# terms

id: PBO:0071479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 20","termid":"PBO:0071479"}


id: MONDO:0016532
data:
  {"annotated_genes":["SJAG_01653","SJAG_04038","SJAG_02384","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87688,87687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014150"},{"annotations":[87003,87002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"}]},"cv_name":"mondo","definition":"Lennox-Gastaut syndrome (LGS) belongs to the group of severe childhood epileptic encephalopathies.","definition_xrefs":["Orphanet:2382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome with developmental and/or epileptic encephalopathy","termid":"MONDO:0800500"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"Lennox-Gastaut syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:G40.81","MESH:D065768","NANDO:2200879","icd11.foundation:651135242","NORD:1358","SCTID:230418006","MedDRA:10048816","GARD:9912","OMIM:606369","UMLS:C0238111","NCIT:C84816","MEDGEN:116044","NANDO:1200591","DOID:0050561"],"synonyms":[{"name":"LGS","type":"exact"},{"name":"Lennox syndrome","type":"exact"},{"name":"encephalopathy of childhood","type":"related"},{"name":"epileptic encephalopathy Lennox-Gastaut type","type":"related"},{"name":"macrocephaly and epileptic encephalopathy","type":"related"}],"termid":"MONDO:0016532","terms_by_termid":{"MONDO:0014150":null,"MONDO:0014598":null},"xrefs":{"Monarch":{"xref_id":"0016532"}}}


id: GO:0141028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host microtubule cytoskeleton. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21692747","PMID:26220855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cytoskeleton","termid":"GO:0052039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host microtubule cytoskeleton","synonyms":[{"name":"disruption by symbiont of host microtubule cytoskeleton","type":"related"},{"name":"modification by symbiont of host microtubule cytoskeleton","type":"related"},{"name":"perturbation by symbiont of host microtubule cytoskeleton","type":"exact"}],"termid":"GO:0141028"}


id: GO:1903760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["PMID:18337493","GO_REF:0000059","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","synonyms":[{"name":"regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903760"}


id: GO:0008440
data:
  {"annotated_genes":["SJAG_03409","SJAG_02321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72905,77196],"is_not":false,"summary":null,"term":"GO:0008440"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:11020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 3-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.7.1.127","Reactome:R-HSA-1855153","KEGG_REACTION:R03433","MetaCyc:2.7.1.127-RXN","Reactome:R-HSA-1855233"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 3-kinase activity","type":"broad"},{"name":"IP3 3-kinase activity","type":"narrow"},{"name":"IP3K activity","type":"narrow"},{"name":"Ins(1,4,5)P3 3-kinase activity","type":"related"},{"name":"inositol trisphosphate 3-kinase activity","type":"broad"},{"name":"inositol-trisphosphate 3-kinase activity","type":"broad"}],"termid":"GO:0008440","terms_by_termid":{"GO:0008440":null}}


id: PBO:0044660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCUN1D2 antisense RNA","termid":"PBO:0044660"}


id: PBO:0056690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 11","termid":"PBO:0056690"}


id: PBO:0012018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricil/uridine permese transmembrane transporter family (predicted)","termid":"PBO:0012018"}


id: GO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043370"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper cell differentiation","synonyms":[{"name":"regulation of T-helper cell development","type":"related"}],"termid":"GO:0045622"}


id: PBO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor-like Chr3 (predicted)","termid":"PBO:0000211"}


id: GO:0047868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-2,3-dimethylmalate = dimethylmaleate + H2O.","definition_xrefs":["EC:4.2.1.85","RHEA:20253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"dimethylmaleate hydratase activity","secondary_identifiers":["KEGG_REACTION:R03069","MetaCyc:DIMETHYLMALEATE-HYDRATASE-RXN"],"synonyms":[{"name":"(2R,3S)-2,3-dimethylmalate hydro-lyase (dimethylmaleate-forming)","type":"related"},{"name":"(2R,3S)-2,3-dimethylmalate hydro-lyase activity","type":"related"}],"termid":"GO:0047868"}


id: PBO:0051458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-46","termid":"PBO:0051458"}


id: PBO:0049603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 6","termid":"PBO:0049603"}


id: PBO:0038298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_sequence","termid":"PBO:0038298"}


id: PBO:0086151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear retention of unspliced pre-mRNAs; required along with Mlp1p and Pml1p; anchored to nuclear pore complex via Mlp1p and Mlp2p; found with the subset of nuclear pores farthest from the nucleolus; may interact with ribosomes","termid":"PBO:0086151"}


id: PBO:0031065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_septated_germ_tube_morphology","termid":"PBO:0031065"}


id: MONDO:0002356
data:
  {"annotated_genes":["SJAG_02013","SJAG_04495","SJAG_02000","SJAG_00092","SJAG_03247","SJAG_03266","SJAG_01077","SJAG_02012","SJAG_00214","SJAG_03453","SJAG_04394","SJAG_04206","SJAG_04334","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89114,89113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"},{"annotations":[87576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015278"},{"annotations":[88233,88234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[88570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[89035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[86876,86875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[87184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[88153,88154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[89039,89037,86874,86873,86872,89038,86871,86870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005148"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the pancreas. Representative examples of non-neoplastic disorders include pancreatitis and pancreatic insufficiency. Representative examples of neoplastic disorders include cystadenomas, carcinomas, lymphomas, and neuroendocrine neoplasms.","definition_xrefs":["NCIT:C26842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_01077":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_03247":null,"SJAG_03266":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreas disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:577.9","DOID:26","SCTID:3855007","EFO:0009605","ICD9:577.8","MEDGEN:14583","UMLS:C0030286","MESH:D010182"],"synonyms":[{"name":"disease of pancreas","type":"exact"},{"name":"disease or disorder of pancreas","type":"exact"},{"name":"disease, pancreatic","type":"related"},{"name":"diseases, pancreatic","type":"related"},{"name":"disorder of pancreas","type":"exact"},{"name":"pancreas disease","type":"exact"},{"name":"pancreas disease or disorder","type":"exact"},{"name":"pancreatic disease","type":"related"},{"name":"pancreatic disorder","type":"exact"}],"termid":"MONDO:0002356","terms_by_termid":{"MONDO:0005148":null,"MONDO:0007453":null,"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0012992":null,"MONDO:0014488":null,"MONDO:0014674":null,"MONDO:0015278":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0002356"}}}


id: FYPO:0001252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two or more nuclei and more than one septum per cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multinucleate multiseptate cell","termid":"FYPO:0005277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"multinucleate multiseptate vegetative cell","synonyms":[{"name":"multinucleate multiseptate cell during vegetative growth","type":"exact"},{"name":"multinucleate multiseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001252"}


id: MONDO:0022180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 16 disorder","termid":"MONDO:0700023"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 trisomy","secondary_identifiers":["GARD:7060","MEDGEN:276900","NCIT:C37866","UMLS:C1519651"],"synonyms":[{"name":"mosaic trisomy 16","type":"related"},{"name":"trisomy 16","type":"related"},{"name":"trisomy chromosome 16","type":"related"}],"termid":"MONDO:0022180","xrefs":{"Monarch":{"xref_id":"0022180"}}}


id: MONDO:0019959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucagonoma is a rare, functioning type of pancreatic neuroendocrine tumor (PNET) that hypersecretes glucagon, leading to a syndrome comprised of necrolytic migratory erythema, diabetes mellitus, anemia, weight loss, mucosal abnormalities, thromboembolism, gastrointestinal and neuropsychiatric symptoms.","definition_xrefs":["Orphanet:97280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"glucagonoma","secondary_identifiers":["icd11.foundation:1918063179","MEDGEN:4908","SCTID:16424000","MedDRA:10018404","MESH:D005935","NCIT:C95597","NANDO:2100142","GARD:2496","NANDO:2200397","UMLS:C0017689"],"synonyms":[{"name":"glucagonoma","type":"exact"},{"name":"glucagonoma syndrome","type":"exact"},{"name":"pancreatic glucagonoma","type":"exact"}],"termid":"MONDO:0019959","xrefs":{"Monarch":{"xref_id":"0019959"}}}


id: PBO:0070879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 11","termid":"PBO:0070879"}


id: PR:O13648
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein arginine N-methyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein arginine N-methyltransferase rmt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.10c","secondary_identifiers":["UniProtKB:O13648"],"synonyms":[{"name":"Spom972h-PRMT3","type":"exact"}],"termid":"PR:O13648"}


id: PBO:0050363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 66","termid":"PBO:0050363"}


id: PBO:0089866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery CIA1/CFD1 fusion protein","termid":"PBO:0089866"}


id: FYPO:0007708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move from one cell tip to the other at a normal frequency and amplitude.","definition_xrefs":["PomBase:mah","PMID:30279276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal dynamic protein localization to cell tip","synonyms":[{"name":"normal dynamic protein localization to cell end","type":"exact"},{"name":"normal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"normal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"normal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007708"}


id: PBO:0014600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triman, ribonuclease involved in priRNA formation Tri1","termid":"PBO:0014600"}


id: PBO:0059543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Lys (AAA/G)","termid":"PBO:0059543"}


id: GO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of adiponectin, a protein hormone, by adipose tissue.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"adiponectin secretion","termid":"GO:0070162"}


id: MONDO:0014288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CSPP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with Jeune asphyxiating thoracic dystrophy","termid":"MONDO:0018342"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome 21","secondary_identifiers":["MEDGEN:816542","DOID:0110990","GARD:15997","UMLS:C3810212","OMIM:615636"],"synonyms":[{"name":"CSPP1 Joubert syndrome","type":"exact"},{"name":"JBTS21","type":"exact"},{"name":"Joubert syndrome 21","type":"exact"},{"name":"Joubert syndrome caused by mutation in CSPP1","type":"exact"},{"name":"Joubert syndrome type 21","type":"exact"}],"termid":"MONDO:0014288","xrefs":{"Monarch":{"xref_id":"0014288"}}}


id: GO:0030665
data:
  {"annotated_genes":["SJAG_02453","SJAG_01809","SJAG_00108","SJAG_02805","SJAG_00800","SJAG_04517","SJAG_02282","SJAG_04644","SJAG_01167","SJAG_02177","SJAG_04609","SJAG_00379","SJAG_04565","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68372,95957],"is_not":false,"summary":null,"term":"GO:0030665"},{"annotations":[114620,114832,79315,62726],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[79959,58581,110149,76140],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[58991,66540],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[81472,75509],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"clathrin-coated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"synonyms":[{"name":"clathrin coated vesicle membrane","type":"narrow"}],"termid":"GO:0030665","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030665":null}}


id: PBO:0068616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 68, pseudogene","termid":"PBO:0068616"}


id: PBO:0055955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 69","termid":"PBO:0055955"}


id: GO:0120122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prolactin, a protein hormone of the anterior pituitary gland that promotes lactation in response to the suckling stimulus of hungry young mammals.","definition_xrefs":["PMID:11015620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin metabolic process","synonyms":[{"name":"prolactin metabolism","type":"exact"}],"termid":"GO:0120122"}


id: PBO:0048857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 2 Y-linked","termid":"PBO:0048857"}


id: MONDO:0024340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroblastoma arising from the retina.","definition_xrefs":["NCIT:C6956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblastoma","termid":"MONDO:0005072"},{"relation_name":"is_a","term_name":"retina neoplasm","termid":"MONDO:0021231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal neuroblastoma","secondary_identifiers":["MEDGEN:1830429","UMLS:C5779888"],"synonyms":[{"name":"neuroblastoma of retina","type":"exact"},{"name":"neuroblastoma of the retina","type":"exact"},{"name":"retina neuroblastoma","type":"exact"},{"name":"retinal neuroblastoma","type":"exact"}],"termid":"MONDO:0024340","xrefs":{"Monarch":{"xref_id":"0024340"}}}


id: PR:Q9UUE3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.06c gene.","definition_xrefs":["UniProtKB:Q9UUE3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine N-acyltransferase C17G9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.06c","synonyms":[{"name":"Spom972h-SPBC17G9.06c","type":"exact"}],"termid":"PR:Q9UUE3"}


id: MONDO:0016062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Midline cleft of lower lip is a rare anomaly defined as Cleft No. 30 in Tessier's classification.","definition_xrefs":["Orphanet:2006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"median cleft lip/mandibule","secondary_identifiers":["UMLS:C4518460","SCTID:723383005","MEDGEN:1389145","GARD:18756"],"synonyms":[{"name":"median cleft lower facial stage","type":"exact"}],"termid":"MONDO:0016062","xrefs":{"Monarch":{"xref_id":"0016062"}}}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: MONDO:0006820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Death of cells in the kidney cortex, a common final result of various renal injuries including hypoxia; ischemia; and drug toxicity.","definition_xrefs":["MESH:D007673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney cortex necrosis","secondary_identifiers":["MEDGEN:9634","ICD9:583.6","SCTID:444691002","MedDRA:10023414","UMLS:C0022656","DOID:2973"],"synonyms":[{"name":"renal cortical necrosis","type":"exact"}],"termid":"MONDO:0006820","xrefs":{"Monarch":{"xref_id":"0006820"}}}


id: FYPO:0001872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which adhesion of a cell to a substrate or another cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell adhesion","synonyms":[{"name":"adhesion defects","type":"exact"}],"termid":"FYPO:0001872"}


id: MONDO:0021150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic characteristic (obsolete MONDO:0021150)","termid":"MONDO:0021150","xrefs":{"Monarch":{"xref_id":"0021150"}}}


id: MONDO:0015207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A esophageal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic esophageal malformation (obsolete MONDO:0015207)","secondary_identifiers":["Orphanet:108959"],"synonyms":[{"name":"isolated esophageal malformation","type":"exact"},{"name":"nonsyndromic esophageal malformation","type":"exact"}],"termid":"MONDO:0015207","xrefs":{"Monarch":{"xref_id":"0015207"}}}


id: PBO:0089058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP70 family endosomal transport protein/Nonaspanin-like","termid":"PBO:0089058"}


id: MONDO:0014925
data:
  {"annotated_genes":["SJAG_01184"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88903],"is_not":false,"summary":null,"term":"MONDO:0014925"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the NPRL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934675","GARD:18204","DOID:0081423","OMIM:617118","UMLS:C4310708"],"synonyms":[{"name":"FFEVF3","type":"exact"},{"name":"NPRL3 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 3; FFEVF3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in NPRL3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci type 3","type":"exact"}],"termid":"MONDO:0014925","terms_by_termid":{"MONDO:0014925":null},"xrefs":{"Monarch":{"xref_id":"0014925"}}}


id: PBO:0047110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 157 member C","termid":"PBO:0047110"}


id: GO:1900904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexadecanal biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of hexadecanal biosynthetic process","termid":"GO:1900902"},{"relation_name":"is_a","term_name":"positive regulation of hexadecanal metabolic process","termid":"GO:1900907"},{"relation_name":"positively_regulates","term_name":"hexadecanal biosynthetic process","termid":"GO:0006634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexadecanal biosynthetic process","synonyms":[{"name":"activation of hexadecanal anabolism","type":"narrow"},{"name":"activation of hexadecanal biosynthesis","type":"narrow"},{"name":"activation of hexadecanal biosynthetic process","type":"narrow"},{"name":"activation of hexadecanal formation","type":"narrow"},{"name":"activation of hexadecanal synthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthetic process","type":"related"},{"name":"positive regulation of hexadecanal anabolism","type":"related"},{"name":"positive regulation of hexadecanal biosynthesis","type":"related"},{"name":"positive regulation of hexadecanal formation","type":"related"},{"name":"positive regulation of hexadecanal synthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up regulation of hexadecanal anabolism","type":"related"},{"name":"up regulation of hexadecanal biosynthesis","type":"related"},{"name":"up regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up regulation of hexadecanal formation","type":"related"},{"name":"up regulation of hexadecanal synthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up-regulation of hexadecanal anabolism","type":"related"},{"name":"up-regulation of hexadecanal biosynthesis","type":"related"},{"name":"up-regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up-regulation of hexadecanal formation","type":"related"},{"name":"up-regulation of hexadecanal synthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"upregulation of hexadecanal anabolism","type":"related"},{"name":"upregulation of hexadecanal biosynthesis","type":"related"},{"name":"upregulation of hexadecanal biosynthetic process","type":"exact"},{"name":"upregulation of hexadecanal formation","type":"related"},{"name":"upregulation of hexadecanal synthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthetic process","type":"related"}],"termid":"GO:1900904"}


id: PBO:0059968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 13","termid":"PBO:0059968"}


id: PBO:0113487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; functions primarily as a transcriptional co-repressor with Cyc8p but can also function as a co-activator, recruiting SWI/SNF and SAGA complexes to promoters; target genes may be uniquely repressed by Tup1p or Cyc8p, subject to redundant repression, or in some cases de-repression of target genes in a tup1 mutant is dependent upon CYC8 and vice versa; establishes a repressive chromatin structure via histone H3/H4 interactions and stabilizing nucleosomes over promoters","termid":"PBO:0113487"}


id: PBO:0017059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mug2/mug135/meu2 family, with repeat expansion","termid":"PBO:0017059"}


id: GO:0080065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4-alpha-methyl-delta7-sterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy,delta7-sterol + 3 NADP+ + 3 H2O.","definition_xrefs":["PMID:14653780","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"4-alpha-methyl-delta7-sterol oxidation","synonyms":[{"name":"4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase activity","type":"related"}],"termid":"GO:0080065"}


id: GO:0005366
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73709,74706],"is_not":false,"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: myo-inositol(out) + H+(out) = myo-inositol(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol transmembrane transporter activity","termid":"GO:0005365"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"myo-inositol:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-429101","RHEA:60364"],"synonyms":[{"name":"hydrogen/myo-inositol transporter activity","type":"broad"},{"name":"myo-inositol:hydrogen symporter activity","type":"exact"}],"termid":"GO:0005366","terms_by_termid":{"GO:0005366":null}}


id: GO:0035601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acyl group, any group or radical of the form RCO- where R is an organic group, from a protein amino acid.","definition_xrefs":["GOC:se","PMID:12080046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deacylation","synonyms":[{"name":"protein amino acid deacylation","type":"exact"}],"termid":"GO:0035601"}


id: FYPO:0005476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased filamentous actin level","synonyms":[{"name":"decreased accumulation of filamentous actin in cell","type":"related"},{"name":"decreased cellular F-actin level","type":"exact"},{"name":"decreased cellular filamentous actin level","type":"exact"},{"name":"decreased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"decreased filamentous actin level during vegetative growth","type":"exact"},{"name":"reduced filamentous actin level","type":"exact"}],"termid":"FYPO:0005476"}


id: GO:0061644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, CENP-A containing chromatin.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"},{"relation_name":"is_a","term_name":"protein localization to chromosome, centromeric region","termid":"GO:0071459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to CENP-A containing chromatin","termid":"GO:0061644"}


