"termid":"MONDO:0800365","xrefs":{"Monarch":{"xref_id":"0800365"}}}


id: SO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"forward","termid":"SO:0001030"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward_primer","synonyms":[{"name":"DNA forward primer","type":"exact"},{"name":"forward DNA primer","type":"exact"},{"name":"forward primer","type":"exact"},{"name":"forward primer oligo","type":"exact"},{"name":"forward primer oligonucleotide","type":"exact"},{"name":"forward primer polynucleotide","type":"exact"},{"name":"forward primer sequence","type":"exact"}],"termid":"SO:0000121"}


id: PBO:0091148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidylserine translocation complex subunit Mdm35","termid":"PBO:0091148"}


id: GO:0015429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal fatty acyl transporter (obsolete GO:0015429)","synonyms":[{"name":"peroxisomal fatty acyl transporter","type":"exact"}],"termid":"GO:0015429"}


id: PBO:0047510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 2","termid":"PBO:0047510"}


id: FYPO:0004100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, is elongated, and contains a nucleus with abnormal morphology.","definition_xrefs":["PMID:7957061","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000004","FYPO:0002403","FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated cell with abnormal nuclear morphology","synonyms":[{"name":"inviable following spore germination, without cell division, elongated cell with abnormal chromosome morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated cell with abnormal chromosome morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated cell with abnormal nuclear morphology","type":"exact"}],"termid":"FYPO:0004100"}


id: MONDO:0013800
data:
  {"annotated_genes":["SJAG_01005"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88189],"is_not":false,"summary":null,"term":"MONDO:0013800"}]},"cv_name":"mondo","definition":"A form of Ehlers-Danlos syndrome, characterized by severe generalized hypotonia at birth with severe early-onset kyphoscolosis along with joint hypermobility (without contractures) leading to recurrent dislocations, and sensorineural hearing impairment.","definition_xrefs":["Orphanet:300179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01005":null},"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, kyphoscoliotic type, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720859009","MEDGEN:482790","GARD:17361","UMLS:C3281160","OMIM:614557"],"synonyms":[{"name":"EDS with progressive kyphoscoliosis, myopathy, and deafness","type":"exact"},{"name":"EDS with progressive kyphoscoliosis, myopathy, and hearing loss","type":"exact"},{"name":"EDS, kyphoscoliotic and hearing loss type","type":"exact"},{"name":"EDSKMH","type":"related"},{"name":"EDSKSCL2","type":"related"},{"name":"Ehlers-Danlos syndrome with progressive kyphoscoliosis, myopathy, and deafness","type":"exact"},{"name":"Ehlers-Danlos syndrome with progressive kyphoscoliosis, myopathy, and hearing loss","type":"exact"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic and deafness type","type":"exact"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic and hearing loss type","type":"exact"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic type, 2","type":"exact"}],"termid":"MONDO:0013800","terms_by_termid":{"MONDO:0013800":null},"xrefs":{"Monarch":{"xref_id":"0013800"}}}


id: GO:0014037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell differentiation","termid":"GO:0014037"}


id: SO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region specifically recognised by a recombinase, which inserts or removes another region marked by a distinct cognate integration/excision site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integration_excision_site","synonyms":[{"name":"attachment site","type":"related"},{"name":"integration excision site","type":"exact"}],"termid":"SO:0000946"}


id: MOD:00153
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 3'-(8alpha-FAD)-L-histidine.","definition_xrefs":["PubMed:8076","Unimod:50#H","PubMed:241294","RESID:AA0144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(8alpha-FAD)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-(8alpha-FAD)-L-histidine","type":"exact"},{"name":"8alpha-(N(delta)-histidyl)FAD","type":"exact"},{"name":"8alpha-(N3'-histidyl)FAD","type":"exact"},{"name":"8alpha-N1-histidyl FAD","type":"related"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES Pros-8alpha-FAD histidine","type":"exact"},{"name":"N(pi)-(8alpha-FAD)-histidine","type":"exact"},{"name":"Np8aFADHis","type":"exact"},{"name":"pros-(8alpha-FAD)-histidine","type":"exact"}],"termid":"MOD:00153"}


id: GO:0046034
data:
  {"annotated_genes":["SJAG_02009","SJAG_01310","SJAG_00915","SJAG_06622","SJAG_02107","SJAG_02945","SJAG_04192","SJAG_03660","SJAG_00461","SJAG_02038","SJAG_04334","SJAG_03828","SJAG_07003","SJAG_06621","SJAG_04122","SJAG_02105","SJAG_MIT15","SJAG_03114","SJAG_00985","SJAG_00839","SJAG_04422","SJAG_04495","SJAG_02564","SJAG_01471","SJAG_02369","SJAG_03373","SJAG_00133","SJAG_03925","SJAG_03903","SJAG_00685","SJAG_05204","SJAG_04048","SJAG_MIT09","SJAG_02785","SJAG_00836","SJAG_00438","SJAG_02796","SJAG_02598","SJAG_00027","SJAG_05314","SJAG_00542","SJAG_MIT37","SJAG_00136","SJAG_00605","SJAG_02135"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59762,68825,68905],"is_not":false,"summary":null,"term":"GO:0046034"},{"annotations":[100047,96301,107629,111213,74116,99776,79530,105179,107260,111214,111219,111217,107258,105436,107628,118191,111215,111216,111218,107259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[77826,74768],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[119856],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[106817,104834,120942,94626,96624,109623,109715,103613,95053,105448,117686,120936,90901,95644,120930,105474,110607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[71694],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ATP metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ATP metabolism","type":"exact"}],"termid":"GO:0046034","terms_by_termid":{"GO:0006110":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:1905707":null}}


id: MONDO:0035112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia with BCR-ABL1","secondary_identifiers":["Orphanet:585867","UMLS:C4329268","DOID:0080976","MEDGEN:1377153","NCIT:C129785","GARD:22340"],"synonyms":[{"name":"AML with BCR-ABL1","type":"exact"},{"name":"AML with t(9;22)(q34.1;q11.2)","type":"exact"},{"name":"acute myeloid leukaemia with t(9;22)(q34.1;q11.2)","type":"exact"},{"name":"acute myeloid leukemia with t(9;22)(q34.1;q11.2)","type":"exact"}],"termid":"MONDO:0035112","xrefs":{"Monarch":{"xref_id":"0035112"}}}


id: PBO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 3","termid":"PBO:0047342"}


id: PBO:0076528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 41","termid":"PBO:0076528"}


id: SO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase II binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_promoter","synonyms":[{"name":"RNA polymerase B promoter","type":"exact"},{"name":"RNApol II promoter","type":"exact"},{"name":"pol II promoter","type":"related"},{"name":"polymerase II promoter","type":"exact"}],"termid":"SO:0000170"}


id: PATO:0001552
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process which is lower than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity of a process","synonyms":[{"name":"decreased sensitivity of occurrent","type":"exact"},{"name":"low sensitivity of occurrent","type":"exact"}],"termid":"PATO:0001552"}


id: MOD:00890
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to a phosphorylated L-histidine, such as pros-phosphohistidine, or tele-phosphohistidine.","definition_xrefs":["Unimod:21#H","OMSSA:192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"phosphorylated L-histidine","synonyms":[{"name":"NPhosHis","type":"exact"},{"name":"Phospho","type":"related"},{"name":"mod192","type":"exact"},{"name":"phosphohistidine","type":"exact"}],"termid":"MOD:00890"}


