# terms

id: PBO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim14 (predicted)","termid":"PBO:0001125"}


id: PBO:0075507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPC25 component of NDC80 kinetochore complex","termid":"PBO:0075507"}


id: PBO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 2","termid":"PBO:0047370"}


id: GO:0055059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a neuroblast into two daughter cells with different developmental potentials.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric neuroblast division","termid":"GO:0055059"}


id: GO:0034390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a smooth muscle cell. Smooth muscle consists of non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl","CL:0000192","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell apoptotic process","synonyms":[{"name":"SMC apoptosis","type":"exact"},{"name":"apoptosis of smooth muscle cells","type":"exact"},{"name":"programmed cell death of smooth muscle cells by apoptosis","type":"exact"},{"name":"programmed cell death, smooth muscle cells","type":"exact"},{"name":"smooth muscle cell apoptosis","type":"narrow"},{"name":"smooth muscle cell programmed cell death by apoptosis","type":"exact"}],"termid":"GO:0034390"}


id: PBO:0088625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate aminotransferase Maa1","termid":"PBO:0088625"}


id: PBO:0081731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 662","termid":"PBO:0081731"}


id: GO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that positively regulates gene expression by demethylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide and are often associated with the transcription start site of genes.","definition_xrefs":["Wikipedia:Cpg_island","PMID:36150101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gene expression via chromosomal CpG island demethylation","synonyms":[{"name":"DNA demethylation","type":"broad"},{"name":"DNA hypomethylation of CpG island","type":"exact"},{"name":"hypomethylation of CpG island","type":"exact"},{"name":"positive regulation of gene expression via chromosomal CpG dinucleotide demethylation","type":"exact"}],"termid":"GO:0044029"}


id: FYPO:0005603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint","termid":"FYPO:0002341"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"delayed mitotic DNA damage checkpoint deactivation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"prolonged mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005603"}


id: GO:0009118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleoside metabolic process","synonyms":[{"name":"regulation of nucleoside metabolism","type":"exact"}],"termid":"GO:0009118"}


id: GO:0003199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of a cardiac valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"heart valve formation","termid":"GO:0003188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in heart valve formation","synonyms":[{"name":"endocardial cushion to mesenchymal transition involved in valve formation","type":"exact"}],"termid":"GO:0003199"}


id: FYPO:0003286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"decreased mitotic chromosome condensation","synonyms":[{"name":"decreased chromosome condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"reduced mitotic chromosome condensation","type":"exact"}],"termid":"FYPO:0003286"}


id: PR:O94461
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase C1687.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.21","synonyms":[{"name":"Spom972h-SPAC1687.21","type":"exact"}],"termid":"PR:O94461"}


id: PBO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin like 1","termid":"PBO:0042931"}


id: PBO:0025446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-P ortholog Fta2","termid":"PBO:0025446"}


id: PBO:0003772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-binding protein 4 (predicted)","termid":"PBO:0003772"}


id: GO:0140357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"heme transmembrane transport","termid":"GO:0035351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"heme export from vacuole to cytoplasm","termid":"GO:0140357"}


id: PBO:0065426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta 11","termid":"PBO:0065426"}


id: PBO:0074891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 66","termid":"PBO:0074891"}


id: PBO:0086770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; small ORF identified by SAGE; deletion strains are moderately sensitive to the radiomimetic drug bleomycin","termid":"PBO:0086770"}


id: PBO:0053802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1058","termid":"PBO:0053802"}


id: PBO:0065849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 1","termid":"PBO:0065849"}


id: PBO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, poly(A)-bearing RNA (predicted)","termid":"PBO:0000102"}


id: GO:0072304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900211"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072304"}


id: GO:0160176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of magnesium ion from cytosol to endoplasmic reticulum.","definition_xrefs":["PMID:38513662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"magnesium ion transmembrane transport","termid":"GO:1903830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"magnesium ion transport from cytosol to endoplasmic reticulum","termid":"GO:0160176"}


id: PBO:0091387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glomulin, ubiquitin-protein transferase inhibitor Glm1","termid":"PBO:0091387"}


id: GO:0102328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + a 3-oxoacid = carbon dioxide + a methylketone.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxoacid decarboxylase activity (obsolete GO:0102328)","termid":"GO:0102328"}


id: GO:0060653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland cord. Epithelial cells of the mammary cord give it its funnel-like shape and some are cornified.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland cord morphogenesis","synonyms":[{"name":"epithelial cell differentiation involved in mammary gland sprout morphogenesis","type":"related"}],"termid":"GO:0060653"}


id: PBO:0077023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 5","termid":"PBO:0077023"}


id: PBO:0116304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bZIP transcriptional activator of amino acid biosynthetic genes; activator responds to amino acid starvation; expression is tightly regulated at both the transcriptional and translational levels; contains four upstream open reading frames (uORFs) in 5' untranslated region which regulate translation; participates in sulfur starvation-induced autophagy along with Met4p, but is dispensable","termid":"PBO:0116304"}


id: PBO:0078506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tribbles pseudokinase 3","termid":"PBO:0078506"}


id: GO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of lysine, carried by a specialized lysine-accepting tRNA (possessing a CUA anticodon), to pyrrolysine (a lysine with an amide linkage to a (4R,5R)-4-substituted pyrroline-5-carboxylate).","definition_xrefs":["PMID:12121639","PMID:12029131","PMID:12029132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"conversion of lysyl-tRNA to pyrrolysyl-tRNA","termid":"GO:0001720"}


id: PBO:0042114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 186","termid":"PBO:0042114"}


id: PATO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000113 radiation sensitivity (obsolete PATO:0000113)","termid":"PATO:0000113"}


id: PBO:0047226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 228 member B","termid":"PBO:0047226"}


id: FYPO:0002262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated cell","type":"exact"}],"termid":"FYPO:0002262"}


id: PBO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) subunit 1 Idh1","termid":"PBO:0002310"}


id: MONDO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 12","termid":"MONDO:0042968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy/tetrasomy of the short arm of chromosome 12","secondary_identifiers":["GARD:20853","UMLS:C5679724","MEDGEN:1826045","Orphanet:262658"],"synonyms":[{"name":"partial duplication/triplication of chromosome 12p","type":"exact"},{"name":"partial duplication/triplication of the short arm of chromosome 12","type":"exact"},{"name":"partial trisomy/tetrasomy of chromosome 12p","type":"exact"},{"name":"partial trisomy/tetrasomy of the short arm of chromosome type 12","type":"exact"}],"termid":"MONDO:0016933","xrefs":{"Monarch":{"xref_id":"0016933"}}}


id: GO:0006616
data:
  {"annotated_genes":["SJAG_03684","SJAG_00064","SJAG_04129","SJAG_02208","SJAG_02330","SJAG_00959"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74899,75308,77239,99833,104381,110130],"is_not":false,"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process during cotranslational membrane targeting wherein proteins move across a membrane. SRP and its receptor initiate the transfer of the nascent chain across the endoplasmic reticulum (ER) membrane; they then dissociate from the chain, which is transferred to a set of transmembrane proteins, collectively called the translocon. Once the nascent chain translocon complex is assembled, the elongating chain passes directly from the large ribosomal subunit into the centers of the translocon, a protein-lined channel within the membrane. The growing chain is never exposed to the cytosol and does not fold until it reaches the ER lumen.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transmembrane transport","termid":"GO:0065002"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03684":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006605","GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER translocation","type":"broad"},{"name":"SRP-dependent cotranslational membrane targeting, translocation","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, translocation","type":"exact"},{"name":"translocation during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006616","terms_by_termid":{"GO:0006616":null}}


id: FYPO:0005953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic G2 DNA damage checkpoint is greater than in wild type during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint during cellular response to ionizing radiation","termid":"FYPO:0003490"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"delayed mitotic G2 DNA damage checkpoint deactivation during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"},{"name":"prolonged mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005953"}


id: PBO:0074545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi, nidogen and EGF like domains 1","termid":"PBO:0074545"}


id: MONDO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammation of the mucous membrane lining the nose, usually associated with nasal discharge.","definition_xrefs":["NCIT:C34986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity disorder","termid":"MONDO:0002232"},{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhinitis","secondary_identifiers":["MESH:D012220","DOID:4483","SCTID:70076002","UMLS:C0035455","MEDGEN:19782","ICD10CM:J30","EFO:0008521"],"synonyms":[{"name":"inflammation of nasal cavity mucosa","type":"exact"},{"name":"nasal cavity mucosa inflammation","type":"exact"},{"name":"runny nose","type":"related"}],"termid":"MONDO:0003014","xrefs":{"Monarch":{"xref_id":"0003014"}}}


id: PBO:0063160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 6","termid":"PBO:0063160"}


id: PBO:0060042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 30","termid":"PBO:0060042"}


id: GO:0018344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a geranylgeranyl group to a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenylation","termid":"GO:0018342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein geranylgeranylation","secondary_identifiers":["GO:0018348"],"synonyms":[{"name":"C-terminal protein geranylgeranylation","type":"narrow"},{"name":"protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:0018344"}


id: GO:0034643
data:
  {"annotated_genes":["SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104562],"is_not":false,"summary":null,"term":"GO:0034643"}]},"cv_name":"biological_process","definition":"The directed movement of the mitochondrion to a specific location, by a process involving microtubules.","definition_xrefs":["PMID:16306220","PMID:12972644","PMID:15979253","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of mitochondrion localization, microtubule-mediated","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of mitochondrion localisation, microtubule-mediated","type":"exact"},{"name":"microtubule-mediated mitochondrion localization","type":"exact"},{"name":"mitochondrial localization, microtubule-mediated","type":"exact"}],"termid":"GO:0034643","terms_by_termid":{"GO:0034643":null}}


id: GO:0099083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of synaptic transmission by cell-cell signaling across the synaptic cleft from postsynapse to presynapse, mediated by a neuropeptide.","definition_xrefs":["GOC:PARL","PMID:19448629","GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099083"}


id: GO:0000812
data:
  {"annotated_genes":["SJAG_04097","SJAG_02385","SJAG_03036","SJAG_03694","SJAG_04355","SJAG_05192","SJAG_02990","SJAG_03145","SJAG_01465","SJAG_04596","SJAG_02571","SJAG_05282","SJAG_02798","SJAG_03579","SJAG_02500","SJAG_02466"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71771,74604,75352,77972,78640,81717,94144,98429,100016,100745,109692,110882,114983,115154,116553,119297],"is_not":false,"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits.","definition_xrefs":["PMID:14645854","GOC:rb","PMID:14690608","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"is_a","term_name":"INO80-type complex","termid":"GO:0097346"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02385":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02571":null,"SJAG_02798":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"Swr1 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SWR-C","type":"exact"}],"termid":"GO:0000812","terms_by_termid":{"GO:0000812":null}}


id: PBO:0054859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2273","termid":"PBO:0054859"}


id: MONDO:0043361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A compression of ILIAC VEIN that results in a decreased flow in the vein and in the left LOWER EXTREMITY due to a vascular malformation. It may result in left leg EDEMA, pain, iliofemoral DEEP VENOUS THROMBOSIS and POSTTHROMBOTIC SYNDROME. Compression of the left common ILIAC VEIN by the right common ILIAC ARTERY against the underlying fifth LUMBAR VERTEBRA is the typical underlying malformation.","definition_xrefs":["MESH:D062108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"May-Thurner syndrome","secondary_identifiers":["Orphanet:675404","SCTID:448804008","MEDGEN:473753","UMLS:C3165062"],"synonyms":[{"name":"Cockett syndrome","type":"related"},{"name":"Iliac vein compression syndrome","type":"related"},{"name":"Iliocaval compression syndrome","type":"related"},{"name":"Iliocaval compression syndromes","type":"related"},{"name":"May Thurner syndrome","type":"related"},{"name":"May-Thurner syndrome","type":"exact"},{"name":"compression syndrome, Iliocaval","type":"related"},{"name":"compression syndromes, Iliocaval","type":"related"},{"name":"iliac vein compression syndrome","type":"exact"},{"name":"syndrome, Cockett","type":"related"},{"name":"syndrome, Iliocaval compression","type":"related"},{"name":"syndrome, May-Thurner","type":"related"},{"name":"syndromes, Iliocaval compression","type":"related"}],"termid":"MONDO:0043361","xrefs":{"Monarch":{"xref_id":"0043361"}}}


id: PBO:0076387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator of cytochrome c oxidase I","termid":"PBO:0076387"}


id: PBO:0061929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 4","termid":"PBO:0061929"}


id: MONDO:1010555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in snow leopard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, snow leopard","secondary_identifiers":["OMIA:000933-29064"],"termid":"MONDO:1010555","xrefs":{"Monarch":{"xref_id":"1010555"}}}


id: PBO:0046662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"espin pseudogene","termid":"PBO:0046662"}


id: PBO:0001437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof14","termid":"PBO:0001437"}


id: PBO:0066560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling like 1","termid":"PBO:0066560"}


id: PBO:0069820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1106, pseudogene","termid":"PBO:0069820"}


id: _global:regulates_o_has_input
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the has_input relation","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_input","secondary_identifiers":["GOREL:0001030"],"termid":"_global:regulates_o_has_input"}


id: GO:0099117
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105543],"is_not":false,"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"The movement of a protein along a microtubule to the cell-tip, mediated by motor proteins.","definition_xrefs":["PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein transport along microtubule to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099117","terms_by_termid":{"GO:0099117":null}}


id: PBO:0076399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAF1A antisense RNA 1","termid":"PBO:0076399"}


id: PBO:0061861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte transcription factor 2","termid":"PBO:0061861"}


id: GO:0046799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The recruitment of the helicase-primase complex to viral DNA lesions during viral DNA repair.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete recruitment of helicase-primase complex to DNA lesions (obsolete GO:0046799)","termid":"GO:0046799"}


id: PBO:0087526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle; phosphorylated","termid":"PBO:0087526"}


id: GO:0140568
data:
  {"annotated_genes":["SJAG_01435","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140569"},{"annotations":[76370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140570"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from a cellular membrane.","definition_xrefs":["PMID:28712723","PMID:24821790","PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01435":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"extraction of mislocalized protein from membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140568","terms_by_termid":{"GO:0140569":null,"GO:0140570":null}}


id: PBO:0090466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ste11","termid":"PBO:0090466"}


id: MONDO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoidosis that involves the nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurosarcoidosis","secondary_identifiers":["SCTID:230193008","UMLS:C0393485","icd11.foundation:1479285656","MEDGEN:97948","MESH:C535814"],"synonyms":[{"name":"nervous system sarcoidosis","type":"exact"},{"name":"neurosarcoidosis","type":"exact"},{"name":"sarcoidosis of nervous system","type":"exact"}],"termid":"MONDO:0045047","xrefs":{"Monarch":{"xref_id":"0045047"}}}


id: PBO:0078462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotropin releasing hormone","termid":"PBO:0078462"}


id: PBO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 gamma subunit","termid":"PBO:0002862"}


id: FYPO:0005318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased transcription from MCB promoter","synonyms":[{"name":"decreased transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from MCB promoter during vegetative growth","type":"exact"},{"name":"expression of MBF target genes decreased","type":"related"}],"termid":"FYPO:0005318"}


id: GO:0099610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initiating cycle of an action potential. In vertebrate neurons this typically occurs at an axon hillock. Not all initiated axon potentials propagate.","definition_xrefs":["ISBN:978-0071390118","PMID:19439602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"action potential initiation","synonyms":[{"name":"action potential firing","type":"exact"},{"name":"action potential triggering","type":"exact"}],"termid":"GO:0099610"}


id: MONDO:1012518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune-mediated myositis, non-human animal","termid":"MONDO:1011806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune-mediated myositis, horse","secondary_identifiers":["OMIA:002141-9796"],"termid":"MONDO:1012518","xrefs":{"Monarch":{"xref_id":"1012518"}}}


id: PATO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being short and wide and tapered distally.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullet-shaped","termid":"PATO:0002087"}


id: GO:0090455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ornithine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"ornithine transport","termid":"GO:0015822"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ornithine transmembrane import into vacuole","synonyms":[{"name":"vacuolar ornithine import","type":"related"}],"termid":"GO:0090455"}


id: PBO:0027060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_endo-1,6-beta-glucosidase_activity","termid":"PBO:0027060"}


id: PBO:0077575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane inner ear","termid":"PBO:0077575"}


id: PBO:0088240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glucose/fructose:proton symporter Ght2","termid":"PBO:0088240"}


id: PBO:0073890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 6","termid":"PBO:0073890"}


id: MONDO:1010329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leber congenital amaurosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leber congenital amaurosis, non-human animal","secondary_identifiers":["OMIA:001222"],"termid":"MONDO:1010329","xrefs":{"Monarch":{"xref_id":"1010329"}}}


id: PBO:0045992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 6","termid":"PBO:0045992"}


id: FYPO:0003209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during vegetative growth","termid":"FYPO:0001585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to cell tip, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to cell end, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell tip, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to cell tip abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003209"}


id: PBO:0076926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFDP1 pseudogene 2","termid":"PBO:0076926"}


id: GO:0019340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dibenzofuran, a substance composed of two benzene rings linked by one ether bond and one carbon-carbon bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzofuran metabolic process","termid":"GO:0018893"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dibenzofuran catabolic process","secondary_identifiers":["MetaCyc:P662-PWY"],"synonyms":[{"name":"dibenzofuran breakdown","type":"exact"},{"name":"dibenzofuran catabolism","type":"exact"},{"name":"dibenzofuran degradation","type":"exact"}],"termid":"GO:0019340"}


id: PBO:0038562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABI family member 3 binding protein","termid":"PBO:0038562"}


id: MONDO:1012586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in Japanese ratsnake due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, Japanese ratsnake","secondary_identifiers":["OMIA:000202-31143"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Elaphe climacophora (Japanese ratsnake)","type":"exact"}],"termid":"MONDO:1012586","xrefs":{"Monarch":{"xref_id":"1012586"}}}


id: MONDO:0020232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete musculoskeletal disease with cataract (obsolete MONDO:0020232)","secondary_identifiers":["Orphanet:98648"],"termid":"MONDO:0020232","xrefs":{"Monarch":{"xref_id":"0020232"}}}


id: MONDO:0005319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A traumatic or pathologic injury to the humerus in which the continuity of the humerus is broken.","definition_xrefs":["EFO:0003943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"humerus fracture","secondary_identifiers":["MESH:D006810","SCTID:66308002"],"synonyms":[{"name":"fracture, humeral","type":"exact"},{"name":"fractures, humeral","type":"exact"},{"name":"humeral fracture","type":"exact"}],"termid":"MONDO:0005319","xrefs":{"Monarch":{"xref_id":"0005319"}}}


id: PBO:0067895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 197","termid":"PBO:0067895"}


id: MONDO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of diminution or cessation of secretion of one or more hormones from the anterior pituitary gland. This may result from surgical or radiation ablation, non-secretory pituitary neoplasms, metastatic tumors, infarction, pituitary apoplexy, infiltrative or granulomatous processes, and other conditions.","definition_xrefs":["NCIT:C62591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypopituitarism","secondary_identifiers":["MEDGEN:9386","ICD10CM:E23.0","MESH:D007018","UMLS:C0020635","DOID:9406","SCTID:74728003","NANDO:2100110","icd11.foundation:768216194","NANDO:1200387","EFO:0001380"],"synonyms":[{"name":"pituitary hormone deficiency","type":"exact"},{"name":"pituitary hypofunction","type":"related"},{"name":"pituitary insufficiency","type":"exact"}],"termid":"MONDO:0005152","xrefs":{"Monarch":{"xref_id":"0005152"}}}


id: PBO:0049187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 3","termid":"PBO:0049187"}


id: SO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The central, hydrophobic region of the signal peptide (approx 7-15 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"central_hydrophobic_region_of_signal_peptide","synonyms":[{"name":"H-region","type":"related"},{"name":"central hydrophobic region of signal peptide","type":"exact"},{"name":"central_hydrophobic_region","type":"related"}],"termid":"SO:0100016"}


id: GO:0035986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The assembly of chromatin into senescence-associated heterochromatin foci (SAHF), transcriptionally-silent heterochromatin structures present in senescent cells, containing the condensed chromatin of one chromosome, and enriched for histone modifications. Formation of these chromatin structures is thought to repress expression of proliferation-promoting genes.","definition_xrefs":["PMID:15621527","GOC:yaf","PMID:21248468"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence-associated heterochromatin focus assembly (obsolete GO:0035986)","synonyms":[{"name":"SAHF formation","type":"exact"},{"name":"senescence-associated heterochromatin foci formation","type":"exact"},{"name":"senescence-associated heterochromatin focus formation","type":"exact"}],"termid":"GO:0035986"}