id: MONDO:0032857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 11, malabsorptive, congenital","secondary_identifiers":["UMLS:C5231449","OMIM:618662","MEDGEN:1684754"],"synonyms":[{"name":"DIAR11","type":"related"},{"name":"DIARRHEA 11, MALABSORPTIVE, CONGENITAL","type":"related"},{"name":"Intractable Diarrhea of Infancy Syndrome","type":"related"},{"name":"Intractable Diarrhoea of Infancy Syndrome","type":"related"}],"termid":"MONDO:0032857","xrefs":{"Monarch":{"xref_id":"0032857"}}}


id: GO:1901304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polyamine biosynthetic process","termid":"GO:0010967"},{"relation_name":"regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spermidine biosynthetic process","synonyms":[{"name":"regulation of spermidine anabolism","type":"exact"},{"name":"regulation of spermidine biosynthesis","type":"exact"},{"name":"regulation of spermidine formation","type":"exact"},{"name":"regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901304"}


id: MONDO:0006255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the large blood vessels. It is characterized by the presence of tumor cells that grow within the lumen of the blood vessels. The intraluminal tumor growth may result in vascular obstruction and spread of tumor emboli to peripheral organs. The prognosis is usually poor.","definition_xrefs":["NCIT:C53677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell sarcoma","termid":"MONDO:0002927"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intimal sarcoma","secondary_identifiers":["MEDGEN:317791","ONCOTREE:INTS","EFO:1000305","UMLS:C1708550"],"synonyms":[{"name":"INTS","type":"related"}],"termid":"MONDO:0006255","xrefs":{"Monarch":{"xref_id":"0006255"}}}


id: PBO:0091863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbh2, domesticated transposable element","termid":"PBO:0091863"}


id: MONDO:0004721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete liver neoplasm (obsolete MONDO:0004721)","termid":"MONDO:0004721","xrefs":{"Monarch":{"xref_id":"0004721"}}}


id: GO:1990817
data:
  {"annotated_genes":["SJAG_03257","SJAG_02383","SJAG_02725","SJAG_00797","SJAG_01176","SJAG_02370","SJAG_04946","SJAG_02720"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59555,64713,70471,70640,77999,80001,80688,98038],"is_not":false,"summary":null,"term":"GO:1990817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n)-3'-adenine ribonucleotide. The primer may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["PMID:13965521","RHEA:11332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_03257":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"poly(A) RNA polymerase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN","EC:2.7.7.19","Reactome:R-HSA-9833031","Reactome:R-HSA-72185"],"synonyms":[{"name":"NTP polymerase activity","type":"broad"},{"name":"RNA adenylating enzyme","type":"exact"},{"name":"RNA adenyltransferase activity","type":"exact"},{"name":"RNA adenylyltransferase activity","type":"exact"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"GO:1990817","terms_by_termid":{"GO:1990817":null}}


id: MONDO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of ear ossicle","secondary_identifiers":["DOID:11783","ICD9:385.24"],"synonyms":[{"name":"partial loss or necrosis of ear ossicles","type":"exact"}],"termid":"MONDO:0001365","xrefs":{"Monarch":{"xref_id":"0001365"}}}


id: SO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by deleting two bases.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_frameshift","synonyms":[{"name":"minus 2 frameshift","type":"exact"}],"termid":"SO:0000867"}


id: PBO:0066862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 162","termid":"PBO:0066862"}


id: GO:0015377
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in).","definition_xrefs":["PMID:31747317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"monoatomic anion:monoatomic cation symporter activity","termid":"GO:0015296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloride:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["TC:2.A.30"],"synonyms":[{"name":"cation:chloride cotransporter activity","type":"broad"},{"name":"cation:chloride symporter activity","type":"broad"}],"termid":"GO:0015377","terms_by_termid":{"GO:0015379":null}}


id: MONDO:0014635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the RBP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 10","secondary_identifiers":["GARD:16110","MEDGEN:909133","OMIM:616428","UMLS:C4225330"],"synonyms":[{"name":"MCOPCB10","type":"related"},{"name":"RBP4 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia, isolated, with coloboma 10","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in RBP4","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 10","type":"exact"}],"termid":"MONDO:0014635","xrefs":{"Monarch":{"xref_id":"0014635"}}}


id: MONDO:0012825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant soft tissue neoplasm of uncertain differentiation, characterized by the presence of chondroblast-like cells in a myxoid stroma and a multinodular growth pattern. The most common sites of involvement are the deep soft tissues of the extremities, particularly the thigh. It usually presents as an enlarging soft tissue mass. Patients may have long survivals, but local recurrences and metastases occur in approximately half of the cases. The most common site of metastasis is the lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extraskeletal myxoid chondrosarcoma","secondary_identifiers":["OMIM:612237","MESH:C563195","GARD:17105","DOID:6496","ONCOTREE:EMCHS","NCIT:C27502","Orphanet:209916","SCTID:404079008","UMLS:C1275278","MEDGEN:220892","ICD9:171.9"],"synonyms":[{"name":"EMC","type":"related"},{"name":"chondrosarcoma, extraskeletal myxoid","type":"related"},{"name":"extraosseous chondrosarcoma","type":"exact"},{"name":"extraskeletal chondrosarcoma","type":"exact"},{"name":"myxoid extraosseous chondrosarcoma","type":"exact"},{"name":"myxoid extraskeletal chondrosarcoma","type":"exact"}],"termid":"MONDO:0012825","xrefs":{"Monarch":{"xref_id":"0012825"}}}


id: PBO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0000703"}


id: PBO:0086133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for maturation of mitochondrial [4Fe-4S] proteins; functions in a complex with Isa1p and possibly Iba57p; localizes to the mitochondrial intermembrane space, overexpression of ISA2 suppresses grx5 mutations","termid":"PBO:0086133"}


id: PBO:0038717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 12","termid":"PBO:0038717"}


id: PBO:0042394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD302 molecule","termid":"PBO:0042394"}


id: PR:000050529
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me1(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf1 gene translation product, initiator methionine removed monomethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf1/Me1(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050529"}


id: FYPO:0002890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is abnormal. The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiosis I","termid":"FYPO:0005651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal horsetail nucleus morphology","synonyms":[{"name":"abnormal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0002890"}


id: PBO:0034512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_protein_location_at_cell_tip","termid":"PBO:0034512"}


id: PBO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mads BoX protein","termid":"PBO:0004021"}


id: PBO:0117085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARGC1A antisense RNA 1","termid":"PBO:0117085"}


id: GO:0032049
data:
  {"annotated_genes":["SJAG_00168","SJAG_03563","SJAG_03700","SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72946,81757,94813,119698],"is_not":false,"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cardiolipin, 1,3-bis(3-phosphatidyl)glycerol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"},{"relation_name":"is_a","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cardiolipin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483076","MetaCyc:PWY-5269"],"synonyms":[{"name":"diphosphatidylglycerol biosynthesis","type":"related"},{"name":"diphosphatidylglycerol biosynthetic process","type":"related"}],"termid":"GO:0032049","terms_by_termid":{"GO:0032049":null}}


id: PBO:0058308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4681","termid":"PBO:0058308"}


id: MONDO:1010721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any deficiency in fumarylacetoacetate hydrolase that occurs in rabbits due to a mutation in the FAH gene created by genetic engineering or gene editing. Fumarylacetoacetate hydrolase is an enzyme that catalyzes the last step of tyrosine metabolism.","definition_xrefs":["OMIA:002078-9986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"metabolic disease, non-human animal","termid":"MONDO:1011331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinemia type 1, FAH-related, rabbit","synonyms":[{"name":"tyrosinemia type I, rabbit","type":"related"}],"termid":"MONDO:1010721","xrefs":{"Monarch":{"xref_id":"1010721"}}}


id: GO:0051616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of histamine uptake","synonyms":[{"name":"regulation of histamine import","type":"exact"}],"termid":"GO:0051616"}


id: FYPO:0001139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of leucine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal leucine import","synonyms":[{"name":"abnormal L-leucine import","type":"exact"},{"name":"abnormal L-leucine import across plasma membrane","type":"exact"},{"name":"abnormal leucine import during mitotic cell cycle","type":"related"},{"name":"abnormal leucine import during vegetative growth","type":"exact"},{"name":"abnormal leucine import into cell","type":"exact"},{"name":"abnormal leucine uptake","type":"exact"}],"termid":"FYPO:0001139"}


id: PR:O94621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp109 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein usp109 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.12","synonyms":[{"name":"Spom972h-usp109","type":"exact"}],"termid":"PR:O94621"}


id: PBO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_methyltransferase_activity","termid":"PBO:0036153"}


id: PBO:0084143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity glucose transporter of the major facilitator superfamily; expression is induced by low levels of glucose and repressed by high levels of glucose","termid":"PBO:0084143"}


id: MONDO:1012117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, sheep","secondary_identifiers":["OMIA:000527-9940"],"termid":"MONDO:1012117","xrefs":{"Monarch":{"xref_id":"1012117"}}}


id: PBO:0072678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rubicon like autophagy enhancer","termid":"PBO:0072678"}


id: PBO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein-specific kinase Dsk1","termid":"PBO:0003355"}


id: FYECO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which chloride ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cl ions","synonyms":[{"name":"chloride ions added","type":"exact"}],"termid":"FYECO:0000032"}


id: GO:1904316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:9321918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"response to PAF","type":"exact"},{"name":"response to platelet-activating factor","type":"exact"}],"termid":"GO:1904316"}


id: GO:0050164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + CoA + NADP+ = CO2 + NADPH + succinyl-CoA.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxoglutarate dehydrogenase (NADP+) activity (obsolete GO:0050164)","termid":"GO:0050164"}


id: PBO:0085846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylated in response to alpha factor; protein abundance increases in response to DNA replication stress","termid":"PBO:0085846"}


id: GO:0046713
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The directed movement of borate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["PMID:21710975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"borate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"boron transport","type":"related"}],"termid":"GO:0046713","terms_by_termid":{"GO:0140159":null}}


id: FYPO:0006592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle forms with microtubules emanating from only one pole, nucleated from the old spindle pole body.","definition_xrefs":["PomBase:mah","PMID:19942852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar mitotic spindle","termid":"FYPO:0000276"},{"relation_name":"output_of","term_name":"abolished mitotic spindle microtubule nucleation from spindle pole body","termid":"FYPO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0000337","FYPO:0000120","FYPO:0002399"],"is_obsolete":false,"name":"monopolar mitotic spindle nucleated from old spindle pole body","synonyms":[{"name":"monopolar mitotic spindle nucleated from old SPB","type":"exact"},{"name":"monopolar mitotic spindle nucleated from old spindle pole body during mitotic cell cycle","type":"exact"},{"name":"monopolar mitotic spindle nucleated from old spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006592"}


id: PBO:0040641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper ATF-like transcription factor 2","termid":"PBO:0040641"}


id: GO:0090225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the number of microtubules in a given region of the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of spindle density (obsolete GO:0090225)","termid":"GO:0090225"}


id: GO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pivalate + H+ + HSCoA + ATP = pivalyl-CoA + PPi + AMP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pivalate-CoA ligase activity (obsolete GO:0034783)","termid":"GO:0034783"}


id: PBO:0074210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 3","termid":"PBO:0074210"}


id: PBO:0091246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase, (Old yellow enzyme) involved in small alpha,beta-unsaturated carbonyl compounds","termid":"PBO:0091246"}


id: MONDO:0700126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal disorder consisting of the presence of an extra chromosome 21.","definition_xrefs":["PMID:29218069","MONDO:patterns/trisomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Down syndrome","termid":"MONDO:0008608"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 21","secondary_identifiers":["UMLS:C3537167","MEDGEN:760825"],"termid":"MONDO:0700126","xrefs":{"Monarch":{"xref_id":"0700126"}}}


id: GO:0004498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: calcidiol + H+ + NADPH + O2 = calcitriol + H2O + NADP+.","definition_xrefs":["RHEA:20573","EC:1.14.15.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"calcidiol 1-monooxygenase activity","secondary_identifiers":["MetaCyc:CALCIDIOL-1-MONOOXYGENASE-RXN","Reactome:R-HSA-5602186","Reactome:R-HSA-209868","KEGG_REACTION:R03610"],"synonyms":[{"name":"1-hydroxylase-25-hydroxyvitamin D3 activity","type":"related"},{"name":"25-OHD-1 alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxy D3-1alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxy vitamin D3 1-alpha-hydroxylase activity","type":"exact"},{"name":"25-hydroxycholecalciferol 1-hydroxylase activity","type":"exact"},{"name":"25-hydroxycholecalciferol 1-monooxygenase activity","type":"related"},{"name":"25-hydroxycholecalciferol 1alpha-hydroxylase activity","type":"related"},{"name":"25-hydroxycholecalciferol-1-hydroxylase activity","type":"related"},{"name":"25-hydroxyvitamin D-1 alpha hydroxylase activity","type":"related"},{"name":"25-hydroxyvitamin D3 1alpha-hydroxylase activity","type":"related"},{"name":"calcidiol,NADPH:oxygen oxidoreductase (1-hydroxylating)","type":"exact"},{"name":"cytochrome P450 CYP27B","type":"narrow"}],"termid":"GO:0004498"}


id: MONDO:0010151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle disorder","termid":"MONDO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tricarboxylic acid cycle, defect of","secondary_identifiers":["OMIM:275370","UMLS:C1848746","MEDGEN:376430","MESH:C564762"],"synonyms":[{"name":"tricarboxylic acid cycle, defect of","type":"exact"}],"termid":"MONDO:0010151","xrefs":{"Monarch":{"xref_id":"0010151"}}}


id: GO:1902497
data:
  {"annotated_genes":["SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"}]},"cv_name":"biological_process","definition":"A process in which an iron-sulfur cluster is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","PMID:19810706","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"},{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"iron-sulfur cluster transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"iron-sulfur cluster transport","type":"broad"}],"termid":"GO:1902497","terms_by_termid":{"GO:0140466":null}}


id: PBO:0072038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 8","termid":"PBO:0072038"}


id: MONDO:0015820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous lymphoma","termid":"MONDO:0018898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"primary cutaneous B-cell lymphoma","secondary_identifiers":["GARD:20165","NCIT:C6858","SCTID:402881008","ICD9:202.80","UMLS:C1274310","MEDGEN:697651","Orphanet:178563"],"termid":"MONDO:0015820","xrefs":{"Monarch":{"xref_id":"0015820"}}}


id: SO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ss_RNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as single stranded RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ss_RNA_viral_sequence","synonyms":[{"name":"single strand RNA virus","type":"exact"},{"name":"ss RNA viral sequence","type":"exact"}],"termid":"SO:0001199"}


id: MONDO:0018379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"avascular necrosis","termid":"MONDO:0018373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary avascular necrosis","secondary_identifiers":["MEDGEN:1842421","GARD:21664","Orphanet:399302","UMLS:C5680038"],"synonyms":[{"name":"primary AVN","type":"exact"}],"termid":"MONDO:0018379","xrefs":{"Monarch":{"xref_id":"0018379"}}}


id: PBO:0073534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like, endophilin B2","termid":"PBO:0073534"}


id: PBO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 11, pseudogene","termid":"PBO:0047720"}


id: PBO:0086690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by cell wall perturbation","termid":"PBO:0086690"}


id: MONDO:0015192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified intestinal pseudoobstruction (obsolete MONDO:0015192)","secondary_identifiers":["Orphanet:104078"],"termid":"MONDO:0015192","xrefs":{"Monarch":{"xref_id":"0015192"}}}


id: PR:Q9HDX5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ARV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00777","PANTHER:PTHR14467:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.15","secondary_identifiers":["UniProtKB:Q9HDX5"],"synonyms":[{"name":"Spom972h-ARV1","type":"exact"}],"termid":"PR:Q9HDX5"}


id: MONDO:0034146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disorder of glutamine metabolism","termid":"MONDO:0017352"},{"relation_name":"is_a","term_name":"autosomal recessive spastic ataxia","termid":"MONDO:0017847"},{"relation_name":"is_a","term_name":"glutaminase deficiency","termid":"MONDO:0600001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"spastic ataxia-dysarthria due to glutaminase deficiency","secondary_identifiers":["Orphanet:557056","MEDGEN:1814477","UMLS:C5681336","GARD:22247"],"termid":"MONDO:0034146","xrefs":{"Monarch":{"xref_id":"0034146"}}}


id: GO:0098613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + methaneselenol => S-adenosyl-L-homocysteine + dimethyl selenide.","definition_xrefs":["PMID:14705","PMID:4380351","PMID:17988700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"methaneselenol methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408541"],"termid":"GO:0098613"}


id: PBO:0030944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_polymerization_or_depolymerization","termid":"PBO:0030944"}


id: MONDO:0031332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bleeding syndrome characterized by spontaneous mucocutaneous bleeding and an exaggerated response to trauma due to a constitutional thrombocytopenia","definition_xrefs":["Orphanet:849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Glanzmann thrombasthenia","termid":"MONDO:0100326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Glanzmann thrombasthenia 1","secondary_identifiers":["OMIM:273800","MESH:D013915","NCIT:C61249","DOID:2219","SCTID:32942005","GARD:15240"],"synonyms":[{"name":"BDPLT2","type":"exact"},{"name":"Diacyclothrombopathia 2B 3A","type":"related"},{"name":"GP IIb-IIIa Complex, deficiency of","type":"related"},{"name":"GT","type":"related"},{"name":"Glanzmann thrombasthenia","type":"broad"},{"name":"Glanzmann thrombasthenia 1","type":"exact"},{"name":"Glanzmann thrombasthenia type A","type":"related"},{"name":"Glanzmann's thrombasthenia","type":"broad"},{"name":"Platelet fibrinogen receptor, deficiency of","type":"related"},{"name":"Platelet glycoprotein 2B 3A deficiency","type":"related"},{"name":"Platelet glycoprotein IIb-IIIa deficiency","type":"related"},{"name":"Thrombocytasthenia","type":"exact"},{"name":"bleeding disorder, Platelet-type, 2","type":"related"},{"name":"deficiency of GP 2B 3A complex","type":"related"},{"name":"deficiency of GP IIb-IIIa complex","type":"exact"},{"name":"deficiency of glycoprotein complex IIb-IIIa","type":"exact"},{"name":"deficiency of platelet fibrinogen receptor","type":"exact"},{"name":"glycoprotein Complex IIb-IIIa, deficiency of","type":"related"},{"name":"glycoprotein IIb/IIIa defect","type":"exact"},{"name":"platelet glycoprotein IIb-IIIa deficiency","type":"exact"},{"name":"platelet-type bleeding disorder 2","type":"exact"},{"name":"thrombasthenia","type":"exact"},{"name":"thrombasthenia of Glanzmann and Naegeli","type":"exact"}],"termid":"MONDO:0031332","xrefs":{"Monarch":{"xref_id":"0031332"}}}