id: PBO:0067569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 724, pseudogene","termid":"PBO:0067569"}


id: GO:0033884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: O-phosphoethanolamine + H2O = ethanolamine + phosphate, and phosphocholine + H2O = choline + phosphate.","definition_xrefs":["EC:3.1.3.75"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphoethanolamine/phosphocholine phosphatase activity (obsolete GO:0033884)","synonyms":[{"name":"phosphoethanolamine/phosphocholine phosphatase activity","type":"exact"}],"termid":"GO:0033884"}


id: FYPO:0004805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall organization is abnormal. Cell wall organization results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GO:0031505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall organization","synonyms":[{"name":"abnormal cell wall organisation","type":"related"},{"name":"abnormal fungal-type cell wall organization","type":"exact"}],"termid":"FYPO:0004805"}


id: PBO:0068362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 144B","termid":"PBO:0068362"}


id: PBO:0070041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1338, pseudogene","termid":"PBO:0070041"}


id: PBO:0071216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 57","termid":"PBO:0071216"}


id: GO:0010803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the tumor necrosis factor-mediated signaling pathway. The tumor necrosis factor-mediated signaling pathway is the series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"tumor necrosis factor-mediated signaling pathway","termid":"GO:0033209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of tumor necrosis factor-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-5357905"],"synonyms":[{"name":"regulation of TNF signaling","type":"exact"},{"name":"regulation of TNF-mediated signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0010803"}


id: PBO:0031306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell","termid":"PBO:0031306"}


id: FYPO:0008041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in a cell is lower than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-4,5-bisphosphate level","synonyms":[{"name":"decreased phosphatidylinositol-4,5-bisphosphate level in cell","type":"exact"}],"termid":"FYPO:0008041"}


id: MONDO:0859201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with impaired language and ataxia and with or without seizures","secondary_identifiers":["MEDGEN:1794216","OMIM:619580","UMLS:C5562006"],"termid":"MONDO:0859201","xrefs":{"Monarch":{"xref_id":"0859201"}}}


id: GO:0009628
data:
  {"annotated_genes":["SJAG_04018","SJAG_01262","SJAG_02091","SJAG_01648","SJAG_04190","SJAG_04877","SJAG_02592","SJAG_02860","SJAG_00642","SJAG_01584","SJAG_02818","SJAG_02381","SJAG_03345","SJAG_02182","SJAG_02828","SJAG_03527","SJAG_04205","SJAG_01186","SJAG_00814","SJAG_00272","SJAG_03815","SJAG_04150","SJAG_02200","SJAG_04668","SJAG_00208","SJAG_04567","SJAG_04187","SJAG_02258","SJAG_03893","SJAG_00221","SJAG_01010","SJAG_02199","SJAG_04055","SJAG_01150","SJAG_00409","SJAG_05242","SJAG_01084","SJAG_03185","SJAG_05197","SJAG_00436","SJAG_00596","SJAG_01585","SJAG_04726","SJAG_02389","SJAG_04791","SJAG_00729","SJAG_03898","SJAG_00661","SJAG_02334","SJAG_00863","SJAG_04388","SJAG_02883","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[106116,80708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[94174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[121261,121262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[91286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[106803,111827,97470,117341,111828,117342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[118833,111674,103012,113543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[93664,97753,106328,118926,59336,108312,104591,96139,116306,118124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[101963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[92580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071502"},{"annotations":[110262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"},{"annotations":[110927,97019,78566,104625],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[74864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[118232,91035],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900039"},{"annotations":[79666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009314"},{"annotations":[111835,62839,81355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009651"},{"annotations":[71717,66865,114668,67812,98903,95434,60739,68952,107750,77353,65977,106026,70440,89778,97800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (not derived from living organisms) stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00221":null,"SJAG_00272":null,"SJAG_00409":null,"SJAG_00436":null,"SJAG_00596":null,"SJAG_00642":null,"SJAG_00661":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01084":null,"SJAG_01150":null,"SJAG_01186":null,"SJAG_01262":null,"SJAG_01584":null,"SJAG_01585":null,"SJAG_01648":null,"SJAG_02091":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02258":null,"SJAG_02334":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02389":null,"SJAG_02592":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03345":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03893":null,"SJAG_03898":null,"SJAG_04018":null,"SJAG_04055":null,"SJAG_04150":null,"SJAG_04187":null,"SJAG_04190":null,"SJAG_04205":null,"SJAG_04388":null,"SJAG_04567":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to abiotic stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"synonyms":[{"name":"response to abiotic stress","type":"narrow"}],"termid":"GO:0009628","terms_by_termid":{"GO:0009314":null,"GO:0009651":null,"GO:0009785":null,"GO:0031990":null,"GO:0034605":null,"GO:0050982":null,"GO:0070370":null,"GO:0070914":null,"GO:0071456":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071483":null,"GO:0071502":null,"GO:1900039":null,"GO:1904161":null}}


id: PBO:0060232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker like 2","termid":"PBO:0060232"}


id: GO:0016202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle tissue development","termid":"GO:0016202"}


id: PBO:0062831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odd-skipped related transcription factor 1","termid":"PBO:0062831"}


id: PBO:0117123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM29 antisense RNA 1","termid":"PBO:0117123"}


id: GO:0031413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates an organism's tendency or ability to rise or float in a fluid medium such as water or air, often through the use of stored gases.","definition_xrefs":["GOC:mah","PATO:0001420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of buoyancy","synonyms":[{"name":"buoyancy regulation","type":"exact"}],"termid":"GO:0031413"}


id: PBO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved gene with no initiator methionine","termid":"PBO:0002367"}


id: PBO:0051126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-4 (pseudogene)","termid":"PBO:0051126"}


id: GO:0044103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose + NADP+ = L-arabinono-1,4-lactone + NADPH + H+.","definition_xrefs":["PMID:16326697","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-arabinose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.376"],"termid":"GO:0044103"}


id: MONDO:0012196
data:
  {"annotated_genes":["SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87059],"is_not":false,"summary":null,"term":"MONDO:0012196"}]},"cv_name":"mondo","definition":"Any auditory neuropathy in which the cause of the disease is a mutation in the DIAPH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"},{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant auditory neuropathy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18127","MEDGEN:322984","OMIM:609129","MESH:C563790","UMLS:C1836743","DOID:0060690"],"synonyms":[{"name":"AUNA1","type":"exact"},{"name":"DIAPH3 auditory neuropathy","type":"exact"},{"name":"NSDAN","type":"exact"},{"name":"auditory neuropathy caused by mutation in DIAPH3","type":"exact"},{"name":"auditory neuropathy, autosomal dominant, 1","type":"related"},{"name":"auditory neuropathy, autosomal dominant, type 1","type":"exact"},{"name":"auditory neuropathy, nonsyndromic dominant","type":"related"},{"name":"autosomal dominant auditory neuropathy type 1","type":"exact"},{"name":"nonsyndromic dominant auditory neuropathy","type":"exact"}],"termid":"MONDO:0012196","terms_by_termid":{"MONDO:0012196":null},"xrefs":{"Monarch":{"xref_id":"0012196"}}}


id: GO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a processed miRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:21554756","PMID:15738428","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"miRNA transport","termid":"GO:1990428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"miRNA export from nucleus","termid":"GO:0061716"}