id: GO:0061850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the growth cone which represents the distal part of the structure.","definition_xrefs":["PMID:10797548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell leading edge","termid":"GO:0031252"},{"relation_name":"part_of","term_name":"peripheral region of growth cone","termid":"GO:0090725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone leading edge","termid":"GO:0061850"}


id: PBO:0061303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase puromycin sensitive","termid":"PBO:0061303"}


id: GO:1990710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric mismatch repair complex involved in binding to and correcting insertion/deletion mutations.","definition_xrefs":["PMID:21666597","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MutS complex","synonyms":[{"name":"MutS mismatch repair complex","type":"exact"}],"termid":"GO:1990710"}


id: FYPO:0005753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more 2'-deoxyribonucleoside triphosphates (dNTPs) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular dNTP level","synonyms":[{"name":"normal cellular dNTP level during mitotic cell cycle","type":"related"},{"name":"normal cellular dNTP level during vegetative growth","type":"exact"},{"name":"normal dNTP accumulation","type":"related"}],"termid":"FYPO:0005753"}


id: PBO:0031114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phenotype_during_exponential_phase","termid":"PBO:0031114"}


id: FYPO:0003181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I does not occur.","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished meiotic DNA double-strand break formation","synonyms":[{"name":"absent meiotic DNA double-strand break formation","type":"exact"},{"name":"meiotic DNA double-strand break formation abolished","type":"exact"}],"termid":"FYPO:0003181"}


id: PBO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4 (predicted)","termid":"PBO:0002036"}


id: GO:0039641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer of a virion contained inside the protein capsid.","definition_xrefs":["GOC:bm","PMID:15331712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral membrane","termid":"GO:0036338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner membrane","synonyms":[{"name":"virion inner membrane","type":"exact"}],"termid":"GO:0039641"}


id: PBO:0028124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_pear-shaped_vegetative_cell","termid":"PBO:0028124"}


id: MONDO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system germinoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germinoma","termid":"MONDO:0002999"},{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system germinoma","secondary_identifiers":["UMLS:C1370504","NCIT:C5792","DOID:7867","MEDGEN:234581"],"synonyms":[{"name":"adult CNS germinoma","type":"exact"},{"name":"adult central nervous system germinoma","type":"exact"},{"name":"central nervous system germinoma","type":"broad"},{"name":"central nervous system germinoma of adults","type":"exact"},{"name":"germinoma of adult CNS","type":"exact"},{"name":"germinoma of adult central nervous system","type":"exact"},{"name":"germinoma of the adult CNS","type":"exact"},{"name":"germinoma of the adult central nervous system","type":"exact"}],"termid":"MONDO:0004383","xrefs":{"Monarch":{"xref_id":"0004383"}}}


id: MONDO:0035650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"late-onset Steinert myotonic dystrophy","secondary_identifiers":["MEDGEN:1842603","UMLS:C5680308","Orphanet:589833","GARD:22365","ICD10CM:G71.1"],"synonyms":[{"name":"Late-onset Steinert disease","type":"exact"},{"name":"Late-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035650","xrefs":{"Monarch":{"xref_id":"0035650"}}}


id: GO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:11426647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046426"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"negatively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042527","GO:0042530","GO:0042514","GO:0042512","GO:0042518","GO:0042521","GO:0042524"],"synonyms":[{"name":"down regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"downregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042532"}


id: GO:0102159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate + baicalein = H+ + UDP + baicalin.","definition_xrefs":["RHEA:28314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"baicalein 7-O-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11755"],"termid":"GO:0102159"}


id: GO:1904000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eating behavior.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11961051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"is_a","term_name":"positive regulation of feeding behavior","termid":"GO:2000253"},{"relation_name":"positively_regulates","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eating behavior","synonyms":[{"name":"activation of eating behavior","type":"narrow"},{"name":"activation of eating behaviour","type":"narrow"},{"name":"positive regulation of eating behaviour","type":"exact"},{"name":"up regulation of eating behavior","type":"exact"},{"name":"up regulation of eating behaviour","type":"exact"},{"name":"up-regulation of eating behavior","type":"exact"},{"name":"up-regulation of eating behaviour","type":"exact"},{"name":"upregulation of eating behavior","type":"exact"},{"name":"upregulation of eating behaviour","type":"exact"}],"termid":"GO:1904000"}


id: MONDO:0850010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital optic disk excavation","secondary_identifiers":["GARD:22112","UMLS:C5681348","MEDGEN:1842935","Orphanet:519333"],"termid":"MONDO:0850010","xrefs":{"Monarch":{"xref_id":"0850010"}}}


id: PBO:0071096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 98","termid":"PBO:0071096"}


id: GO:1903605
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96216,109294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a cytochrome.","definition_xrefs":["GOC:TermGenie","PMID:19721088","GOC:dph","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"cytochrome metabolic process","termid":"GO:1903604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome anabolism","type":"exact"},{"name":"cytochrome biosynthesis","type":"exact"},{"name":"cytochrome formation","type":"exact"},{"name":"cytochrome synthesis","type":"exact"}],"termid":"GO:1903605","terms_by_termid":{"GO:1903607":null}}


id: GO:0061497
data:
  {"annotated_genes":["SJAG_07018","SJAG_01215","SJAG_05196","SJAG_03835","SJAG_02609","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102773,104604,110663,111423,112405,113260],"is_not":false,"summary":null,"term":"GO:0061497"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is in the nucleus.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner plaque of spindle pole body","termid":"GO:0005822"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02332":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_05196":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005816","GO:0015630"],"is_obsolete":false,"name":"inner plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061497","terms_by_termid":{"GO:0061497":null}}


id: PBO:0083139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data","termid":"PBO:0083139"}


id: PBO:0049483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.7 linker histone","termid":"PBO:0049483"}


id: GO:0098038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process by which a transposable element is excised from the donor site and integrated at the target site without replication of the element. Also referred to as cut-and-paste transposition.","definition_xrefs":["PMID:2553270","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transposition","termid":"GO:0006313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"non-replicative DNA transposition","synonyms":[{"name":"cut-and-paste transposition","type":"exact"},{"name":"non-replicative transposition, DNA-mediated","type":"exact"}],"termid":"GO:0098038"}


id: PBO:0074241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 52 member 1","termid":"PBO:0074241"}


id: PBO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARF antisense RNA 2","termid":"PBO:0060520"}


id: PBO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 3 pseudogene","termid":"PBO:0061915"}


id: PBO:0111057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase superfamily, implicated in transcription , RNA processing, or RNA export","termid":"PBO:0111057"}


id: PATO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably lower than its width.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shortened","termid":"PATO:0002364"}


id: MONDO:0011284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unequal curvature of the refractive surfaces of the eye. Thus a point source of light cannot be brought to a point focus on the retina but is spread over a more or less diffuse area. This results from the radius of curvature in one plane being longer or shorter than the radius at right angles to it. (Dorland, 27th ed)","definition_xrefs":["MESH:D001251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractive error","termid":"MONDO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"astigmatism","secondary_identifiers":["HP:0000483","MEDGEN:2473","OMIM:603047","DOID:11782","ICD9:367.20","SCTID:82649003","UMLS:C0004106","CSP:1116-1831","ICD10CM:H52.2","icd11.foundation:402558626","ICD9:367.2"],"synonyms":[{"name":"astigmatism","type":"exact"},{"name":"astigmatism (disease)","type":"exact"}],"termid":"MONDO:0011284","xrefs":{"Monarch":{"xref_id":"0011284"}}}


id: PBO:0112645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAse P component","termid":"PBO:0112645"}


id: GO:0071185
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-a3, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-a3 complex","synonyms":[{"name":"Pcdhga1-Pcdhga3 complex","type":"narrow"}],"termid":"GO:0071185"}


id: PBO:0087540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex associates with the V1 domain of the vacuolar membrane (H+)-ATPase (V-ATPase) and promotes assembly and reassembly of the holoenzyme","termid":"PBO:0087540"}


id: PBO:0042594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 8","termid":"PBO:0042594"}


id: PBO:0012260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0012260"}


id: GO:0051847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating the symbiont complement system, e.g. by possessing complement receptors which mediate attachment to, then infection of, symbiont macrophages, which are eventually destroyed. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","gene_count":0,"genotype_count":0,"name":"obsolete active evasion of symbiont immune response via regulation of symbiont complement system (obsolete GO:0051847)","synonyms":[{"name":"active evasion of symbiont immune response via regulation of symbiont complement system","type":"exact"},{"name":"active immune evasion via modulation of symbiont complement system","type":"exact"},{"name":"active immune evasion via regulation of symbiont complement system","type":"exact"}],"termid":"GO:0051847"}


id: MONDO:0013743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of systemic lupus erythematosus (disease) that is caused by mutations in DNASE1L3.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autosomal systemic lupus erythematosus type 16","secondary_identifiers":["GARD:17368","OMIM:614420","Orphanet:300345","MEDGEN:482372","UMLS:C3280742"],"synonyms":[{"name":"SLEB16","type":"exact"},{"name":"autosomal SLE","type":"broad"},{"name":"familial SLE","type":"broad"},{"name":"familial systemic lupus erythematosus","type":"broad"},{"name":"systemic lupus erythematosus 16","type":"exact"},{"name":"systemic lupus erythematosus type 16","type":"exact"}],"termid":"MONDO:0013743","xrefs":{"Monarch":{"xref_id":"0013743"}}}


id: PBO:0013109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP GTPase subunit Cwf10","termid":"PBO:0013109"}


id: PBO:0055150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2569","termid":"PBO:0055150"}


id: MONDO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete succinic semialdehyde dehydrogenase deficiency (obsolete MONDO:0000697)","termid":"MONDO:0000697","xrefs":{"Monarch":{"xref_id":"0000697"}}}


id: GO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta1-adrenergic receptors.","definition_xrefs":["IUPHAR_GPCR:1274","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"beta1-adrenergic receptor activity","synonyms":[{"name":"beta1 adrenoceptor","type":"exact"}],"termid":"GO:0004940"}


id: PBO:0078049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 39","termid":"PBO:0078049"}


id: PBO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repetin","termid":"PBO:0072547"}


id: MONDO:0800410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced skin damage, susceptibility to","secondary_identifiers":["UMLS:C2678403","MEDGEN:394510"],"termid":"MONDO:0800410","xrefs":{"Monarch":{"xref_id":"0800410"}}}


id: PBO:0067584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 743, pseudogene","termid":"PBO:0067584"}


id: MONDO:0003205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the renal pelvis","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"},{"relation_name":"is_a","term_name":"renal pelvis carcinoma","termid":"MONDO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"renal pelvis adenocarcinoma","secondary_identifiers":["DOID:4918","NCIT:C6143","UMLS:C1335748","MEDGEN:277590"],"synonyms":[{"name":"adenocarcinoma of kidney pelvis","type":"exact"},{"name":"adenocarcinoma of renal pelvis","type":"exact"},{"name":"adenocarcinoma of the kidney pelvis","type":"exact"},{"name":"adenocarcinoma of the renal pelvis","type":"exact"},{"name":"kidney pelvis adenocarcinoma","type":"exact"},{"name":"kidney renal pelvis adenocarcinoma","type":"exact"},{"name":"renal pelvis adenocarcinoma","type":"exact"}],"termid":"MONDO:0003205","xrefs":{"Monarch":{"xref_id":"0003205"}}}


id: PBO:0090150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear inner membrane protein Man1, Sad1 interacting factor","termid":"PBO:0090150"}


id: PBO:0083093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage and meiotic pachytene checkpoint protein; subunit of a heterotrimeric complex (Rad17p-Mec3p-Ddc1p) that forms a sliding clamp, loaded onto partial duplex DNA by a clamp loader complex; homolog of human and S. pombe Hus1","termid":"PBO:0083093"}


id: PR:Q09790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aps1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol polyphosphate phosphohydrolase aps1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.14","synonyms":[{"name":"Ap6A hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aps1","type":"exact"},{"name":"diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diadenosine hexaphosphate hydrolase (ADP-forming) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09790"}


id: PBO:0043980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock domain containing E1","termid":"PBO:0043980"}


id: GO:0022825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete copper-exporting ATPase activity (obsolete GO:0022825)","synonyms":[{"name":"copper-exporting ATPase activity","type":"exact"}],"termid":"GO:0022825"}


id: MONDO:0016575
data:
  {"annotated_genes":["SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014909"}]},"cv_name":"mondo","definition":"A rare, genetically heterogeneous, primarily respiratory disorder characterized by chronic upper and lower respiratory tract disease. Approximately half of PCD patients have an organ laterality defect (situs inversus totalis or situs ambiguus/heterotaxy).","definition_xrefs":["Orphanet:244"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete male infertility due to sperm motility disorder (obsolete MONDO:0018395)","termid":"MONDO:0018395"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03794":null},"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:3467","NCIT:C84797","SCTID:86204009","DOID:0050144","MedDRA:10069713","MESH:D002925","MESH:D007619","NANDO:2200203","SCTID:42402006","DOID:9562","GARD:4484","icd11.foundation:1713839459","NANDO:2200204","NORD:1605","NANDO:2100034","OMIMPS:244400","UMLS:C0008780"],"synonyms":[{"name":"Dextrocardia bronchiectasis and sinusitis","type":"related"},{"name":"Dextrocardia-bronchiectasis-sinusitis syndrome","type":"related"},{"name":"ICS","type":"related"},{"name":"Immotile cilia syndrome, Kartagener type","type":"related"},{"name":"Kartagener syndrome","type":"exact"},{"name":"Kartagener's syndrome","type":"exact"},{"name":"PCD","type":"exact"},{"name":"Primary ciliary dyskinesia and situs inversus","type":"related"},{"name":"Primary ciliary dyskinesia, Kartagener type","type":"related"},{"name":"Siewert syndrome","type":"related"},{"name":"bronchiectasis, chronic sinusitis and dextrocardia syndrome","type":"related"},{"name":"ciliary dyskinesia primary","type":"related"},{"name":"ciliary motility disorder","type":"exact"},{"name":"immotile ciliary syndrome","type":"exact"}],"termid":"MONDO:0016575","terms_by_termid":{"MONDO:0014909":null},"xrefs":{"Monarch":{"xref_id":"0016575"}}}


id: PBO:0005414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex32 (predicted)","termid":"PBO:0005414"}


id: GO:0042443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["ISBN:0395825172","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine metabolic process","synonyms":[{"name":"phenylethylamine metabolism","type":"exact"}],"termid":"GO:0042443"}


id: CHEBI:16284
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dATP","termid":"CHEBI:16284"}


id: MONDO:0018014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient neonatal multiple acyl-CoA dehydrogenase deficiency describes a very rare condition where a maternal riboflavin deficiency causes an infant to present with manifestations similar to those seen in multiple acyl-CoA dehydrogenase (MAD) deficiency such as poor suck, metabolic acidosis and hypoglycemia, but that resolves completely with oral riboflavin. In the one patient described haploinsufficiency of the human riboflavin transporter (hRFT1) was described in the mother.","definition_xrefs":["Orphanet:329942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase deficiency","termid":"MONDO:0017714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"transient neonatal multiple acyl-CoA dehydrogenase deficiency","secondary_identifiers":["SCTID:723552005","MEDGEN:1373921","GARD:21498","UMLS:C4509950"],"synonyms":[{"name":"transient neonatal MAD deficiency","type":"exact"},{"name":"transient neonatal MADD","type":"exact"},{"name":"transient neonatal glutaric acidemia type 2","type":"exact"},{"name":"transient neonatal glutaric aciduria type 2","type":"exact"}],"termid":"MONDO:0018014","xrefs":{"Monarch":{"xref_id":"0018014"}}}


id: PBO:0085149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside diphosphate kinase; catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085149"}


id: GO:0055081
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of monoatomic anions within an organism or cell. Monatomic anions (also called simple anions) are anions consisting of exactly one atom.","definition_xrefs":["GOC:ceb","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion homeostasis","termid":"GO:0050801"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monoatomic anion homeostasis","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"anion homeostasis","type":"broad"}],"termid":"GO:0055081","terms_by_termid":{"GO:0055064":null}}


id: GO:0017008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycobiliviolin to phycoerythrocyanin.","definition_xrefs":["RESID:AA0258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycobiliviolin linkage","termid":"GO:0017008"}


id: GO:0008097
data:
  {"annotated_genes":["SJAG_04066","SJAG_00323","SJAG_00067","SJAG_01568"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72792,73809,74088,90690],"is_not":false,"summary":null,"term":"GO:0008097"}]},"cv_name":"molecular_function","definition":"Binding to a 5S ribosomal RNA, the smallest RNA constituent of a ribosome.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00323":null,"SJAG_01568":null,"SJAG_04066":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"5S rRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008097","terms_by_termid":{"GO:0008097":null}}


id: PBO:0056052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 2, pre-mRNA splicing factor","termid":"PBO:0056052"}


id: PBO:0090163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin-beta family nuclear import receptor Mtr10","termid":"PBO:0090163"}


id: FYECO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which histidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ his","synonyms":[{"name":"histidine added","type":"exact"}],"termid":"FYECO:0000224"}


id: GO:1902140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16496115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inositol","termid":"GO:1902140"}


id: GO:0000935
data:
  {"annotated_genes":["SJAG_04776","SJAG_01181","SJAG_02379","SJAG_01835","SJAG_01855","SJAG_01787","SJAG_03379","SJAG_01456","SJAG_01754","SJAG_03655","SJAG_01453","SJAG_02166","SJAG_05001","SJAG_00610","SJAG_03748","SJAG_02169","SJAG_01171","SJAG_00514","SJAG_03453","SJAG_01774","SJAG_01799","SJAG_05285","SJAG_01196","SJAG_00442","SJAG_04690","SJAG_03705","SJAG_03581","SJAG_04666","SJAG_02916","SJAG_03704","SJAG_00667","SJAG_01718","SJAG_01888","SJAG_04322","SJAG_02215","SJAG_02222","SJAG_01290","SJAG_04901","SJAG_04771","SJAG_04668","SJAG_00669","SJAG_03753","SJAG_02022"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69339,71824,73326,89275,89293,90041,90232,91503,92484,92513,92533,92608,94033,94165,94184,95331,95507,96350,97437,98642,101525,101975,102718,103732,103733,104437,105281,106463,107907,108082,111927,112805,113193,114912,115877,116215,118404,119736,119750],"is_not":false,"summary":null,"term":"GO:0000935"},{"annotations":[58688,101937,65166,117657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000936"}]},"cv_name":"cellular_component","definition":"A cell septum which forms as part of the division site and functions in the compartmentalization of a cell into two daughter cells at division. A division septum spans a cell and does not allow exchange of organelles or cytoplasm between compartments.","definition_xrefs":["GOC:clt","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell septum","termid":"GO:0030428"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_00667":null,"SJAG_00669":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01196":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01718":null,"SJAG_01754":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01799":null,"SJAG_01835":null,"SJAG_01855":null,"SJAG_01888":null,"SJAG_02022":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02379":null,"SJAG_02916":null,"SJAG_03379":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_03655":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03753":null,"SJAG_04322":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04690":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04901":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"division septum","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0043187"],"synonyms":[{"name":"cell septum surface","type":"related"},{"name":"complete septum","type":"exact"},{"name":"septum surface","type":"broad"}],"termid":"GO:0000935","terms_by_termid":{"GO:0000935":null,"GO:0000936":null}}


id: MONDO:0008866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of bifid nose.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bifid nose","termid":"MONDO:0000110"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"bifid nose, autosomal recessive","secondary_identifiers":["MEDGEN:854359","OMIM:210400","UMLS:C3887497","GARD:15142"],"synonyms":[{"name":"Nose, Median cleft of","type":"related"},{"name":"autosomal recessive bifid nose","type":"exact"},{"name":"bifid nose, autosomal recessive","type":"exact"},{"name":"median fissure of Nose","type":"related"}],"termid":"MONDO:0008866","xrefs":{"Monarch":{"xref_id":"0008866"}}}


id: PBO:0039962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 5","termid":"PBO:0039962"}