id: FYPO:0003706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing K-252a.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on K-252a","synonyms":[{"name":"normal cell population growth in presence of K-252a","type":"exact"},{"name":"normal cell population growth on K-252a","type":"exact"},{"name":"normal cellular response to K-252a","type":"related"},{"name":"normal vegetative cell population growth on K-252a","type":"exact"}],"termid":"FYPO:0003706"}


id: MONDO:0019397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"unknown leukodystrophy","secondary_identifiers":["Orphanet:84096"],"termid":"MONDO:0019397","xrefs":{"Monarch":{"xref_id":"0019397"}}}


id: PBO:0000778
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.99.18","termid":"PBO:0000778"}


id: PBO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 1","termid":"PBO:0044696"}


id: MONDO:0010675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, cardiac type","secondary_identifiers":["MEDGEN:254845","MESH:C563247","OMIM:309930","UMLS:C1442927"],"synonyms":[{"name":"muscular dystrophy, cardiac type","type":"exact"}],"termid":"MONDO:0010675","xrefs":{"Monarch":{"xref_id":"0010675"}}}


id: GO:1903814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GOC:TermGenie","PMID:23897233","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"regulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903814"}


id: FYPO:0006378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum during vegetative growth","synonyms":[{"name":"normal protein localisation to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"normal protein localization to ER during vegetative growth","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006378"}


id: GO:0098895
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"postsynaptic endosome membrane","termid":"GO:0098895"}


id: PR:000044503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe) that has been phosphorylated on a Ser residue within the C-terminal self-inhibitory tail. Example: UniProtKB:P87050-1, Ser-755, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:24316795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe)","termid":"PR:000030008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr2 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC57A10.02","synonyms":[{"name":"cdr2 phosphorylated","type":"related"}],"termid":"PR:000044503"}


id: PBO:0004389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L29","termid":"PBO:0004389"}


id: SO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region within an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal_intron_region","synonyms":[{"name":"spliceosomal intron region","type":"exact"}],"termid":"SO:0000841"}


id: PBO:0047050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111 trypsin like peptidase A","termid":"PBO:0047050"}


id: GO:0008848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enterobactin synthetase (obsolete GO:0008848)","synonyms":[{"name":"enterobactin synthetase","type":"exact"},{"name":"enterochelin synthetase activity","type":"exact"},{"name":"nonribosomal peptide synthetase","type":"related"}],"termid":"GO:0008848"}


id: MOD:01847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine sulfinyl phosphate.","definition_xrefs":["RESID:AA0557","PubMed:16565085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine sulfinyl phosphate","synonyms":[{"name":"(2R)-2-amino-3-[(phosphonooxy)sulfinyl]propanoic acid","type":"exact"},{"name":"L-cysteine sulfinyl phosphate","type":"exact"},{"name":"cysteine sulfinic phosphoryl ester","type":"exact"}],"termid":"MOD:01847"}


id: PBO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2","termid":"PBO:0048789"}


id: GO:0009458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A hemeprotein whose characteristic mode of action involves transfer of reducing equivalents associated with a reversible change in oxidation state of the prosthetic group. This redox change involves a single electron, reversible equilibrium between the Fe(II) and Fe(III) states of the central iron atom.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome (obsolete GO:0009458)","synonyms":[{"name":"cytochrome","type":"exact"}],"termid":"GO:0009458"}


id: MONDO:0700335
data:
  {"annotated_genes":["SJAG_01322","SJAG_01240","SJAG_01671","SJAG_02919","SJAG_02611","SJAG_04621","SJAG_03815","SJAG_03145","SJAG_01139","SJAG_02431","SJAG_04567","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032592"},{"annotations":[88297,88298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030300"},{"annotations":[87289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859358"},{"annotations":[87932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012808"},{"annotations":[88203,88202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013198"},{"annotations":[88803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013339"},{"annotations":[86881,86882,86880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014073"},{"annotations":[87912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[87914,87913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"}]},"cv_name":"mondo","definition":"A rare familial cardiomyopathy characterized by the dilation of left ventricle and progressively impairing of systolic ventricular function, in the absence of abnormal loading conditions or coronary artery disease sufficient to cause global systolic impairment. The disease may cause heart failure or arrhythmia. The disease is isolated when no additional atypical cardiac or extracardiac manifestations are present.","definition_xrefs":["Orphanet:154"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"qualitative or quantitative defects of dystrophin","termid":"MONDO:0016147"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01139":null,"SJAG_01240":null,"SJAG_01322":null,"SJAG_01671":null,"SJAG_02431":null,"SJAG_02611":null,"SJAG_02919":null,"SJAG_03145":null,"SJAG_03703":null,"SJAG_03815":null,"SJAG_04567":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated dilated cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826005","UMLS:C5679590"],"synonyms":[{"name":"familial isolated dilated cardiomyopathy","type":"exact"},{"name":"familial or idiopathic dilated cardiomyopathy","type":"exact"}],"termid":"MONDO:0700335","terms_by_termid":{"MONDO:0012808":null,"MONDO:0013198":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013339":null,"MONDO:0014073":null,"MONDO:0030300":null,"MONDO:0032592":null,"MONDO:0859358":null},"xrefs":{"Monarch":{"xref_id":"0700335"}}}


id: PBO:0090363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP2 subunit Alp4","termid":"PBO:0090363"}


id: PBO:0067219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 286, pseudogene","termid":"PBO:0067219"}


id: PBO:0044050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSRP2 pseudogene 1","termid":"PBO:0044050"}


id: PBO:0053464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 426","termid":"PBO:0053464"}


id: FYPO:0002087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles at one or both cell tips than normal during interphase of the mitotic cell cycle, when the cell is growing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"exocytic vesicles present in increased numbers at cell tip during mitotic interphase","synonyms":[{"name":"accumulation of exocytic vesicles at cell tip during mitotic interphase","type":"related"},{"name":"additional exocytic vesicles present at cell tip during mitotic interphase","type":"exact"},{"name":"exocytic vesicles present in greater numbers at cell tip during mitotic interphase","type":"exact"},{"name":"exocytic vesicles present in increased numbers at cell end during mitotic interphase","type":"exact"},{"name":"exocytic vesicles present in increased numbers at cell tip during cell growth","type":"exact"},{"name":"exocytic vesicles present in increased numbers at cell tip during cell growth during interphase of mitotic cell cycle","type":"exact"},{"name":"exocytic vesicles present in increased numbers at cell tip during mitotic interphase during vegetative growth","type":"exact"},{"name":"exocytotic vesicles present in increased numbers at cell tip during mitotic interphase","type":"exact"},{"name":"extra exocytic vesicles at cell tip during mitotic interphase","type":"exact"},{"name":"post-Golgi secretory vesicles present in increased numbers at cell tip during mitotic interphase","type":"related"}],"termid":"FYPO:0002087"}


id: GO:0003872
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79525],"is_not":false,"summary":null,"term":"GO:0003872"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose-6-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"6-phosphofructokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:6PFRUCTPHOS-RXN","Reactome:R-HSA-70467","RHEA:16109"],"synonyms":[{"name":"6-phosphofructokinase reduction","type":"exact"},{"name":"6-phosphofructose 1-kinase activity","type":"related"},{"name":"ATP-dependent phosphofructokinase activity","type":"related"},{"name":"ATP:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"PFK","type":"related"},{"name":"fructose 6-phosphate kinase activity","type":"related"},{"name":"fructose 6-phosphokinase activity","type":"related"},{"name":"nucleotide triphosphate-dependent phosphofructokinase activity","type":"related"},{"name":"phospho-1,6-fructokinase activity","type":"related"},{"name":"phosphofructokinase (phosphorylating)","type":"related"},{"name":"phosphofructokinase I activity","type":"related"},{"name":"phosphohexokinase activity","type":"broad"}],"termid":"GO:0003872","terms_by_termid":{"GO:0003872":null}}


id: GO:0018135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine cyclase activity (obsolete GO:0018135)","synonyms":[{"name":"peptidyl-cysteine cyclase activity","type":"exact"}],"termid":"GO:0018135"}


id: PBO:0076147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUN domain containing ossification factor","termid":"PBO:0076147"}


id: MONDO:0010756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Von Willebrand disease, X-linked form","secondary_identifiers":["MESH:C564041","MEDGEN:333255","OMIM:314560","UMLS:C1839113"],"synonyms":[{"name":"Von Willebrand disease, X-linked","type":"related"},{"name":"Von Willebrand disease, X-linked form","type":"exact"}],"termid":"MONDO:0010756","xrefs":{"Monarch":{"xref_id":"0010756"}}}


id: FYPO:0005102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a protein found associated with chromatin at the mating type region is lower than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:19117951","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level at silent mating-type cassette","synonyms":[{"name":"decreased protein level at mating type region","type":"exact"},{"name":"decreased protein level at mating type region chromatin","type":"exact"},{"name":"decreased protein level at mating type region during mitotic cell cycle","type":"related"},{"name":"decreased protein level at mating type region during vegetative growth","type":"exact"},{"name":"decreased protein level at mating type region heterochromatin","type":"exact"},{"name":"reduced protein level at mating type region","type":"exact"}],"termid":"FYPO:0005102"}


id: GO:0051456
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89635,95605],"is_not":false,"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis II. During meiosis II sister kinetochores are situated facing opposite spindle poles and bipolar attachment of the sister chromosomes to the spindle occurs.","definition_xrefs":["GOC:tb","GOC:clt","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase II chromosome alignment","termid":"GO:0043061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to meiosis II kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of meiotic spindle microtubules to kinetochore in meiosis II","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiosis II","type":"related"},{"name":"meiotic bipolar attachment","type":"related"}],"termid":"GO:0051456","terms_by_termid":{"GO:0051456":null}}


id: GO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become inner cell mass cells.","definition_xrefs":["GOC:dph","ISBN:0198542771","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"inner cell mass cell differentiation","termid":"GO:0001826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cell fate commitment","termid":"GO:0001827"}


id: GO:0006053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylmannosamine metabolic process","termid":"GO:0006051"},{"relation_name":"is_a","term_name":"mannosamine catabolic process","termid":"GO:0046346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine catabolic process","synonyms":[{"name":"N-acetylmannosamine breakdown","type":"exact"},{"name":"N-acetylmannosamine catabolism","type":"exact"},{"name":"N-acetylmannosamine degradation","type":"exact"}],"termid":"GO:0006053"}


id: GO:0045309
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74208,79890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated amino acid residue within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein binding","termid":"GO:0051219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein phosphorylated amino acid binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoprotein amino acid binding","type":"related"}],"termid":"GO:0045309","terms_by_termid":{"GO:1990269":null}}


id: MONDO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete olmsted syndrome 2 (obsolete MONDO:0030965)","termid":"MONDO:0030965","xrefs":{"Monarch":{"xref_id":"0030965"}}}


id: PBO:0053665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 842","termid":"PBO:0053665"}


id: PBO:0013476
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A suppresses accumulation of septated cells, but does not restore wild-type checkpoint function, in chk1delta mutant","termid":"PBO:0013476"}


id: GO:0031426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a primary mRNA transcript containing more than one complete protein-coding region into individual mature mRNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"polycistronic mRNA processing","termid":"GO:0031426"}


id: PBO:0089335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine kinase Eki1","termid":"PBO:0089335"}


id: PBO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec20 (predicted)","termid":"PBO:0002369"}


id: PBO:0061707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 2","termid":"PBO:0061707"}


id: GO:1904594
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["GO_REF:0000058","PMID:25417108","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"regulation of transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904594","terms_by_termid":{"GO:1904595":null}}


id: PBO:0030860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_in_spores","termid":"PBO:0030860"}


id: PBO:0063680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 4","termid":"PBO:0063680"}


id: PBO:0077393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132A","termid":"PBO:0077393"}


id: PBO:0067199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 263, pseudogene","termid":"PBO:0067199"}


id: GO:1901948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","termid":"GO:1901947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate catabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate breakdown","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate catabolism","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate degradation","type":"exact"}],"termid":"GO:1901948"}


id: GO:0070857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of bile acid biosynthetic process","synonyms":[{"name":"regulation of bile acid anabolism","type":"exact"},{"name":"regulation of bile acid biosynthesis","type":"exact"},{"name":"regulation of bile acid formation","type":"exact"},{"name":"regulation of bile acid synthesis","type":"exact"}],"termid":"GO:0070857"}


id: PBO:0048186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABARAPL1 antisense RNA 1","termid":"PBO:0048186"}


id: PBO:0036025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NEDD8-specific_protease_activity","termid":"PBO:0036025"}


id: MONDO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anodontia","termid":"MONDO:0008797"},{"relation_name":"is_a","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microdontia hypodontia short stature","secondary_identifiers":["MEDGEN:419435","UMLS:C2931532","MESH:C537553","GARD:3638"],"synonyms":[{"name":"microdontia, hypodontia, short bulbous roots and root canals with strabismus, short stature, and borderline mentality","type":"related"}],"termid":"MONDO:0043141","xrefs":{"Monarch":{"xref_id":"0043141"}}}


id: PBO:0017077
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P cleavage specifity not affected by sequences flanking the G+1 cleavage site","termid":"PBO:0017077"}


id: GO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen transcytosis carried out by M cells in the mucosal-associated lymphoid tissue (MALT). Transcytosis is the process of the directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side. M cells are specialized epithelia cells with a microfold structure that are adept at moving antigens from the gut lumen to antigen presenting cells in the MALT.","definition_xrefs":["ISBN:0781735149","GOC:jal","PMID:12843411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcytosis","termid":"GO:0045056"},{"relation_name":"part_of","term_name":"antigen sampling by M cells in mucosal-associated lymphoid tissue","termid":"GO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"antigen transcytosis by M cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen transcytosis by M cells in MALT","type":"exact"},{"name":"antigen transport by M cells in MALT","type":"exact"},{"name":"antigen transport by M cells in mucosal-associated lymphoid tissue","type":"exact"}],"termid":"GO:0002412"}


id: GO:0007253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The selective interaction of the transcription factor NF-kappaB with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of NF-kappaB (obsolete GO:0007253)","synonyms":[{"name":"cytoplasmic NF-kappaB retention","type":"exact"},{"name":"cytoplasmic NF-kappaB sequestration","type":"exact"},{"name":"cytoplasmic NF-kappaB storage","type":"exact"},{"name":"cytoplasmic retention of NF-kappaB","type":"exact"},{"name":"cytoplasmic sequestration of NF-kappaB","type":"exact"},{"name":"cytoplasmic storage of NF-kappaB","type":"exact"},{"name":"maintenance of NF-kappaB location in cytoplasm","type":"exact"}],"termid":"GO:0007253"}


id: GO:0030401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to prevent the termination of RNA synthesis. Acts as a regulatory device, e.g. in phage lambda, enabling a terminator to be masked from RNA polymerase so that distal genes can be expressed.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription antiterminator activity (obsolete GO:0030401)","synonyms":[{"name":"transcription antiterminator activity","type":"exact"},{"name":"transcriptional antiterminator activity","type":"exact"}],"termid":"GO:0030401"}


id: GO:0031942
data:
  {"annotated_genes":["SJAG_01816","SJAG_00354"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78897,120598],"is_not":false,"summary":null,"term":"GO:0031942"}]},"cv_name":"cellular_component","definition":"Protease complex of the mitochondrial inner membrane whose catalytic residues lie on the intermembrane space side of the inner membrane; involved in mitochondrial protein turnover. Contains a subunit belonging to the AAA family of ATP-dependent metalloproteases.","definition_xrefs":["PMID:16247555","PMID:16267274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"i-AAA complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031942","terms_by_termid":{"GO:0031942":null}}


id: MONDO:0001627
data:
  {"annotated_genes":["SJAG_01179","SJAG_16459","SJAG_01229","SJAG_01356","SJAG_05332","SJAG_04489","SJAG_02377","SJAG_05277","SJAG_01438","SJAG_03052","SJAG_02084","SJAG_00087","SJAG_00421","SJAG_02885","SJAG_02716","SJAG_02518","SJAG_01317","SJAG_00115","SJAG_03692","SJAG_03345","SJAG_02119","SJAG_02196","SJAG_03866","SJAG_04757","SJAG_00686","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[87911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[88175,88174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[87192,87193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008695"},{"annotations":[88490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[87060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"},{"annotations":[88468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008178"},{"annotations":[88690,88691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[88676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[87370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"},{"annotations":[88870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[87579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[87731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[87417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[86982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[87495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[89034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[86932,86933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[86918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[87379,87380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[87575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[88031,88032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[88921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"}]},"cv_name":"mondo","definition":"Loss of intellectual abilities interfering with an individual's social and occupational functions. Causes include Alzheimer's disease, brain injuries, brain tumors, and vascular disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognitive disorder","termid":"MONDO:0002039"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00115":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00686":null,"SJAG_01179":null,"SJAG_01229":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01438":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02377":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02885":null,"SJAG_03052":null,"SJAG_03345":null,"SJAG_03692":null,"SJAG_03866":null,"SJAG_04489":null,"SJAG_04757":null,"SJAG_05277":null,"SJAG_05332":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"dementia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D003704","UMLS:C0497327","ICD9:290.8","icd11.foundation:546689346","DOID:1307","SCTID:52448006","ICD9:294.8","HP:0000726","ICD9:294.1","MEDGEN:99229","NCIT:C4786"],"synonyms":[{"name":"dementia","type":"exact"},{"name":"dementia (disease)","type":"exact"}],"termid":"MONDO:0001627","terms_by_termid":{"MONDO:0007574":null,"MONDO:0008083":null,"MONDO:0008178":null,"MONDO:0008458":null,"MONDO:0008695":null,"MONDO:0008767":null,"MONDO:0010476":null,"MONDO:0010936":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011439":null,"MONDO:0011706":null,"MONDO:0011781":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0013501":null,"MONDO:0013584":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014290":null,"MONDO:0014417":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0033482":null,"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0001627"}}}


id: SO:0001810
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that mediates binding to PCNA. The consensus sequence is QXX(hh)XX(aa), where (h) denotes residues with moderately hydrophobic side chains and (a) denotes residues with highly hydrophobic aromatic side chains.","definition_xrefs":["PMID:9631646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_protein_contact","termid":"SO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"PIP_box","synonyms":[{"name":"PIP box","type":"exact"}],"termid":"SO:0001810"}


id: MONDO:0019147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The infection of a fly larva (maggot) in human tissue, which most commonly occurs in tropical climates. Affected tissues most commonly include skin, especially if open wounds are present, nasal passages, ears, and eyes.","definition_xrefs":["NCIT:C128400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"myiasis","secondary_identifiers":["UMLS:C0027030","ICD10CM:B87","DOID:11080","MedDRA:10028586","GARD:18924","ICD9:134.0","MEDGEN:10148","MESH:D009198","Orphanet:75110","SCTID:60412004","icd11.foundation:1367149207","EFO:0007389"],"synonyms":[{"name":"infestation by fly larvae","type":"exact"},{"name":"infestation by maggots","type":"exact"},{"name":"maggot infestation","type":"exact"},{"name":"myiasis, unspecified","type":"exact"}],"termid":"MONDO:0019147","xrefs":{"Monarch":{"xref_id":"0019147"}}}