id: PATO:0000778
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000778 short term memory value (obsolete PATO:0000778)","termid":"PATO:0000778"}


id: PBO:0024847
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin binding by Cdc13 and Mcm4 is mutually exclusive","termid":"PBO:0024847"}


id: PBO:0071674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 6","termid":"PBO:0071674"}


id: PBO:0090633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap114","termid":"PBO:0090633"}


id: PBO:0046851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated via death domain","termid":"PBO:0046851"}


id: MONDO:0018547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute tricyclic antidepressant (TCA) poisoning is a potentially lethal intoxication that is characterized by life-threatening arrhythmias (sinus tachycardias, premature ventricular contractions, ventricular arrhythmias), anticholinergic toxidrome (mydriasis, dry mucous membrane, tachycardia, hypertension), central nervous system toxicity (lethargy, coma, myoclonic jerks), refractory hypotension, and sudden death.","definition_xrefs":["Orphanet:43117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute tricyclic antidepressant poisoning","secondary_identifiers":["UMLS:C5681319","MEDGEN:1830115"],"termid":"MONDO:0018547","xrefs":{"Monarch":{"xref_id":"0018547"}}}


id: PBO:0048472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCNA pseudogene 1","termid":"PBO:0048472"}


id: MONDO:0033181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenytoin or carbamazepine toxicity","secondary_identifiers":["Orphanet:414750"],"termid":"MONDO:0033181","xrefs":{"Monarch":{"xref_id":"0033181"}}}


id: PBO:0049065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 82","termid":"PBO:0049065"}


id: GO:0021668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 6. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 structural organization","synonyms":[{"name":"rhombomere 6 structural organisation","type":"exact"}],"termid":"GO:0021668"}


id: GO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of epinephrine from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine","termid":"GO:0003059"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by neuronal epinephrine-norepinephrine","termid":"GO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal epinephrine","synonyms":[{"name":"increased force of heart contraction by epinephrine released from the nerve endings","type":"exact"},{"name":"increased force of heart contraction by neuronal adrenaline","type":"related"},{"name":"increased force of heart contraction by neuronal epinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline","type":"related"},{"name":"positive regulation of heart contraction by neuronal epinephrine","type":"related"}],"termid":"GO:0003087"}


id: GO:0048622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of reproductive spores.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete reproductive sporulation (obsolete GO:0048622)","synonyms":[{"name":"reproductive sporulation","type":"exact"}],"termid":"GO:0048622"}


id: MONDO:0011692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal ganglia calcification, idiopathic, 2 (obsolete MONDO:0011692)","termid":"MONDO:0011692","xrefs":{"Monarch":{"xref_id":"0011692"}}}


id: GO:0004832
data:
  {"annotated_genes":["SJAG_00443","SJAG_02428"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71528,71756],"is_not":false,"summary":null,"term":"GO:0004832"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + ATP + tRNA(Val) = L-valyl-tRNA(Val) + AMP + diphosphate + 2 H+.","definition_xrefs":["RHEA:10704","EC:6.1.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00443":null,"SJAG_02428":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0140101","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"valine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:VALINE--TRNA-LIGASE-RXN","KEGG_REACTION:R03665","Reactome:R-HSA-380042","Reactome:R-HSA-380199"],"synonyms":[{"name":"L-valine:tRNAVal ligase (AMP-forming)","type":"related"},{"name":"valine transfer ribonucleate ligase activity","type":"related"},{"name":"valine translase activity","type":"related"},{"name":"valyl-tRNA synthetase activity","type":"exact"},{"name":"valyl-transfer RNA synthetase activity","type":"related"},{"name":"valyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"valyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004832","terms_by_termid":{"GO:0004832":null}}


id: PBO:0062529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily U member 9","termid":"PBO:0062529"}


id: GO:1905286
data:
  {"annotated_genes":["SJAG_03261","SJAG_02867","SJAG_03737","SJAG_01750","SJAG_02809","SJAG_03648"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81661,78517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042720"},{"annotations":[62586,75587,66849,69303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of serine-type peptidase activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:18640965","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01750":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serine-type peptidase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"Factor VII - TF complex","type":"narrow"}],"termid":"GO:1905286","terms_by_termid":{"GO:0005787":null,"GO:0042720":null}}


id: GO:0035789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of undifferentiated metanephric mesenchymal cells (precursors to metanephric mesangial cells) from the mesenchyme into the cleft of the developing glomerulus, during development of the metanephros.","definition_xrefs":["GOC:bf","GOC:yaf","GOC:mtg_kidney_jan10","PMID:19019919","PMID:10734101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in metanephros development","termid":"GO:0035788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchymal cell migration","synonyms":[{"name":"metanephric mesenchyme chemotaxis","type":"narrow"}],"termid":"GO:0035789"}


id: GO:0097269
data:
  {"annotated_genes":["SJAG_01865","SJAG_04568"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[121171,121172],"is_not":false,"summary":null,"term":"GO:0097269"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 isopentenyl diphosphate + (2E,6E)-farnesyl diphosphate = all-trans-decaprenyl diphosphate + 7 diphosphate.","definition_xrefs":["RHEA:27802","PMID:16262699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01865":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans-decaprenyl-diphosphate synthase activity","references_by_uniquename":{"PMID:29191091":null},"secondary_identifiers":["EC:2.5.1.91","Reactome:R-HSA-2162253"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate:isopentenyl-diphosphate farnesyltranstransferase activity","type":"exact"},{"name":"2-trans,6-trans-farnesyl diphosphate activity","type":"exact"},{"name":"decaprenyl pyrophosphate synthetase activity","type":"broad"},{"name":"decaprenyl-diphosphate synthase activity","type":"broad"},{"name":"polyprenylpyrophosphate synthetase activity","type":"broad"},{"name":"terpenoidallyltransferase activity","type":"broad"},{"name":"terpenyl pyrophosphate synthetase activity","type":"broad"},{"name":"trans-prenyltransferase activity","type":"broad"}],"termid":"GO:0097269","terms_by_termid":{"GO:0006743":null,"GO:0006744":null,"GO:0097269":null}}


id: MONDO:0009338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic veno-occlusive disease-immunodeficiency syndrome is characterized by the association of severe hypogammaglobulinemia, combined T and B cell immunodeficiency, absent lymph node germinal centers, absent tissue plasma cells and hepatic veno-occlusive disease.","definition_xrefs":["Orphanet:79124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hepatic veno-occlusive disease","termid":"MONDO:0019514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic veno-occlusive disease-immunodeficiency syndrome","secondary_identifiers":["MEDGEN:344659","NANDO:1200341","OMIM:235550","NANDO:2200714","SCTID:724361001","UMLS:C1856128","MESH:C537257","GARD:10083","DOID:0112254","icd11.foundation:712514250"],"synonyms":[{"name":"VODI","type":"related"},{"name":"VODI syndrome","type":"exact"},{"name":"familial veno-occlusive disease with immunodeficiency","type":"related"},{"name":"hepatic veno-occlusive disease with immunodeficiency","type":"related"},{"name":"hepatic venoocclusive disease with immunodeficiency","type":"related"},{"name":"veno-occlusive disease and immunodeficiency syndrome","type":"related"}],"termid":"MONDO:0009338","xrefs":{"Monarch":{"xref_id":"0009338"}}}


id: GO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"phenol metabolic process","termid":"GO:0072390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol catabolic process","termid":"GO:0072392"}