id: MONDO:0000736
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014169"}]},"cv_name":"mondo","definition":"A pigmentation disease characterized by reticulate hyper- and hypo-pigmentated macules in a generalized distribution.","definition_xrefs":["PMID:12372090","DOID:0060304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyschromatosis universalis hereditaria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2930995","GARD:1996","Orphanet:241","SCTID:239082002","MEDGEN:419691","OMIMPS:127500","NCIT:C173131","MESH:C535730"],"synonyms":[{"name":"DUH","type":"related"},{"name":"dyschromatosis universalis","type":"exact"}],"termid":"MONDO:0000736","terms_by_termid":{"MONDO:0014169":null},"xrefs":{"Monarch":{"xref_id":"0000736"}}}


id: FYPO:0007922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cysteine  above normal physiological concentrations. Cells stop growing (and may die) at a concentration of cysteine that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cysteine","synonyms":[{"name":"sensitive to cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0007922"}


id: GO:0000136
data:
  {"annotated_genes":["SJAG_03555","SJAG_01276","SJAG_04770","SJAG_00816","SJAG_04095"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71735],"is_not":false,"summary":null,"term":"GO:0000136"},{"annotations":[59931,89263,119904,71426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"A protein complex with alpha-(1->6)-mannosyltransferase activity, located in the cis Golgi membrane; adds mannan to N-linked glycans on proteins.","definition_xrefs":["PMID:11095735","GOC:mcc","PMID:18083825","PMID:10037752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"Golgi cis cisterna","termid":"GO:0000137"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00816":null,"SJAG_01276":null,"SJAG_03555":null,"SJAG_04095":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"mannan polymerase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"alpha-1,6-mannosyltransferase complex","type":"exact"}],"termid":"GO:0000136","terms_by_termid":{"GO:0000136":null,"GO:0140497":null}}


id: PBO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 2","termid":"PBO:0052234"}


id: MONDO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with epilepsy as a major feature (obsolete MONDO:0018287)","secondary_identifiers":["Orphanet:371071"],"synonyms":[{"name":"CDG with epilepsy as a major feature","type":"exact"}],"termid":"MONDO:0018287","xrefs":{"Monarch":{"xref_id":"0018287"}}}


id: GO:0140203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of spermidine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine import across plasma membrane","termid":"GO:0140202"},{"relation_name":"is_a","term_name":"spermidine transmembrane transport","termid":"GO:1903711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"spermidine import across plasma membrane","termid":"GO:0140203"}


id: MONDO:0021476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the tongue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"tongue neoplasm","termid":"MONDO:0021240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of tongue","secondary_identifiers":["SCTID:92443005","MEDGEN:57573","NCIT:C3592","UMLS:C0153933","ICD10CM:D10.1","icd11.foundation:487744161","ICD9:210.1"],"synonyms":[{"name":"benign neoplasm of the tongue","type":"exact"},{"name":"benign tongue neoplasm","type":"exact"},{"name":"benign tongue tumor","type":"exact"},{"name":"benign tongue tumour","type":"exact"},{"name":"benign tumor of the tongue","type":"exact"},{"name":"benign tumor of tongue","type":"exact"},{"name":"benign tumour of the tongue","type":"exact"},{"name":"benign tumour of tongue","type":"exact"},{"name":"tongue benign neoplasm","type":"exact"},{"name":"tongue neoplasm, benign","type":"exact"}],"termid":"MONDO:0021476","xrefs":{"Monarch":{"xref_id":"0021476"}}}


id: PBO:0065447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 4","termid":"PBO:0065447"}


id: MONDO:0037398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary disease characterized by primary or nonbacteremic pneumonia most frequently arising in an intensive care setting, or bacteremic pneumonia, which is typically associated with neutropenia. Chronic lower respiratory tract infection with development of episodes of pneumonia is common in patients with cystic fibrosis. Acute infections are potentially life-threatening. Patients present with fever, chills, dyspnea, cyanosis, productive cough, as well as signs of severe systemic toxicity. Alveolar hemorrhage, necrosis, and, eventually, cavity formation, are commonly seen.","definition_xrefs":["Orphanet:90066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Pseudomonas aeruginosa infectious disease","termid":"MONDO:0040732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by pseudomonas aeruginosa infection","secondary_identifiers":["icd11.foundation:801706385","UMLS:C0920182","MEDGEN:852026","GARD:13613"],"termid":"MONDO:0037398","xrefs":{"Monarch":{"xref_id":"0037398"}}}


id: PATO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of extent of the receptiveness of a female to male advances.","definition_xrefs":["GO:GO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptivity","termid":"PATO:0001719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female receptivity","termid":"PATO:0001720"}


id: GO:1901148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any gene expression that is involved in extracellular matrix organization. Gene expression includes both transcription to produce an RNA transcript, and the translation of that mRNA into protein. Protein maturation is included in gene expression when required to form an active form of a product from an inactive precursor form.","definition_xrefs":["GOC:TermGenie","PMID:18668558","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"},{"relation_name":"part_of","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"gene expression involved in extracellular matrix organization","synonyms":[{"name":"expression of extracellular matrix proteins","type":"exact"},{"name":"extracellular matrix protein production","type":"related"}],"termid":"GO:1901148"}


id: PBO:0056965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23b","termid":"PBO:0056965"}


id: FYPO:0006176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cortical patch localization is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of actin cortical patch localization","synonyms":[{"name":"decreased rate of actin cortical patch localisation","type":"exact"},{"name":"decreased rate of actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin cortical patch localization during vegetative growth","type":"exact"},{"name":"decreased rate of actin cortical patch movement","type":"related"},{"name":"decreased rate of actin patch localization","type":"exact"},{"name":"reduced rate of actin cortical patch localization","type":"exact"}],"termid":"FYPO:0006176"}


id: GO:0098996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell capsule to allow entry into the host cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell envelope","termid":"GO:0098933"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell glycocalyx","secondary_identifiers":["VZ:3938"],"synonyms":[{"name":"catabolism of host glycocalyx during viral entry","type":"exact"},{"name":"degradation of host capsule during virus entry","type":"exact"},{"name":"degradation of host glycocalyx during viral entry","type":"exact"},{"name":"disassembly of glycocalyx during viral entry","type":"exact"},{"name":"disruption of host cell glycocalyx during viral entry","type":"exact"},{"name":"symbiont entry into host cell by disruption of host cell capsule","type":"exact"}],"termid":"GO:0098996"}


id: GO:0004141
data:
  {"annotated_genes":["SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77866],"is_not":false,"summary":null,"term":"GO:0004141"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-diaminononanoate + ATP + CO2 = ADP + dethiobiotin + 4 H+ + phosphate.","definition_xrefs":["RHEA:15805","EC:6.3.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"dethiobiotin synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03182","MetaCyc:DETHIOBIOTIN-SYN-RXN"],"synonyms":[{"name":"7,8-diaminononanoate:carbon-dioxide cyclo-ligase (ADP-forming)","type":"related"},{"name":"DTB synthetase activity","type":"related"},{"name":"desthiobiotin synthase activity","type":"related"}],"termid":"GO:0004141","terms_by_termid":{"GO:0004141":null}}


id: GO:0102753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + chlorophyllide b(1-) + 2-trans,6-trans,10-trans-geranylgeranyl diphosphate = geranylgeranyl-chlorophyll b + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorophyllide b:geranyl-geranyl diphosphate geranyl-geranyltransferase activity (obsolete GO:0102753)","termid":"GO:0102753"}


id: PBO:0063568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase C","termid":"PBO:0063568"}


id: FYPO:0001691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing paraquat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on paraquat","synonyms":[{"name":"normal cell population growth in presence of paraquat","type":"exact"},{"name":"normal cell population growth on paraquat","type":"exact"},{"name":"normal cellular response to paraquat","type":"related"},{"name":"normal vegetative cell population growth on paraquat","type":"exact"}],"termid":"FYPO:0001691"}


id: MONDO:0850078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic non-specific multisutural craniosynostosis","secondary_identifiers":["GARD:22475","MEDGEN:1842261","Orphanet:620158","UMLS:C5680398"],"termid":"MONDO:0850078","xrefs":{"Monarch":{"xref_id":"0850078"}}}


id: MONDO:0016551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital primary megaureter","termid":"MONDO:0018960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital primary megaureter, refluxing form","secondary_identifiers":["GARD:20641","icd11.foundation:1229028805","MEDGEN:1842549","Orphanet:238650","UMLS:C5680935"],"termid":"MONDO:0016551","xrefs":{"Monarch":{"xref_id":"0016551"}}}


id: GO:0002949
data:
  {"annotated_genes":["SJAG_04182","SJAG_04201","SJAG_04700","SJAG_00865","SJAG_06560","SJAG_02863","SJAG_00378"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59075,80433,100063,101241,102928],"is_not":false,"summary":null,"term":"GO:0002949"},{"annotations":[120485,77159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["PMID:23258706","GOC:imk","PMID:19287007","PMID:21183954","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_00865":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04700":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070526"],"synonyms":[{"name":"t6A biosynthesis","type":"exact"},{"name":"t6A biosynthetic process","type":"exact"},{"name":"t6A tRNA modification","type":"exact"},{"name":"threonylcarbamoyladenosine anabolism","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthesis","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthetic process","type":"exact"},{"name":"threonylcarbamoyladenosine formation","type":"exact"},{"name":"threonylcarbamoyladenosine synthesis","type":"exact"}],"termid":"GO:0002949","terms_by_termid":{"GO:0002949":null,"GO:0072670":null}}


id: MONDO:0013513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNJ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 9","secondary_identifiers":["MEDGEN:462781","OMIM:613980","GARD:15737","UMLS:C3151431"],"synonyms":[{"name":"ATFB9","type":"related"},{"name":"KCNJ2 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 9","type":"exact"},{"name":"atrial fibrillation, familial, type 9","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNJ2","type":"exact"}],"termid":"MONDO:0013513","xrefs":{"Monarch":{"xref_id":"0013513"}}}


id: GO:0103103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 9-methylthiononylhydroximate = 8-methylthiooctyldesulfoglucosinolate + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose: 9-methylthiononylhydroximate S-glucosyltransferase activity (obsolete GO:0103103)","termid":"GO:0103103"}


id: MONDO:0021437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lipoma that involves the stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign neoplasm of stomach","termid":"MONDO:0021449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"lipoma of stomach","secondary_identifiers":["MEDGEN:234299","SCTID:695751021000132104","UMLS:C1333777","NCIT:C5258"],"synonyms":[{"name":"gastric lipoma","type":"exact"},{"name":"lipoma of the stomach","type":"exact"},{"name":"stomach lipoma","type":"exact"}],"termid":"MONDO:0021437","xrefs":{"Monarch":{"xref_id":"0021437"}}}


id: GO:0008836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + H+ = L-lysine + CO2.","definition_xrefs":["EC:4.1.1.20","RHEA:15101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"diaminopimelate decarboxylase activity","secondary_identifiers":["MetaCyc:DIAMINOPIMDECARB-RXN","KEGG_REACTION:R00451"],"synonyms":[{"name":"DAP decarboxylase activity","type":"related"},{"name":"DAP-decarboxylase activity","type":"related"},{"name":"diaminopimelic acid decarboxylase activity","type":"related"},{"name":"meso-2,6-diaminoheptanedioate carboxy-lyase (L-lysine-forming)","type":"related"},{"name":"meso-2,6-diaminoheptanedioate carboxy-lyase activity","type":"related"},{"name":"meso-diaminopimelate decarboxylase activity","type":"related"}],"termid":"GO:0008836"}


id: GO:1901675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 acetylation (obsolete GO:1901675)","synonyms":[{"name":"down regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down regulation of histone H3K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down-regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3K27 acetylation","type":"exact"},{"name":"downregulation of histone H3 acetylation at K27","type":"exact"},{"name":"downregulation of histone H3-K27 acetylation","type":"exact"},{"name":"downregulation of histone H3K27 acetylation","type":"exact"},{"name":"inhibition of histone H3 acetylation at K27","type":"exact"},{"name":"inhibition of histone H3-K27 acetylation","type":"narrow"},{"name":"inhibition of histone H3K27 acetylation","type":"exact"},{"name":"negative regulation of histone H3 acetylation at K27","type":"exact"},{"name":"negative regulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901675"}


id: MONDO:0016793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder due to a point mutation of mitochondrial DNA (obsolete MONDO:0016793)","secondary_identifiers":["Orphanet:254776","NANDO:2200524"],"synonyms":[{"name":"OXPHOS disease due to a point mutation of mitochondrial DNA","type":"exact"},{"name":"OXPHOS disease due to a point mutation of mtDNA","type":"exact"},{"name":"mitochondrial oxidative phosphorylation disorder due to a point mutation of mtDNA","type":"exact"}],"termid":"MONDO:0016793","xrefs":{"Monarch":{"xref_id":"0016793"}}}


id: PBO:0083880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase; reduces a specific subset of siderophore-bound iron prior to uptake by transporters; expression induced by low iron levels","termid":"PBO:0083880"}


id: PBO:0117158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH2 antisense RNA 1","termid":"PBO:0117158"}


id: GO:0033459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GAA codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033459"}


id: PBO:0069281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 537, pseudogene","termid":"PBO:0069281"}


id: PATO:0001983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's two basal lobes being united together.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perfoliate","termid":"PATO:0001983"}


id: MONDO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete posterior polar cataract (obsolete MONDO:0000348)","secondary_identifiers":["DOID:0050537"],"synonyms":[{"name":"cataract, posterior polar","type":"exact"},{"name":"obsolete posterior polar cataract (disease)","type":"exact"}],"termid":"MONDO:0000348","xrefs":{"Monarch":{"xref_id":"0000348"}}}


id: GO:0015228
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72175],"is_not":false,"summary":null,"term":"GO:0015228"}]},"cv_name":"molecular_function","definition":"Enables the transfer of coenzyme A from one side of a membrane to the other. Coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, is an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"coenzyme A transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9837333","Reactome:R-HSA-199216"],"synonyms":[{"name":"coenzyme A transporter activity","type":"broad"}],"termid":"GO:0015228","terms_by_termid":{"GO:0015228":null}}


id: PBO:0062614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 2 pseudogene","termid":"PBO:0062614"}


id: PBO:0050457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 3","termid":"PBO:0050457"}


id: MONDO:1010302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scoliosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, non-human animal","secondary_identifiers":["OMIA:000891"],"termid":"MONDO:1010302","xrefs":{"Monarch":{"xref_id":"1010302"}}}


id: PBO:0063357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purkinje cell protein 2","termid":"PBO:0063357"}


id: PBO:0001284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ebp2 (predicted)","termid":"PBO:0001284"}


id: PBO:0055403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2833","termid":"PBO:0055403"}


id: PBO:0063537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation and apoptosis adaptor protein 15","termid":"PBO:0063537"}


id: MONDO:0022874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis hypopituitarism","termid":"MONDO:0022874","xrefs":{"Monarch":{"xref_id":"0022874"}}}


id: PBO:0066066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor alpha","termid":"PBO:0066066"}


id: GO:0019218
data:
  {"annotated_genes":["SJAG_01307","SJAG_04018","SJAG_02104","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[111675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[77177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[90332,107644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of steroid metabolism","type":"exact"}],"termid":"GO:0019218","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0065277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2A","termid":"PBO:0065277"}


id: MONDO:0024654
data:
  {"annotated_genes":["SJAG_03843","SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[88787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013378"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects structures of the skull.","definition_xrefs":["NCIT:C27655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03429":null,"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"skull disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:118945008","UMLS:C1290854","MEDGEN:226937"],"synonyms":[{"name":"disease of skull","type":"exact"},{"name":"disease or disorder of skull","type":"exact"},{"name":"disorder of skull","type":"exact"},{"name":"skull disease","type":"exact"},{"name":"skull disease or disorder","type":"exact"},{"name":"skull disorder","type":"exact"}],"termid":"MONDO:0024654","terms_by_termid":{"MONDO:0009050":null,"MONDO:0013378":null},"xrefs":{"Monarch":{"xref_id":"0024654"}}}


id: FYPO:0005266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium dodecyl sulfate (SDS) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to sodium dodecyl sulfate","synonyms":[{"name":"resistance to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to sodium dodecyl sulphate","type":"exact"},{"name":"resistant to SDS","type":"exact"},{"name":"resistant to sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0005266"}


id: GO:0004246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a C-terminal dipeptide, Xaa-Xbb from oligopeptide-Xaa-Xbb, when Xaa is not Pro, and Xbb is neither Asp nor Glu. Converts angiotensin I to angiotensin II.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-dipeptidase A activity (obsolete GO:0004246)","synonyms":[{"name":"ACE activity","type":"broad"},{"name":"peptidyl-dipeptidase A activity","type":"exact"}],"termid":"GO:0004246"}


id: MONDO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulva adenocarcinoma (obsolete MONDO:0002208)","termid":"MONDO:0002208","xrefs":{"Monarch":{"xref_id":"0002208"}}}


id: GO:2000423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte chemotaxis","termid":"GO:0071623"},{"relation_name":"is_a","term_name":"negative regulation of eosinophil migration","termid":"GO:2000417"},{"relation_name":"is_a","term_name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"},{"relation_name":"negatively_regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil chemotaxis","termid":"GO:2000423"}


id: GO:1903432
data:
  {"annotated_genes":["SJAG_00561","SJAG_04235","SJAG_02389","SJAG_03405","SJAG_04249","SJAG_00688","SJAG_03974","SJAG_03089","SJAG_01184","SJAG_00875","SJAG_01187","SJAG_03799","SJAG_03678","SJAG_03355","SJAG_03501","SJAG_01983","SJAG_02424","SJAG_00457","SJAG_02605","SJAG_01142","SJAG_03486","SJAG_00991","SJAG_04910","SJAG_05346","SJAG_04496","SJAG_03072","SJAG_02231","SJAG_00209","SJAG_05184","SJAG_03928","SJAG_00824","SJAG_01032","SJAG_02765","SJAG_00169","SJAG_03371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94668,95827,109662,117324,119645],"is_not":false,"summary":null,"term":"GO:1903432"},{"annotations":[95101,97881,116416,118326,103249,108961,117969,118890,120086,111497,81620,119893,62840,100660,111090,114996,75338,89788,115814,75231,101357,104810,106937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[77079,96092,97882,112368,90078,77589,78467,75683,114699,74216,78129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_03928":null,"SJAG_03974":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1903432","terms_by_termid":{"GO:1903432":null,"GO:1904262":null,"GO:1904263":null}}


id: PBO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 18","termid":"PBO:0072392"}


id: PBO:0080663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 9","termid":"PBO:0080663"}


id: GO:0140054
data:
  {"annotated_genes":["SJAG_01205"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140172"},{"annotations":[111143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140173"}]},"cv_name":"molecular_function","definition":"A histone reader that specifically binds either to an unmodified histone H2A or a form modified by a post-translational modification on a specific residue. The most common PTMs on histones are methylation, acetylation and phosphorylation.","definition_xrefs":["PMID:11498575","PMID:34726351","PMID:25688442","PMID:31082667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090","GO:0140566"],"is_obsolete":false,"name":"histone H2A reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H2A reader","type":"exact"}],"termid":"GO:0140054","terms_by_termid":{"GO:0140172":null,"GO:0140173":null}}


id: MONDO:0009598
data:
  {"annotated_genes":["SJAG_00602"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87187],"is_not":false,"summary":null,"term":"MONDO:0009598"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia-retinitis pigmentosa syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17017","MEDGEN:381579","MESH:C565398","Orphanet:166035","OMIM:250410","UMLS:C1855188"],"synonyms":[{"name":"RPSKA","type":"related"},{"name":"brachydactyly-short stature-retinitis pigmentosa syndrome","type":"related"},{"name":"metaphyseal chondrodysplasia with retinitis pigmentosa","type":"related"},{"name":"retinitis pigmentosa with or without skeletal anomalies","type":"related"}],"termid":"MONDO:0009598","terms_by_termid":{"MONDO:0009598":null},"xrefs":{"Monarch":{"xref_id":"0009598"}}}


id: GO:0016697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor","secondary_identifiers":["EC:1.12.2.-","GO:0016698"],"termid":"GO:0016697"}


id: PBO:0048770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEM interacting protein","termid":"PBO:0048770"}


id: PBO:0029227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_EPC","termid":"PBO:0029227"}