id: MONDO:0023030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism cleft palate loose skin","termid":"MONDO:0023030","xrefs":{"Monarch":{"xref_id":"0023030"}}}


id: PBO:0042101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 172","termid":"PBO:0042101"}


id: FYPO:0005249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caesium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to caesium","synonyms":[{"name":"resistance to caesium during mitotic cell cycle","type":"related"},{"name":"resistance to caesium during vegetative growth","type":"exact"},{"name":"resistance to caesium ions","type":"exact"},{"name":"resistance to cesium","type":"exact"},{"name":"resistant to caesium","type":"exact"}],"termid":"FYPO:0005249"}


id: GO:1903930
data:
  {"annotated_genes":["SJAG_04712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903931"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyrimidine-containing compound salvage.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of pyrimidine salvage","type":"related"}],"termid":"GO:1903930","terms_by_termid":{"GO:1903931":null}}


id: MONDO:0010591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fingerprint body myopathy is a congenital benign muscle disorder characterized by congenital hypotonia and weakness and by the presence of numerous fingerprint bodies located at the periphery of the muscle fibers. Prevalence is unknown. Less than 20 patients have been described. Few sporadic cases have been observed, as well as cases of recessive transmission.","definition_xrefs":["Orphanet:97232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"fingerprint body myopathy","secondary_identifiers":["GARD:12720","MEDGEN:337026","icd11.foundation:1251733531","OMIM:305550","MESH:C564425","UMLS:C1844560"],"synonyms":[{"name":"fingerprint body myopathy","type":"exact"}],"termid":"MONDO:0010591","xrefs":{"Monarch":{"xref_id":"0010591"}}}


id: GO:1900234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Kit signaling pathway.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"Kit signaling pathway","termid":"GO:0038109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Kit signaling pathway","synonyms":[{"name":"regulation of Kit signalling pathway","type":"exact"},{"name":"regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"regulation of stem cell factor signaling pathway","type":"exact"}],"termid":"GO:1900234"}


id: MONDO:0007175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR interval, variation in","secondary_identifiers":["MEDGEN:463601","UMLS:C3152251","OMIM:108980"],"synonyms":[{"name":"Atrioventricular conduction time, variation in","type":"related"},{"name":"PR interval, variation in","type":"exact"},{"name":"PR interval, variation type in","type":"exact"}],"termid":"MONDO:0007175","xrefs":{"Monarch":{"xref_id":"0007175"}}}


id: PBO:0060558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 2","termid":"PBO:0060558"}


id: SO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element II (CDEII) is part a conserved region of the centromere, consisting of a consensus region that is AT-rich and ~ 75-100 bp in length.","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_II","synonyms":[{"name":"CDEII","type":"exact"},{"name":"centromere DNA Element II","type":"exact"}],"termid":"SO:0001494"}


id: MONDO:1010262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, non-human animal","secondary_identifiers":["OMIA:000807"],"termid":"MONDO:1010262","xrefs":{"Monarch":{"xref_id":"1010262"}}}


id: GO:0005427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a oligopeptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement.","definition_xrefs":["OMIM:600544","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"proton-dependent oligopeptide secondary active transmembrane transporter activity","synonyms":[{"name":"hydrogen/oligopeptide symporter","type":"related"},{"name":"proton-dependent oligopeptide transporter activity","type":"exact"}],"termid":"GO:0005427"}


id: MONDO:0015341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital panfollicular nevus is a rare, benign, skin tumor disorder characterized by the presence of congenital, large (few centimeters), elevated, well-circumscribed, pink-tan, multinodular, non-ulcerative, bosselated-surface skin lesions located on the neck, scalp or hand and which enlarge with time. Histologically, hamartomatous proliferation containing irregularly arranged, malformed hair follicles in various stages of development, surrounded by fibrous tissue and densely distributed within the dermis is observed.","definition_xrefs":["Orphanet:139414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital panfollicular nevus","secondary_identifiers":["HP:0025471","GARD:19912","MEDGEN:1381094","UMLS:C4476799"],"synonyms":[{"name":"congenital panfollicular nevus","type":"exact"},{"name":"congenital panfollicular nevus (disease)","type":"exact"}],"termid":"MONDO:0015341","xrefs":{"Monarch":{"xref_id":"0015341"}}}


id: FYPO:0003795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucan level","termid":"FYPO:0001196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell wall alpha-glucan level","synonyms":[{"name":"normal cell wall alpha-D-glucan level","type":"exact"},{"name":"normal cell wall alpha-glucan accumulation","type":"related"},{"name":"normal cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0003795"}


id: MONDO:0022610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis oligospermia","termid":"MONDO:0022610","xrefs":{"Monarch":{"xref_id":"0022610"}}}


id: GO:0097281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to an immune complex. Immune complexes are clusters of antibodies bound to antigen, to which complement may also be fixed, and which may precipitate or remain in solution. Examples are the clumping of cells such as bacteria or red blood cells in the presence of an antibody, precipitation of a toxin after an antibody binds to it, and clumping of viral particles as a result of antibody binding to the virus.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex formation","synonyms":[{"name":"antibody-mediated agglutination","type":"exact"}],"termid":"GO:0097281"}


id: PBO:0108913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG2 cohesin complex component","termid":"PBO:0108913"}


id: MONDO:0008410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by osteochondrosis of the vertebral epiphyses in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"},{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scheuermann disease","secondary_identifiers":["Orphanet:3135","ICD9:732.0","DOID:13300","NCIT:C34999","SCTID:53406005","OMIM:181440","MESH:D012544","MEDGEN:19885","UMLS:C0036310"],"synonyms":[{"name":"Calve's disease","type":"exact"},{"name":"Scheuermann disease","type":"exact"},{"name":"Scheuermann juvenile kyphosis","type":"related"},{"name":"Scheuermann kyphosis","type":"related"},{"name":"Scheuermann's disease","type":"exact"},{"name":"Scheuermann's kyphosis","type":"exact"},{"name":"Sherman's disease","type":"exact"},{"name":"familial Scheuermann disease","type":"related"},{"name":"familial Scheuermann juvenile kyphosis","type":"exact"},{"name":"familial spinal osteochondrosis","type":"exact"},{"name":"juvenile kyphosis","type":"related"},{"name":"juvenile osteochondritis of the spine","type":"exact"},{"name":"juvenile osteochondrosis of Scheurermann","type":"exact"},{"name":"juvenile osteochondrosis of spine","type":"exact"},{"name":"spinal Osteochondrosis","type":"related"}],"termid":"MONDO:0008410","xrefs":{"Monarch":{"xref_id":"0008410"}}}


id: PBO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YOR212W is not functional ortholog","termid":"PBO:0003635"}


id: PBO:0073067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 4 pseudogene","termid":"PBO:0073067"}


id: PBO:0049260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSC divergent transcript","termid":"PBO:0049260"}


id: GO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ganglioside metabolic process","synonyms":[{"name":"ganglioside metabolism","type":"exact"}],"termid":"GO:0001573"}


id: MONDO:0014736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the MORC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2Z","secondary_identifiers":["MEDGEN:1800448","DOID:0110181","UMLS:C5569025","OMIM:616688","Orphanet:466768","GARD:17829"],"synonyms":[{"name":"CMT2Z","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in MORC2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2Z","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2Z","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2z","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2Z","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2Z","type":"related"},{"name":"MORC2 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to MORC2 mutation","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2Z","type":"related"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2Z","type":"exact"}],"termid":"MONDO:0014736","xrefs":{"Monarch":{"xref_id":"0014736"}}}


id: GO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a butyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete O-butanoyltransferase activity (obsolete GO:0034323)","termid":"GO:0034323"}


id: GO:0070971
data:
  {"annotated_genes":["SJAG_05345","SJAG_02539","SJAG_05344","SJAG_00072","SJAG_03153","SJAG_00906","SJAG_03558","SJAG_02349","SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73026,73147,76521,76875,77320,78210,78785,79884,80149],"is_not":false,"summary":null,"term":"GO:0070971"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum part at which COPII-coated vesicles are produced.","definition_xrefs":["NIF_Subcellular:sao124393998","PMID:15623529","PMID:16957052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00906":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"endoplasmic reticulum exit site","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ER exit site","type":"exact"},{"name":"transitional ER","type":"exact"}],"termid":"GO:0070971","terms_by_termid":{"GO:0070971":null}}


id: GO:0120047
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100212],"is_not":false,"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to a medial cortical node.","definition_xrefs":["PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to medial cortex","termid":"GO:0106012"},{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortical node","termid":"GO:0120046"},{"relation_name":"positively_regulates","term_name":"protein localization to medial cortical node","termid":"GO:1902577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120047","terms_by_termid":{"GO:0120047":null}}


id: GO:0001962
data:
  {"annotated_genes":["SJAG_03149","SJAG_03150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112535,112541],"is_not":false,"summary":null,"term":"GO:0001962"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["PMID:10854427","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoglobotriaosylceramide synthase","type":"narrow"}],"termid":"GO:0001962","terms_by_termid":{"GO:0001962":null}}


id: PBO:0043669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B pseudogene 1","termid":"PBO:0043669"}


id: PATO:0001625
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functional quality held by the bearer when the latter exhibits increased ability to perform a regular function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functional","termid":"PATO:0001510"},{"relation_name":"is_a","term_name":"having extra function","termid":"PATO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased functionality","synonyms":[{"name":"high functionality","type":"exact"}],"termid":"PATO:0001625"}


id: GO:0042251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized larval imaginal disc epithelium.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0016336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0042251"}


id: GO:0072293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the metanephric nephron acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in metanephric nephron development","termid":"GO:0072272"},{"relation_name":"part_of","term_name":"metanephric nephron tubule formation","termid":"GO:0072289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"}


id: GO:0051238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of binding or confining metal ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of metal ion (obsolete GO:0051238)","synonyms":[{"name":"metal ion retention","type":"exact"},{"name":"metal ion sequestering","type":"exact"},{"name":"metal ion sequestration","type":"exact"},{"name":"metal ion storage","type":"exact"},{"name":"retention of metal ion","type":"exact"},{"name":"sequestration of metal ion","type":"exact"},{"name":"storage of metal ion","type":"exact"}],"termid":"GO:0051238"}


id: FYPO:0001144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is lower than normal. Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PomBase:mah","CHEBI:64052","PMID:12686557","CHEBI:64048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased Man8GlcNAc level","synonyms":[{"name":"decreased Man8GlcNAc accumulation","type":"related"},{"name":"decreased Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"decreased Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"decreased Man8GlcNAc2 level","type":"exact"},{"name":"decreased cellular Man8GlcNAc level","type":"exact"},{"name":"reduced Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001144"}


id: MONDO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated restrictive cardiomyopathy in which the cause of the disease is a mutation in the TNNI3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 1","secondary_identifiers":["GARD:18070","MESH:C566168","MEDGEN:396236","DOID:0111425","UMLS:C1861861","OMIM:115210"],"synonyms":[{"name":"RCM1","type":"related"},{"name":"Rcm","type":"related"},{"name":"TNNI3 familial isolated restrictive cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 1","type":"exact"},{"name":"cardiomyopathy, familial restrictive, type 1","type":"exact"},{"name":"familial isolated restrictive cardiomyopathy caused by mutation in TNNI3","type":"exact"}],"termid":"MONDO:0007270","xrefs":{"Monarch":{"xref_id":"0007270"}}}


id: MONDO:0006732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal movements, including hyperkinesis; hypokinesia; tremor; and dystonia, associated with the use of certain medications or drugs. Muscles of the face, trunk, neck, and extremities are most commonly affected. Tardive dyskinesia refers to abnormal hyperkinetic movements of the muscles of the face, tongue, and neck associated with the use of neuroleptic agents (see antipsychotic agents). (Adams et al., Principles of Neurology, 6th ed, p1199)","definition_xrefs":["MESH:D004409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced dyskinesia","secondary_identifiers":["ICD9:333.99","UMLS:C0013386","MEDGEN:3935","SCTID:102448004","EFO:1000904","MedDRA:10013916"],"termid":"MONDO:0006732","xrefs":{"Monarch":{"xref_id":"0006732"}}}


id: GO:1905344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prostaglandin.","definition_xrefs":["GO_REF:0000068","GOC:BHF","PMID:25290914","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid catabolic process","termid":"GO:0062232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostaglandin catabolic process","synonyms":[{"name":"prostaglandin breakdown","type":"exact"},{"name":"prostaglandin catabolism","type":"exact"},{"name":"prostaglandin degradation","type":"exact"}],"termid":"GO:1905344"}


id: PBO:0078867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 2","termid":"PBO:0078867"}


id: MONDO:0019337
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"An autoimmune disease characterized by blisters on the skin.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune bullous skin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842418","ICD9:694.9","EFO:0008598","GARD:19028","Orphanet:79669","SCTID:7231009","UMLS:C5681494","DOID:8502","ICD9:694.8"],"synonyms":[{"name":"bullous dermatosis","type":"related"},{"name":"bullous skin disease","type":"broad"}],"termid":"MONDO:0019337","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0019337"}}}


id: GO:0010877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipids into cells that is part of their accumulation and maintenance.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"part_of","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipid transport involved in lipid storage","termid":"GO:0010877"}


id: MONDO:0007224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly type E","termid":"MONDO:0019677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, type E, with atrial septal defect, type 2","secondary_identifiers":["UMLS:C1862101","OMIM:113301","MESH:C566193","MEDGEN:354662"],"synonyms":[{"name":"brachydactyly, type E, with atrial septal defect, type II","type":"related"}],"termid":"MONDO:0007224","xrefs":{"Monarch":{"xref_id":"0007224"}}}


id: MONDO:0002730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney neoplasm that occurs during childhood.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"childhood kidney neoplasm","secondary_identifiers":["UMLS:C1333003","NCIT:C6563","DOID:3675","MEDGEN:232356"],"synonyms":[{"name":"childhood kidney neoplasm","type":"exact"},{"name":"childhood kidney tumor","type":"exact"},{"name":"childhood kidney tumour","type":"exact"},{"name":"childhood renal neoplasm","type":"exact"},{"name":"childhood renal tumor","type":"exact"},{"name":"childhood renal tumour","type":"exact"},{"name":"kidney neoplasm","type":"broad"},{"name":"kidney neoplasm of childhood","type":"exact"},{"name":"paediatric kidney neoplasm","type":"exact"},{"name":"paediatric kidney tumour","type":"exact"},{"name":"paediatric renal neoplasm","type":"exact"},{"name":"paediatric renal tumour","type":"exact"},{"name":"pediatric kidney neoplasm","type":"exact"},{"name":"pediatric kidney tumor","type":"exact"},{"name":"pediatric renal neoplasm","type":"exact"},{"name":"pediatric renal tumor","type":"exact"}],"termid":"MONDO:0002730","xrefs":{"Monarch":{"xref_id":"0002730"}}}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: GO:1904098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein O-linked glycosylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24509081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"protein O-linked glycosylation","termid":"GO:0006493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein O-linked glycosylation","synonyms":[{"name":"regulation of protein amino acid O-linked glycosylation","type":"exact"}],"termid":"GO:1904098"}


id: MONDO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any abnormality, anatomical or biochemical, evident at birth or during the neonatal period.","definition_xrefs":["NCIT:C2849"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital abnormality (obsolete MONDO:0000839)","secondary_identifiers":["MESH:D000013","SCTID:276654001","NANDO:1200957","DOID:0080015","ICD9:759.89","ICD9:759.9"],"synonyms":[{"name":"CM - congenital malformation","type":"related"},{"name":"SCONG","type":"exact"},{"name":"birth defect","type":"exact"},{"name":"congenital Abnormality","type":"exact"},{"name":"congenital abnormality","type":"exact"},{"name":"congenital anatomic Abnormality","type":"exact"},{"name":"congenital anatomical Abnormality","type":"exact"},{"name":"congenital anomalies of fetus","type":"exact"},{"name":"congenital anomaly","type":"exact"},{"name":"congenital anomaly or birth defect","type":"exact"},{"name":"congenital defect","type":"exact"},{"name":"congenital defect/deformity","type":"exact"},{"name":"congenital deformity","type":"exact"},{"name":"congenital malformation","type":"exact"},{"name":"defect/deformity, Congenital","type":"exact"},{"name":"defect/deformity, congenital","type":"exact"},{"name":"deformity/defect, Congenital","type":"exact"},{"name":"fetal developmental abnormality","type":"related"},{"name":"fetal malformation","type":"related"},{"name":"physical disorder","type":"exact"}],"termid":"MONDO:0000839","xrefs":{"Monarch":{"xref_id":"0000839"}}}


id: MONDO:0011942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus with nephritis, susceptibility to, 1","secondary_identifiers":["MEDGEN:335794","OMIM:607965","UMLS:C1842757"],"synonyms":[{"name":"SLEN1","type":"exact"},{"name":"systemic lupus erythematosus with nephritis, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0011942","xrefs":{"Monarch":{"xref_id":"0011942"}}}


id: MONDO:0044240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Perfect pitch, or absolute pitch (AP), is defined as the ability immediately and effortlessly to name a note or collection of notes when they are sounded. Often, persons with perfect pitch possess a memory capacity whereby they can remember the pitch of a note and the configuration of a group or series of notes after a significant interval of time has elapsed. These recognitive and memory talents involve a potential capacity for performing these functions together with a practice factor which is necessary for the maintenance of the skills at the highest level (summary by {12:Profita and Bidder, 1988}). Absolute pitch likely results from a combination of environmental and genetic factors ({16:Theusch et al., 2009}).","definition_xrefs":["OMIM:159300"],"gene_count":0,"genotype_count":0,"name":"obsolete musical perfect pitch (obsolete MONDO:0044240)","synonyms":[{"name":"absolute pitch","type":"related"},{"name":"musical perfect pitch","type":"related"}],"termid":"MONDO:0044240","xrefs":{"Monarch":{"xref_id":"0044240"}}}


id: MONDO:0015433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 17 syndrome is a rare chromosomal anomaly syndrome, resulting from partial deletion of chromosome 17, characterized by highly variable manifestations, ranging from a severe phenotype which presents with lissencephaly and severe intellectual disability to a milder phenotype that includes short stature, microcephaly, intellectual disability, seizures (that may be pharmacoresistant), café-au-lait spots, retinal flecks and minor facial dysmorphism, depending on the presence or absence of the Miller-Dieker critical region.","definition_xrefs":["Orphanet:1441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 17 disorder","termid":"MONDO:0020583"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 17","secondary_identifiers":["MESH:C538046","MEDGEN:419477","GARD:4724","UMLS:C2931714"],"synonyms":[{"name":"R17","type":"related"},{"name":"Ring 17","type":"related"},{"name":"Ring chromosome 17 syndrome","type":"related"},{"name":"Ring chromosome type 17","type":"exact"},{"name":"chromosome 17 ring","type":"related"}],"termid":"MONDO:0015433","xrefs":{"Monarch":{"xref_id":"0015433"}}}