id: PBO:0090068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+]","termid":"PBO:0090068"}


id: GO:0035237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neuropeptide corazonin to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"corazonin receptor activity","termid":"GO:0035237"}


id: MONDO:0006487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoid cystic carcinoma that arises from the vagina. Myoepithelial cells are usually not present.","definition_xrefs":["NCIT:C40261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"vaginal adenocarcinoma","termid":"MONDO:0020653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal adenoid cystic carcinoma","secondary_identifiers":["UMLS:C1519912","MEDGEN:274376"],"synonyms":[{"name":"vaginal adenoid cystic cancer","type":"exact"},{"name":"vaginal adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0006487","xrefs":{"Monarch":{"xref_id":"0006487"}}}


id: MONDO:0021334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders characterized by abnormal proliferation of primary cells of the immune system or by excessive production of immunoglobulins.","definition_xrefs":["MESH:D007160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunoproliferative disorder","secondary_identifiers":["ICD9:203.80","SCTID:127071007","UMLS:C0021070","MEDGEN:7038"],"synonyms":[{"name":"Disorder, Immunoproliferative","type":"related"},{"name":"Disorders, Immunoproliferative","type":"related"},{"name":"Immunoproliferative Disorder","type":"related"},{"name":"Immunoproliferative Disorders","type":"related"},{"name":"Immunoproliferative disease","type":"related"},{"name":"Immunoproliferative disorder","type":"related"},{"name":"immunoproliferative disorder","type":"exact"}],"termid":"MONDO:0021334","xrefs":{"Monarch":{"xref_id":"0021334"}}}


id: PBO:0051295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-22 (pseudogene)","termid":"PBO:0051295"}


id: GO:0033491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving coniferin, 4-(3-hydroxyprop-1-en-1-yl)-2-methoxyphenyl beta-D-glucopyranoside.","definition_xrefs":["GOC:mah","MetaCyc:PWY-116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"coniferin metabolic process","synonyms":[{"name":"coniferin metabolism","type":"exact"}],"termid":"GO:0033491"}


id: GO:0014028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"},{"relation_name":"part_of","term_name":"notochord morphogenesis","termid":"GO:0048570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord formation","termid":"GO:0014028"}


id: PBO:0069457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 722, pseudogene","termid":"PBO:0069457"}


id: PBO:0028137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_wall_invagination_into_cytoplasm","termid":"PBO:0028137"}


id: PBO:0063830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD and ring finger domains 1","termid":"PBO:0063830"}


id: PBO:0078475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRHDE antisense RNA 1","termid":"PBO:0078475"}


id: GO:0102590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-rutinoside + 1-O-4-hydroxybenzoyl-beta-D-glucose = delphinidin 3-O-rutinoside-7-O-glucoside + 4-hydroxybenzoic acid + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-rutinoside 7-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102590)","termid":"GO:0102590"}


id: PBO:0042370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD180 molecule","termid":"PBO:0042370"}


id: GO:0035664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor where the TIRAP/MAL adaptor mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:11544529","GOC:BHF","PMID:12447442","PMID:11526399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TIRAP-dependent toll-like receptor signaling pathway","synonyms":[{"name":"MAL-dependent toll-like receptor signaling pathway","type":"exact"},{"name":"MyD88 adapter-like dependent toll-like receptor signaling pathway","type":"exact"},{"name":"TIRAP-dependent TLR signaling pathway","type":"exact"},{"name":"TIRAP-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0035664"}


id: GO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine pentaphosphate metabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolism","type":"exact"},{"name":"guanosine pentaphosphate metabolism","type":"exact"}],"termid":"GO:0015972"}


id: GO:1902521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an etoposide stimulus.","definition_xrefs":["GOC:TermGenie","GOC:dw","PMID:23648065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucoside","termid":"GO:1904631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to etoposide","termid":"GO:1902521"}


id: GO:0003110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of norepinephrine from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal norepinephrine","synonyms":[{"name":"increased force of heart contraction by neuronal noradrenaline","type":"related"},{"name":"increased force of heart contraction by neuronal norepinephrine","type":"exact"}],"termid":"GO:0003110"}


id: PBO:0062972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 4","termid":"PBO:0062972"}


id: GO:0031728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR3 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CCR3 chemokine receptor binding","synonyms":[{"name":"CCR3 chemokine receptor ligand","type":"narrow"},{"name":"eosinophil eotaxin receptor binding","type":"exact"}],"termid":"GO:0031728"}


id: PBO:0081263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 1","termid":"PBO:0081263"}


id: FYPO:0003417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule plus ends remain in contact with the cell cortex at cell tips for a longer time than normal.","definition_xrefs":["PomBase:mah","PMID:24530531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased microtubule dwell time at cell tip","synonyms":[{"name":"increased microtubule dwell time at cell end","type":"exact"},{"name":"increased microtubule dwell time at cell tip during mitotic cell cycle","type":"related"},{"name":"increased microtubule dwell time at cell tip during vegetative growth","type":"exact"},{"name":"increased microtubule plus end dwell time at cell tip","type":"exact"}],"termid":"FYPO:0003417"}


id: GO:1901897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:19708671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"}


id: FYPO:0006750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during nitrogen starvation","termid":"FYPO:0001096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal pre-tRNA level during nitrogen starvation","synonyms":[{"name":"normal pre-tRNA accumulation during nitrogen starvation","type":"related"},{"name":"normal pre-tRNA level during nitrogen depletion","type":"exact"},{"name":"normal pre-tRNA level during nitrogen deprivation","type":"exact"},{"name":"normal pre-tRNA transcript level during nitrogen starvation","type":"exact"},{"name":"normal tRNA level during nitrogen starvation","type":"broad"},{"name":"normal tRNA primary transcript level during nitrogen starvation","type":"exact"},{"name":"normal transfer RNA precursor level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006750"}


id: GO:0046661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the sex of a male organism by physical differentiation.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex differentiation","termid":"GO:0007548"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male sex differentiation","termid":"GO:0046661"}


id: FYPO:0000615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic S phase progression","termid":"FYPO:0000610"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic S phase","synonyms":[{"name":"decreased duration of S phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic S phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in S phase: increased rate","type":"related"},{"name":"reduced duration of mitotic S phase","type":"exact"}],"termid":"FYPO:0000615"}


id: PBO:0030913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_process_during_vegetative_growth","termid":"PBO:0030913"}


id: RO:HOM0000015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that is detected at the level of the 3D protein structure, but maybe not at the level of the amino acid sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_protein_structural_homology_relationship_with","synonyms":[{"name":"protein structural homologous to","type":"exact"}],"termid":"RO:HOM0000015"}


id: MONDO:0043071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aniridia","termid":"MONDO:0019172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Zazam Sheriff Phillips syndrome","secondary_identifiers":["MESH:C536723","MEDGEN:419768","UMLS:C2931300"],"synonyms":[{"name":"aniridia, ectopia lentis, abnormal upper incisors and intellectual disability","type":"related"},{"name":"aniridia, ectopia lentis, abnormal upper incisors and mental retardation","type":"related"},{"name":"aniridia, lens luxation, intellectual disability","type":"related"},{"name":"aniridia, lens luxation, mental retardation","type":"related"}],"termid":"MONDO:0043071","xrefs":{"Monarch":{"xref_id":"0043071"}}}