id: MONDO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes and extranodal sites. The clinical course is typically aggressive.","definition_xrefs":["PMID:22700722","NCIT:C7528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"angioimmunoblastic T-cell lymphoma","secondary_identifiers":["ICD10CM:C86.5","GARD:11973","MedDRA:10002449","DOID:0111147","NORD:784","MESH:D007119","icd11.foundation:1254954229","ICDO:9705/3","EFO:0000255","NANDO:2200029","ICD9:202.70","ONCOTREE:AITL","ICDO:9767/1","Orphanet:86886","SCTID:413537009","UMLS:C0020981","MEDGEN:7025"],"synonyms":[{"name":"AILD","type":"exact"},{"name":"AILT","type":"exact"},{"name":"AITL","type":"related"},{"name":"T-cell lymphoma, AILD type","type":"exact"},{"name":"angioimmunoblastic T-cell lymphoma","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy type T-cell lymphoma","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy with Dysproteinemia","type":"exact"},{"name":"immunoblastic lymphadenopathy","type":"exact"},{"name":"lymphogranulomatosis X","type":"exact"}],"termid":"MONDO:0004977","xrefs":{"Monarch":{"xref_id":"0004977"}}}


id: GO:1901077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of muscle","termid":"GO:1901077"}


id: GO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature myeloid dendritic cell acquires the specialized features of a mature myeloid dendritic cell as part of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation involved in immune response","termid":"GO:0002277"},{"relation_name":"is_a","term_name":"myeloid dendritic cell differentiation","termid":"GO:0043011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell differentiation involved in immune response","synonyms":[{"name":"myeloid dendritic cell differentiation during immune response","type":"related"}],"termid":"GO:0002284"}


id: MONDO:0014562
data:
  {"annotated_genes":["SJAG_00721"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87169],"is_not":false,"summary":null,"term":"MONDO:0014562"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616276","MEDGEN:1799985","UMLS:C5568562","GARD:17796","Orphanet:457185","DOID:0070244"],"synonyms":[{"name":"COQ10D7","type":"related"},{"name":"COQ4-related neonatal encephalomyopathy","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 7","type":"related"},{"name":"coenzyme Q10 deficiency, primary, type 7","type":"exact"},{"name":"primary coenzyme Q10 deficiency 7","type":"related"}],"termid":"MONDO:0014562","terms_by_termid":{"MONDO:0014562":null},"xrefs":{"Monarch":{"xref_id":"0014562"}}}


id: GO:0043827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine57/adenosine58 in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N1-methyladenosine57/N1-methyladenosine58 in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:41740","PMID:20483913","PMID:14739239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0003674","GO:0140098","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"tRNA (adenine(57)-N1)/(adenine(58)-N1)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.219"],"synonyms":[{"name":"tRNA (adenine(57)-N(1))/(adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-)/(adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-/adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58 N1-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N(1)-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N1-) methyltransferase activity","type":"exact"}],"termid":"GO:0043827"}


id: PBO:0111533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, implicated in rRNA processing","termid":"PBO:0111533"}


id: MONDO:0018170
data:
  {"annotated_genes":["SJAG_04148","SJAG_03361","SJAG_00933","SJAG_01185","SJAG_00093","SJAG_04000","SJAG_03182","SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[86830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[87638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[87562,87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[87560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[87566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"Nephrotic syndrome for which no cause has been identified.","definition_xrefs":["NCIT:C122796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome","termid":"MONDO:0005377"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_04000":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic nephrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200719","Orphanet:357502","MEDGEN:501252","UMLS:C3496337","GARD:21539"],"termid":"MONDO:0018170","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null},"xrefs":{"Monarch":{"xref_id":"0018170"}}}


id: PBO:0004474
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.70","termid":"PBO:0004474"}


id: PBO:0040941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 12","termid":"PBO:0040941"}


id: MONDO:0004788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the squamous epithelium of the cervix.","definition_xrefs":["NCIT:C6342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical benign neoplasm","termid":"MONDO:0000644"},{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervix squamous papilloma","secondary_identifiers":["MEDGEN:237038","DOID:9445","UMLS:C1336900"],"synonyms":[{"name":"cervical squamous papilloma","type":"exact"},{"name":"cervix squamous papilloma","type":"exact"},{"name":"cervix uteri squamous papilloma","type":"exact"},{"name":"squamous papilloma of cervix","type":"exact"},{"name":"squamous papilloma of cervix uteri","type":"exact"},{"name":"squamous papilloma of the cervix","type":"exact"},{"name":"squamous papilloma of the cervix uteri","type":"exact"},{"name":"squamous papilloma of the uterine cervix","type":"exact"},{"name":"squamous papilloma of uterine cervix","type":"exact"},{"name":"uterine cervix squamous papilloma","type":"exact"}],"termid":"MONDO:0004788","xrefs":{"Monarch":{"xref_id":"0004788"}}}


id: GO:0099240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of synaptic membrane (obsolete GO:0099240)","synonyms":[{"name":"intrinsic to synaptic membrane","type":"narrow"}],"termid":"GO:0099240"}


id: PBO:0090502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Rng2-like","termid":"PBO:0090502"}


id: GO:1904186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly ofa post-anaphase microtubule array.","definition_xrefs":["PMID:15004232","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anaphase microtubule array organization","synonyms":[{"name":"PAA organization","type":"exact"},{"name":"post-anaphase array organization","type":"exact"},{"name":"post-anaphase microtubule array organisation","type":"exact"}],"termid":"GO:1904186"}


id: PBO:0033784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaphase-promoting_complex-dependent_protein_catabolic_process","termid":"PBO:0033784"}


id: MONDO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the squamous cells of the epidermis. Skin squamous cell carcinoma is most commonly found on sun-exposed areas. The majority of the tumors are well-differentiated.","definition_xrefs":["NCIT:C4819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin squamous cell carcinoma","secondary_identifiers":["SCTID:254651007","DOID:3151","MEDGEN:107512","ONCOTREE:CSCC","UMLS:C0553723"],"synonyms":[{"name":"CSCC","type":"related"},{"name":"cutaneous squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of skin","type":"exact"},{"name":"epidermoid carcinoma of the skin","type":"exact"},{"name":"epidermoid skin carcinoma","type":"exact"},{"name":"skin squamous cell cancer","type":"exact"},{"name":"skin squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma - skin","type":"exact"},{"name":"squamous cell carcinoma of skin","type":"exact"},{"name":"squamous cell carcinoma of the skin","type":"exact"},{"name":"squamous cell skin carcinoma","type":"exact"},{"name":"zone of skin squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002529","xrefs":{"Monarch":{"xref_id":"0002529"}}}


id: GO:0052849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 NADP+ + tetrahydrocurcumin = curcumin + 2 H+ + 2 NADPH.","definition_xrefs":["RHEA:34815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"curcumin reductase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN0-6676"],"synonyms":[{"name":"NADPH-dependent curcumin reductase activity","type":"exact"}],"termid":"GO:0052849"}


id: GO:0005900
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric receptor for the cytokine oncostatin-M (OSM). In humans the receptor complex is made up of the gene products gp130 and OSMR-beta.","definition_xrefs":["GOC:jl","PMID:8999038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"oncostatin-M receptor complex","termid":"GO:0005900"}


id: MONDO:1011264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy that occurs in dogs due to a mutation in ADAM9 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, ADAM9-related, dog","secondary_identifiers":["OMIA:001520-9615"],"synonyms":[{"name":"retinal atrophy - cone-rod dystrophy 3, dog","type":"related"}],"termid":"MONDO:1011264","xrefs":{"Monarch":{"xref_id":"1011264"}}}


id: MONDO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital fiber-type disproportion (obsolete MONDO:0000865)","termid":"MONDO:0000865","xrefs":{"Monarch":{"xref_id":"0000865"}}}


id: PBO:0090563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MADS-box Pvg4","termid":"PBO:0090563"}


id: MONDO:0012571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the NME8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 6","secondary_identifiers":["DOID:0110606","MEDGEN:370930","MESH:C567057","GARD:15502","OMIM:610852","UMLS:C1970506"],"synonyms":[{"name":"CILD6","type":"exact"},{"name":"NME8 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 6","type":"related"},{"name":"ciliary dyskinesia, primary, type 6","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in NME8","type":"exact"},{"name":"primary ciliary dyskinesia type 6","type":"exact"}],"termid":"MONDO:0012571","xrefs":{"Monarch":{"xref_id":"0012571"}}}


id: GO:0043578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear matrix organization","synonyms":[{"name":"nuclear matrix organisation","type":"exact"},{"name":"nuclear matrix organization and biogenesis","type":"related"},{"name":"nucleoskeleton organization","type":"exact"}],"termid":"GO:0043578"}


id: PBO:0040087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase G","termid":"PBO:0040087"}


id: MONDO:0021154
data:
  {"annotated_genes":["SJAG_03846","SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007145"},{"annotations":[87693,87694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"}]},"cv_name":"mondo","definition":"A disease that involves the dermis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic dermis disorder (obsolete MONDO:0019291)","termid":"MONDO:0019291"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_03846":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843083","Orphanet:79381","UMLS:C5681483"],"synonyms":[{"name":"dermis disease","type":"exact"},{"name":"dermis disease or disorder","type":"exact"},{"name":"disease of dermis","type":"exact"},{"name":"disease or disorder of dermis","type":"exact"},{"name":"disorder of dermis","type":"exact"},{"name":"other dermis disorder","type":"exact"}],"termid":"MONDO:0021154","terms_by_termid":{"MONDO:0007145":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0021154"}}}


id: FYPO:0007057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from recycling endosomes to the Golgi is abnormal.","definition_xrefs":["GO:0071955","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal recycling endosome to Golgi transport","synonyms":[{"name":"abnormal recycling endosome to Golgi transport during mitotic cell cycle","type":"related"},{"name":"abnormal recycling endosome to Golgi transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007057"}


id: GO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction organization","synonyms":[{"name":"cell junction assembly and maintenance","type":"exact"},{"name":"cell junction biogenesis","type":"related"},{"name":"cell junction organisation","type":"exact"}],"termid":"GO:0034330"}


id: GO:1903257
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72612,105422],"is_not":false,"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of selenoneine.","definition_xrefs":["GOC:TermGenie","PMID:24828577","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"modified histidine biosynthetic process","termid":"GO:0052703"},{"relation_name":"is_a","term_name":"selenoneine metabolic process","termid":"GO:1903256"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenoneine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-selenoneine biosynthetic process","type":"narrow"},{"name":"selenoneine anabolism","type":"exact"},{"name":"selenoneine biosynthesis","type":"exact"},{"name":"selenoneine formation","type":"exact"},{"name":"selenoneine synthesis","type":"exact"}],"termid":"GO:1903257","terms_by_termid":{"GO:1903257":null}}


id: MONDO:0800367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 1LL","secondary_identifiers":["MEDGEN:815619","UMLS:C3809289"],"synonyms":[{"name":"CMD1LL","type":"exact"}],"termid":"MONDO:0800367","xrefs":{"Monarch":{"xref_id":"0800367"}}}


id: PBO:0060069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 16","termid":"PBO:0060069"}


id: PBO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F5 divergent transcript","termid":"PBO:0045722"}


id: GO:1904755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of gut granule assembly","synonyms":[{"name":"regulation of gut granule biogenesis","type":"exact"},{"name":"regulation of gut granule formation","type":"exact"}],"termid":"GO:1904755"}


id: GO:0051864
data:
  {"annotated_genes":["SJAG_03286","SJAG_03664","SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72105,89154],"is_not":false,"summary":null,"term":"GO:0051864"},{"annotations":[68215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:16362057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03041":null,"SJAG_03286":null,"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0032452","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone H3K36 demethylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"[histone-H3]-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-K36 demethylase activity","type":"exact"},{"name":"histone H3-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine (H3-K36) demethylase activity","type":"exact"},{"name":"histone-lysine demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine(H3-K36) demethylase activity","type":"exact"}],"termid":"GO:0051864","terms_by_termid":{"GO:0051864":null,"GO:0140680":null}}


id: PBO:0045759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme like 1 pseudogene 3","termid":"PBO:0045759"}


id: PBO:0055215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2641","termid":"PBO:0055215"}


id: MONDO:1011523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, horse","secondary_identifiers":["OMIA:000437-9796"],"termid":"MONDO:1011523","xrefs":{"Monarch":{"xref_id":"1011523"}}}


id: MONDO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma of the ureter without spread to any other region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureter carcinoma","termid":"MONDO:0006481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"regional ureteric cancer","secondary_identifiers":["NCIT:C9356","MEDGEN:167733","UMLS:C0854921","DOID:14491"],"synonyms":[{"name":"regional malignant ureteral tumor","type":"exact"},{"name":"regional malignant ureteral tumour","type":"exact"},{"name":"regional ureter carcinoma","type":"exact"},{"name":"regional ureteric carcinoma","type":"exact"}],"termid":"MONDO:0001978","xrefs":{"Monarch":{"xref_id":"0001978"}}}


id: MONDO:0010103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth, fused","secondary_identifiers":["MESH:D005671","SCTID:1744008","UMLS:C0016873","OMIM:273000","MEDGEN:4808"],"synonyms":[{"name":"teeth, fused","type":"exact"}],"termid":"MONDO:0010103","xrefs":{"Monarch":{"xref_id":"0010103"}}}


id: MONDO:0030934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal dominant 64","secondary_identifiers":["UMLS:C5543067","GARD:16478","MEDGEN:1784554","OMIM:619188"],"synonyms":[{"name":"MRD64","type":"exact"},{"name":"ZNF292-related neurodevelopmental disorder","type":"exact"},{"name":"ZNF292-related syndrome","type":"broad"},{"name":"intellectual developmental disorder, autosomal dominant 64","type":"exact"},{"name":"mental retardation, autosomal dominant 64","type":"exact"}],"termid":"MONDO:0030934","xrefs":{"Monarch":{"xref_id":"0030934"}}}


id: GO:0103054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A12 + O2 + 2-oxoglutarate = gibberellin A15 + carbon dioxide + succinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A12, 2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A15-forming) (obsolete GO:0103054)","termid":"GO:0103054"}


id: PBO:0069550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 821, pseudogene","termid":"PBO:0069550"}


id: GO:0043096
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"Any process that generates purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleobase salvage","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"purine base salvage","type":"exact"}],"termid":"GO:0043096","terms_by_termid":{"GO:0006168":null}}


id: MONDO:0020593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign hair follicle neoplasm with trichoblastic differentiation. It usually presents as a solitary papular lesion It most often presents on the head and neck area, but it may develop in any anatomic site containing hair follicles. Because of its benign nature, treatment usually is not required, provided that the diagnosis has been established with certainty.","definition_xrefs":["NCIT:C27132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichoblastoma","secondary_identifiers":["ICDO:8100/0","icd11.foundation:1414797713","MEDGEN:138112","UMLS:C0349658"],"synonyms":[{"name":"Brooke's tumor","type":"exact"},{"name":"Brooke's tumour","type":"exact"},{"name":"trichoblastoma","type":"exact"},{"name":"trichoepithelioma","type":"exact"},{"name":"trichoepithelioma, benign","type":"exact"},{"name":"trichogenic adnexal tumor","type":"exact"},{"name":"trichogenic adnexal tumour","type":"exact"},{"name":"trichogenic trichoblastoma","type":"exact"}],"termid":"MONDO:0020593","xrefs":{"Monarch":{"xref_id":"0020593"}}}


id: MONDO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.","definition_xrefs":["NCIT:C2970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoid cystic carcinoma","secondary_identifiers":["DOID:0080202","EFO:0000231","ONCOTREE:ACYC","GARD:5743","MEDGEN:41382","UMLS:C0010606","icd11.foundation:2127202862","ICDO:8200/3","MESH:D003528"],"synonyms":[{"name":"adenocystic carcinoma","type":"exact"},{"name":"adenoid cystic cancer","type":"exact"},{"name":"adenoid cystic carcinoma","type":"exact"},{"name":"cribriform carcinoma","type":"related"},{"name":"cylindroid adenocarcinoma","type":"exact"},{"name":"cylindroma","type":"related"}],"termid":"MONDO:0004971","xrefs":{"Monarch":{"xref_id":"0004971"}}}


id: MONDO:0016566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loiasis is a form of filariasis (see this term), caused by the parasitic worm Loa loa, endemic to the forest and savannah regions of Central and Western Africa. Loiasis may either be asymptomatic or manifest as a large, transient area of localized, non-erythematous subcutaneous edema (Calabar swellings), adult worm migration through the sub-conjunctiva (''African eye worm'') and pruritus. Generalized itching, hives, muscle pains, arthralgias, fatigue, and adult worms visibly migrating under the surface of the skin may be observed. Severe complications such as encephalopathy have been reported in highly infected individuals receiving ivermectin during mass drug administration programs for the control of onchocerciasis and lymphatic filariasis.","definition_xrefs":["Orphanet:2404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loiasis","secondary_identifiers":["NCIT:C34784","ICD9:125.2","SCTID:44250009","UMLS:C0023968","MedDRA:10024797","GARD:3283","EFO:1000729","ICD10CM:B74.3","DOID:13523","icd11.foundation:709184369","MEDGEN:6132","MESH:D008118"],"synonyms":[{"name":"African eye worm","type":"related"},{"name":"Loa loa filariasis","type":"related"}],"termid":"MONDO:0016566","xrefs":{"Monarch":{"xref_id":"0016566"}}}


id: GO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after exiting the basilar pons through the medullary pyramid in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","PMID:9878731","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the medullary pyramid","synonyms":[{"name":"corticospinal neuron axon pathfinding through the medullary pyramid","type":"exact"}],"termid":"GO:0021971"}


id: GO:0045046
data:
  {"annotated_genes":["SJAG_03781","SJAG_04763","SJAG_03440"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92196,97210,113224],"is_not":false,"summary":null,"term":"GO:0045046"}]},"cv_name":"biological_process","definition":"The targeting of proteins into the peroxisomal membrane. The process is not well understood, but both signals and mechanism differ from those involved in peroxisomal matrix protein import.","definition_xrefs":["PMID:11687502","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"peroxisomal membrane transport","termid":"GO:0015919"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to peroxisome","termid":"GO:0072662"},{"relation_name":"is_a","term_name":"establishment of protein localization to peroxisome","termid":"GO:0072663"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03440":null,"SJAG_03781":null,"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0007031"],"is_obsolete":false,"name":"protein import into peroxisome membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9603798"],"synonyms":[{"name":"peroxisome membrane protein import","type":"exact"},{"name":"protein transport into peroxisome membrane","type":"exact"}],"termid":"GO:0045046","terms_by_termid":{"GO:0045046":null}}


id: GO:0051545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of elastin biosynthetic process (obsolete GO:0051545)","synonyms":[{"name":"down regulation of elastin biosynthetic process","type":"exact"},{"name":"down-regulation of elastin biosynthetic process","type":"exact"},{"name":"downregulation of elastin biosynthetic process","type":"exact"},{"name":"inhibition of elastin biosynthetic process","type":"narrow"}],"termid":"GO:0051545"}


id: PBO:0061059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase family member 2","termid":"PBO:0061059"}


id: PBO:0087169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C82","termid":"PBO:0087169"}


id: PBO:0049158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4","termid":"PBO:0049158"}


id: PBO:0083995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione synthetase; catalyzes the ATP-dependent synthesis of glutathione (GSH) from gamma-glutamylcysteine and glycine; induced by oxidative stress and heat shock","termid":"PBO:0083995"}


id: PBO:0065589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 5","termid":"PBO:0065589"}


id: MONDO:0014131
data:
  {"annotated_genes":["SJAG_03158"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87758],"is_not":false,"summary":null,"term":"MONDO:0014131"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"hypohidrosis-enamel hypoplasia-palmoplantar keratoderma-intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17562","OMIM:615328","Orphanet:363523","UMLS:C3809160","MEDGEN:815490"],"synonyms":[{"name":"SHAHEEN syndrome","type":"related"},{"name":"SHNS","type":"related"}],"termid":"MONDO:0014131","terms_by_termid":{"MONDO:0014131":null},"xrefs":{"Monarch":{"xref_id":"0014131"}}}


id: GO:1902380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of endoribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of endoribonuclease activity (obsolete GO:1902380)","synonyms":[{"name":"activation of endonuclease G activity","type":"related"},{"name":"activation of endoribonuclease activity","type":"narrow"},{"name":"positive regulation of endonuclease G activity","type":"related"},{"name":"up regulation of endonuclease G activity","type":"related"},{"name":"up regulation of endoribonuclease activity","type":"exact"},{"name":"up-regulation of endonuclease G activity","type":"related"},{"name":"up-regulation of endoribonuclease activity","type":"exact"},{"name":"upregulation of endonuclease G activity","type":"related"},{"name":"upregulation of endoribonuclease activity","type":"exact"}],"termid":"GO:1902380"}