id: MONDO:0020719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete susceptibility to Hirschsprung disease (obsolete MONDO:0020719)","synonyms":[{"name":"HSCR","type":"related"}],"termid":"MONDO:0020719","xrefs":{"Monarch":{"xref_id":"0020719"}}}


id: PBO:0063532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1 pseudogene 1","termid":"PBO:0063532"}


id: MONDO:0008983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal instability with tissue-specific radiosensitivity","secondary_identifiers":["MEDGEN:347797","MESH:C565848","OMIM:215510","UMLS:C1859091"],"synonyms":[{"name":"chromosomal instability with tissue-specific radiosensitivity","type":"exact"}],"termid":"MONDO:0008983","xrefs":{"Monarch":{"xref_id":"0008983"}}}


id: PBO:0057382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ax","termid":"PBO:0057382"}


id: GO:1903818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19219384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of voltage-gated potassium channel activity","synonyms":[{"name":"activation of voltage gated potassium channel activity","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:1903818"}


id: MONDO:0016509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcornea-posterior megalolenticonus-persistent fetal vasculature-coloboma syndrome","secondary_identifiers":["Orphanet:231736","MEDGEN:1667341","GARD:10938","UMLS:C4751163"],"synonyms":[{"name":"MPPC syndrome","type":"exact"},{"name":"microcornea posterior megalolenticonus persistent fetal vasculature coloboma","type":"related"},{"name":"microcornea posterior megalolenticonus persistent foetal vasculature coloboma","type":"related"}],"termid":"MONDO:0016509","xrefs":{"Monarch":{"xref_id":"0016509"}}}


id: GO:0004457
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004458"},{"annotations":[82099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008720"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: lactate + NAD+ = H+ + NADH + pyruvate.","definition_xrefs":["GOC:bf","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"lactate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004457","terms_by_termid":{"GO:0004458":null,"GO:0008720":null}}


id: GO:1901523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of icosanoid.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"icosanoid catabolic process","synonyms":[{"name":"icosanoid breakdown","type":"exact"},{"name":"icosanoid catabolism","type":"exact"},{"name":"icosanoid degradation","type":"exact"}],"termid":"GO:1901523"}


id: FYPO:0004269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is abnormal; may result in the formation of chains of attached cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell septum edging catabolic process","synonyms":[{"name":"abnormal cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"abnormal cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"abnormal cell septum edging catabolism","type":"exact"},{"name":"abnormal cell septum edging hydrolysis","type":"exact"},{"name":"chained cells","type":"related"}],"termid":"FYPO:0004269"}


id: PBO:0054359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1752","termid":"PBO:0054359"}


id: GO:1902693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of superoxide dismutase activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","GOC:TermGenie","PMID:10026301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"superoxide dismutase complex","termid":"GO:1902693"}


id: MONDO:0032651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrosis, neurodegeneration, and cerebral angiomatosis","secondary_identifiers":["OMIM:618278","UMLS:C4748939","MEDGEN:1648312"],"synonyms":[{"name":"FIBROSIS, NEURODEGENERATION, AND CEREBRAL ANGIOMATOSIS","type":"related"},{"name":"FINCA","type":"related"},{"name":"FINCA syndrome","type":"exact"}],"termid":"MONDO:0032651","xrefs":{"Monarch":{"xref_id":"0032651"}}}


id: PATO:0001040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001040 relative ratio (obsolete PATO:0001040)","termid":"PATO:0001040"}


id: SO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_downstream_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Seattleseq:near-gene-3","type":"exact"}],"termid":"SO:0002083"}


id: GO:1901797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of signal transduction by p53 class mediator","synonyms":[{"name":"down regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of signal transduction by p53 class mediator","type":"exact"},{"name":"inhibition of signal transduction by p53 class mediator","type":"narrow"}],"termid":"GO:1901797"}


id: PBO:0088090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:sterol glucosyltransferase; conserved enzyme involved in synthesis of sterol glucoside membrane lipids; in contrast to ATG26 from P. pastoris, S. cerevisiae ATG26 is not involved in autophagy","termid":"PBO:0088090"}


id: PBO:0074300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1 homolog A, structure-specific endonuclease subunit","termid":"PBO:0074300"}


id: PBO:0084357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lectin-like protein with similarity to Flo1p; thought to be expressed and involved in flocculation","termid":"PBO:0084357"}


id: FYECO:0000375
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which streptonigrin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ streptonigrin","termid":"FYECO:0000375"}


id: PBO:0059814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 40","termid":"PBO:0059814"}


id: GO:0043876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threonine (or D-allo-threonine) = glycine + acetaldehyde.","definition_xrefs":["MetaCyc:4.1.2.42-RXN","PMID:9642221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-threonine aldolase activity","secondary_identifiers":["EC:4.1.2.42"],"synonyms":[{"name":"D-TA","type":"exact"},{"name":"D-allo-TA","type":"exact"},{"name":"D-allo-threonine aldolase activity","type":"exact"},{"name":"DtaAS","type":"related"},{"name":"low-specificity D-threonine aldolase","type":"narrow"}],"termid":"GO:0043876"}


id: PBO:0079120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific 10","termid":"PBO:0079120"}


id: PBO:0039762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APRG1 tumor suppressor candidate","termid":"PBO:0039762"}


id: PBO:0077819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 regulating kinase","termid":"PBO:0077819"}


id: GO:0075063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive hypha growth (obsolete GO:0075063)","synonyms":[{"name":"positive regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"positive regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075063"}


id: PATO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keel-shaped","termid":"PATO:0002522"}


id: MONDO:0013066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 3","secondary_identifiers":["GARD:15598","MEDGEN:483746","NANDO:1200405","OMIM:612965","DOID:0111772","UMLS:C3489793"],"synonyms":[{"name":"46,XY SEX reversal 3","type":"related"},{"name":"46,XY Sex reversal type 3","type":"exact"},{"name":"46,XY Sex reversal, partial or complete, Nr5A1-related","type":"related"},{"name":"46,XY gonadal dysgenesis, partial or complete, with or without adrenal failure","type":"related"},{"name":"46,XY sex reversal 3","type":"exact"},{"name":"46XY sex reversal 3","type":"exact"},{"name":"SRXY3","type":"related"},{"name":"Sex reversal, XY, with or without adrenal failure","type":"related"},{"name":"disorder of Sex development, 46,XY, Nr5A1-related","type":"related"}],"termid":"MONDO:0013066","xrefs":{"Monarch":{"xref_id":"0013066"}}}


id: PBO:0039115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha hemoglobin stabilizing protein","termid":"PBO:0039115"}


id: GO:0031101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of fin tissue following its loss or destruction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fin regeneration","termid":"GO:0031101"}


id: PBO:0082034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory particle lid subcomplex component; role in Ub-dependent proteolysis and proteasome stability; involved in TREX-2 mediated mRNA export, and in the prevention of transcription-associated genome instability; ubiquitinated by Nedd4-like E3-ligase, Rsp5p; human ortholog DSS1, a BRCA1 binding protein implicated in cancer, complements the yeast null; drives trinucleotide repeat expansion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082034"}


id: MOD:01386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 3-hydroxy-L-valine.","definition_xrefs":["RESID:AA0463","ChEBI:141793","PubMed:7328054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-valine","synonyms":[{"name":"(2S)-2-amino-3-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"3-hydroxy-L-valine","type":"exact"},{"name":"3-hydroxyvaline","type":"exact"},{"name":"3HyVal","type":"exact"},{"name":"MOD_RES 3-hydroxyvaline","type":"exact"}],"termid":"MOD:01386"}


id: PBO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A1","termid":"PBO:0047769"}


id: MONDO:0007900
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88206],"is_not":false,"summary":null,"term":"MONDO:0007900"}]},"cv_name":"mondo","definition":"Any inherited isolated nail anomaly in which the cause of the disease is a mutation in the PLCD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pachyonychia congenita","termid":"MONDO:0016471"},{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537289","SCTID:74102009","DOID:0080081","MEDGEN:107463","ICD9:703.8","OMIM:151600","UMLS:C0544855","GARD:2555"],"synonyms":[{"name":"Gorlin Bushkell Jensen syndrome","type":"related"},{"name":"NDNC3","type":"related"},{"name":"PLCD1 inherited isolated nail anomaly","type":"exact"},{"name":"inherited isolated nail anomaly caused by mutation in PLCD1","type":"exact"},{"name":"leukonychia Striatus","type":"related"},{"name":"leukonychia punctata","type":"related"},{"name":"leukonychia totalis and/or partialis","type":"related"},{"name":"leukonychia totalis multiple sebaceous cysts renal calculi","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 3, (leukonychia)","type":"exact"},{"name":"nail disorder, nonsyndromic congenital, type 3","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 3","type":"exact"},{"name":"porcelain nails","type":"related"}],"termid":"MONDO:0007900","terms_by_termid":{"MONDO:0007900":null},"xrefs":{"Monarch":{"xref_id":"0007900"}}}


id: MONDO:0007136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anorectal malformation","termid":"MONDO:0019938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary anorectal anomalies","secondary_identifiers":["MEDGEN:501217","MESH:C567938","OMIM:107100","UMLS:C3495676"],"synonyms":[{"name":"anorectal anomalies","type":"related"},{"name":"genetic anorectal anomalies","type":"exact"}],"termid":"MONDO:0007136","xrefs":{"Monarch":{"xref_id":"0007136"}}}


id: PBO:0034470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_periphery","termid":"PBO:0034470"}


id: PBO:0030030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_shmoo_formation","termid":"PBO:0030030"}


id: PBO:0030363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030363"}


id: GO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + malonyl-CoA = N-malonylanthranilate + CoA.","definition_xrefs":["RHEA:17557","EC:2.3.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"anthranilate N-malonyltransferase activity","secondary_identifiers":["MetaCyc:ANTHRANILATE-N-MALONYLTRANSFERASE-RXN","KEGG_REACTION:R00989"],"synonyms":[{"name":"malonyl-CoA:anthranilate N-malonyltransferase activity","type":"related"}],"termid":"GO:0047673"}


id: GO:0035965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of premature (de novo synthesized) cardiolipin (1,3-bis(3-phosphatidyl)glycerol), through sequential deacylation and re-acylation reactions, to generate mature cardiolipin containing high-levels of unsaturated fatty acids.","definition_xrefs":["GOC:bf","GOC:rb","PMID:19244244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cardiolipin acyl-chain remodeling","secondary_identifiers":["Reactome:R-HSA-1482798"],"synonyms":[{"name":"cardiolipin acyl-chain remodelling","type":"exact"},{"name":"cardiolipin maturation","type":"broad"},{"name":"diphosphatidylglycerol remodeling","type":"related"}],"termid":"GO:0035965"}


id: MONDO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of familial hypoaldosteronism characterized by early infantile onset of vomiting, diarrhea, severe dehydration, and failure to thrive. Analysis of plasma electrolytes shows hyponatremia, hyperkalemia, and acidosis. Plasma renin activity is elevated, and aldosterone levels are low.","definition_xrefs":["Orphanet:556030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"familial hypoaldosteronism","termid":"MONDO:0018541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset familial hypoaldosteronism","secondary_identifiers":["ICD10CM:E27.4","UMLS:C5680171","MEDGEN:1842560","GARD:22243"],"synonyms":[{"name":"Early-onset familial hyperreninemic hypoaldosteronism","type":"exact"},{"name":"Severe aldosterone synthase deficiency","type":"exact"}],"termid":"MONDO:0035320","xrefs":{"Monarch":{"xref_id":"0035320"}}}


id: GO:1904025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["PMID:20935145","GO_REF:0000058","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"regulation of glucose catabolic process to lactate via pyruvate","termid":"GO:1904023"},{"relation_name":"positively_regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"activation of glucose catabolic process to lactate via pyruvate","type":"narrow"},{"name":"activation of glucose fermentation to lactate via pyruvate","type":"narrow"},{"name":"activation of homofermentation","type":"narrow"},{"name":"activation of homofermentative lactate fermentation","type":"narrow"},{"name":"activation of homofermentative pathway","type":"narrow"},{"name":"activation of homolactate fermentation","type":"narrow"},{"name":"activation of homolactic fermentation","type":"narrow"},{"name":"positive regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"positive regulation of homofermentation","type":"exact"},{"name":"positive regulation of homofermentative lactate fermentation","type":"exact"},{"name":"positive regulation of homofermentative pathway","type":"exact"},{"name":"positive regulation of homolactate fermentation","type":"exact"},{"name":"positive regulation of homolactic fermentation","type":"exact"},{"name":"up regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"up regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"up regulation of homofermentation","type":"exact"},{"name":"up regulation of homofermentative lactate fermentation","type":"exact"},{"name":"up regulation of homofermentative pathway","type":"exact"},{"name":"up regulation of homolactate fermentation","type":"exact"},{"name":"up regulation of homolactic fermentation","type":"exact"},{"name":"up-regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"up-regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"up-regulation of homofermentation","type":"exact"},{"name":"up-regulation of homofermentative lactate fermentation","type":"exact"},{"name":"up-regulation of homofermentative pathway","type":"exact"},{"name":"up-regulation of homolactate fermentation","type":"exact"},{"name":"up-regulation of homolactic fermentation","type":"exact"},{"name":"upregulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"upregulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"upregulation of homofermentation","type":"exact"},{"name":"upregulation of homofermentative lactate fermentation","type":"exact"},{"name":"upregulation of homofermentative pathway","type":"exact"},{"name":"upregulation of homolactate fermentation","type":"exact"},{"name":"upregulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904025"}


id: MONDO:0700073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple acyl-CoA dehydrogenase deficiency in which the cause of the disease is a mutation in the ETFA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple acyl-CoA dehydrogenase deficiency","termid":"MONDO:0009282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005267","MONDO:0004069"],"is_obsolete":false,"name":"glutaric acidemia IIa","secondary_identifiers":["MEDGEN:479784","UMLS:C3278154"],"synonyms":[{"name":"ETFA deficiency","type":"exact"},{"name":"GA2A","type":"exact"},{"name":"glutaric acidemia 2A","type":"exact"},{"name":"multiple acyl-CoA dehydrogenase deficiency caused by mutation in ETFA","type":"exact"}],"termid":"MONDO:0700073","xrefs":{"Monarch":{"xref_id":"0700073"}}}


id: PBO:0075854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 3","termid":"PBO:0075854"}


id: PBO:0059817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 43","termid":"PBO:0059817"}


id: PBO:0028241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_at_mitotic_G1/S_phase_transition","termid":"PBO:0028241"}


id: GO:0030550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an acetylcholine receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor inhibitor activity","termid":"GO:0030547"},{"relation_name":"is_a","term_name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"acetylcholine receptor inhibitor activity","termid":"GO:0030550"}


id: GO:0070195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that consists of two identical subunits and binds growth hormone.","definition_xrefs":["GOC:mah","GOC:vk","GOC:BHF","PMID:11445442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"growth hormone receptor complex","termid":"GO:0070195"}


id: PBO:0066120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 1","termid":"PBO:0066120"}


id: PBO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.1","termid":"PBO:0000165"}


id: PR:P17478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp202 gene.","definition_xrefs":["UniProtKB:P17478","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2-beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.15c","synonyms":[{"name":"A4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp202","type":"exact"}],"termid":"PR:P17478"}


id: MONDO:0020012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic or rheumatic disease (obsolete MONDO:0020012)","termid":"MONDO:0020012","xrefs":{"Monarch":{"xref_id":"0020012"}}}


id: PBO:0057952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3675","termid":"PBO:0057952"}


id: PBO:0060652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 1","termid":"PBO:0060652"}


id: SO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is moved.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_premature_start_codon_variant","termid":"SO:0001983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_UTR_premature_start_codon_location_variant","termid":"SO:0001990"}


id: PBO:0038297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0038297"}


id: MONDO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunoglobulin A deficiency (obsolete MONDO:0000048)","termid":"MONDO:0000048","xrefs":{"Monarch":{"xref_id":"0000048"}}}


id: MOD:01905
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0473"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"monohydroxylated proline","termid":"MOD:01024"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01905"}


id: PBO:0074451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival motor neuron domain containing 1","termid":"PBO:0074451"}


id: GO:0004910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-1 to initiate a change in cell activity by inhibiting the activity of type I interleukin receptors.","definition_xrefs":["PMID:15062641","PMID:18613828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor activity","termid":"GO:0004908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-1, type II, blocking receptor activity","secondary_identifiers":["GO:0019968"],"synonyms":[{"name":"IL-1 type II, blocking binding","type":"exact"},{"name":"IL-1 type II, blocking receptor","type":"exact"},{"name":"interleukin-1 blocking receptor activity","type":"exact"},{"name":"interleukin-1 type II receptor activity","type":"exact"},{"name":"interleukin-1, type II, blocking binding","type":"related"}],"termid":"GO:0004910"}


id: GO:2000575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of microtubule motor activity.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microtubule motor activity (obsolete GO:2000575)","synonyms":[{"name":"negative regulation of axonemal motor activity","type":"related"},{"name":"negative regulation of dynein","type":"related"},{"name":"negative regulation of dynein ATPase activity","type":"related"},{"name":"negative regulation of kinesin","type":"related"},{"name":"negative regulation of kinesin motor activity","type":"related"},{"name":"negative regulation of kinetochore motor activity","type":"related"}],"termid":"GO:2000575"}


id: PBO:0078690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-3","termid":"PBO:0078690"}


id: GO:1990208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the RNA levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12182338","PMID:18703740"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of RNA levels in host (obsolete GO:1990208)","termid":"GO:1990208"}


id: SO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, by shifting one base backward.","direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_frameshift_variant","synonyms":[{"name":"+1 frameshift variant","type":"exact"},{"name":"plus 1 frameshift variant","type":"exact"}],"termid":"SO:0001594"}


id: GO:1904945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt(II) acetate stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24315322","GOC:mr","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete response to cobalt(II) acetate (obsolete GO:1904945)","termid":"GO:1904945"}


id: GO:0060144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process occurring in the host cell that contributes to the process of posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete host cellular process involved in virus induced gene silencing (obsolete GO:0060144)","termid":"GO:0060144"}


id: PBO:0078407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 2-1","termid":"PBO:0078407"}