id: PBO:0068974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 218, pseudogene","termid":"PBO:0068974"}


id: PBO:0076704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCF4 antisense RNA 1","termid":"PBO:0076704"}


id: SO:0001712
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_trimethylation_site","synonyms":[{"name":"H3K79 tri-methylation site","type":"exact"},{"name":"H3K79Me3","type":"related"}],"termid":"SO:0001712"}


id: PBO:0062377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily C member 1","termid":"PBO:0062377"}


id: PBO:0030758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_miconazole","termid":"PBO:0030758"}


id: PBO:0051481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (VI)-22-1 (pseudogene)","termid":"PBO:0051481"}


id: PBO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3","termid":"PBO:0043326"}


id: PBO:0051641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1","termid":"PBO:0051641"}


id: PBO:0064401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase","termid":"PBO:0064401"}


id: MONDO:0957231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte/zygote/embryo maturation arrest 19","secondary_identifiers":["MEDGEN:1841078","OMIM:620333","UMLS:C5830442"],"termid":"MONDO:0957231","xrefs":{"Monarch":{"xref_id":"0957231"}}}


id: GO:0039638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a lipopolysaccharide (LPS) on the host cell surface.","definition_xrefs":["GOC:bf","PMID:12837775","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide-mediated virion attachment to host cell","synonyms":[{"name":"LPS binding involved in viral attachment to host cell","type":"exact"},{"name":"lipopolysaccharide binding involved in viral attachment to host cell","type":"exact"},{"name":"virion attachment, binding to host lipopolysaccharide","type":"exact"}],"termid":"GO:0039638"}


id: PR:Q9P7S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.09","synonyms":[{"name":"Spom972h-taf4","type":"exact"},{"name":"TBP-associated factor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7S4"}


id: PATO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture that is uniformly covered in short, oblong, or trench-like depressions.","definition_xrefs":["Book:Book"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrobiculate","termid":"PATO:0002294"}


id: PBO:0060078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 25","termid":"PBO:0060078"}


id: GO:1902833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation in dorsal spinal cord.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:21730158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in dorsal spinal cord","termid":"GO:0021921"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation in dorsal spinal cord","synonyms":[{"name":"activation of cell proliferation in dorsal spinal cord","type":"narrow"},{"name":"up regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"up-regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"upregulation of cell proliferation in dorsal spinal cord","type":"exact"}],"termid":"GO:1902833"}


id: MONDO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papilloma that arises from the vagina in infants and young women.","definition_xrefs":["NCIT:C40255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign vaginal neoplasm","termid":"MONDO:0000647"},{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"glandular papilloma","termid":"MONDO:0021078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal mullerian papilloma","secondary_identifiers":["DOID:133","UMLS:C1519926","MEDGEN:276952"],"synonyms":[{"name":"vaginal Muellerian papilloma","type":"exact"},{"name":"vaginal Mullerian papilloma","type":"exact"},{"name":"vaginal Müllerian papilloma","type":"exact"}],"termid":"MONDO:0001680","xrefs":{"Monarch":{"xref_id":"0001680"}}}


id: GO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by post-translational N-methylation of the pilin monomers.","definition_xrefs":["GOC:pamgo_curators","PMID:28496159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type IV pilus","synonyms":[{"name":"TFP","type":"exact"},{"name":"type 4 pilus","type":"exact"},{"name":"type IV fimbriae","type":"exact"}],"termid":"GO:0044096"}


id: GO:0072688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a SHREC complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"SHREC complex localization","synonyms":[{"name":"SHREC complex localisation","type":"exact"},{"name":"establishment and maintenance of SHREC complex localization","type":"exact"}],"termid":"GO:0072688"}


id: PBO:0091858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1","termid":"PBO:0091858"}


id: MONDO:0011538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontoocular syndrome","secondary_identifiers":["MEDGEN:344278","OMIM:605321","MESH:C565340","UMLS:C1854405"],"synonyms":[{"name":"frontoocular syndrome","type":"exact"}],"termid":"MONDO:0011538","xrefs":{"Monarch":{"xref_id":"0011538"}}}


id: MONDO:1012494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal T cell-negative, B cell-negative, NK cell-positive severe combined immunodeficiency disease with sensitivity to ionizing radiation, non-human animal","termid":"MONDO:1011732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal T cell-negative, B cell-negative, NK cell-positive severe combined immunodeficiency disease with sensitivity to ionizing radiation, pig","secondary_identifiers":["OMIA:001986-9823"],"termid":"MONDO:1012494","xrefs":{"Monarch":{"xref_id":"1012494"}}}


id: PBO:0082064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-ketoacyl-CoA thiolase with broad chain length specificity; cleaves 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA during beta-oxidation of fatty acids","termid":"PBO:0082064"}


id: MONDO:0020741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine-dependent epilepsy","termid":"MONDO:0009945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"pyridoxine-dependent epilepsy caused by ALDH7A1 mutant","secondary_identifiers":["DOID:0070519","OMIM:266100"],"synonyms":[{"name":"AASA dehydrogenase deficiency","type":"related"},{"name":"EPD","type":"related"},{"name":"Epd","type":"related"},{"name":"epilepsy, pyridoxine-dependent","type":"related"},{"name":"pyridoxine dependency with seizures","type":"related"},{"name":"pyridoxine-dependent epilepsy","type":"related"},{"name":"pyridoxine-dependent epilepsy caused by ALDH7A1 mutant","type":"exact"}],"termid":"MONDO:0020741","xrefs":{"Monarch":{"xref_id":"0020741"}}}


id: GO:0097095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the frontonasal suture, between frontal and nasal bones, is generated and organized.","definition_xrefs":["GOC:sl","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system","Wikipedia:Cranial_sutures","GOC:pr","PMID:12416537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"frontonasal suture morphogenesis","synonyms":[{"name":"nasofrontal suture morphogenesis","type":"exact"}],"termid":"GO:0097095"}


id: PBO:0030507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_capsazepine","termid":"PBO:0030507"}


id: GO:0071597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Crater-like ring of chitinous scar tissue located on the surface of the daughter cell, in budding fungi, at the site of separation from the mother cell. It is formed after the newly emerged daughter cell separates, thereby marking the site of cytokinesis and septation.","definition_xrefs":["PMID:16672383","PMID:7730409","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"cellular birth scar","termid":"GO:0071597"}


id: PBO:0086435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein, involved in vesicle formation; forms complex with Mst28p; member of DUP240 gene family; binds COPI and COPII vesicles; MST27 has a paralog, MST28, that arose from a segmental duplication","termid":"PBO:0086435"}


id: PBO:0074895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 70","termid":"PBO:0074895"}


id: PBO:0083588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YGR051C is not an essential gene","termid":"PBO:0083588"}


id: GO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by an eosinophil.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil mediated immunity","termid":"GO:0002447"}


id: GO:1904575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of selenocysteine insertion sequence binding.","definition_xrefs":["GOC:TermGenie","PMID:19716792","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of selenocysteine insertion sequence binding (obsolete GO:1904575)","synonyms":[{"name":"activation of SECIS binding","type":"narrow"},{"name":"activation of selenocysteine insertion sequence binding","type":"narrow"},{"name":"positive regulation of SECIS binding","type":"exact"},{"name":"up regulation of SECIS binding","type":"exact"},{"name":"up regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"up-regulation of SECIS binding","type":"exact"},{"name":"up-regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"upregulation of SECIS binding","type":"exact"},{"name":"upregulation of selenocysteine insertion sequence binding","type":"exact"}],"termid":"GO:1904575"}