id: GO:0004062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate.","definition_xrefs":["EC:2.8.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aryl sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-159358","RHEA:12164","Reactome:R-HSA-158849","Reactome:R-HSA-158468","Reactome:R-HSA-176646","Reactome:R-HSA-176585","Reactome:R-HSA-176474","MetaCyc:ARYL-SULFOTRANSFERASE-RXN","Reactome:R-HSA-158860"],"synonyms":[{"name":"1-naphthol phenol sulfotransferase activity","type":"related"},{"name":"2-naphtholsulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:phenol sulfotransferase activity","type":"related"},{"name":"4-nitrocatechol sulfokinase activity","type":"related"},{"name":"PST","type":"related"},{"name":"aryl sulphotransferase activity","type":"exact"},{"name":"arylsulfotransferase","type":"broad"},{"name":"dopamine sulfotransferase activity","type":"related"},{"name":"p-nitrophenol sulfotransferase activity","type":"related"},{"name":"phenol sulfokinase activity","type":"related"},{"name":"phenol sulfotransferase activity","type":"related"},{"name":"ritodrine sulfotransferase activity","type":"related"},{"name":"sulfokinase activity","type":"related"}],"termid":"GO:0004062"}


id: PBO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5","termid":"PBO:0060769"}


id: FYPO:0008019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing arginine as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:7903653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on arginine nitrogen source","synonyms":[{"name":"normal cell population growth on arginine nitrogen source","type":"exact"}],"termid":"FYPO:0008019"}


id: GO:0000096
data:
  {"annotated_genes":["SJAG_00881","SJAG_02972","SJAG_00582","SJAG_04459","SJAG_01404","SJAG_03152","SJAG_01466","SJAG_00309","SJAG_03614","SJAG_00395","SJAG_00832","SJAG_03712","SJAG_03141","SJAG_02689","SJAG_03856","SJAG_04305","SJAG_04425","SJAG_03102","SJAG_04042","SJAG_03494","SJAG_02293","SJAG_03659","SJAG_03556","SJAG_01880","SJAG_00988","SJAG_02290","SJAG_03881","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69863,62014,66699,112923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[112333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[67637,77835,60960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[100305,105392,95081,120035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006534"},{"annotations":[105421,113369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[80758,76238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050667"},{"annotations":[115774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[112334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[102459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[80053,59105,80912,81998,79498,78572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[100306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[113802,76237,72595,73536,80757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[112495,64018,114543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006555"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving amino acids containing sulfur, comprising cysteine, homocysteine, methionine and selenocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00395":null,"SJAG_00582":null,"SJAG_00832":null,"SJAG_00881":null,"SJAG_00988":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01880":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03494":null,"SJAG_03556":null,"SJAG_03614":null,"SJAG_03659":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03856":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04305":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sulfur amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1614635"],"synonyms":[{"name":"sulfur amino acid metabolism","type":"exact"},{"name":"sulphur amino acid metabolic process","type":"exact"},{"name":"sulphur amino acid metabolism","type":"exact"}],"termid":"GO:0000096","terms_by_termid":{"GO:0006534":null,"GO:0006535":null,"GO:0006555":null,"GO:0009086":null,"GO:0019280":null,"GO:0019284":null,"GO:0019344":null,"GO:0019450":null,"GO:0019509":null,"GO:0050667":null,"GO:0052699":null,"GO:0071266":null,"GO:0071269":null}}


id: PBO:0053446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 393","termid":"PBO:0053446"}


id: PR:O14031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pgt1 gene.","definition_xrefs":["UniProtKB:O14031","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.10c","synonyms":[{"name":"Spom972h-pgt1","type":"exact"}],"termid":"PR:O14031"}


id: PBO:0089140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp2","termid":"PBO:0089140"}


id: PBO:0066022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 3","termid":"PBO:0066022"}


id: GO:0008550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. An intrinsic activity of alpha-tubulin involved in tubulin folding, division plane formation in prokaryotic cells and others.","definition_xrefs":["MetaCyc:3.6.1.51-RXN","EC:3.6.5.6"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin GTPase activity (obsolete GO:0008550)","synonyms":[{"name":"tubulin GTPase activity","type":"exact"}],"termid":"GO:0008550"}


id: PBO:0113545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter that mediates zinc transport into vacuole; overexpression confers resistance to cobalt and rhodium; targeted to vacuole via AP-3 pathway; protein abundance increases in response to DNA replication stress; COT1 has a paralog, ZRC1, that arose from the whole genome duplication","termid":"PBO:0113545"}


id: MONDO:0003870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that arises from the brain stem and occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood astrocytic tumor","termid":"MONDO:0002505"},{"relation_name":"is_a","term_name":"brain stem astrocytic neoplasm","termid":"MONDO:0003173"},{"relation_name":"is_a","term_name":"childhood brain stem glioma","termid":"MONDO:0003869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood brainstem astrocytoma","secondary_identifiers":["NCIT:C6216","DOID:6386","UMLS:C1332950","MEDGEN:234123"],"synonyms":[{"name":"brain stem astrocytic neoplasm of childhood","type":"exact"},{"name":"childhood brain stem astrocytic neoplasm","type":"exact"},{"name":"childhood brain stem astrocytoma","type":"exact"},{"name":"childhood brainstem astrocytoma","type":"exact"},{"name":"paediatric brain stem astrocytic neoplasm","type":"exact"},{"name":"pediatric brain stem astrocytic neoplasm","type":"exact"}],"termid":"MONDO:0003870","xrefs":{"Monarch":{"xref_id":"0003870"}}}


id: MOD:01239
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-histidine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:10717661","PubMed:11327326","Unimod:53#H","PubMed:15133838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"histidine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01239"}


id: PBO:0066439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator 1","termid":"PBO:0066439"}


id: PATO:0005018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the midline of the jaw to the side opposite the midline.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesiodistally compressed","termid":"PATO:0005018"}


id: PBO:0062432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 94 pseudogene","termid":"PBO:0062432"}


id: MONDO:0100587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital disorder of glycosylation in which the cause of the disease is a mutation in A4GALT.","definition_xrefs":["PMID:30454869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"A4GALT-congenital disorder of glycosylation","synonyms":[{"name":"A4GALT-CDG","type":"exact"},{"name":"A4GALT-congenital disorder of glycosylation","type":"exact"},{"name":"A4GALT-related congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100587","xrefs":{"Monarch":{"xref_id":"0100587"}}}


id: GO:0075203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont penetration hypha formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of penetration hypha formation","termid":"GO:0075202"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"positively_regulates","term_name":"penetration hypha formation","termid":"GO:0075201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penetration hypha formation","synonyms":[{"name":"positive regulation of symbiont penetration hypha formation for entry into host","type":"exact"}],"termid":"GO:0075203"}


id: FYPO:0005167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere inner repeat regions is decreased.","definition_xrefs":["PMID:12925774","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at centromere inner repeat","synonyms":[{"name":"decreased protein localisation to chromatin at centromere inner repeat","type":"exact"},{"name":"decreased protein localization to chromatin at centromere imr","type":"exact"},{"name":"decreased protein localization to chromatin at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at centromere inner repeat","type":"exact"}],"termid":"FYPO:0005167"}


id: PR:Q10280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gaf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor gaf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.01","synonyms":[{"name":"Gaf-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gaf1","type":"exact"}],"termid":"PR:Q10280"}


id: MONDO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common type of colorectal carcinoma. It is characterized by the presence of malignant glandular epithelial cells invading through the muscularis mucosa into the submucosa. Histologic variants include mucinous adenocarcinoma, signet ring cell carcinoma, medullary carcinoma, serrated adenocarcinoma, cribriform comedo-type adenocarcinoma, and micropapillary adenocarcinoma.","definition_xrefs":["NCIT:C5105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"colorectal carcinoma","termid":"MONDO:0024331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal adenocarcinoma","secondary_identifiers":["SCTID:269533000","DOID:0050861","EFO:0000365","ONCOTREE:COADREAD","MEDGEN:230816","SCTID:408645001","DOID:0050913","UMLS:C1319315"],"synonyms":[{"name":"adenocarcinoma of large bowel","type":"exact"},{"name":"adenocarcinoma of large intestine","type":"exact"},{"name":"adenocarcinoma of the large bowel","type":"exact"},{"name":"adenocarcinoma of the large intestine","type":"exact"},{"name":"colorectal (colon or rectal) adenocarcinoma","type":"exact"},{"name":"colorectal adenocarcinoma","type":"exact"},{"name":"colorectum adenocarcinoma","type":"exact"},{"name":"large bowel adenocarcinoma","type":"exact"},{"name":"large intestine adenocarcinoma","type":"exact"}],"termid":"MONDO:0005008","xrefs":{"Monarch":{"xref_id":"0005008"}}}


id: GO:0042219
data:
  {"annotated_genes":["SJAG_02100","SJAG_00903","SJAG_03316","SJAG_04858","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75443,80264,78323,104054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"},{"annotations":[76031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of compounds derived from amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01612":null,"SJAG_02100":null,"SJAG_03316":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modified amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid derivative catabolic process","type":"exact"},{"name":"cellular amino acid derivative breakdown","type":"exact"},{"name":"cellular amino acid derivative catabolic process","type":"exact"},{"name":"cellular amino acid derivative catabolism","type":"exact"},{"name":"cellular amino acid derivative degradation","type":"exact"},{"name":"cellular modified amino acid breakdown","type":"exact"},{"name":"cellular modified amino acid catabolic process","type":"exact"},{"name":"cellular modified amino acid catabolism","type":"exact"},{"name":"cellular modified amino acid degradation","type":"exact"},{"name":"modified amino acid catabolism","type":"exact"}],"termid":"GO:0042219","terms_by_termid":{"GO:0006660":null,"GO:0006751":null}}


id: MONDO:1011696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatocytosis and gastrits, non-human animal","secondary_identifiers":["OMIA:001178"],"termid":"MONDO:1011696","xrefs":{"Monarch":{"xref_id":"1011696"}}}


id: PBO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious","termid":"PBO:0000223"}


id: PATO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000361 gel consistency value (obsolete PATO:0000361)","termid":"PATO:0000361"}


id: PBO:0057366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ai","termid":"PBO:0057366"}


id: GO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1.","definition_xrefs":["PMID:20018852","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NSL complex","synonyms":[{"name":"non-specific lethal complex","type":"exact"}],"termid":"GO:0044545"}


id: PBO:0057856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3167","termid":"PBO:0057856"}


id: PBO:0060509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAPA antisense RNA 1","termid":"PBO:0060509"}


id: PBO:0043899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 3","termid":"PBO:0043899"}


id: PBO:0070469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 4","termid":"PBO:0070469"}


id: MONDO:0004075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor, composed of lobules of mature adipocytes, that penetrates the surrounding tissue from which it arises. There is usually a higher local recurrence rate when compared with non-infiltrating lipomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infiltrating lipoma","secondary_identifiers":["DOID:7014","UMLS:C0334473","NCIT:C7450","MEDGEN:90788","NCIT:C7451"],"synonyms":[{"name":"intramuscular lipoma","type":"exact"},{"name":"intramuscular lipoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004075","xrefs":{"Monarch":{"xref_id":"0004075"}}}


id: MOD:00755
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an iodine atom of a residue for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodinated residue","synonyms":[{"name":"IRes","type":"exact"}],"termid":"MOD:00755"}


id: PBO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 10B","termid":"PBO:0047420"}


id: PBO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose Insensitive Transcription","termid":"PBO:0001589"}


id: PBO:0066548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 11","termid":"PBO:0066548"}


id: PBO:0050243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 21","termid":"PBO:0050243"}


id: PBO:0064934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPT2-EGFL8 readthrough (NMD candidate)","termid":"PBO:0064934"}


id: FYPO:0008384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin localization at the nuclear periphery is decreased.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome region phenotype during vegetative growth","termid":"FYPO:0008382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased localization of chromatin region to nuclear periphery during vegetative growth","termid":"FYPO:0008384"}


id: PBO:0004646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase (predicted)","termid":"PBO:0004646"}


id: PBO:0053977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1289","termid":"PBO:0053977"}


id: PBO:0063458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor subunit A","termid":"PBO:0063458"}


id: GO:1901767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbapenem.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:9402024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem metabolic process","synonyms":[{"name":"carbapenem metabolism","type":"exact"}],"termid":"GO:1901767"}


id: GO:0015591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-ribose from one side of a membrane to the other. As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transporter activity","termid":"GO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"D-ribose transmembrane transporter activity","termid":"GO:0015591"}


id: PBO:0044456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 35, pseudogene","termid":"PBO:0044456"}


id: SO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TATA box core promoter of a gene transcribed by RNA polymerase II.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TATA_box","termid":"SO:0000174"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_polymerase_II_TATA_box","synonyms":[{"name":"RNA polymerase II TATA box","type":"exact"}],"termid":"SO:0001661"}


id: GO:0039516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host enzyme activity.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host catalytic activity (obsolete GO:0039516)","synonyms":[{"name":"modulation of catalytic activity of host by virus","type":"exact"},{"name":"regulation by virus of host catalytic activity","type":"exact"},{"name":"regulation of host catalytic activity by virus","type":"exact"}],"termid":"GO:0039516"}


id: GO:0008053
data:
  {"annotated_genes":["SJAG_02656","SJAG_01357","SJAG_02265","SJAG_00031","SJAG_00855","SJAG_00304"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93714,97877],"is_not":false,"summary":null,"term":"GO:0008053"},{"annotations":[106712],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990627"},{"annotations":[106457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990626"},{"annotations":[108265,103841],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010637"}]},"cv_name":"biological_process","definition":"Merging of two or more mitochondria within a cell to form a single compartment.","definition_xrefs":["PMID:12052774","PMID:11038192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00304":null,"SJAG_00855":null,"SJAG_01357":null,"SJAG_02265":null,"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"mitochondrial fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990613"],"synonyms":[{"name":"mitochondrial membrane fusion","type":"related"},{"name":"mitochondrion fusion","type":"exact"}],"termid":"GO:0008053","terms_by_termid":{"GO:0008053":null,"GO:0010637":null,"GO:1990626":null,"GO:1990627":null}}


id: GO:0031299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + taurine = L-alanine + sulfoacetaldehyde.","definition_xrefs":["PMID:11082195","RHEA:10420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"taurine-pyruvate aminotransferase activity","secondary_identifiers":["MetaCyc:TAURINE-AMINOTRANSFERASE-RXN","EC:2.6.1.77","KEGG_REACTION:R05652"],"synonyms":[{"name":"Tpa","type":"related"},{"name":"taurine:pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0031299"}


id: PBO:0018078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot15 (predicted)","termid":"PBO:0018078"}


id: GO:0044476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts the activity of a low voltage-gated calcium channel in another organism via the action of a venom.","definition_xrefs":["PMID:20920515","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated inhibition of voltage-gated calcium channel activity","termid":"GO:0044474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated inhibition of low voltage-gated calcium channel activity","synonyms":[{"name":"envenomation resulting in negative regulation of low voltage-gated calcium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044476"}


id: PBO:0078398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 8-1","termid":"PBO:0078398"}


id: PBO:0043690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I2","termid":"PBO:0043690"}


id: PATO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000489 vigorous response (obsolete PATO:0000489)","termid":"PATO:0000489"}


id: FYPO:0000624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which any process of negative regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal negative regulation of transcription during vegetative growth","synonyms":[{"name":"abnormal down regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal down regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal down-regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal down-regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal downregulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal downregulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal inhibition of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal inhibition of transcription, DNA-dependent, during vegetative growth","type":"narrow"},{"name":"abnormal negative regulation of cellular transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal negative regulation of transcription during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"}],"termid":"FYPO:0000624"}


id: MONDO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the uvula.","definition_xrefs":["NCIT:C128385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uvulitis","secondary_identifiers":["DOID:0060310","icd11.foundation:776797866","ICD9:528.3","SCTID:300932000","UMLS:C0042174","MedDRA:10051962","MEDGEN:508266"],"synonyms":[{"name":"acute uvulitis","type":"narrow"},{"name":"inflammation of palatine uvula","type":"exact"},{"name":"palatine uvula inflammation","type":"exact"}],"termid":"MONDO:0000739","xrefs":{"Monarch":{"xref_id":"0000739"}}}


id: GO:1901432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to cycloalkane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to cycloalkane","termid":"GO:1901431"},{"relation_name":"negatively_regulates","term_name":"response to cycloalkane","termid":"GO:0014071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to cycloalkane","synonyms":[{"name":"down regulation of response to cycloalkane","type":"exact"},{"name":"down-regulation of response to cycloalkane","type":"exact"},{"name":"downregulation of response to cycloalkane","type":"exact"},{"name":"inhibition of response to cycloalkane","type":"narrow"}],"termid":"GO:1901432"}


id: PBO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5DC1 pseudogene 2","termid":"PBO:0061559"}


id: PBO:0058895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12113","termid":"PBO:0058895"}


id: GO:0110015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of elastin catabolism, the chemical reactions and pathways resulting in the breakdown of elastin.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of elastin catabolic process","termid":"GO:0060310"},{"relation_name":"is_a","term_name":"positive regulation of glycoprotein metabolic process","termid":"GO:1903020"},{"relation_name":"positively_regulates","term_name":"elastin catabolic process","termid":"GO:0060309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of elastin catabolic process","termid":"GO:0110015"}


id: GO:0060746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive behavior in which a parent cares for and rears offspring.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive behavior","termid":"GO:0019098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parental behavior","termid":"GO:0060746"}


id: GO:0102352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a 1,2-diacyl-sn-glycerol 3-phosphate = ADP + a 1,2-diacyl-sn-glycerol 3-diphosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidate kinase activity (obsolete GO:0102352)","termid":"GO:0102352"}


id: PBO:0117145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNRC18 antisense RNA 1","termid":"PBO:0117145"}


id: PBO:0078899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-3","termid":"PBO:0078899"}


id: GO:0141179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids the effects of recognition by a host  antimicrobial peptide by altering molecules on the symbiont surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11401964","PMID:22966934","PMID:25537831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of recognition by host antimicrobial peptide","termid":"GO:0141179"}


id: GO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric glomerular parietal epithelial cell over time, from its formation to the mature structure. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell development","termid":"GO:0061251"},{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell development","termid":"GO:0072016"},{"relation_name":"part_of","term_name":"mesonephric glomerular parietal epithelial cell differentiation","termid":"GO:0061253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular parietal epithelial cell development","termid":"GO:0061254"}


id: PBO:0060541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 1","termid":"PBO:0060541"}


id: MOD:00037
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine  residue to one of the diastereomeric 5-hydroxy-L-lysine  residues.","definition_xrefs":["PubMed:18688235","ChEBI:60175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated lysine","termid":"MOD:01047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-L-lysine","synonyms":[{"name":"5-hydroxylated L-lysine","type":"exact"},{"name":"5HyLys","type":"exact"}],"termid":"MOD:00037"}


id: GO:0018663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dihydroxypyridine + H+ + NADH + O2 = 2,3,6-trihydroxypyridine + H2O + NAD+.","definition_xrefs":["RHEA:16917","EC:1.14.13.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,6-dihydroxypyridine 3-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04130","MetaCyc:1.14.13.10-RXN","UM-BBD_reactionID:r0479"],"synonyms":[{"name":"2,6-dihydroxypyridine oxidase activity","type":"exact"},{"name":"2,6-dihydroxypyridine,NADH:oxygen oxidoreductase (3-hydroxylating)","type":"related"}],"termid":"GO:0018663"}


id: MONDO:0858991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 86 (obsolete MONDO:0858991)","termid":"MONDO:0858991","xrefs":{"Monarch":{"xref_id":"0858991"}}}


id: PBO:0004829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs65 (predicted)","termid":"PBO:0004829"}


id: PBO:0085122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; forms a complex with Noc4p that mediates maturation and nuclear export of 40S ribosomal subunits; also present in the small subunit processome complex, which is required for processing of pre-18S rRNA","termid":"PBO:0085122"}


id: PATO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being moved or displaced to one side so as to make lateral.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateralized","termid":"PATO:0000626"}


id: RO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_ends","termid":"RO:0002084"}


id: GO:0010976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"positively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron projection development","synonyms":[{"name":"positive regulation of neurite biosynthesis","type":"narrow"},{"name":"positive regulation of neurite development","type":"narrow"},{"name":"positive regulation of neurite formation","type":"narrow"},{"name":"positive regulation of neurite growth","type":"narrow"}],"termid":"GO:0010976"}