id: GO:1900544
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"positively_regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"positive regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of purine metabolic process","type":"narrow"},{"name":"activation of purine metabolism","type":"narrow"},{"name":"activation of purine nucleotide metabolic process","type":"narrow"},{"name":"activation of purine nucleotide metabolism","type":"narrow"},{"name":"positive regulation of purine metabolic process","type":"narrow"},{"name":"positive regulation of purine metabolism","type":"narrow"},{"name":"positive regulation of purine nucleotide metabolism","type":"exact"},{"name":"up regulation of purine metabolic process","type":"narrow"},{"name":"up regulation of purine metabolism","type":"narrow"},{"name":"up regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up regulation of purine nucleotide metabolism","type":"exact"},{"name":"up-regulation of purine metabolic process","type":"narrow"},{"name":"up-regulation of purine metabolism","type":"narrow"},{"name":"up-regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up-regulation of purine nucleotide metabolism","type":"exact"},{"name":"upregulation of purine metabolic process","type":"narrow"},{"name":"upregulation of purine metabolism","type":"narrow"},{"name":"upregulation of purine nucleotide metabolic process","type":"exact"},{"name":"upregulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900544","terms_by_termid":{"GO:1905857":null}}


id: PBO:0089749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex RNA-binding subunit","termid":"PBO:0089749"}


id: PBO:0042427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 11","termid":"PBO:0042427"}


id: GO:0071483
data:
  {"annotated_genes":["SJAG_02860","SJAG_05242"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[121261,121262],"is_not":false,"summary":null,"term":"GO:0071483"},{"annotations":[67540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02860":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to blue light","references_by_uniquename":{"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"cellular response to blue light stimulus","type":"exact"}],"termid":"GO:0071483","terms_by_termid":{"GO:0009785":null,"GO:0071483":null}}


id: GO:0031716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calcitonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"calcitonin receptor binding","synonyms":[{"name":"calcitonin receptor ligand","type":"narrow"}],"termid":"GO:0031716"}


id: MONDO:0017224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelizaeus-Merzbacher disease (PMD) in female carriers is the presentation of PMD in some women carrying mutations in the PLP1 gene (Xq22).","definition_xrefs":["Orphanet:280229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizeaus-Merzbacher spectrum disorder","termid":"MONDO:0010714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Pelizaeus-Merzbacher disease in female carriers","secondary_identifiers":["MEDGEN:1753109","GARD:21075","icd11.foundation:1751389523","UMLS:C5438815"],"termid":"MONDO:0017224","xrefs":{"Monarch":{"xref_id":"0017224"}}}


id: MONDO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomus tumor (obsolete MONDO:0002296)","termid":"MONDO:0002296","xrefs":{"Monarch":{"xref_id":"0002296"}}}


id: GO:0045747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Notch signaling pathway","synonyms":[{"name":"activation of Notch signaling pathway","type":"narrow"},{"name":"positive regulation of N signaling pathway","type":"exact"},{"name":"positive regulation of N signalling pathway","type":"exact"},{"name":"positive regulation of Notch signalling pathway","type":"exact"},{"name":"stimulation of Notch signaling pathway","type":"narrow"},{"name":"up regulation of Notch signaling pathway","type":"exact"},{"name":"up-regulation of Notch signaling pathway","type":"exact"},{"name":"upregulation of Notch signaling pathway","type":"exact"}],"termid":"GO:0045747"}


id: PBO:0059059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A pseudogene 2","termid":"PBO:0059059"}


id: PBO:0005290
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally induced by Cuf1","termid":"PBO:0005290"}


id: PBO:0004126
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.19","termid":"PBO:0004126"}


id: MONDO:0023157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibular hypoplasia scapulo pelvic dysplasia absent","termid":"MONDO:0023157","xrefs":{"Monarch":{"xref_id":"0023157"}}}


id: GO:0009746
data:
  {"annotated_genes":["SJAG_00574","SJAG_00472","SJAG_04026","SJAG_03081","SJAG_04312","SJAG_02444","SJAG_01754","SJAG_01699","SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107710,108657,110832,111343,96000,108307,103643,117374,118406],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hexose","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to hexose stimulus","type":"exact"}],"termid":"GO:0009746","terms_by_termid":{"GO:0010619":null}}


id: GO:0038169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by somatostatin binding to the somatostatin receptor (SSTR) on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:jc","PMID:8769369","PMID:18006219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"somatostatin receptor signaling pathway","synonyms":[{"name":"SST receptor signaling pathway","type":"exact"},{"name":"SSTR signaling pathway","type":"related"}],"termid":"GO:0038169"}


id: MONDO:0015085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bathing suit ichthyosis (BSI) is a rare variant of autosomal recessive congenital ichthyosis (ARCI) characterized by the presence of large dark scales in specific areas of the body.","definition_xrefs":["Orphanet:100976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bathing suit ichthyosis","secondary_identifiers":["MEDGEN:1386460","SCTID:725588002","GARD:16938","UMLS:C4511230","icd11.foundation:174005370"],"synonyms":[{"name":"BSI","type":"exact"}],"termid":"MONDO:0015085","xrefs":{"Monarch":{"xref_id":"0015085"}}}


id: PBO:0070811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 41","termid":"PBO:0070811"}


id: GO:0032597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor into a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor transport within lipid bilayer","termid":"GO:0032595"},{"relation_name":"is_a","term_name":"protein transport into membrane raft","termid":"GO:0032596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"B cell receptor transport into membrane raft","synonyms":[{"name":"B cell receptor translocation into membrane raft","type":"exact"},{"name":"B cell receptor transport into lipid raft","type":"exact"},{"name":"BCR translocation into membrane raft","type":"exact"},{"name":"BCR transport into membrane raft","type":"exact"}],"termid":"GO:0032597"}


id: PBO:0078755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRMT61A divergent transcript","termid":"PBO:0078755"}


id: MONDO:0015648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Startle epilepsy is a rare neurologic disease characterized by frequent and spontaneous epileptic seizures (frequently with symmetrical or asymmetrical tonic features) triggered by a normal startle in response to a sudden and unexpected somatosensory (most frequently auditory) stimulus. Falls are common and can be traumatic. In most cases, the disease is associated with spastic hemi-, di-, or tetraplegia and intellectual disability.","definition_xrefs":["Orphanet:166427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"startle epilepsy","secondary_identifiers":["MEDGEN:1633187","UMLS:C4706527","GARD:20081","SCTID:763632004","icd11.foundation:1012101161"],"termid":"MONDO:0015648","xrefs":{"Monarch":{"xref_id":"0015648"}}}


id: FYPO:0002176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has normal volume and dimensions and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable vegetative cell with normal cell size","synonyms":[{"name":"viable cell with normal cell size during vegetative growth","type":"exact"},{"name":"viable vegetative cell with normal cell length","type":"narrow"},{"name":"viable vegetative cell with normal cell size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002176"}


id: PBO:0087030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L14B; homologous to mammalian ribosomal protein L14, no bacterial homolog; RPL14B has a paralog, RPL14A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087030"}


id: SO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000660 DNA_invertase_target_sequence (obsolete SO:0000660)","termid":"SO:0000660"}


id: MONDO:0859142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hiatt-Neu-Cooper neurodevelopmental syndrome","secondary_identifiers":["OMIM:619311","UMLS:C5543338","MEDGEN:1785187"],"termid":"MONDO:0859142","xrefs":{"Monarch":{"xref_id":"0859142"}}}


id: GO:0016878
data:
  {"annotated_genes":["SJAG_03909","SJAG_01524","SJAG_03813","SJAG_02741","SJAG_00947","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003987"},{"annotations":[78581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[115262,107401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[107402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[117608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050203"},{"annotations":[107403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"},{"annotations":[77016,73439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of an acid and a thiol via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.2.1.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_01524":null,"SJAG_02741":null,"SJAG_03471":null,"SJAG_03813":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acid-thiol ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016878","terms_by_termid":{"GO:0003987":null,"GO:0004775":null,"GO:0031956":null,"GO:0050203":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: GO:1905088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptonemal complex assembly.","definition_xrefs":["PMID:24797370","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of synaptonemal complex assembly","termid":"GO:0090173"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"synaptonemal complex assembly","termid":"GO:0007130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptonemal complex assembly","synonyms":[{"name":"activation of synaptonemal complex assembly","type":"narrow"},{"name":"activation of synaptonemal complex formation","type":"narrow"},{"name":"positive regulation of synaptonemal complex formation","type":"exact"},{"name":"up regulation of synaptonemal complex assembly","type":"exact"},{"name":"up regulation of synaptonemal complex formation","type":"exact"},{"name":"up-regulation of synaptonemal complex assembly","type":"exact"},{"name":"up-regulation of synaptonemal complex formation","type":"exact"},{"name":"upregulation of synaptonemal complex assembly","type":"exact"},{"name":"upregulation of synaptonemal complex formation","type":"exact"}],"termid":"GO:1905088"}


id: PBO:0038728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 23","termid":"PBO:0038728"}


id: GO:0048038
data:
  {"annotated_genes":["SJAG_02398","SJAG_03198","SJAG_04223"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72483],"is_not":false,"summary":null,"term":"GO:0048038"},{"annotations":[117057,78500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048039"}]},"cv_name":"molecular_function","definition":"Binding to a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_03198":null,"SJAG_04223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"quinone binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048038","terms_by_termid":{"GO:0048038":null,"GO:0048039":null}}


id: MONDO:0014669
data:
  {"annotated_genes":["SJAG_04225"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86821],"is_not":false,"summary":null,"term":"MONDO:0014669"}]},"cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the DRAM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4049066","DOID:0081447","GARD:16125","MEDGEN:891534","OMIM:616502"],"synonyms":[{"name":"CORD21","type":"related"},{"name":"DRAM2 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 21","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in DRAM2","type":"exact"},{"name":"cone-rod dystrophy type 21","type":"exact"},{"name":"retinal dystrophy with early macular involvement","type":"related"}],"termid":"MONDO:0014669","terms_by_termid":{"MONDO:0014669":null},"xrefs":{"Monarch":{"xref_id":"0014669"}}}


id: GO:0009812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavonoids, a group of water-soluble phenolic derivatives containing a flavan skeleton including flavones, flavonols and flavanoids, and anthocyanins.","definition_xrefs":["GOC:tair_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid metabolic process","synonyms":[{"name":"flavonoid metabolism","type":"exact"}],"termid":"GO:0009812"}


id: PR:Q92375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.03","secondary_identifiers":["UniProtKB:Q92375"],"synonyms":[{"name":"Spom972h-trxB","type":"exact"},{"name":"caffeine resistance protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92375"}


id: FYPO:0002030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cable. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah","GO:0070648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cable organization","synonyms":[{"name":"abnormal actin cable organisation during vegetative growth","type":"exact"},{"name":"abnormal actin cable organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable organization during vegetative growth","type":"exact"},{"name":"abnormal formin-nucleated actin cable organization during vegetative growth","type":"exact"}],"termid":"FYPO:0002030"}


id: FYPO:0009105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are mislocalized during telophase of the mitotic cell cycle.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"mislocalized nucleus during mitotic telophase","synonyms":[{"name":"abnormal nuclei location during mitotic telophase","type":"exact"},{"name":"abnormal nucleus location during mitotic telophase","type":"exact"},{"name":"abnormal nucleus position during mitotic telophase","type":"exact"},{"name":"abnormal nucleus positioning during mitotic telophase","type":"exact"},{"name":"mislocalised nuclei during mitotic telophase","type":"exact"},{"name":"mislocalised nucleus during mitotic telophase","type":"exact"}],"termid":"FYPO:0009105"}


id: PBO:0028201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028201"}


id: PBO:0066147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 3","termid":"PBO:0066147"}


id: PBO:0114493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitofusin, involved in mitochondrial outer membrane fusion; mediates contacts between mitochondria and peroxisomes that regulate mitochondrial fusion; GTPase domain is required for auto-oligomerization and for efficient tethering, homotypic fusion and degradation of Fzo1p; role in mitochondrial genome maintenance; targeted for destruction by SCF-Mdm30p and the cytosolic ubiquitin-proteasome system; activity regulated by ubiquitination at conserved lysines and by deubiquitinases Ubp2p and Ubp12p","termid":"PBO:0114493"}


id: PBO:0073375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine rich and transmembrane domain containing 1","termid":"PBO:0073375"}


id: GO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic phospholipase A2 activity (obsolete GO:0004626)","synonyms":[{"name":"cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004626"}


id: GO:0002676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response","termid":"GO:0002676"}


id: PBO:0055110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2529","termid":"PBO:0055110"}


id: GO:1905382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["GOC:TermGenie","GOC:bhm","GO_REF:0000058","PMID:10022900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of snRNA transcription by RNA polymerase II","termid":"GO:1905380"},{"relation_name":"positively_regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0016073","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"activation of snRNA transcription from Pol II promoter","type":"narrow"},{"name":"activation of snRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905382"}


id: PBO:0044390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily B member 7, pseudogene","termid":"PBO:0044390"}


id: PBO:0079333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 19","termid":"PBO:0079333"}


id: PBO:0072495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 24","termid":"PBO:0072495"}


id: GO:1902091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23488861","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of fumagillin biosynthetic process","termid":"GO:1902090"},{"relation_name":"negatively_regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of fumagillin biosynthetic process","synonyms":[{"name":"down regulation of fumagillin anabolism","type":"exact"},{"name":"down regulation of fumagillin biosynthesis","type":"exact"},{"name":"down regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down regulation of fumagillin formation","type":"exact"},{"name":"down regulation of fumagillin synthesis","type":"exact"},{"name":"down-regulation of fumagillin anabolism","type":"exact"},{"name":"down-regulation of fumagillin biosynthesis","type":"exact"},{"name":"down-regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down-regulation of fumagillin formation","type":"exact"},{"name":"down-regulation of fumagillin synthesis","type":"exact"},{"name":"downregulation of fumagillin anabolism","type":"exact"},{"name":"downregulation of fumagillin biosynthesis","type":"exact"},{"name":"downregulation of fumagillin biosynthetic process","type":"exact"},{"name":"downregulation of fumagillin formation","type":"exact"},{"name":"downregulation of fumagillin synthesis","type":"exact"},{"name":"inhibition of fumagillin anabolism","type":"exact"},{"name":"inhibition of fumagillin biosynthesis","type":"exact"},{"name":"inhibition of fumagillin biosynthetic process","type":"narrow"},{"name":"inhibition of fumagillin formation","type":"exact"},{"name":"inhibition of fumagillin synthesis","type":"exact"},{"name":"negative regulation of fumagillin anabolism","type":"exact"},{"name":"negative regulation of fumagillin biosynthesis","type":"exact"},{"name":"negative regulation of fumagillin formation","type":"exact"},{"name":"negative regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902091"}


id: PBO:0081886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 836","termid":"PBO:0081886"}


id: MONDO:0013015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the SCN1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 5","secondary_identifiers":["UMLS:C2748541","GARD:15584","MEDGEN:411607","DOID:0110222","OMIM:612838"],"synonyms":[{"name":"BRGDA5","type":"exact"},{"name":"Brugada syndrome 5","type":"exact"},{"name":"Brugada syndrome caused by mutation in SCN1B","type":"exact"},{"name":"Brugada syndrome type 5","type":"exact"},{"name":"Cardiac conduction defect, nonspecific","type":"related"},{"name":"SCN1B Brugada syndrome","type":"exact"}],"termid":"MONDO:0013015","xrefs":{"Monarch":{"xref_id":"0013015"}}}


id: MONDO:0009803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital osteogenesis imperfecta-microcephaly-cataracts syndrome is characterized by multiple fractures in the prenatal period, microcephaly and bilateral cataracts. It has been described in three infants all of whom died in utero or a few hours after birth. The mode of inheritance appears to be autosomal recessive.","definition_xrefs":["Orphanet:2772"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital osteogenesis imperfecta-microcephaly-cataracts syndrome","secondary_identifiers":["ICD10CM:Q78.0","MESH:C537558","OMIM:259410","MEDGEN:337988","UMLS:C1850184","GARD:4139"],"synonyms":[{"name":"osteogenesis imperfecta congenita, microcephaly, and cataracts","type":"related"}],"termid":"MONDO:0009803","xrefs":{"Monarch":{"xref_id":"0009803"}}}


id: MONDO:0012036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 4","secondary_identifiers":["UMLS:C1842057","MEDGEN:374849","OMIM:608437"],"synonyms":[{"name":"SLEB4","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012036","xrefs":{"Monarch":{"xref_id":"0012036"}}}


id: PBO:0038389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_protein","termid":"PBO:0038389"}


id: GO:0004903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a growth hormone and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:ai","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"growth hormone receptor activity","termid":"GO:0004903"}


id: PBO:0051285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-32 (pseudogene)","termid":"PBO:0051285"}


id: MONDO:0009545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroepiphyseal dysplasia with osteoporosis, wrinkled skin, and aged appearance","secondary_identifiers":["MEDGEN:419847","MESH:C537721","UMLS:C2931597","OMIM:248010"],"synonyms":[{"name":"Macroepiphyseal dysplasia, McAlister coe type","type":"related"},{"name":"McAlister coe Whyte syndrome","type":"related"},{"name":"macroepiphyseal dysplasia with osteoporosis, wrinkled skin, and aged appearance","type":"exact"}],"termid":"MONDO:0009545","xrefs":{"Monarch":{"xref_id":"0009545"}}}


id: MONDO:0024520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal agenesis","termid":"MONDO:0018470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal hypodysplasia/aplasia 3","secondary_identifiers":["UMLS:C4540497","OMIM:617805","MEDGEN:1626497"],"synonyms":[{"name":"RHDA3","type":"exact"},{"name":"renal hypodysplasia/aplasia 3","type":"exact"}],"termid":"MONDO:0024520","xrefs":{"Monarch":{"xref_id":"0024520"}}}


id: GO:0031279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclase activity (obsolete GO:0031279)","termid":"GO:0031279"}


id: GO:0045514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-16 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-16 receptor binding","synonyms":[{"name":"IL-16","type":"narrow"},{"name":"interleukin-16 receptor ligand","type":"narrow"}],"termid":"GO:0045514"}


id: GO:0040005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attaching of a chitin-containing cuticle to the epithelium underlying it. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle attachment to epithelium","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"}],"termid":"GO:0040005"}


id: GO:0071111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclic di-3',5'-guanylate + H2O = 5'-phosphoguanylyl(3'->5')guanosine + H+.","definition_xrefs":["RHEA:24902","EC:3.1.4.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"cyclic-guanylate-specific phosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R08991","MetaCyc:RXN0-4181"],"synonyms":[{"name":"PDEA1","type":"related"},{"name":"VieA","type":"related"},{"name":"c-di-GMP phosphodiesterase activity","type":"related"},{"name":"c-di-GMP-specific phosphodiesterase activity","type":"related"},{"name":"cyclic bis(3->5')diguanylate phosphodiesterase activity","type":"related"},{"name":"phosphodiesterase A1 activity","type":"related"}],"termid":"GO:0071111"}


id: PBO:0064366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PML nuclear body scaffold","termid":"PBO:0064366"}


id: PBO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 29","termid":"PBO:0070530"}