id: FYPO:0007583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased during telophase of mitosis.","definition_xrefs":["PMID:19736319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm during mitotic telophase","synonyms":[{"name":"decreased protein localisation to cytoplasm during mitotic telophase","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0007583"}


id: GO:0071760
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgY isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgY immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgY immunoglobulin complex","termid":"GO:0071760"}


id: PBO:0011424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter subunit Mpc2","termid":"PBO:0011424"}


id: FYPO:0002721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration than normal of one or more enzymes that degrades cell wall polysaccharides by hydrolyzing alpha-glucan linkages.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to cell wall-degrading enzymes","termid":"FYPO:0001882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to alpha-glucanase","synonyms":[{"name":"resistance to alpha-glucanase during mitotic cell cycle","type":"related"},{"name":"resistance to alpha-glucanase during vegetative growth","type":"exact"},{"name":"resistant to alpha-glucanase","type":"exact"}],"termid":"FYPO:0002721"}


id: PBO:0030545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level","termid":"PBO:0030545"}


id: PBO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase superfamily member 1","termid":"PBO:0046329"}


id: GO:0048519
data:
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id: MONDO:0013389
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id: PATO:0000766
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id: GO:0015143
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id: GO:1990314
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id: GO:0120016
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id: PBO:0031165
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id: PBO:0046088
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id: PBO:0045752
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id: MONDO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A febrile illness characterized by chills, aches, vomiting, leukopenia, and sometimes encephalitis. It is caused by the colorado tick fever virus, a reovirus transmitted by the tick Dermacentor andersoni.","definition_xrefs":["MESH:D003121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Colorado tick fever","secondary_identifiers":["Orphanet:83595","icd11.foundation:951357413","DOID:4885","ICD9:066.1","ICD10CM:A93.2","NORD:989","SCTID:6452009","GARD:19042","MEDGEN:40398","MedDRA:10010022","UMLS:C0009400"],"synonyms":[{"name":"American mountain fever","type":"exact"},{"name":"Colorado tick encephalitis","type":"exact"},{"name":"Colorado tick fever virus caused disease or disorder","type":"exact"},{"name":"Colorado tick fever virus disease or disorder","type":"exact"},{"name":"Colorado tick fever virus infectious disease","type":"exact"},{"name":"Colorado tick-borne disease","type":"exact"},{"name":"Mountain fever","type":"exact"},{"name":"Mountain tick fever","type":"exact"},{"name":"Tick fever, American mountain","type":"exact"}],"termid":"MONDO:0005708","xrefs":{"Monarch":{"xref_id":"0005708"}}}


id: GO:0044664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cellular process of the reversion of cells to their original cell type, occurring as part of the process of phenotypic switching. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete reversion of cell type to default state involved in phenotypic switching (obsolete GO:0044664)","termid":"GO:0044664"}


id: FYPO:0006829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to zinc ion starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"normal RNA level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to zinc starvation","type":"exact"},{"name":"normal RNA level during zinc ion starvation","type":"exact"},{"name":"normal RNA level in response to zinc ion starvation","type":"exact"},{"name":"normal mRNA level during cellular response to zinc ion starvation","type":"narrow"},{"name":"normal transcript level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0006829"}


id: GO:0016251
data:
  {"annotated_genes":["SJAG_00958","SJAG_00095","SJAG_01523","SJAG_04368","SJAG_01475","SJAG_02174","SJAG_03618","SJAG_00901","SJAG_00584","SJAG_01808","SJAG_04917","SJAG_03206","SJAG_00150","SJAG_03107","SJAG_04614","SJAG_03095","SJAG_04852","SJAG_04654","SJAG_00650","SJAG_01710","SJAG_00421","SJAG_01207","SJAG_00872","SJAG_04977","SJAG_00512","SJAG_00741","SJAG_02541","SJAG_00995","SJAG_03752","SJAG_03900","SJAG_03285","SJAG_00159","SJAG_00735","SJAG_00758","SJAG_04274","SJAG_02458","SJAG_00116"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72169,73021,73729,75332,76125,76643,77258,78399,78528,78958,80897,82035,82089,90264,91058,91664,92035,93952,95285,95921,99398,102014,104092,104955,105412,107272,107862,109490,110300,110802,113919,114807,116072,116636,116912,116982,119415],"is_not":false,"summary":null,"term":"GO:0016251"}]},"cv_name":"molecular_function","definition":"A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase II. The general transcription factors for RNA polymerase II include TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBP). In most species, RNA polymerase II transcribes all messenger RNAs (mRNAs), most untranslated regulatory RNAs, the majority of the snoRNAs, four of the five snRNAs (U1, U2, U4, and U5), and other small noncoding RNAs. For some small RNAs there is variability between species as to whether it is transcribed by RNA polymerase II or RNA polymerase III. However there are also rare exceptions, such as Trypanosoma brucei, where RNA polymerase I transcribes certain mRNAs in addition to its normal role in rRNA transcription.","definition_xrefs":["PMID:23442138","PMID:25693126","GOC:txnOH-2018","PMID:10384286","PMID:10747032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor activity","termid":"GO:0140223"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00116":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00421":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00650":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00958":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01710":null,"SJAG_01808":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03618":null,"SJAG_03752":null,"SJAG_03900":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04614":null,"SJAG_04654":null,"SJAG_04852":null,"SJAG_04917":null,"SJAG_04977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140223"}],"interesting_parent_ids":["GO:0003674","GO:0140223"],"is_obsolete":false,"name":"RNA polymerase II general transcription initiation factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000983","GO:0001075","GO:0003703"],"synonyms":[{"name":"GTF2 activity","type":"exact"},{"name":"RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity","type":"related"},{"name":"RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly","type":"related"},{"name":"basal RNA polymerase II transcription factor activity","type":"exact"},{"name":"general RNA polymerase II transcription factor activity","type":"exact"},{"name":"sequence-specific core promoter binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly","type":"related"},{"name":"transcription factor activity, RNA polymerase II core promoter sequence-specific DNA binding","type":"related"},{"name":"transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly","type":"related"}],"termid":"GO:0016251","terms_by_termid":{"GO:0016251":null}}


id: GO:1900560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of austinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"austinol metabolic process","termid":"GO:1900558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol biosynthetic process","synonyms":[{"name":"austinol anabolism","type":"exact"},{"name":"austinol biosynthesis","type":"exact"},{"name":"austinol formation","type":"exact"},{"name":"austinol synthesis","type":"exact"}],"termid":"GO:1900560"}


id: MONDO:1012872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary ciliary dyskinesia that occurs in sheep due to a mutation in the CCDC65 gene. Homozygous affected lambs suffer from respiratory defects predisposing infectious pneumonia with a fatal ending at a young age.","definition_xrefs":["PMID:35052387","MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia, non-human animal","termid":"MONDO:1011925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia, CCDC65-related, sheep","secondary_identifiers":["OMIA:002342-9940"],"synonyms":[{"name":"LDHH6","type":"exact"},{"name":"Lacaune deficient homozygous haplotype 6, sheep","type":"related"}],"termid":"MONDO:1012872","xrefs":{"Monarch":{"xref_id":"1012872"}}}