id: FYPO:0003961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phospholipid:diacylglycerol acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal phospholipid:diacylglycerol acyltransferase activity","synonyms":[{"name":"abnormal PDAT activity","type":"exact"}],"termid":"FYPO:0003961"}


id: GO:1905718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:11007487"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic spindle astral microtubule end (obsolete GO:1905718)","synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905718"}


id: MONDO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Annular atrophic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by both annular and atrophic LP features in the same lesion.","definition_xrefs":["Orphanet:254411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"annular atrophic lichen planus","secondary_identifiers":["MEDGEN:929706","GARD:12676","SCTID:720493003","UMLS:C4304037"],"synonyms":[{"name":"annular atrophic LP","type":"exact"}],"termid":"MONDO:0016771","xrefs":{"Monarch":{"xref_id":"0016771"}}}


id: FYPO:0006456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abolished during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle during meiosis II","synonyms":[{"name":"abolished protein localisation to meiotic spindle during meiosis II","type":"exact"},{"name":"abolished protein localization to meiosis II spindle","type":"exact"},{"name":"abolished protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during meiosis II","type":"exact"},{"name":"protein localization to meiotic spindle abolished during meiosis II","type":"exact"}],"termid":"FYPO:0006456"}


id: PBO:0078582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 55","termid":"PBO:0078582"}


id: PBO:0044093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A1","termid":"PBO:0044093"}


id: PATO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000278 hybrid fertility (obsolete PATO:0000278)","termid":"PATO:0000278"}


id: MONDO:0017415
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88900,88901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[88925,88926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"multiple pterygium syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080110","GARD:21177","MEDGEN:1852087","MESH:C537377","ICD9:755.8","icd11.foundation:834369371","UMLS:C5848053","NORD:1632","Orphanet:294060","SCTID:205819008"],"synonyms":[{"name":"Pterygium Syndrome, Multiple","type":"exact"},{"name":"pterygium syndrome","type":"related"}],"termid":"MONDO:0017415","terms_by_termid":{"MONDO:0008338":null,"MONDO:0020746":null},"xrefs":{"Monarch":{"xref_id":"0017415"}}}


id: PBO:0052342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 1C","termid":"PBO:0052342"}


id: FYPO:0003446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of SRP-dependent cotranslational protein targeting to the ER membrane is decreased.","definition_xrefs":["GO:0006614","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal protein secretion during vegetative growth","termid":"FYPO:0000536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased SRP-dependent cotranslational protein targeting to membrane during vegetative growth","synonyms":[{"name":"decreased SRP-dependent cotranslational protein targeting to membrane during mitotic cell cycle","type":"related"},{"name":"reduced SRP-dependent cotranslational protein targeting to membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0003446"}


id: MONDO:0023113
data:
  {"annotated_genes":["SJAG_02226","SJAG_01620","SJAG_02187","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[86925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87387,87388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"Familial colon cancer is a cluster of colon cancer within a family. Most cases of colon cancer occur sporadically in people with little to no family history of the condition. Approximately 3-5% of colon cancer is considered 'hereditary' and is thought to be caused by an inherited predisposition tocolon cancer that is passed down through a family in an autosomal dominant or autosomal recessive manner. In some of these families, the underlying genetic cause is not known; however, many of these cases are caused by changes (mutations) in the APC , MYH , MLH1 , MSH2 , MSH6 , PMS2 , EPCAM , PTEN , STK11 , SMAD4 , BMPR1A , NTHL1 , POLE , and POLD1 genes (which are associated with hereditary cancer syndromes). An additional 10-30% of people diagnosed with colon cancer have a significant family history of the condition but have no identifiable mutation in a gene known to cause a hereditary predisposition to colon cancer. These clusters of colon cancer are likely due to a combination of gene(s) and other shared factors such as environment and lifestyle. High-risk cancer screening and other preventative measures such as prophylactic surgeries are typically recommended in people who have an increased risk for colon cancer based on their personal and/or family histories.","definition_xrefs":["GARD:0008533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"colorectal cancer","termid":"MONDO:0005575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"familial colorectal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8533"],"synonyms":[{"name":"colorectal cancer, familial","type":"related"},{"name":"hereditary colorectal cancer","type":"exact"}],"termid":"MONDO:0023113","terms_by_termid":{"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0023113"}}}


id: PBO:0064695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 31","termid":"PBO:0064695"}


id: GO:0010832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"negatively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myotube differentiation","termid":"GO:0010832"}


id: FYPO:0005706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is longer than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["PomBase:mah","GO:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic anaphase","termid":"FYPO:0000618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic anaphase B","synonyms":[{"name":"delayed mitotic anaphase B progression","type":"related"},{"name":"increased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"increased duration of mitotic anaphase B progression","type":"exact"},{"name":"prolonged mitotic anaphase B","type":"exact"}],"termid":"FYPO:0005706"}


id: PBO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 31, pseudogene","termid":"PBO:0044452"}


id: PBO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_35S_rRNA_precursor_level","termid":"PBO:0030668"}


id: PBO:0086568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YOR029W is not an essential gene","termid":"PBO:0086568"}


id: PBO:0058900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12118","termid":"PBO:0058900"}


id: GO:0030582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a reproductive fruiting body over time, from its formation to the mature structure. A reproductive fruiting body is a multicellular reproductive structure that contains spores.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive fruiting body development","synonyms":[{"name":"fruiting body formation","type":"exact"}],"termid":"GO:0030582"}


id: MONDO:0012130
data:
  {"annotated_genes":["SJAG_04567","SJAG_02919","SJAG_03815"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87947,87948,87949],"is_not":false,"summary":null,"term":"MONDO:0012130"}]},"cv_name":"mondo","definition":"Any autosomal dominant distal myopathy in which the cause of the disease is a mutation in the CRYAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336"],"is_obsolete":false,"name":"myofibrillar myopathy 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:324735","MESH:C563848","OMIM:608810","DOID:0080093","GARD:17651","Orphanet:399058","UMLS:C1837317"],"synonyms":[{"name":"CRYAB autosomal dominant distal myopathy","type":"exact"},{"name":"MFM2","type":"related"},{"name":"alpha-B crystallin-related late-onset distal myopathy","type":"related"},{"name":"alpha-B crystallinopathy","type":"exact"},{"name":"autosomal dominant distal myopathy caused by mutation in CRYAB","type":"exact"},{"name":"late-onset distal crystallinopathy","type":"exact"},{"name":"myofibrillar myopathy type 2","type":"exact"},{"name":"myopathy, desmin-related, associated with mutation in the Cryab Gene","type":"related"},{"name":"myopathy, myofibrillar, 2","type":"related"},{"name":"myopathy, myofibrillar, alpha-B crystallin-related","type":"related"},{"name":"myopathy, myofibrillar, type 2","type":"exact"},{"name":"myopathy, myofibrillar, with or without cataract and/or cardiomyopathy","type":"related"}],"termid":"MONDO:0012130","terms_by_termid":{"MONDO:0012130":null},"xrefs":{"Monarch":{"xref_id":"0012130"}}}


id: PR:O13827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19A8.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19A8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.11c","synonyms":[{"name":"Spom972h-SPAC19A8.11c","type":"exact"}],"termid":"PR:O13827"}


id: PBO:0060689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 4","termid":"PBO:0060689"}


id: RO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are worsened by the presence of the entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_exacerbated_by","termid":"RO:0003311"}


id: GO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a hemidesmosome.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of hemidesmosome (obsolete GO:0061465)","termid":"GO:0061465"}


id: PBO:0076490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 5","termid":"PBO:0076490"}


id: MONDO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, circumscribed proliferation of melanocytes in the skin. Variants include the Spitz nevus, halo nevus, blue nevus, and balloon cell nevus.","definition_xrefs":["NCIT:C7571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign melanocytic skin nevus","secondary_identifiers":["UMLS:C1456781","MEDGEN:264151"],"synonyms":[{"name":"benign melanocytic nevus","type":"exact"},{"name":"benign melanocytic nevus of skin","type":"exact"},{"name":"benign melanocytic nevus of the skin","type":"exact"},{"name":"benign melanocytic skin nevus","type":"exact"},{"name":"benign mole","type":"exact"},{"name":"benign nevus of skin","type":"exact"},{"name":"benign nevus of the skin","type":"exact"},{"name":"benign skin nevus","type":"exact"}],"termid":"MONDO:0044794","xrefs":{"Monarch":{"xref_id":"0044794"}}}


id: GO:1902532
data:
  {"annotated_genes":["SJAG_03353","SJAG_02514","SJAG_02451","SJAG_02000","SJAG_03486","SJAG_04943","SJAG_04462","SJAG_02013","SJAG_00526","SJAG_03592","SJAG_03681","SJAG_00293","SJAG_03678","SJAG_04206","SJAG_03072","SJAG_03893","SJAG_00975","SJAG_02169","SJAG_00883","SJAG_02233","SJAG_05346","SJAG_01679","SJAG_00229","SJAG_01142","SJAG_00169","SJAG_01386","SJAG_01253","SJAG_01184","SJAG_03126","SJAG_00824","SJAG_04455","SJAG_01297","SJAG_04259","SJAG_00875","SJAG_05000","SJAG_00991","SJAG_02392","SJAG_00642","SJAG_02389","SJAG_00457","SJAG_01114","SJAG_03508","SJAG_03974","SJAG_02858","SJAG_02379","SJAG_04522","SJAG_03185","SJAG_01464","SJAG_03089","SJAG_02765","SJAG_06270","SJAG_00209","SJAG_03501","SJAG_04910","SJAG_03355","SJAG_02231","SJAG_02336","SJAG_03799","SJAG_00289","SJAG_03263","SJAG_01983","SJAG_04249","SJAG_04825","SJAG_01790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117741,116110,101373,110070,105688,109043,113792,92492,115622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[102786,117968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[101222,120182,108856,105596,109423,97632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[95972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[96815,93440,101224,118927,97754,120183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[108949,89973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[74008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[73225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[93508,97419,101375,94616,109354,106847,95230,109044,92496,117744,108911,111993,94701,74589,103065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[93011,107702,113544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[74852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[75231,106937,103249,104810,117969,108961,119893,89788,81620,111090,95101,62840,97881,116416,114996,75338,111497,115814,118890,100660,120086,101357,118326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[118115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intracellular signal transduction.","definition_xrefs":["GOC:tb","GOC:TermGenie","GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"negatively_regulates","term_name":"intracellular signal 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intracellular signal transduction","type":"narrow"},{"name":"inhibition of intracellular signal transduction pathway","type":"narrow"},{"name":"inhibition of intracellular signaling cascade","type":"narrow"},{"name":"inhibition of intracellular signaling chain","type":"narrow"},{"name":"inhibition of intracellular signaling pathway","type":"related"},{"name":"inhibition of signal transduction via intracellular signaling cascade","type":"related"},{"name":"inhibition of signal transmission via intracellular cascade","type":"narrow"},{"name":"negative regulation of intracellular protein kinase cascade","type":"exact"},{"name":"negative regulation of intracellular signal transduction pathway","type":"narrow"},{"name":"negative regulation of intracellular signaling cascade","type":"exact"},{"name":"negative regulation of intracellular signaling chain","type":"exact"},{"name":"negative regulation of intracellular signaling pathway","type":"related"},{"name":"negative regulation of signal transduction via intracellular signaling cascade","type":"related"},{"name":"negative regulation of signal transmission via intracellular cascade","type":"narrow"}],"termid":"GO:1902532","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0035024":null,"GO:0046580":null,"GO:0106057":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: PBO:0053645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 693","termid":"PBO:0053645"}


id: GO:0000165
data:
  {"annotated_genes":["SJAG_04551","SJAG_02878","SJAG_03625","SJAG_00027","SJAG_03893","SJAG_06621","SJAG_01787","SJAG_04522","SJAG_02392","SJAG_01181","SJAG_02342","SJAG_03903","SJAG_04503","SJAG_01978","SJAG_03705","SJAG_03828","SJAG_01885","SJAG_02592","SJAG_04777","SJAG_03185","SJAG_04666","SJAG_00993","SJAG_01114","SJAG_03969","SJAG_00610","SJAG_01587","SJAG_02135","SJAG_06592","SJAG_00117","SJAG_02013","SJAG_02486","SJAG_00845","SJAG_03263","SJAG_02233","SJAG_03340","SJAG_00975","SJAG_04825","SJAG_02945","SJAG_03753","SJAG_03384","SJAG_01199","SJAG_06622","SJAG_03453","SJAG_00318","SJAG_00424","SJAG_05000","SJAG_02000","SJAG_01718","SJAG_02923","SJAG_00990","SJAG_01345","SJAG_02183","SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57361,101760],"is_not":false,"summary":null,"term":"GO:0000165"},{"annotations":[103936,66198,112807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[108085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007254"},{"annotations":[108856,105596,97632,101222,109423,120182],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[120183,96815,93440,101224,97754,118927],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903753"},{"annotations":[89973,108949],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0180040"},{"annotations":[74812,59333,103551,71748,108086,96145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038066"},{"annotations":[98165,65770,98825,108087,91006,95096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071507"},{"annotations":[89850,91210,92538,119756,94190,69340],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903139"},{"annotations":[120146,110759,110761,110764,110760,119219,113651,114317,97040,110758,110762,110763],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900745"},{"annotations":[116463,105498,117431,89909,92617],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0062038"},{"annotations":[76405,82124],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043408"}]},"cv_name":"biological_process","definition":"An intracellular protein kinase cascade containing at least a MAP kinase (MAPK). 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id: PBO:0053107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0053107"}


id: PBO:0040281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP1A1 antisense RNA 1","termid":"PBO:0040281"}


id: MOD:01371
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE bcecause identical and redundant with MOD:00851. Remap to MOD:00851.","definition_xrefs":["PubMed:8382902"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01371 deamidation in presence of O18 (obsolete MOD:01371)","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"}],"termid":"MOD:01371"}


id: GO:0120210
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Rod telodendria are projections that originate from the rod pedicle and form gap junctions with other photoreceptors within the outer plexiform layer of the retina.","definition_xrefs":["GOC:cvs","PMID:14755521","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telodendria","termid":"GO:0120208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod telodendria","termid":"GO:0120210"}


id: MONDO:1010007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subvalvular aortic stenosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subvalvular aortic stenosis, non-human animal","secondary_identifiers":["OMIA:000052"],"termid":"MONDO:1010007","xrefs":{"Monarch":{"xref_id":"1010007"}}}


id: GO:0004617
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65915],"is_not":false,"summary":null,"term":"GO:0004617"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphoglycerate + NAD+ = 3-phosphohydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:12641","Reactome:R-HSA-977348","MetaCyc:PGLYCDEHYDROG-RXN"],"synonyms":[{"name":"3-phospho-D-glycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"3-phosphoglycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglyceric acid dehydrogenase activity","type":"related"},{"name":"3PHP reductase activity","type":"related"},{"name":"D- and L-HGA","type":"related"},{"name":"D-3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"D-3-phosphoglycerate:NAD+ oxidoreductase activity","type":"related"},{"name":"PGDH activity","type":"related"},{"name":"SerA","type":"related"},{"name":"SerA 3PG dehydrogenase activity","type":"related"},{"name":"alpha-KG reductase activity","type":"related"},{"name":"alpha-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"alphaKG reductase activity","type":"related"},{"name":"glycerate 3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerate-1,3-phosphate dehydrogenase activity","type":"related"},{"name":"phosphoglycerate oxidoreductase activity","type":"related"},{"name":"phosphoglyceric acid dehydrogenase activity","type":"related"}],"termid":"GO:0004617","terms_by_termid":{"GO:0004617":null}}


id: PBO:0062387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 7 pseudogene","termid":"PBO:0062387"}


id: GO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosterone","synonyms":[{"name":"response to corticosterone stimulus","type":"exact"}],"termid":"GO:0051412"}


id: GO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a secondary alveolar septum over time, from its formation to the mature structure. A secondary alveolar septum is a specialized epithelium that subdivides the initial saccule.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lung saccule development","termid":"GO:0060430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alveolar secondary septum development","termid":"GO:0061144"}


id: GO:1901121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tobramycin.","definition_xrefs":["UniPathway:UPA00971","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"tobramycin metabolic process","termid":"GO:1901119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tobramycin biosynthetic process","synonyms":[{"name":"tobramycin anabolism","type":"exact"},{"name":"tobramycin biosynthesis","type":"exact"},{"name":"tobramycin formation","type":"exact"},{"name":"tobramycin synthesis","type":"exact"}],"termid":"GO:1901121"}


id: GO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C3d product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component C3d receptor activity","termid":"GO:0001860"}


id: MONDO:0013179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, complex form of hereditary spastic paraplegia characterized by a late-onset, slowly progressive spastic paraplegia associated with mild ataxia and dysarthria, upper extremity involvement (i.e. loss of finger dexterity, dysmetria), and mild cognitive impairment, without the presence of nystagmus. A hypomyelinating leukodystrophy and thin corpus callosum is observed in all cases and psychomotor development is normal or near normal. SPG44 is caused by mutations in the GJC2 gene (1q41-q42) encoding the gap junction gamma-2 protein.","definition_xrefs":["Orphanet:320401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 44","secondary_identifiers":["OMIM:613206","MEDGEN:413042","UMLS:C2750784","DOID:0110796","MESH:C567707","GARD:17478","SCTID:723821002"],"synonyms":[{"name":"GJC2 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG44","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in GJC2","type":"exact"},{"name":"autosomal recessive spastic paraplegia 44","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 44","type":"related"},{"name":"hereditary spastic paraplegia type 44","type":"exact"},{"name":"spastic paraplegia 44, autosomal recessive","type":"related"}],"termid":"MONDO:0013179","xrefs":{"Monarch":{"xref_id":"0013179"}}}


id: MONDO:0015191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"myopathic intestinal pseudoobstruction","secondary_identifiers":["GARD:19853","MEDGEN:1843444","icd11.foundation:1007742014","Orphanet:104077","UMLS:C5681739"],"termid":"MONDO:0015191","xrefs":{"Monarch":{"xref_id":"0015191"}}}


id: PBO:0081680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 601, pseudogene","termid":"PBO:0081680"}


id: PBO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 1","termid":"PBO:0061931"}


id: GO:0035276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ethanol, CH(3)-CH(2)-OH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ethanol binding","termid":"GO:0035276"}


id: MONDO:0010040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and intellectual disability","secondary_identifiers":["UMLS:C3151619","MEDGEN:462969","OMIM:270500"],"synonyms":[{"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and intellectual disability","type":"exact"},{"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and mental retardation","type":"exact"}],"termid":"MONDO:0010040","xrefs":{"Monarch":{"xref_id":"0010040"}}}


id: MONDO:0035863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome-intellectual disability (obsolete MONDO:0035863)","secondary_identifiers":["Orphanet:611327"],"termid":"MONDO:0035863","xrefs":{"Monarch":{"xref_id":"0035863"}}}


id: GO:0160174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular developmental process by which the outer layer of the cell (the cortex) rotates relative to the inner cytoplasm.","definition_xrefs":["PMID:37983969","PMID:22949618","PMID:25077289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cortical rotation","termid":"GO:0160174"}


id: MONDO:0014274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"L-ferritin deficiency","secondary_identifiers":["GARD:17748","OMIM:615604","Orphanet:440731","UMLS:C3810090","MEDGEN:816420"],"synonyms":[{"name":"L-ferritin deficiency","type":"exact"},{"name":"L-ferritin deficiency, dominant and recessive","type":"exact"},{"name":"LFTD","type":"related"}],"termid":"MONDO:0014274","xrefs":{"Monarch":{"xref_id":"0014274"}}}


id: GO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase II basal transcription factor binding (obsolete GO:0001083)","synonyms":[{"name":"RNA polymerase II basal transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001083"}


id: MONDO:0020275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Albinism that affects the eyes, including ocular albinism and oculocutaneous albinism.","definition_xrefs":["Wikipedia:Albinism"],"gene_count":0,"genotype_count":0,"name":"obsolete oculocutaneous or ocular albinism (obsolete MONDO:0020275)","secondary_identifiers":["Orphanet:98706"],"termid":"MONDO:0020275","xrefs":{"Monarch":{"xref_id":"0020275"}}}


id: PBO:0058844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8073","termid":"PBO:0058844"}


id: PBO:0069138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 389, pseudogene","termid":"PBO:0069138"}