id: GO:0004760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + pyruvate = 3-hydroxypyruvate + L-alanine.","definition_xrefs":["EC:2.6.1.51","RHEA:22852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-serine-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R00585","GO:0004761","GO:0004763","GO:0004762","MetaCyc:SERINE--PYRUVATE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-serine:pyruvate aminotransferase activity","type":"related"},{"name":"SPT","type":"related"},{"name":"hydroxypyruvate:L-alanine transaminase activity","type":"related"},{"name":"serine--pyruvate aminotransferase activity","type":"related"},{"name":"serine-pyruvate aminotransferase activity","type":"exact"},{"name":"serine-pyruvate aminotransferase, type 1","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2A","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2B","type":"narrow"}],"termid":"GO:0004760"}


id: MOD:01608
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-(L-isoglutamyl)-L-lysine. This is not an isopeptide cross-link.","definition_xrefs":["RESID:AA0505","PubMed:19620981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-(L-isoglutamyl)-L-lysine","synonyms":[{"name":"(2S)-6-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"5-glutamyl N2-lysine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-lysine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-lysine","type":"exact"},{"name":"N2-(gamma-glutamyl)lysine","type":"exact"},{"name":"alpha-(gamma-glutamyl)lysine","type":"exact"},{"name":"gamma-glutamyl N2-lysine","type":"exact"}],"termid":"MOD:01608"}


id: MONDO:0018790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete COL4A1 or COL4A2-related cerebral small vessel disease with hemorrhagic tendency (obsolete MONDO:0018790)","secondary_identifiers":["Orphanet:477765"],"synonyms":[{"name":"COL4A1 or COL4A2-related cerebral angiopathy with hemorrhagic tendency","type":"exact"}],"termid":"MONDO:0018790","xrefs":{"Monarch":{"xref_id":"0018790"}}}


id: PBO:0056761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15","termid":"PBO:0056761"}


id: MONDO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that affects the cerebellopontine angle. Representative examples include vestibular schwannoma and meningioma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brainstem cancer","termid":"MONDO:0002912"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellopontine angle tumor","secondary_identifiers":["DOID:3200","NCIT:C5414","SCTID:126947009","UMLS:C0474740","MEDGEN:99181"],"synonyms":[{"name":"C-P angle neoplasm","type":"exact"},{"name":"C-P angle tumor","type":"exact"},{"name":"C-P angle tumour","type":"exact"},{"name":"cerebellar Pontine angle neoplasm","type":"exact"},{"name":"cerebellar Pontine angle tumor","type":"exact"},{"name":"cerebellar Pontine angle tumour","type":"exact"},{"name":"cerebellopontine angle neoplasm","type":"exact"},{"name":"cerebellopontine angle neoplasm (disease)","type":"exact"},{"name":"cerebellopontine angle tumor","type":"exact"},{"name":"neoplasm of C-P angle","type":"exact"},{"name":"neoplasm of cerebellar Pontine angle","type":"exact"},{"name":"neoplasm of cerebellopontine angle","type":"exact"},{"name":"neoplasm of the C-P angle","type":"exact"},{"name":"neoplasm of the cerebellar Pontine angle","type":"exact"},{"name":"neoplasm of the cerebellopontine angle","type":"exact"},{"name":"tumor of C-P angle","type":"exact"},{"name":"tumor of cerebellar Pontine angle","type":"exact"},{"name":"tumor of cerebellopontine angle","type":"exact"},{"name":"tumor of the C-P angle","type":"exact"},{"name":"tumor of the cerebellar Pontine angle","type":"exact"},{"name":"tumor of the cerebellopontine angle","type":"exact"},{"name":"tumour of C-P angle","type":"exact"},{"name":"tumour of cerebellar Pontine angle","type":"exact"},{"name":"tumour of cerebellopontine angle","type":"exact"},{"name":"tumour of the C-P angle","type":"exact"},{"name":"tumour of the cerebellar Pontine angle","type":"exact"},{"name":"tumour of the cerebellopontine angle","type":"exact"}],"termid":"MONDO:0002553","xrefs":{"Monarch":{"xref_id":"0002553"}}}


id: MONDO:0043257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus foliaceus","termid":"MONDO:0019324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pemphigus and fogo selvagem","secondary_identifiers":["GARD:7353","SCTID:46459009","HGNC:3048","MESH:C535551","MEDGEN:120470","Orphanet:636955","UMLS:C0263314"],"synonyms":[{"name":"Brazilian pemphigus","type":"related"},{"name":"Brazilian pemphigus foliaceus","type":"exact"},{"name":"FS","type":"related"},{"name":"South American pemphigus","type":"related"},{"name":"amendola's syndrome","type":"related"},{"name":"endemic pemphigus foliaceus","type":"related"},{"name":"fogo selvagem","type":"related"},{"name":"wild fire","type":"related"},{"name":"wildfire pemphigus","type":"related"}],"termid":"MONDO:0043257","xrefs":{"Monarch":{"xref_id":"0043257"}}}


id: GO:0072242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric distal convoluted tubule cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell fate commitment","termid":"GO:0072146"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell fate commitment","synonyms":[{"name":"metanephric distal convoluted tubule cell fate commitment","type":"exact"}],"termid":"GO:0072242"}


id: PBO:0082441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; also involved in response to DNA damage; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome; CLB2 has a paralog, CLB1, that arose from the whole genome duplication","termid":"PBO:0082441"}


id: MONDO:1012115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, pig","secondary_identifiers":["OMIA:000527-9823"],"termid":"MONDO:1012115","xrefs":{"Monarch":{"xref_id":"1012115"}}}


id: PBO:0074808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 3","termid":"PBO:0074808"}


id: PBO:0034407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcriptionally_regulates_(obsolete_transcriptionally_regulates)","termid":"PBO:0034407"}


id: PR:Q9P3B2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rcf2 gene.","definition_xrefs":["UniProtKB:Q9P3B2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory supercomplex factor 2 homolog C1565.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.01","synonyms":[{"name":"Spom972h-rcf2","type":"exact"}],"termid":"PR:Q9P3B2"}


id: MONDO:0011886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"DYT13 type primary dystonia is characterized by focal or segmental dystonia with cranial, cervical, or upper limb involvement.","definition_xrefs":["Orphanet:98807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"torsion dystonia 13","secondary_identifiers":["NANDO:1200527","SCTID:719278006","GARD:10537","DOID:0090037","UMLS:C1843264","MEDGEN:335918","MESH:C564354","OMIM:607671"],"synonyms":[{"name":"DYT13","type":"exact"},{"name":"dystonia 13, torsion, autosomal dominant","type":"related"},{"name":"primary dystonia with mixed phenotype","type":"exact"},{"name":"primary dystonia, DYT13 type","type":"related"},{"name":"primary torsion dystonia with predominant craniocervical or upper limb onset","type":"exact"},{"name":"torsion dystonia type 13","type":"exact"}],"termid":"MONDO:0011886","xrefs":{"Monarch":{"xref_id":"0011886"}}}


id: GO:0090605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"submerged biofilm formation","synonyms":[{"name":"solid substrate biofilm formation","type":"related"}],"termid":"GO:0090605"}


id: GO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plastoglobule. Plastoglobule is a lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids.","definition_xrefs":["PMID:20813909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plastoglobule organization","synonyms":[{"name":"plastoglobule organisation","type":"exact"}],"termid":"GO:0080177"}


id: MOD:00213
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-serine residue to the polymer chondroitin sulfate by a D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl tetrasaccharide.","definition_xrefs":["PubMed:3472204","PubMed:1794445","PubMed:1898736","RESID:AA0208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"chondroitin sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"chondroitin 4-sulfate (chondroitin sulfate A)","type":"exact"},{"name":"chondroitin 6-sulfate (chondroitin sulfate C)","type":"exact"},{"name":"chondroitin sulfate D-glucuronosyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"},{"name":"poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate-D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine; poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-6-sulfate D-galactosyl)]-beta-1,4-D-glucopyranuronosyl-beta-1,3-D-galactosyl-beta-1,3-D-galactosyl-beta-1,4-D-xylosyl-beta-1,3-L-serine","type":"exact"}],"termid":"MOD:00213"}


id: PBO:0065789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase accessory subunit 2","termid":"PBO:0065789"}


id: FYECO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethylenediaminetetraacetic acid (EDTA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ EDTA","synonyms":[{"name":"EDTA added","type":"exact"},{"name":"ethylenediaminetetraacetic acid added","type":"exact"}],"termid":"FYECO:0000176"}


id: GO:0110155
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74757],"is_not":false,"summary":null,"term":"GO:0110155"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-NAD-cap of an RNA. The NAD-cap is present at the 5'-end of some RNAs in both bacetria and eukaryotes. While it promotes RNA stability in bacteria, it promotes RNA decay in eukaryotes.","definition_xrefs":["PMID:31101919","GOC:sp","PMID:25533955","PMID:28283058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA decapping","termid":"GO:0110154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NAD-cap decapping","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0110155","terms_by_termid":{"GO:0110155":null}}


id: PBO:0079151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPAN11 antisense RNA 1","termid":"PBO:0079151"}


id: PBO:0082781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex","termid":"PBO:0082781"}


id: PBO:0073927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 14 pseudogene 1","termid":"PBO:0073927"}


id: GO:1900350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"activation of methane biosynthetic process from methylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from methylamine","type":"exact"}],"termid":"GO:1900350"}


id: PBO:0054933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2347","termid":"PBO:0054933"}


id: GO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderochrome enterochelin, a cyclic trimer of 2, 3 dihydroxybenzoylserine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"enterobactin transmembrane transporter activity","synonyms":[{"name":"enterobactin transporter activity","type":"related"},{"name":"enterochelin transporter activity","type":"exact"}],"termid":"GO:0042931"}


id: FYPO:0002004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable microtubules of one or more types.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"microtubules absent from cell","synonyms":[{"name":"absent microtubules","type":"exact"},{"name":"microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002004"}


id: PR:P0CT80
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2802 gene.","definition_xrefs":["UniProtKB:P0CT80","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.15c","synonyms":[{"name":"S33 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2802","type":"exact"}],"termid":"PR:P0CT80"}


id: PBO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose metabolism cluster","termid":"PBO:0036495"}


id: GO:1903335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vacuolar transport.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of vacuolar transport","termid":"GO:1903335"}


id: GO:0140886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of interferon-mediated signaling in the host organism.","definition_xrefs":["PMID:31266861","PMID:33097660","PMID:34305858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","synonyms":[{"name":"inhibition of host interferon signaling pathway by symbiont","type":"related"},{"name":"negative regulation by virus of host interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by symbiont of host IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by symbiont of host interferon-mediated signalling pathway","type":"exact"},{"name":"suppression by virus of host interferon-mediated signaling pathway","type":"narrow"}],"termid":"GO:0140886"}


id: MONDO:0958325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 12 with or without myopathy","secondary_identifiers":["UMLS:C5935593","MEDGEN:1861803","OMIM:620757"],"termid":"MONDO:0958325","xrefs":{"Monarch":{"xref_id":"0958325"}}}


id: PBO:0091959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase","termid":"PBO:0091959"}


id: PR:Q10442
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C12B10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.09","synonyms":[{"name":"Spom972h-pet801","type":"exact"}],"termid":"PR:Q10442"}


id: GO:0034157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 7 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 7 signaling pathway","termid":"GO:0034155"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 7 signaling pathway","termid":"GO:0034154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 7 signaling pathway","synonyms":[{"name":"positive regulation of TLR7 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034157"}


id: FYPO:0006544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during mitosis. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during mitosis","synonyms":[{"name":"decreased transcription during cellular response to calcium ion during mitotic M phase","type":"related"},{"name":"decreased transcription during mitosis during vegetative growth","type":"exact"},{"name":"decreased transcription during mitotic nuclear division","type":"exact"},{"name":"reduced transcription during mitosis","type":"exact"}],"termid":"FYPO:0006544"}


id: PBO:0038705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin epsilon 1, pseudogene","termid":"PBO:0038705"}


id: FYPO:0005404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes remain linear, but lose telomeric repeats. Subtelomeric DNA may also be lost.","definition_xrefs":["PomBase:mah","PMID:12930956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0005447","FYPO:0000654","FYPO:0000641"],"is_obsolete":false,"name":"telomeric regions absent from linear chromosomes","synonyms":[{"name":"telomeric regions absent from linear chromosomes during mitotic cell cycle","type":"related"},{"name":"telomeric regions absent from linear chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0005404"}


id: MONDO:0003537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of lymphoblasts committed to the T-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called T acute lymphoblastic leukemia. When it involves nodal or extranodal sites it is called T lymphoblastic lymphoma. (WHO, 2001)","definition_xrefs":["NCIT:C8694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"T-cell and NK-cell neoplasm","termid":"MONDO:0024615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-lymphoblastic lymphoma/leukemia","secondary_identifiers":["DOID:5599","ICDO:9837/3","MEDGEN:224897","UMLS:C1301359"],"synonyms":[{"name":"T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T lymphoblastic lymphoma/leukemia","type":"exact"},{"name":"precursor T-lymphoblastic lymphoma/leukemia","type":"exact"}],"termid":"MONDO:0003537","xrefs":{"Monarch":{"xref_id":"0003537"}}}


id: GO:0034564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,4'-dihydroxy-alpha-methylstilbene + O2 = 4-hydroxybenzaldehyde + 4-hydroxyacetophenone + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,4'-dihydroxy-alpha-methylstilbene dioxygenase activity (obsolete GO:0034564)","termid":"GO:0034564"}


id: GO:0050622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + 2 A = HCN + CO2 + 2 AH2.","definition_xrefs":["RHEA:15821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycine dehydrogenase (cyanide-forming) activity","secondary_identifiers":["EC:1.4.99.5","MetaCyc:1.4.99.5-RXN"],"synonyms":[{"name":"HCN synthase activity","type":"related"},{"name":"glycine:acceptor oxidoreductase (hydrogen-cyanide-forming)","type":"related"},{"name":"hydrogen cyanide synthase activity","type":"related"}],"termid":"GO:0050622"}


id: PBO:0064488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A","termid":"PBO:0064488"}


id: GO:0007256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress.","definition_xrefs":["PMID:11790549","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JNKK activity (obsolete GO:0007256)","synonyms":[{"name":"activation of JUN kinase kinase activity","type":"exact"},{"name":"positive regulation of JUNKK activity","type":"broad"}],"termid":"GO:0007256"}


id: FYPO:0004080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"increased histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"increased histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3S10 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004080"}


id: MONDO:0020469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"48,XYYY syndrome is a rare Y chromosome number anomaly that affects only males and is characterized by mild-moderate developmental delay (especially speech), normal to mild intellectual disability, large, irregular teeth with poor enamel, tall stature and acne. Radioulnar stenosis and clinodactyly have also been associated. Boys generally present normal genitalia, while hypogonadism and infertility is frequently reported in adult males.","definition_xrefs":["Orphanet:99329"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"tetrasomy","termid":"MONDO:0030502"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"48,XYYY syndrome","secondary_identifiers":["MEDGEN:1371767","SCTID:733625003","UMLS:C4518082","GARD:11985"],"synonyms":[{"name":"48,XYYY","type":"related"}],"termid":"MONDO:0020469","xrefs":{"Monarch":{"xref_id":"0020469"}}}


id: GO:2000085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"negative regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000085"}


id: PBO:0071720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 18","termid":"PBO:0071720"}


id: PBO:0067627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 799, pseudogene","termid":"PBO:0067627"}


id: MONDO:0011191
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Capillary hemangiomas are benign, highly proliferative lesions involving aberrant localized growth of capillary endothelium. They are the most common tumor of infancy, occurring in up to 10% of all births. Hemangiomas tend to appear shortly after birth and show rapid neonatal growth for up to 12 months characterized by endothelial hypercellularity and increased numbers of mast cells. This phase is followed by slow involution at a rate of about 10% per year and replacement by fibrofatty stroma. Hemangiomas are classified as distinct from vascular malformations, in that the latter are present from birth, tend to grow with the individual, do not regress, and show normal rates of endothelial cell turnover.","definition_xrefs":["OMIM:602089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary hemangioma","termid":"MONDO:0002407"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary infantile hemangioma","secondary_identifiers":["NCIT:C6645","UMLS:C1865871","MESH:C535860","MEDGEN:355573","Orphanet:464293","Orphanet:91415"],"synonyms":[{"name":"HCI","type":"exact"},{"name":"hemangioma, capillary infantile","type":"exact"},{"name":"hemangioma, capillary infantile, somatic","type":"exact"},{"name":"hemangioma, hereditary capillary","type":"exact"},{"name":"hereditary capillary infantile hemangioma","type":"exact"}],"termid":"MONDO:0011191","xrefs":{"Monarch":{"xref_id":"0011191"}}}


id: MONDO:0022560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder that affects women with a history of uterine leiomyoma, which is found to metastasise within extrauterine sites.The disease develops as a proliferation of multiple nodules composed of smooth muscle cells.The most frequent site of metastasis is the lungs, although other areas may also be affected as well, including some atypical locations, e.g. the heart or spinal cord.","definition_xrefs":["PMID:28426767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign metastasizing leiomyoma","secondary_identifiers":["UMLS:C1511090","MEDGEN:307261"],"termid":"MONDO:0022560","xrefs":{"Monarch":{"xref_id":"0022560"}}}


id: PR:O74928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional purine biosynthesis protein PURH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11692:SF0","OMA:SCHPO04519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthesis protein ade10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.03c","secondary_identifiers":["UniProtKB:O74928"],"synonyms":[{"name":"Spom972h-ATIC","type":"exact"}],"termid":"PR:O74928"}


id: MONDO:0009127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, low-birth-weight type, with unresponsiveness to growth hormone","secondary_identifiers":["MEDGEN:387764","UMLS:C1857197","OMIM:223500","MESH:C565615"],"synonyms":[{"name":"dwarfism, low-birth-weight type with unresponsiveness to growth hormone","type":"related"},{"name":"dwarfism, low-birth-weight type, with unresponsiveness to growth hormone","type":"exact"}],"termid":"MONDO:0009127","xrefs":{"Monarch":{"xref_id":"0009127"}}}


id: PBO:0119739
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mamRNA is produced from a longer precursor transcript encompassing the downstream snoU14 gene and contains a previously unannotated intron, which itself encodes a C/D box snoRNA (snR107)","termid":"PBO:0119739"}


id: GO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:rph","PMID:20951801","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"positively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"}


id: PBO:0030685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_morphology","termid":"PBO:0030685"}


id: PBO:0031799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_G2/M_phase_transition","termid":"PBO:0031799"}


id: GO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.","definition_xrefs":["PMID:1270266","GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina layer formation","synonyms":[{"name":"retinal lamination","type":"exact"},{"name":"retinal layer formation","type":"exact"}],"termid":"GO:0010842"}