id: GO:1904074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24508636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of trophectodermal cell proliferation","termid":"GO:1904073"},{"relation_name":"negatively_regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trophectodermal cell proliferation","synonyms":[{"name":"down regulation of trophectoderm cell proliferation","type":"exact"},{"name":"down regulation of trophectodermal cell proliferation","type":"exact"},{"name":"down-regulation of trophectoderm cell proliferation","type":"exact"},{"name":"down-regulation of trophectodermal cell proliferation","type":"exact"},{"name":"downregulation of trophectoderm cell proliferation","type":"exact"},{"name":"downregulation of trophectodermal cell proliferation","type":"exact"},{"name":"inhibition of trophectoderm cell proliferation","type":"narrow"},{"name":"inhibition of trophectodermal cell proliferation","type":"narrow"},{"name":"negative regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904074"}


id: FYPO:0000424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis begins later than normal. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of endocytosis during vegetative growth","synonyms":[{"name":"delayed endocytosis during vegetative growth","type":"exact"},{"name":"delayed onset of actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"delayed onset of endocytosis during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: delayed during vegetative growth","type":"related"}],"termid":"FYPO:0000424"}


id: GO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via macropinocytosis.","definition_xrefs":["PMID:16556257","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following macropinocytosis","termid":"GO:0002750"}


id: GO:0046402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the O side chain of a lipopolysaccharide, which determines the antigenic specificity of the organism. It is made up of about 50 repeating units of a branched tetrasaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"O antigen metabolic process","synonyms":[{"name":"O antigen metabolism","type":"exact"}],"termid":"GO:0046402"}


id: PBO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Arp42","termid":"PBO:0002483"}


id: GO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene + 1/2 O2 = 3-hydroxytoluene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene 3-monooxygenase activity (obsolete GO:0018657)","termid":"GO:0018657"}


id: MONDO:0013211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in mutation in the TNNI3 gene on chromosome 19q13.42.","definition_xrefs":["PMID:19590045","DOID:0110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1FF","secondary_identifiers":["MEDGEN:412876","OMIM:613286","UMLS:C2750091","GARD:15643","MESH:C567654"],"synonyms":[{"name":"CMD1FF","type":"exact"},{"name":"cardiomyopathy, dilated, 1FF","type":"related"},{"name":"cardiomyopathy, dilated, type 1Ff","type":"exact"},{"name":"dilated cardiomyopathy type 1FF","type":"exact"}],"termid":"MONDO:0013211","xrefs":{"Monarch":{"xref_id":"0013211"}}}


id: GO:0140723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of patulin, an acetate-derived tetraketide mycotoxin produced by several fungal species that shows antimicrobial properties against several bacteria.","definition_xrefs":["PMID:25120234","PMID:30680886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"patulin biosynthetic process","synonyms":[{"name":"patulin anabolism","type":"exact"},{"name":"patulin biosynthesis","type":"exact"},{"name":"patulin formation","type":"exact"},{"name":"patulin synthesis","type":"exact"}],"termid":"GO:0140723"}


id: PBO:0011087
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae URA1","termid":"PBO:0011087"}


id: PBO:0038777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 1B","termid":"PBO:0038777"}


id: PBO:0071752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0","termid":"PBO:0071752"}


id: PBO:0077554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 260","termid":"PBO:0077554"}


id: PBO:0057954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3677 and MIR940 host gene","termid":"PBO:0057954"}


id: PBO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 16","termid":"PBO:0070760"}


id: GO:0034406
data:
  {"annotated_genes":["SJAG_01835","SJAG_04483","SJAG_04771","SJAG_01290","SJAG_01453","SJAG_03646","SJAG_02192","SJAG_01255","SJAG_00610","SJAG_03705","SJAG_02222","SJAG_05001","SJAG_04668","SJAG_00876","SJAG_04659","SJAG_00218","SJAG_01171","SJAG_04462","SJAG_04666","SJAG_03587","SJAG_01288","SJAG_05285","SJAG_03123","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[74681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[76200,74684,72740,107912,115001,77546,93372,117660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104439,79915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[109883,103738,103739,96884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[94193,89279],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[94177,107721,92540,107148,69342,119757,119890],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01255":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"cell wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034406","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0034818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark Lnp1","termid":"PBO:0034818"}


id: SO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized from RNA by reverse transcriptase, single stranded.","direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA","termid":"SO:0000756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_cDNA","synonyms":[{"name":"single strand cDNA","type":"exact"},{"name":"single stranded cDNA","type":"exact"},{"name":"single-strand cDNA","type":"related"}],"termid":"SO:0000757"}


id: FYPO:0005506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mitochondrial transport mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mitochondrial transport mRNAs are transcribed from genes whose products are involved in transport to or from the mitochondrion.","definition_xrefs":["PomBase:mah","PMID:23236291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of mitochondrial transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of mitochondrial transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mitochondrial transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased mitochondrial transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0005506"}


id: PR:O13987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and IPT/TIG repeat-containing protein C26H5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.05","synonyms":[{"name":"Spom972h-mga2","type":"exact"}],"termid":"PR:O13987"}


id: PBO:0078155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 33 (pseudogene)","termid":"PBO:0078155"}


id: MONDO:0025095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any of a group of infections of fowl caused by protozoa of the genera plasmodium, Leucocytozoon, and Haemoproteus. The life cycles of these parasites and the disease produced bears strong resemblance to those observed in human malaria.","definition_xrefs":["MESH:D008289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"protozoan infections, animal","termid":"MONDO:0025114"},{"relation_name":"is_a","term_name":"vector-borne disease, non-human animal","termid":"MONDO:0700114"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malaria, avian","synonyms":[{"name":"Avian Malarias","type":"related"},{"name":"Avian malaria","type":"related"},{"name":"Malarias, Avian","type":"related"}],"termid":"MONDO:0025095","xrefs":{"Monarch":{"xref_id":"0025095"}}}


id: PBO:0056469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST4 intronic transcript 1","termid":"PBO:0056469"}


id: GO:2001280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of unsaturated fatty acid biosynthetic process.","definition_xrefs":["GO:0006636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"regulation of unsaturated fatty acid biosynthetic process","termid":"GO:2001279"},{"relation_name":"positively_regulates","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of unsaturated fatty acid biosynthetic process","synonyms":[{"name":"positive regulation of fatty acid desaturation","type":"related"},{"name":"positive regulation of polyunsaturated fatty acid biosynthesis","type":"related"},{"name":"positive regulation of unsaturated fatty acid anabolism","type":"exact"},{"name":"positive regulation of unsaturated fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of unsaturated fatty acid formation","type":"exact"},{"name":"positive regulation of unsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:2001280"}


id: CHEBI:15741
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinic acid","termid":"CHEBI:15741"}


id: PBO:0030645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_pH","termid":"PBO:0030645"}


id: MONDO:0013121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary congenital glaucoma","termid":"MONDO:0000365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary congenital, C","secondary_identifiers":["GARD:18225","MEDGEN:854718","OMIM:613085","UMLS:C3888011"],"synonyms":[{"name":"GLC3C","type":"exact"},{"name":"glaucoma 3, primary congenital, C","type":"exact"}],"termid":"MONDO:0013121","xrefs":{"Monarch":{"xref_id":"0013121"}}}


id: PBO:0114520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WD repeat subunit Swd1","termid":"PBO:0114520"}