id: PBO:0084736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms a complex with Tim13p that delivers a subset of hydrophobic proteins to the TIM22 complex for inner membrane insertion; homolog of human TIMM8A, implicated in Mohr-Tranebjaerg syndrome, also known as deafness-dystonia-optic neuronopathy (DDON) syndrome; human TIMM8A can complement yeast null mutant","termid":"PBO:0084736"}


id: PBO:0011092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhytoCheletin Synthase","termid":"PBO:0011092"}


id: GO:1902609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (R)-2-hydroxy-alpha-linolenic acid.","definition_xrefs":["PMID:24214535","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(R)-2-hydroxy-alpha-linolenic acid biosynthetic process","synonyms":[{"name":"(R)-2-hydroxy-alpha-linolenic acid anabolism","type":"exact"},{"name":"(R)-2-hydroxy-alpha-linolenic acid biosynthesis","type":"exact"},{"name":"(R)-2-hydroxy-alpha-linolenic acid formation","type":"exact"},{"name":"(R)-2-hydroxy-alpha-linolenic acid synthesis","type":"exact"},{"name":"2-hydroxy-octadecatrienoic acid biosynthesis","type":"broad"}],"termid":"GO:1902609"}


id: PBO:0059735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 9","termid":"PBO:0059735"}


id: GO:0003948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-beta-D-glucosaminylamine + L-aspartate + H+.","definition_xrefs":["RHEA:11544","EC:3.5.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity","secondary_identifiers":["KEGG_REACTION:R03421","MetaCyc:3.5.1.26-RXN"],"synonyms":[{"name":"4-N-(beta-N-acetyl-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"N-aspartyl-beta-glucosaminidase activity","type":"related"},{"name":"N4-(beta-N-acetyl-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"aspartylglucosaminidase activity","type":"related"},{"name":"aspartylglucosylaminase activity","type":"related"},{"name":"aspartylglucosylamine deaspartylase activity","type":"related"},{"name":"aspartylglucosylaminidase activity","type":"related"},{"name":"aspartylglycosylamine amidohydrolase activity","type":"related"},{"name":"beta-aspartylglucosylamine amidohydrolase activity","type":"related"},{"name":"glucosylamidase activity","type":"related"},{"name":"glycosylasparaginase activity","type":"related"}],"termid":"GO:0003948"}


id: GO:0061728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-mannose from mannose.","definition_xrefs":["PMID:16339137","GOC:dph","PMID:24218558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"GDP-mannose biosynthetic process","termid":"GO:0009298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975","GO:0055086"],"is_obsolete":false,"name":"GDP-mannose biosynthetic process from mannose","termid":"GO:0061728"}


id: PBO:0028170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_pyrophosphohydrolase_activity","termid":"PBO:0028170"}


id: GO:1903162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any serine transmembrane transporter activity that is involved in serine import into cell.","definition_xrefs":["GO_REF:0000061","ISBN:0-8249-3695-6","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete serine transmembrane transporter activity involved in serine import into cell (obsolete GO:1903162)","synonyms":[{"name":"serine transmembrane transporter activity involved in serine import into cell","type":"exact"}],"termid":"GO:1903162"}


id: PR:P87315
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip3 gene.","definition_xrefs":["UniProtKB:P87315","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone transcription regulator 3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.14c","synonyms":[{"name":"Spom972h-hip3","type":"exact"}],"termid":"PR:P87315"}


id: GO:1900530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in cellular response to salt stress.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:9135147"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in cellular response to salt stress (obsolete GO:1900530)","synonyms":[{"name":"regulation of cell shape involved in cellular response to salt stress","type":"exact"},{"name":"regulation of cell shape of cellular response to ionic osmotic stress","type":"exact"},{"name":"regulation of cell shape of cellular response to salt stress","type":"exact"},{"name":"regulation of cell shape of cellular salinity response","type":"exact"}],"termid":"GO:1900530"}


id: SO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An assembly region that has been sequenced from both ends resulting in a read_pair (mate_pair).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired_end_fragment","synonyms":[{"name":"paired end fragment","type":"exact"}],"termid":"SO:0001790"}


id: PBO:0027392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid:diacylglycerol_acyltransferase_activity","termid":"PBO:0027392"}


id: PBO:0025441
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G6PD deficiency","termid":"PBO:0025441"}


id: FYECO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The assay, or growth of cells, was conducted in the absence of light.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absence of light","termid":"FYECO:0000462"}


id: PBO:0064487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase theta","termid":"PBO:0064487"}


id: MONDO:0030307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 55","secondary_identifiers":["DOID:0112337","MEDGEN:1781781","OMIM:619380","UMLS:C5543580"],"synonyms":[{"name":"SPGF55","type":"exact"},{"name":"spermatogenic failure 55","type":"exact"}],"termid":"MONDO:0030307","xrefs":{"Monarch":{"xref_id":"0030307"}}}


id: MONDO:0019648
data:
  {"annotated_genes":["SJAG_04528","SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008701"},{"annotations":[86934,86935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010966"}]},"cv_name":"mondo","definition":"Achondrogenesis describes a rare group of lethal skeletal dysplasias characterized by an endochondral ossification deficiency that leads to dwarfism with extreme micromelia, a small thorax, a prominent abdomen, anasarca and polyhydramnios. There are three types of achondrogenesis that exist and that differ clinically, radiologically, histologically and genetically: achondrogensis type 1a, type 1b and type 2.","definition_xrefs":["Orphanet:932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null,"SJAG_04528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"achondrogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:710","SCTID:2391001","ICD10CM:Q77.0","MEDGEN:84","icd11.foundation:103965243","MedDRA:10066122","NCIT:C84527","MESH:C579878","UMLS:C0001079","GARD:2882","DOID:0080043","OMIMPS:200600"],"termid":"MONDO:0019648","terms_by_termid":{"MONDO:0008701":null,"MONDO:0010966":null},"xrefs":{"Monarch":{"xref_id":"0019648"}}}


id: PBO:0053992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1311","termid":"PBO:0053992"}


id: PBO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho4","termid":"PBO:0090629"}


id: GO:1905461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GOC:rph","PMID:26493107","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell apoptotic process","termid":"GO:0034393"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"activation of VSMC apoptosis","type":"narrow"},{"name":"activation of VSMC apoptotic process","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"activation of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"positive regulation of VSMC apoptosis","type":"narrow"},{"name":"positive regulation of VSMC apoptotic process","type":"exact"},{"name":"positive regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of VSMC apoptosis","type":"narrow"},{"name":"up regulation of VSMC apoptotic process","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of VSMC apoptosis","type":"narrow"},{"name":"up-regulation of VSMC apoptotic process","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"up-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of VSMC apoptosis","type":"narrow"},{"name":"upregulation of VSMC apoptotic process","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"upregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"upregulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905461"}


id: FYPO:0000110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to pravastatin. Cells stop growing (and may die) at a concentration of pravastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to pravastatin","synonyms":[{"name":"hypersensitive to pravastatin","type":"exact"},{"name":"sensitive to pravastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to pravastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0000110"}


id: GO:0021811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between growth factors and their receptors that results in the start of cell movement, where this process is involved in glial-mediated radial migration in the cerebral cortex.","definition_xrefs":["GOC:dph","GOC:jid","PMID:12626695","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motogenic signaling initiating cell movement in cerebral cortex","termid":"GO:0021807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"growth factor signaling initiating cell movement involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"growth factor signaling initiating cell movement involved in cerebral cortex glial-mediated radial migration","type":"exact"},{"name":"growth factor signalling initiating cell movement involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021811"}


id: PBO:0046689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein dehydrogenase","termid":"PBO:0046689"}


id: GO:0047188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-hydroxy-4-aminobiphenyl + N-hydroxy-4-acetylaminonbiphenyl = N-acetoxy-4-aminobiphenyl + N-hydroxy-4-aminobiphenyl.","definition_xrefs":["EC:2.3.1.56","MetaCyc:2.3.1.56-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"aromatic-hydroxylamine O-acetyltransferase activity","secondary_identifiers":["RHEA:20325"],"synonyms":[{"name":"N,O-acetyltransferase activity","type":"related"},{"name":"N-hydroxy-2-acetylaminofluorene N-O acyltransferase activity","type":"related"},{"name":"N-hydroxy-4-acetylaminobiphenyl:N-hydroxy-4-aminobiphenyl O-acetyltransferase activity","type":"related"},{"name":"aromatic hydroxylamine acetyltransferase activity","type":"related"},{"name":"arylhydroxamate acyltransferase activity","type":"related"},{"name":"arylhydroxamic acid N,O-acetyltransferase activity","type":"related"},{"name":"arylhydroxamic acyltransferase activity","type":"related"}],"termid":"GO:0047188"}


id: PBO:0110422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript inducer of AURKA lysosomal degradation","termid":"PBO:0110422"}


id: GO:0098614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + hydrogen selenide => S-adenosyl-L-homocysteine + methaneselenol.","definition_xrefs":["PMID:14705","PMID:17988700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hydrogen selenide methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408536"],"termid":"GO:0098614"}


id: MONDO:1010134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pityriasis rosea that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pityriasis rosea, non-human animal","secondary_identifiers":["OMIA:000801"],"termid":"MONDO:1010134","xrefs":{"Monarch":{"xref_id":"1010134"}}}


id: PBO:0085084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0085084"}


id: PBO:0060162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 10 (pseudogene)","termid":"PBO:0060162"}


id: GO:0003969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA editase activity (obsolete GO:0003969)","synonyms":[{"name":"RNA editase activity","type":"exact"}],"termid":"GO:0003969"}


id: PBO:0091670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal5h2","termid":"PBO:0091670"}


id: MONDO:1010938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphosarcoma that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphosarcoma, non-human animal","termid":"MONDO:1010209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphosarcoma, rabbit","secondary_identifiers":["OMIA:000615-9986"],"termid":"MONDO:1010938","xrefs":{"Monarch":{"xref_id":"1010938"}}}


id: PBO:0083725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 113 kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis prior to SNARE-mediated fusion; interacts with and functions as a downstream effector of active, GTP-bound Sec4p, a Rab family GTPase","termid":"PBO:0083725"}


id: PBO:0067679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 864, pseudogene","termid":"PBO:0067679"}


id: GO:0031341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell killing, the process in which a cell brings about the death of another cell, either in the same or a different organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell killing","termid":"GO:0031341"}


id: PATO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000739 absolute enzyme function value (obsolete PATO:0000739)","termid":"PATO:0000739"}


id: MONDO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the cardiovascular system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of cardiovascular system","secondary_identifiers":["DOID:0060051"],"synonyms":[{"name":"cardiovascular system autoimmune disease","type":"exact"},{"name":"cardiovascular system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000603","xrefs":{"Monarch":{"xref_id":"0000603"}}}


id: GO:0106328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["RHEA:46884"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-seryl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (obsolete GO:0106328)","termid":"GO:0106328"}


id: GO:0106083
data:
  {"annotated_genes":["SJAG_05196","SJAG_01538","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[104614,98496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the nuclear membrane.","definition_xrefs":["GOC:lnp","PMID:28356353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear membrane protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106083","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: GO:0022626
data:
  {"annotated_genes":["SJAG_01364","SJAG_02312","SJAG_02755","SJAG_01128","SJAG_02510","SJAG_04342","SJAG_04324","SJAG_00465","SJAG_02870","SJAG_01226","SJAG_02081","SJAG_04475","SJAG_04174","SJAG_00748","SJAG_00749","SJAG_01551","SJAG_00220","SJAG_05216","SJAG_01676","SJAG_03043","SJAG_00544","SJAG_02253","SJAG_01194","SJAG_01548","SJAG_01296","SJAG_02682","SJAG_04626","SJAG_03262","SJAG_02477","SJAG_01568","SJAG_01087","SJAG_01606","SJAG_02340","SJAG_01588","SJAG_00034","SJAG_04204","SJAG_02243","SJAG_06612","SJAG_02802","SJAG_01365","SJAG_04814","SJAG_04256","SJAG_03919","SJAG_01322","SJAG_02585","SJAG_03424","SJAG_03364","SJAG_01721","SJAG_04478","SJAG_02597","SJAG_01411","SJAG_00629","SJAG_04160","SJAG_02479","SJAG_04847","SJAG_00523","SJAG_03568","SJAG_01387","SJAG_04672","SJAG_04534","SJAG_05248","SJAG_04020","SJAG_01853","SJAG_01202","SJAG_00940","SJAG_01565","SJAG_01608","SJAG_02531","SJAG_00921","SJAG_00503","SJAG_03127","SJAG_04304","SJAG_02207","SJAG_01287","SJAG_07014","SJAG_00069","SJAG_02891","SJAG_04414","SJAG_02121","SJAG_03971","SJAG_04029","SJAG_01580","SJAG_04695","SJAG_02749","SJAG_03666","SJAG_01366","SJAG_07013","SJAG_03383","SJAG_02840","SJAG_02020","SJAG_03762","SJAG_00726","SJAG_03159","SJAG_03326","SJAG_03122","SJAG_04188","SJAG_02046","SJAG_03133","SJAG_00166","SJAG_04176","SJAG_00765","SJAG_03922","SJAG_03422","SJAG_02546","SJAG_03197","SJAG_01609","SJAG_02890","SJAG_04066","SJAG_02871","SJAG_00541","SJAG_02224","SJAG_00468","SJAG_02184","SJAG_02535","SJAG_02522","SJAG_02335","SJAG_01512","SJAG_03335","SJAG_00384","SJAG_03254","SJAG_03423","SJAG_00537","SJAG_04897","SJAG_02611","SJAG_02904","SJAG_04746","SJAG_03425","SJAG_00733","SJAG_02894","SJAG_02283","SJAG_02803","SJAG_00155","SJAG_03034","SJAG_04663","SJAG_04168","SJAG_01132","SJAG_01632","SJAG_02861","SJAG_02280","SJAG_04998","SJAG_04476","SJAG_03859"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109708],"is_not":false,"summary":null,"term":"GO:0022626"},{"annotations":[75738,78071,78532,74600,80761,80133,96687,116362,77457,73409,72002,72863,72013,75909,78098,81509,118726,116318,71501,75489,89843,71838,81751,114029,79274,73776,75166,78840,77099,74135,75021,77057,79817,73786,80089,80841,74900,76447,58372,76411,75747,69120,71875,119274,78675,80130,73724,78154,72793,75734,78507,98856,75223,75936,92794,76054,107452,72975,81901,82080,100947,79854,98939,114030,116361,72970,76339,73576,71996,73443,96686,107451,73890,75290,73810,92793,75944,76604,77878,77090,79101,79739,64901],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0022625"},{"annotations":[76209,74925,107230,72867,80340,96536,81582,76318,103347,116036,59146,76399,79327,93376,81797,101833,75436,75848,115265,81800,75137,107204,75555,78337,71514,76245,76915,80446,75071,107229,108519,116035,76147,76920,77664,76427,72113,74449,70319,80810,101575,78845,103348,71660,72635,72881,76168,76871,73609,101576,75415,77616,78349,80060,115264,75317,72813,80168,76205,78927],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0022627"}]},"cv_name":"cellular_component","definition":"A ribosome located in the 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id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["Unimod:442#S","RESID:AA0350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: MONDO:0007833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iris pigment layer, cleavage of","secondary_identifiers":["MEDGEN:326664","UMLS:C1840140","OMIM:147610"],"synonyms":[{"name":"iris pigment layer, cleavage of","type":"exact"}],"termid":"MONDO:0007833","xrefs":{"Monarch":{"xref_id":"0007833"}}}


id: PBO:0034217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_concretized_as","termid":"PBO:0034217"}


id: GO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a misfolded protein stimulus is received and converted into a molecular signal.","definition_xrefs":["PMID:15226511","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to misfolded protein","termid":"GO:0051788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of misfolded protein","termid":"GO:0002236"}


id: PBO:0040667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell adhesion molecule (Lutheran blood group)","termid":"PBO:0040667"}


id: MONDO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract disease in which the cataract contains some transparent protein","definition_xrefs":["Wikipedia:Cataract"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"immature cataract","secondary_identifiers":["SCTID:446474007","DOID:10997","MEDGEN:755282","icd11.foundation:1444156961","UMLS:C2960113"],"synonyms":[{"name":"incipient cataract","type":"exact"},{"name":"incipient senile cataract","type":"exact"},{"name":"water clefts","type":"exact"}],"termid":"MONDO:0001175","xrefs":{"Monarch":{"xref_id":"0001175"}}}


id: GO:0018538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the generic reaction: epoxide + CO2 + NAD+ + electron donor = beta-keto acid + NADH + reduced electron donor; the electron donor may be NADPH or a dithiol. This reaction is the ring opening and carboxylation of an epoxide; for example: epoxypropane + CO2 + NAD+ + NADPH = acetoacetate + NADH + NADP+.","definition_xrefs":["PMID:9555888"],"gene_count":0,"genotype_count":0,"name":"obsolete epoxide carboxylase activity (obsolete GO:0018538)","termid":"GO:0018538"}


id: PBO:0086156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pre-rRNA processing; associated with the 90S pre-ribosome and 43S small ribosomal subunit precursor; interacts with U3 snoRNA; binds G-quadruplex (G4) structures in DNA; deletion mutant has synthetic fitness defect with an sgs1 deletion mutant","termid":"PBO:0086156"}


id: GO:0005522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"profilin binding","termid":"GO:0005522"}


id: MOD:00630
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:319","PubMed:9328283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:00630"}


id: PBO:0088088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:dolichyl-phosphate glucosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum; human ortholog ALG5 can partially complement yeast alg5 mutant","termid":"PBO:0088088"}


id: GO:0043561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}


id: MONDO:0006383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive primary cutaneous B-cell lymphoma, usually involving the lower leg. It is composed of a generally monotonous proliferation of immunoblasts, or less frequently centroblasts, with few admixed reactive cells. This type of lymphoma occurs most often in elderly women who present with rapidly growing tumors, usually on one or both legs. Dissemination to extracutaneous sites is frequent. Treatment with combination chemotherapy is usually required.","definition_xrefs":["NCIT:C45194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"primary cutaneous diffuse large B-cell lymphoma, Leg type","secondary_identifiers":["ICDO:9680/3","GARD:20160","MEDGEN:311155","Orphanet:178544","EFO:1000490","UMLS:C1709656","icd11.foundation:1418101362"],"synonyms":[{"name":"PCDLBCL,LT","type":"exact"},{"name":"primary cutaneous diffuse large B-cell lymphoma, Leg type","type":"exact"}],"termid":"MONDO:0006383","xrefs":{"Monarch":{"xref_id":"0006383"}}}


id: FYPO:0004903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell separation after cytokinesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell separation after cytokinesis RNAs are transcribed from genes whose products are involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25530312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of cell separation after cytokinesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell separation after cytokinesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell separation after cytokinesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cytokinetic cell separation gene mRNA during vegetative growth","type":"related"},{"name":"reduced level of cell separation after cytokinesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004903"}


id: MONDO:0008676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary mucosal leukokeratosis in which the cause of the disease is a mutation in the KRT4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary mucosal leukokeratosis","termid":"MONDO:0015748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"white sponge nevus 1","secondary_identifiers":["DOID:0081287","OMIM:193900","MEDGEN:860363","UMLS:C4011926"],"synonyms":[{"name":"KRT4 hereditary mucosal leukokeratosis","type":"exact"},{"name":"WHITE sponge NEVUS 1","type":"related"},{"name":"WSN1","type":"related"},{"name":"White sponge Nevus of Cannon","type":"related"},{"name":"White sponge Nevus type 1","type":"exact"},{"name":"hereditary mucosal leukokeratosis caused by mutation in KRT4","type":"exact"},{"name":"leukokeratosis, hereditary mucosal","type":"related"},{"name":"white sponge nevus 1","type":"exact"}],"termid":"MONDO:0008676","xrefs":{"Monarch":{"xref_id":"0008676"}}}


id: PBO:0073367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 2","termid":"PBO:0073367"}


id: PBO:0028205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_synthesis","termid":"PBO:0028205"}


id: GO:0097227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.","definition_xrefs":["GOC:cjm","MP:0009834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm annulus","termid":"GO:0097227"}


id: PR:P10815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin cdc13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe)","termid":"PR:000036302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.03","secondary_identifiers":["UniProtKB:P10815"],"synonyms":[{"name":"SPBC582.03","type":"related"},{"name":"Spom972h-cdc13","type":"exact"}],"termid":"PR:P10815"}