id: GO:1901560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a purvalanol A stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to purvalanol A","termid":"GO:1901560"}


id: PBO:0004574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter (predicted)","termid":"PBO:0004574"}


id: PBO:0085627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in export of proteins from the endoplasmic reticulum; ERV15 has a paralog, ERV14, that arose from the whole genome duplication","termid":"PBO:0085627"}


id: MOD:00725
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group linked through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"complex glycosylation","termid":"MOD:00725"}


id: PBO:0086833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to helicases; located in the telomere region on the right arm of chromosome VIII","termid":"PBO:0086833"}


id: PBO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 26","termid":"PBO:0060038"}


id: PBO:0031846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0031846"}


id: PBO:0027762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027762"}


id: MONDO:0044740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma arising from the salivary glands. The majority of patients are in their sixth through eight decades. It usually presents as a rapidly enlarging mass, which may be painful. It usually has an aggressive clinical course.","definition_xrefs":["NCIT:C7991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"},{"relation_name":"is_a","term_name":"malignant epithelial tumor of salivary glands","termid":"MONDO:0017167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"salivary gland squamous cell carcinoma","secondary_identifiers":["EFO:1001967","Orphanet:500481","UMLS:C0279697","MEDGEN:83545","GARD:17929"],"synonyms":[{"name":"SCC of salivary gland","type":"exact"},{"name":"SCC of the salivary gland","type":"exact"},{"name":"epidermoid carcinoma of salivary gland","type":"exact"},{"name":"epidermoid carcinoma of the salivary gland","type":"exact"},{"name":"saliva-secreting gland squamous cell carcinoma","type":"exact"},{"name":"salivary gland SCC","type":"exact"},{"name":"salivary gland epidermoid carcinoma","type":"exact"},{"name":"salivary gland squamous cell cancer","type":"exact"},{"name":"salivary gland squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of salivary gland","type":"exact"},{"name":"squamous cell carcinoma of salivary glands","type":"related"},{"name":"squamous cell carcinoma of the salivary gland","type":"exact"}],"termid":"MONDO:0044740","xrefs":{"Monarch":{"xref_id":"0044740"}}}


id: GO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant) and the tumor suppressor protein adenomatous polyposis coli (APC); may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Scrib-APC complex","synonyms":[{"name":"hScrib-APC complex","type":"narrow"}],"termid":"GO:0034749"}


id: MONDO:0017474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of fingers","secondary_identifiers":["GARD:8529","MESH:C537720","Orphanet:295044","HP:0100746","UMLS:C0574044","icd11.foundation:1647254435","MEDGEN:107892","SCTID:297195000"],"synonyms":[{"name":"Megalodactyly of the hand","type":"related"},{"name":"macrodactyly of hand","type":"exact"},{"name":"macrodactyly of the hand","type":"related"},{"name":"megalodactylism of the hand","type":"related"}],"termid":"MONDO:0017474","xrefs":{"Monarch":{"xref_id":"0017474"}}}


id: PBO:0076634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 Y-linked pseudogene 1","termid":"PBO:0076634"}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: FYPO:0000245
data:
  {"alleles_by_uniquename":{"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121103,121305],"is_not":false,"summary":null,"term":"FYPO:0000245"},{"annotations":[120976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_02527":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"erg1delta":{"display_name":"erg1delta","display_uniquename":"erg1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00370:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability in stationary phase","references_by_uniquename":{"PMID:27678009":null,"PMID:37233261":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_00370","SJAG_02527","SJAG_04312"],"single_locus_genotype_uniquenames":["erg1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pka1delta"],"synonyms":[{"name":"decreased chronological lifespan","type":"related"},{"name":"decreased longevity","type":"exact"},{"name":"decreased viability in stationary phase","type":"exact"},{"name":"growth defect, required for stationary phase","type":"related"},{"name":"increased chronological cell aging","type":"related"},{"name":"loss of cell population viability in stationary phase","type":"exact"},{"name":"reduced viability in stationary phase","type":"exact"}],"termid":"FYPO:0000245","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000245":null,"FYPO:0005231":null}}


id: MONDO:0008909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorder of glycosylation, type i/IIx","secondary_identifiers":["OMIM:212067","MESH:C562844","MEDGEN:91162","UMLS:C0349655"],"synonyms":[{"name":"CDG X","type":"related"},{"name":"CDG-X","type":"related"},{"name":"congenital disorder of glycosylation type I/IIX","type":"related"},{"name":"congenital disorder of glycosylation, type i/IIx","type":"exact"}],"termid":"MONDO:0008909","xrefs":{"Monarch":{"xref_id":"0008909"}}}


id: MOD:00380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["PubMed:12910261","PubMed:14725769","RESID:AA0375","Unimod:424#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-aspartyl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"},{"name":"nitrate reductase A aspartyl Mo-bisMGD cofactor","type":"exact"},{"name":"phosphoric acid 4-(2-amino-4-oxo-3,4,5,6,-tetrahydro-pteridin-6-yl)-2-hydroxy-3,4-dimercapto-but-3-en-yl ester guanylate ester","type":"exact"}],"termid":"MOD:00380"}


id: MONDO:0009950
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87335],"is_not":false,"summary":null,"term":"MONDO:0009950"}]},"cv_name":"mondo","definition":"A rare, genetic metabolic disorder due to pyruvate kinase deficiency characterized by a variable degree of chronic nonspherocytic hemolytic anemia resulting in a variable clinical manifestations ranging from fatal anemia at birth to a to a fully compensated hemolysis without apparent anemia.","definition_xrefs":["Orphanet:766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0005570","MONDO:0019254","MONDO:0037792"],"is_obsolete":false,"name":"pyruvate kinase deficiency of red cells","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:473069","NANDO:2200628","SCTID:124331002","OMIM:266200","UMLS:C0340968","MESH:C564858","NORD:1642","GARD:7514","NCIT:C99037","DOID:0111077"],"synonyms":[{"name":"PK deficiency","type":"exact"},{"name":"Pyruvate Kinase Deficiency","type":"exact"},{"name":"anemia, congenital, nonspherocytic hemolytic, 2, pyruvate kinase deficient","type":"exact"},{"name":"hemolytic anaemia due to pyruvate Kinase deficiency","type":"exact"},{"name":"hemolytic anaemia due to red cell pyruvate kinase deficiency","type":"exact"},{"name":"hemolytic anemia due to pyruvate Kinase deficiency","type":"exact"},{"name":"hemolytic anemia due to red cell pyruvate kinase deficiency","type":"exact"},{"name":"pyruvate kinase deficiency","type":"exact"},{"name":"pyruvate kinase deficiency of erythrocyte","type":"exact"},{"name":"pyruvate kinase deficiency of erythrocytes","type":"exact"},{"name":"pyruvate kinase deficiency of red cells","type":"exact"}],"termid":"MONDO:0009950","terms_by_termid":{"MONDO:0009950":null},"xrefs":{"Monarch":{"xref_id":"0009950"}}}


id: GO:0060963
data:
  {"annotated_genes":["SJAG_02723","SJAG_02671","SJAG_01243","SJAG_03241"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89726,91236,95265,108470],"is_not":false,"summary":null,"term":"GO:0060963"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0060962"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01243":null,"SJAG_02671":null,"SJAG_02723":null,"SJAG_03241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"positive regulation of ribosomal protein gene transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060963","terms_by_termid":{"GO:0060963":null}}