id: PBO:0043293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 12 member A","termid":"PBO:0043293"}


id: GO:0075120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a G protein-coupled receptor signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23027529","GOC:pamgo_curators","PMID:17562776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway","termid":"GO:0075118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host G protein-coupled receptor signal transduction","secondary_identifiers":["GO:0075123","GO:0075126","GO:0075129"],"synonyms":[{"name":"disruption of host G protein-coupled receptor signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host G protein-coupled receptor signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host G-protein coupled receptor protein signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host signal transduction mediated by G-protein alpha subunit","type":"narrow"},{"name":"negative regulation by symbiont of host signal transduction mediated by G-protein beta subunit","type":"narrow"},{"name":"negative regulation by symbiont of host signal transduction mediated by G-protein gamma subunit","type":"narrow"},{"name":"suppression by symbiont of host G protein-coupled receptor signal transduction","type":"exact"}],"termid":"GO:0075120"}


id: PATO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000812 odor acuity value (obsolete PATO:0000812)","termid":"PATO:0000812"}


id: GO:2000373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity","synonyms":[{"name":"positive regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"positive regulation of DNA topoisomerase II","type":"related"},{"name":"positive regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"positive regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"positive regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"positive regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"positive regulation of topoisomerase","type":"related"},{"name":"positive regulation of topoisomerase II","type":"exact"},{"name":"positive regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000373"}


id: PBO:0108510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L and NuA4 histone acetyltransferase complex ING family subunit Png1","termid":"PBO:0108510"}


id: GO:1905787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["PMID:8692859","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905787"}


id: PBO:0116620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMN1 antisense RNA 1","termid":"PBO:0116620"}


id: PR:C6Y4C9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo13 gene.","definition_xrefs":["UniProtKB:C6Y4C9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.12","synonyms":[{"name":"Spom972h-spo13","type":"exact"}],"termid":"PR:C6Y4C9"}


id: MONDO:0019463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"non-amyloid monoclonal immunoglobulin deposition disease","secondary_identifiers":["MEDGEN:1716147","Orphanet:86861","UMLS:C5394673","GARD:19073"],"synonyms":[{"name":"Randall disease","type":"exact"},{"name":"non-amyloid MIDD","type":"exact"}],"termid":"MONDO:0019463","xrefs":{"Monarch":{"xref_id":"0019463"}}}


id: PBO:0062993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C and casein kinase substrate in neurons 2","termid":"PBO:0062993"}


id: PBO:0044253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19 like cell cycle control factor 1","termid":"PBO:0044253"}


id: GO:0016512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of endothelin 1 by cleavage of the Trp21-Val22 bond in the precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme 1 activity (obsolete GO:0016512)","synonyms":[{"name":"ECE-1 activity","type":"related"},{"name":"endothelin-converting enzyme 1 activity","type":"exact"}],"termid":"GO:0016512"}


id: PBO:0085872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; HVG1 has a paralog, VRG4, that arose from the whole genome duplication","termid":"PBO:0085872"}


id: PBO:0056294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1A","termid":"PBO:0056294"}


id: GO:0140086
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure located at the interface of the basement membrane and interstitial extracellular matrix and anchoring the two types of ECM to one another.","definition_xrefs":["PMID:7767545","PMID:19945621","PMID:9334230","PMID:26377767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basement membrane/interstitial matrix interface","termid":"GO:0140086"}


id: PR:Q9UTK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTK5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal long morphology protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.04c","synonyms":[{"name":"Sp8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alm1","type":"exact"}],"termid":"PR:Q9UTK5"}


id: FYPO:0006706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a calcium-transporting ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0001985","FYPO:0002114","FYPO:0005447","FYPO:0000707","FYPO:0000138"],"is_obsolete":false,"name":"abolished calcium-transporting ATPase activity","synonyms":[{"name":"calcium-transporting ATPase activity abolished","type":"exact"}],"termid":"FYPO:0006706"}


id: GO:0007260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:10918594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"},{"relation_name":"part_of","term_name":"cell surface receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042506","GO:0042505","GO:0042507","GO:0042502","GO:0042508","GO:0042503","GO:0042504"],"synonyms":[{"name":"tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0007260"}


id: PBO:0054815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2228","termid":"PBO:0054815"}


id: PBO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase deficiency","termid":"PBO:0003093"}


id: MOD:01957
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 2-hydroxyproline.","definition_xrefs":["RESID:AA0602","ChEBI:141809","PubMed:23385463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyproline","synonyms":[{"name":"(2R)-2-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2-hydroxyproline","type":"exact"},{"name":"2-oxidanylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES 2-hydroxyproline","type":"exact"},{"name":"alpha-hydroxyproline","type":"exact"}],"termid":"MOD:01957"}


id: PBO:0042108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 181","termid":"PBO:0042108"}


id: GO:0047224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-N-acetyl-D-galactosalaminyl-[protein] + UDP-N-acetyl-D-glucosamine = 3-O-N-acetyl-beta-D-glucosaminyl-1,3-N-acetyl-D-galactosaminyl-[protein] + UDP. Linkage of the glycan to the protein occurs via the oxygen atom in the side chain of an L-serine or L-threonine residue.","definition_xrefs":["EC:2.4.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.147-RXN"],"synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to N-acetyl-D-galactosaminyl-R) beta-1,3-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"core 3-beta-GlcNAc-transferase activity","type":"related"},{"name":"core 3beta-GlcNAc-transferase activity","type":"related"},{"name":"mucin core 3 beta3-GlcNAc-transferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta(1->3)-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047224"}


id: PBO:0087088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L6A; N-terminally acetylated; binds 5.8S rRNA; homologous to mammalian ribosomal protein L6, no bacterial homolog; RPL6A has a paralog, RPL6B, that arose from the whole genome duplication","termid":"PBO:0087088"}


id: PR:O60130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.16 gene.","definition_xrefs":["UniProtKB:O60130","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein C16G5.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.16","synonyms":[{"name":"Spom972h-SPBC16G5.16","type":"exact"}],"termid":"PR:O60130"}


id: MONDO:0013453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the CRB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 8","secondary_identifiers":["GARD:10881","DOID:0110079","ICD10CM:H35.5","MEDGEN:462552","UMLS:C3151202","OMIM:613835"],"synonyms":[{"name":"CRB1 Leber congenital amaurosis","type":"exact"},{"name":"LCA8","type":"exact"},{"name":"Leber congenital amaurosis 8","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in CRB1","type":"exact"},{"name":"Leber congenital amaurosis type 8","type":"exact"}],"termid":"MONDO:0013453","xrefs":{"Monarch":{"xref_id":"0013453"}}}


id: PBO:0091151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Vph2/Vma12","termid":"PBO:0091151"}


id: PBO:0052966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE1 type transposase domain containing 1","termid":"PBO:0052966"}


id: MONDO:0020077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clonal myeloid disorders that possess both dysplastic and proliferative features but are not properly classified as either MYELODYSPLASTIC SYNDROMES or MYELOPROLIFERATIVE disorderS.","definition_xrefs":["MESH:D054437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid hemopathy","termid":"MONDO:0015756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic/myeloproliferative disease","secondary_identifiers":["Orphanet:98275","GARD:9351"],"termid":"MONDO:0020077","xrefs":{"Monarch":{"xref_id":"0020077"}}}


id: FYPO:0005604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of Rad52 focus presence during vegetative growth","termid":"FYPO:0007191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Rad52 foci during cellular response to ionizing radiation","type":"related"},{"name":"increased duration of Rad22 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Rad52 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Rad52 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005604"}


id: MONDO:0011577
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87004,87005],"is_not":false,"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body myositis","termid":"MONDO:0007827"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, proximal, and ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080719","MEDGEN:381340","OMIM:605637","UMLS:C1854106","MESH:C565311"],"synonyms":[{"name":"MYOPATHY, proximal, and ophthalmoplegia","type":"related"},{"name":"MYPOP","type":"related"},{"name":"inclusion body myopathy 3, autosomal dominant","type":"related"},{"name":"inclusion body myopathy 3, autosomal dominant, formerly","type":"related"},{"name":"myopathy with congenital joint contractures, ophthalmoplegia, and rimmed vacuoles","type":"related"},{"name":"myopathy, proximal, and ophthalmoplegia","type":"exact"},{"name":"proximal myopathy and ophthalmoplegia","type":"exact"}],"termid":"MONDO:0011577","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0011577"}}}


id: MONDO:0016205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"IRVAN syndrome","secondary_identifiers":["UMLS:C3665812","icd11.foundation:498393228","GARD:12868","MEDGEN:1435227","Orphanet:209943"],"synonyms":[{"name":"idiopathic retinal vasculitis-aneurysms-neuroretinitis syndrome","type":"exact"},{"name":"idiopathic retinal-aneurysms-neuroretinitis syndrome","type":"related"}],"termid":"MONDO:0016205","xrefs":{"Monarch":{"xref_id":"0016205"}}}


id: GO:1901075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GOC:TermGenie","GO:kmv","PMID:19402756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis, engulfment","termid":"GO:0060101"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic cell clearance","termid":"GO:2000426"},{"relation_name":"negatively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of engulfment of apoptotic cell","synonyms":[{"name":"down regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down regulation of engulfment of cell corpse","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down-regulation of engulfment of cell corpse","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"downregulation of engulfment of cell corpse","type":"exact"},{"name":"inhibition of engulfment of apoptotic cell","type":"narrow"},{"name":"inhibition of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"inhibition of engulfment of cell corpse","type":"narrow"},{"name":"negative regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"negative regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901075"}


id: GO:0007057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during meiosis I of a meiotic cell cycle in females. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in female meiosis","termid":"GO:0007056"},{"relation_name":"part_of","term_name":"female meiosis I","termid":"GO:0007144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0008150","GO:0000226","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"spindle assembly involved in female meiosis I","synonyms":[{"name":"female meiosis I spindle assembly","type":"related"}],"termid":"GO:0007057"}


id: PBO:0053326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 115","termid":"PBO:0053326"}


id: PBO:0034038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_plasma_membrane_part","termid":"PBO:0034038"}


id: PBO:0116717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phagophore assembly factor 1","termid":"PBO:0116717"}


id: PBO:0054627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2032","termid":"PBO:0054627"}


id: PR:O42925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16C6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.01c","synonyms":[{"name":"Spom972h-SPBC16C6.01c","type":"exact"}],"termid":"PR:O42925"}


id: FYPO:0002806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to arsenate ions. Cells stop growing (and may die) at a concentration of arsenate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to arsenate","synonyms":[{"name":"hypersensitive to arsenate","type":"exact"},{"name":"sensitive to arsenate during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenate during vegetative growth","type":"exact"},{"name":"sensitive to arsenate ions","type":"exact"}],"termid":"FYPO:0002806"}


id: GO:0052026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts transcription in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host transcription","synonyms":[{"name":"modulation by symbiont of host transcription","type":"exact"}],"termid":"GO:0052026"}


id: SO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 3 modification where the modification is the acetylation of the residue.","definition_xrefs":["EBI:nj","ISBN:0815341059","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_3_acetylation_site","synonyms":[{"name":"H3ac","type":"exact"},{"name":"histone 3 acetylation site","type":"exact"}],"termid":"SO:0001973"}


id: GO:0005948
data:
  {"annotated_genes":["SJAG_03985","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77424,77746],"is_not":false,"summary":null,"term":"GO:0005948"}]},"cv_name":"cellular_component","definition":"A dimeric (a large and a small chain) or tetrameric (two large and two small chains) enzyme complex. Catalyzes the formation of acetolactate from pyruvate.","definition_xrefs":["GOC:jl","PMID:16458324","PMID:8756689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03985":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acetolactate synthase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"acetohydroxyacid synthase complex","type":"exact"}],"termid":"GO:0005948","terms_by_termid":{"GO:0005948":null}}


id: FYPO:0001830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0005447","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on gluconate carbon source","synonyms":[{"name":"decreased growth on gluconate carbon source","type":"broad"},{"name":"decreased vegetative cell growth on gluconate carbon source","type":"exact"},{"name":"reduced cell growth on gluconate carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0001830"}


id: MOD:00750
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and the 3'- or 5'-end of DNA through a phosphodiester bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonucleic acid linked residue","synonyms":[{"name":"DNARes","type":"exact"}],"termid":"MOD:00750"}


id: GO:0072095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072095"}


id: GO:0140843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 7).","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain S7 O-GlcNAc transferase activity","termid":"GO:0140843"}


id: MONDO:0018155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary lateral sclerosis (PLS) is an idiopathic non-familial motor neuron disease characterized by slowly progressive upper motor neuron dysfunction leading to spasticity, mild weakness in voluntary muscle movement, hyperreflexia, and loss of motor speech production.","definition_xrefs":["Orphanet:35689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor neuron disease","termid":"MONDO:0024257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"lateral sclerosis","secondary_identifiers":["NANDO:1200008","icd11.foundation:1686688462","ICD10CM:G12.23","ICD9:335.24","DOID:230","MedDRA:10036704","MEDGEN:57591","NCIT:C129933","GARD:10684","SCTID:81211007","UMLS:C0154682"],"synonyms":[{"name":"PLS","type":"exact"},{"name":"adult-onset PLS","type":"exact"},{"name":"adult-onset primary lateral sclerosis","type":"exact"},{"name":"primary lateral sclerosis","type":"exact"}],"termid":"MONDO:0018155","xrefs":{"Monarch":{"xref_id":"0018155"}}}


id: FYPO:0002116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified transmembrane transporter activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"transmembrane transporter activity phenotype","termid":"FYPO:0002114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002114","FYPO:0001985","FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0000138"],"is_obsolete":false,"name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"}


id: PBO:0116394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular thiamine-repressible acid phosphatase Pho4","termid":"PBO:0116394"}


id: PBO:0082044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglutarate transhydrogenase, and minor D-lactate dehydrogenase; converts D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate in the presence of FAD, with concomitant reduction of pyruvate to D-lactate; minor lactate dehydrogenase activity; component of the retrograde regulon that consists of genes whose expression are stimulated by damage to mitochondria and reduced in cells grown with glutamate as the sole nitrogen source; located in the cytoplasm","termid":"PBO:0082044"}


id: MONDO:0800031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central hypoventilation syndrome, congenital","secondary_identifiers":["OMIMPS:209880","MEDGEN:220902","UMLS:C1275808"],"termid":"MONDO:0800031","xrefs":{"Monarch":{"xref_id":"0800031"}}}


id: MOD:00279
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-pyruvic acid 2-iminyl-L-cysteine.","definition_xrefs":["PubMed:1388164","RESID:AA0274","Unimod:422#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"pyruvic acid iminylated residue","termid":"MOD:01170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-pyruvic acid 2-iminyl-L-cysteine","synonyms":[{"name":"(R)-2-(1-carboxy-2-sulfanylethanimino)propanoic acid","type":"exact"},{"name":"MOD_RES N-pyruvate 2-iminyl-cysteine","type":"exact"},{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"N-pyruvic acid 2-iminyl-L-cysteine","type":"exact"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:00279"}


id: FYPO:0000329
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[121219,121223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[121460],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[121213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein modification is abnormal. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein modification during vegetative growth","references_by_uniquename":{"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_01787","SJAG_04551","SJAG_04697"],"single_locus_genotype_uniquenames":["pck2delta","pck1delta","gms1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein modification during mitotic cell cycle","type":"related"},{"name":"abnormal protein/peptide modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000329","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:0021928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to basket cells. A cerebellar basket cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:cls","GOC:dph","PMID:15157725","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basket cell precursor proliferation","termid":"GO:0021928"}


id: GO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of the N-terminal pyroglutamyl group from pGlu-His-Xaa tripeptides and pGlu-His-Xaa-Gly tetrapeptides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyroglutamyl-peptidase II activity (obsolete GO:0016921)","synonyms":[{"name":"pyroglutamyl-peptidase II activity","type":"exact"}],"termid":"GO:0016921"}


id: GO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"positive regulation of defense response to bacterium","termid":"GO:1900426"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide production","synonyms":[{"name":"activation of antibacterial peptide production","type":"narrow"},{"name":"stimulation of antibacterial peptide production","type":"narrow"},{"name":"up regulation of antibacterial peptide production","type":"exact"},{"name":"up-regulation of antibacterial peptide production","type":"exact"},{"name":"upregulation of antibacterial peptide production","type":"exact"}],"termid":"GO:0002803"}


id: MOD:00058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine to N-acetyl-L-methionine.","definition_xrefs":["PubMed:7944406","RESID:AA0049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-methionine","synonyms":[{"name":"(2S)-2-acetamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-acetylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"AcMet","type":"exact"},{"name":"MOD_RES N-acetylmethionine","type":"exact"},{"name":"N-acetyl-L-methionine","type":"exact"},{"name":"N-acetylated L-methionine","type":"exact"},{"name":"acetylmethionine","type":"exact"},{"name":"methionamine","type":"exact"}],"termid":"MOD:00058"}


id: PBO:0046673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ess-2 splicing factor homolog","termid":"PBO:0046673"}


id: GO:0006462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein complex assembly, multichaperone pathway (obsolete GO:0006462)","synonyms":[{"name":"protein complex assembly, multichaperone pathway","type":"exact"}],"termid":"GO:0006462"}


id: GO:0018602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorophenoxyacetate + 2-oxoglutarate + oxygen = 2,4-dichlorophenol + glyoxylate + succinate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity","secondary_identifiers":["MetaCyc:RXN-9863","RHEA:48984"],"termid":"GO:0018602"}


id: GO:0006817
data:
  {"annotated_genes":["SJAG_01059","SJAG_00233","SJAG_01033","SJAG_00547","SJAG_04241","SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[117631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[111525,114566,118349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035435"},{"annotations":[101177],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"The directed movement of phosphate ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phosphate ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphate transport","type":"related"}],"termid":"GO:0006817","terms_by_termid":{"GO:0035435":null,"GO:0180029":null,"GO:1990547":null,"GO:2000185":null}}


id: PBO:0079575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin D","termid":"PBO:0079575"}


id: GO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an opsin (a G protein-coupled receptor of photoreceptor cells) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:22855808","GOC:atm","PMID:20238016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"opsin transport","synonyms":[{"name":"ciliary transport of opsin","type":"narrow"}],"termid":"GO:0036372"}


id: MONDO:0027029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"HHV-6 encephalitis refers to inflammation of the brain due to an infection with human herpesvirus 6. People who have undergone allogeneic hematopoietic cell transplantation are at an increased risk for developing HHV-6 encephalitis, particularly when umbilical cord blood stem cells are used. People with immune system disorders may also be at an increased risk for developing this infection. Signs and symptoms vary, but often include confusion, anterograde amnesia (difficulty learning new information following the onset of amnesia), short-term memory loss, and seizures.Diagnosis often involves lumbar puncture, virus testing, and MRI. EEG 's may also be recommendedwhen seizures are suspected. HHV-6 encephalitis is treated with an antiviral agent with activity against HHV-6. Long term outlook (chance of full recovery) can vary considerably depending individual patient factors.","definition_xrefs":["GARD:0009667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roseolovirus infectious disease","termid":"MONDO:0005949"},{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHV-6 encephalitis","secondary_identifiers":["GARD:9667","MEDGEN:363034","UMLS:C1955629"],"synonyms":[{"name":"Human Herpesvirus 6 encephalitis","type":"related"},{"name":"Variant A or HHV-6A","type":"related"},{"name":"Variant B or HHV-6B","type":"related"}],"termid":"MONDO:0027029","xrefs":{"Monarch":{"xref_id":"0027029"}}}


id: GO:0140680
data:
  {"annotated_genes":["SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68215],"is_not":false,"summary":null,"term":"GO:0140680"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a di- or a monomethyl-lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:20531378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K36 demethylase activity","termid":"GO:0051864"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0032452","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"histone H3K36me/H3K36me2 demethylase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:1.14.11.27","MetaCyc:RXN-13186","RHEA:42032"],"synonyms":[{"name":"histone H3-di/monomethyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3K36me demethylase activity","type":"related"},{"name":"histone H3K36me2 demethylase activity","type":"broad"}],"termid":"GO:0140680","terms_by_termid":{"GO:0140680":null}}


id: MONDO:0970993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 119","secondary_identifiers":["UMLS:C5935621","OMIM:620825","MEDGEN:1859911"],"termid":"MONDO:0970993","xrefs":{"Monarch":{"xref_id":"0970993"}}}


id: GO:0005634
data:
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