id: MONDO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lagophthalmos","termid":"MONDO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"mechanical lagophthalmos","secondary_identifiers":["icd11.foundation:466575235","MEDGEN:509845","SCTID:21783006","ICD10CM:H02.22","UMLS:C0155198","ICD9:374.22","DOID:13037"],"termid":"MONDO:0001622","xrefs":{"Monarch":{"xref_id":"0001622"}}}


id: GO:0009245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of four to six fatty acyl chains linked to two glucosamine residues. Further modifications of the backbone are common.","definition_xrefs":["PMID:22216004","ISBN:0198506732","PMID:20974832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"lipid A metabolic process","termid":"GO:0046493"},{"relation_name":"is_a","term_name":"lipooligosaccharide biosynthetic process","termid":"GO:1901271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid A biosynthetic process","secondary_identifiers":["MetaCyc:NAGLIPASYN-PWY"],"synonyms":[{"name":"lipid A anabolism","type":"exact"},{"name":"lipid A biosynthesis","type":"exact"},{"name":"lipid A formation","type":"exact"},{"name":"lipid A synthesis","type":"exact"}],"termid":"GO:0009245"}


id: PBO:0084221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 chaperone with a role in SUMO-mediated protein degradation; works in concert with Hsp70 and Hsp110 (Sse1p) to promote disaggregation of intranuclear protein inclusions; competes with Hsp104 in disaggregation, supporting turnover instead of refolding; member of DnaJ-like family, conserved across eukaryotes; overexpression interferes with propagation of the [Psi+] prion; forms nuclear foci upon DNA replication stress","termid":"PBO:0084221"}


id: PBO:0091731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric small non-coding RNA","termid":"PBO:0091731"}


id: GO:0016007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The major and minor mitochondrial derivatives are the mitochondria of the sperm tail and derive by the unfolding of the Nebenkern during flagellum elongation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mitochondrial derivative","termid":"GO:0016007"}


id: MONDO:0030992
data:
  {"annotated_genes":["SJAG_04161"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87303],"is_not":false,"summary":null,"term":"MONDO:0030992"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04161":null},"genotype_count":0,"is_obsolete":false,"name":"short stature, oligodontia, dysmorphic facies, and motor delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1787876","OMIM:619234","UMLS:C5543206"],"synonyms":[{"name":"SOFM","type":"exact"}],"termid":"MONDO:0030992","terms_by_termid":{"MONDO:0030992":null},"xrefs":{"Monarch":{"xref_id":"0030992"}}}


id: GO:1900540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fumonisin catabolic process","synonyms":[{"name":"fumonisin breakdown","type":"exact"},{"name":"fumonisin catabolism","type":"exact"},{"name":"fumonisin degradation","type":"related"}],"termid":"GO:1900540"}


id: PBO:0003572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U14","termid":"PBO:0003572"}


id: GO:0016447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"somatic recombination of immunoglobulin gene segments","synonyms":[{"name":"somatic recombination of antibody gene segments","type":"exact"}],"termid":"GO:0016447"}


id: PBO:0056978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29b-2","termid":"PBO:0056978"}


id: MONDO:0014329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any atrial standstill in which the cause of the disease is a mutation in the NPPA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial standstill","termid":"MONDO:0015281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial standstill 2","secondary_identifiers":["DOID:0080663","OMIM:615745","UMLS:C3810401","MEDGEN:816731","GARD:18612"],"synonyms":[{"name":"ATRST2","type":"related"},{"name":"NPPA atrial standstill","type":"exact"},{"name":"atrial dilation and standstill","type":"related"},{"name":"atrial standstill 2","type":"exact"},{"name":"atrial standstill caused by mutation in NPPA","type":"exact"},{"name":"atrial standstill type 2","type":"exact"},{"name":"cardiomyopathy, atrial dilated, with atrial standstill","type":"related"}],"termid":"MONDO:0014329","xrefs":{"Monarch":{"xref_id":"0014329"}}}


id: PBO:0088113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aspartate and glutamate exporter; member of a family of seven genes (AVT1-7) related to vesicular GABA-glycine transporters; involved in compartmentalizing acidic amino acids in response to nitrogen starvation; AVT6 has a paralog, AVT5, that arose from the whole genome duplication","termid":"PBO:0088113"}


id: MONDO:0003000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A unique group of rare tumors of the central nervous system that affect mainly children and adolescents. Their morphologic and biologic profile corresponds to that of homologous germ cell tumors that arise in the gonads and in other extragonadal sites. Representative examples include: germinoma, embryonal carcinoma, yolk sac tumor, choriocarcinoma, and teratoma.","definition_xrefs":["NCIT:C5461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"},{"relation_name":"is_a","term_name":"extragonadal germ cell tumor","termid":"MONDO:0018201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system germ cell tumor","secondary_identifiers":["DOID:4439","MEDGEN:232040","UMLS:C1332880"],"synonyms":[{"name":"CNS germ cell neoplasm","type":"exact"},{"name":"CNS germ cell tumor","type":"exact"},{"name":"CNS germ cell tumour","type":"exact"},{"name":"central nervous system germ cell neoplasm","type":"exact"},{"name":"central nervous system germ cell tumor","type":"exact"},{"name":"central nervous system rare germ cell tumor","type":"exact"},{"name":"central nervous system rare germ cell tumour","type":"exact"},{"name":"germ cell neoplasm of CNS","type":"exact"},{"name":"germ cell neoplasm of central nervous system","type":"exact"},{"name":"germ cell neoplasm of the CNS","type":"exact"},{"name":"germ cell neoplasm of the central nervous system","type":"exact"},{"name":"germ cell tumor of CNS","type":"exact"},{"name":"germ cell tumor of central nervous system","type":"exact"},{"name":"germ cell tumor of the CNS","type":"exact"},{"name":"germ cell tumor of the central nervous system","type":"exact"},{"name":"germ cell tumour of CNS","type":"exact"},{"name":"germ cell tumour of central nervous system","type":"exact"},{"name":"germ cell tumour of the CNS","type":"exact"},{"name":"germ cell tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0003000","xrefs":{"Monarch":{"xref_id":"0003000"}}}


id: PATO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A virulence that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"virulence","termid":"PATO:0002146"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased virulence","termid":"PATO:0002148"}


id: PBO:0075498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 45","termid":"PBO:0075498"}


id: PBO:0074016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 10","termid":"PBO:0074016"}


id: PBO:0073330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 6","termid":"PBO:0073330"}


id: GO:0033818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonyl-[acyl-carrier protein] = acetoacyl-[acyl-carrier protein] + CoA + CO2.","definition_xrefs":["EC:2.3.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"beta-ketoacyl-acyl-carrier-protein synthase III activity","secondary_identifiers":["MetaCyc:2.3.1.180-RXN","RHEA:12080"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein synthase III activity","type":"related"},{"name":"3-oxoacyl:ACP synthase III activity","type":"related"},{"name":"FabH","type":"related"},{"name":"KAS III","type":"related"},{"name":"KASIII","type":"related"},{"name":"acetyl-CoA:malonyl-acyl-carrier-protein C-acyltransferase activity","type":"related"},{"name":"beta-ketoacyl (acyl carrier protein) synthase III activity","type":"related"},{"name":"beta-ketoacyl-ACP synthase III activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthase III activity","type":"related"}],"termid":"GO:0033818"}


id: SO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes in frame elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated_polypeptide_N_terminal","termid":"SO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_in_frame_polypeptide_N_terminal_elongation","synonyms":[{"name":"elongated in frame polypeptide N terminal","type":"exact"}],"termid":"SO:0001614"}


id: PBO:0043596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL25A1 divergent transcript","termid":"PBO:0043596"}


id: GO:1904085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of epiboly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of epiboly (obsolete GO:1904085)","synonyms":[{"name":"activation of epiboly","type":"narrow"},{"name":"positive regulation of epiboly","type":"exact"},{"name":"up regulation of epiboly","type":"exact"},{"name":"up-regulation of epiboly","type":"exact"},{"name":"upregulation of epiboly","type":"exact"}],"termid":"GO:1904085"}


id: PBO:0045861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 2","termid":"PBO:0045861"}


id: PATO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's having an onset and time course between acute and chronic.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute","termid":"PATO:0002091"}


id: GO:1903226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:23154389","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"positively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endodermal cell differentiation","synonyms":[{"name":"activation of endoderm cell differentiation","type":"narrow"},{"name":"activation of endodermal cell differentiation","type":"narrow"},{"name":"positive regulation of endoderm cell differentiation","type":"exact"},{"name":"up regulation of endoderm cell differentiation","type":"exact"},{"name":"up regulation of endodermal cell differentiation","type":"exact"},{"name":"up-regulation of endoderm cell differentiation","type":"exact"},{"name":"up-regulation of endodermal cell differentiation","type":"exact"},{"name":"upregulation of endoderm cell differentiation","type":"exact"},{"name":"upregulation of endodermal cell differentiation","type":"exact"}],"termid":"GO:1903226"}


id: PBO:0047936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(12)(q24)","termid":"PBO:0047936"}


id: PBO:0074378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 4","termid":"PBO:0074378"}


id: GO:1902433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of water channel activity that is involved in maintenance of lens transparency.","definition_xrefs":["PMID:22095752","GOC:nhn","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of water channel activity involved in maintenance of lens transparency (obsolete GO:1902433)","synonyms":[{"name":"activation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"activation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"activation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in maintenance of lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in preservation of lens transparency","type":"narrow"},{"name":"aquaporin activation involved in maintenance of lens transparency","type":"narrow"},{"name":"aquaporin activation involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"aquaporin activation involved in preservation of lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"positive regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"positive regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"up regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"up regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"up regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"up regulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"up regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"up regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"up-regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"up-regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"up-regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"up-regulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"up-regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"up-regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"upregulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"upregulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"upregulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"upregulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"upregulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"upregulation of water channel activity involved in preservation of lens transparency","type":"exact"}],"termid":"GO:1902433"}


id: FYECO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 24-48h. This medium is then replaced with nitrogen containing rich medium and cells are allowed to grow for 12-24h.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"24-48h nitrogen starvation followed by 12-24h recovery in rich medium","termid":"FYECO:0000097"}


id: PBO:0088599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-Golgi network aminophospholipid translocase (flippase), Dnf1","termid":"PBO:0088599"}


id: PBO:0017512
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuberous Sclerosis","termid":"PBO:0017512"}


id: PBO:0064935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase targeting COQ7","termid":"PBO:0064935"}


id: PBO:0090371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Bms1","termid":"PBO:0090371"}


id: PBO:0086202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; required for the stability of Oli1p (Atp9p) mRNA; also required for the Oli1p ring formation; YMR098C is not an essential gene","termid":"PBO:0086202"}


id: GO:0036163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid -> 2-hexaprenyl-6-methoxyphenol + CO2.","definition_xrefs":["PMID:620805","GOC:mw","PMID:7028108","KEGG_REACTION:R06866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hexaprenyl-4-hydroxy-5-methoxybenzoic acid decarboxylase activity","secondary_identifiers":["RHEA:44768"],"termid":"GO:0036163"}


id: MONDO:0000629
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"}]},"cv_name":"mondo","definition":"A benign neoplasm that involves the cardiovascular system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"cardiovascular organ benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843462","DOID:0060091","UMLS:C0848083"],"synonyms":[{"name":"cardiovascular system benign neoplasm","type":"exact"}],"termid":"MONDO:0000629","terms_by_termid":{"MONDO:0007154":null},"xrefs":{"Monarch":{"xref_id":"0000629"}}}


id: PBO:0047722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile X messenger ribonucleoprotein 1","termid":"PBO:0047722"}


id: GO:0014006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage differentiation","termid":"GO:0045649"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglia differentiation","synonyms":[{"name":"regulation of microglial cell differentiation","type":"exact"}],"termid":"GO:0014006"}


id: GO:0035029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to leading edge cell fate during dorsal closure. Leading edge cells are the dorsal-most cells of the migrating epidermis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell fate commitment","termid":"GO:0035027"},{"relation_name":"part_of","term_name":"dorsal closure, leading edge cell differentiation","termid":"GO:0046663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell fate commitment","termid":"GO:0035029"}


id: GO:0006941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within striated muscle tissue, resulting in the shortening of the muscle. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope.","definition_xrefs":["ISBN:0198506732","GOC:mtg_muscle","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle contraction","synonyms":[{"name":"sarcomeric muscle contraction","type":"exact"}],"termid":"GO:0006941"}


id: PBO:0001935
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates nmt1","termid":"PBO:0001935"}


id: PBO:0109640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1K (pseudogene)","termid":"PBO:0109640"}


id: PBO:0039019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aftiphilin","termid":"PBO:0039019"}


id: GO:1901035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamine import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of L-glutamine import across plasma membrane","termid":"GO:1901034"},{"relation_name":"is_a","term_name":"negative regulation of glutamine transport","termid":"GO:2000486"},{"relation_name":"negatively_regulates","term_name":"L-glutamine import across plasma membrane","termid":"GO:1903803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-glutamine import across plasma membrane","synonyms":[{"name":"down regulation of L-glutamine import","type":"exact"},{"name":"down regulation of L-glutamine uptake","type":"exact"},{"name":"down-regulation of L-glutamine import","type":"broad"},{"name":"down-regulation of L-glutamine uptake","type":"exact"},{"name":"downregulation of L-glutamine import","type":"exact"},{"name":"downregulation of L-glutamine uptake","type":"exact"},{"name":"inhibition of L-glutamine import","type":"narrow"},{"name":"inhibition of L-glutamine uptake","type":"exact"},{"name":"negative regulation of L-glutamine import","type":"broad"},{"name":"negative regulation of L-glutamine uptake","type":"exact"}],"termid":"GO:1901035"}


id: PBO:0072852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 2","termid":"PBO:0072852"}


id: PBO:0120173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; involved in transcription initiation, required for nucleotide excision repair; RING domain hydrophobic loop is required for transcription start site scanning as part of TFIIK, the protein kinase component of TFIIH, at the interface with RNAPII in the pre-initiation complex; RING finger protein similar to mammalian CAK and TFIIH subunit","termid":"PBO:0120173"}


id: PBO:0026948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-entangled_telomeres","termid":"PBO:0026948"}


id: GO:0103043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-ribose 1,2-cyclic phosphate 5-phosphate + H2O = alpha-D-ribose 1,5-bisphosphate + H+.","definition_xrefs":["EC:3.1.4.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphoribosyl 1,2-cyclic phosphate phosphodiesterase activity","secondary_identifiers":["RHEA:34795","MetaCyc:RXN0-6710"],"synonyms":[{"name":"5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase activity","type":"related"}],"termid":"GO:0103043"}


id: GO:0060271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:BHF","GOC:pr","PMID:13978319","GOC:vw","ISBN:0198506732","GOC:cilia","PMID:27350441","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cilium assembly","secondary_identifiers":["Reactome:R-HSA-5617833","GO:0042384"],"synonyms":[{"name":"ciliogenesis","type":"exact"},{"name":"cilium biogenesis","type":"related"},{"name":"cilium formation","type":"exact"},{"name":"cilium morphogenesis","type":"related"},{"name":"cilium organization","type":"related"},{"name":"microtubule-based flagellum assembly","type":"exact"}],"termid":"GO:0060271"}


id: MOD:01563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01563"}


id: MONDO:0007928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Fechtner syndrome (obsolete MONDO:0007928)","secondary_identifiers":["NCIT:C131642"],"termid":"MONDO:0007928","xrefs":{"Monarch":{"xref_id":"0007928"}}}


id: MONDO:1011541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ichthyosis, non-human animal","termid":"MONDO:1011427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, cattle","secondary_identifiers":["OMIA:001993-9913"],"termid":"MONDO:1011541","xrefs":{"Monarch":{"xref_id":"1011541"}}}


id: PATO:0001128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001128 absolute work value (obsolete PATO:0001128)","termid":"PATO:0001128"}


id: MONDO:0018889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of beta-myosin heavy chain (MYH7)","termid":"MONDO:0016195"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"hyaline body myopathy","secondary_identifiers":["GARD:7148","DOID:0111267","icd11.foundation:352828432","Orphanet:53698"],"synonyms":[{"name":"myosin storage myopathy","type":"exact"}],"termid":"MONDO:0018889","xrefs":{"Monarch":{"xref_id":"0018889"}}}


id: PBO:0059957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 2","termid":"PBO:0059957"}


id: PBO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_morphogenesis_of","termid":"PBO:0034421"}


id: GO:1903695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any MAPK cascade that is involved in ascospore formation.","definition_xrefs":["GO_REF:0000060","PMID:8443406","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK cascade involved in ascospore formation (obsolete GO:1903695)","synonyms":[{"name":"ERK/MAPK cascade involved in ascospore biosynthesis","type":"narrow"},{"name":"ERK/MAPK cascade involved in ascospore formation","type":"narrow"},{"name":"MAP kinase cascade involved in ascospore biosynthesis","type":"exact"},{"name":"MAP kinase cascade involved in ascospore formation","type":"exact"},{"name":"MAP kinase kinase kinase cascade involved in ascospore biosynthesis","type":"exact"},{"name":"MAP kinase kinase kinase cascade involved in ascospore formation","type":"exact"},{"name":"MAPK cascade involved in ascospore biosynthesis","type":"exact"},{"name":"MAPK signal transduction involved in ascospore biosynthesis","type":"exact"},{"name":"MAPK signal transduction involved in ascospore formation","type":"exact"},{"name":"MAPK signaling involved in ascospore biosynthesis","type":"related"},{"name":"MAPK signaling involved in ascospore formation","type":"related"},{"name":"MAPK signalling involved in ascospore biosynthesis","type":"related"},{"name":"MAPK signalling involved in ascospore formation","type":"related"},{"name":"MAPKKK cascade during sporulation involved in ascospore biosynthesis","type":"narrow"},{"name":"MAPKKK cascade during sporulation involved in ascospore formation","type":"narrow"},{"name":"MAPKKK cascade involved in ascospore biosynthesis","type":"exact"},{"name":"MAPKKK cascade involved in ascospore formation","type":"exact"},{"name":"mitogen-activated protein kinase cascade involved in ascospore biosynthesis","type":"exact"},{"name":"mitogen-activated protein kinase cascade involved in ascospore formation","type":"exact"}],"termid":"GO:1903695"}


id: PBO:0012533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_participant","termid":"PBO:0012533"}


id: GO:0048301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgD isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgD isotypes","termid":"GO:0048299"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgD isotypes","termid":"GO:0048292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgD isotypes","synonyms":[{"name":"activation of isotype switching to IgD isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgD isotypes","type":"exact"},{"name":"positive regulation of class switching to IgD isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgD isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgD isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgD isotypes","type":"exact"}],"termid":"GO:0048301"}


id: MONDO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A focal dystonia of the pelvic floor muscles during attempted defecation.","definition_xrefs":["Wikipedia:Anismus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"anismus","secondary_identifiers":["UMLS:C0267601","ICD9:569.49","DOID:0050839","MEDGEN:540810","SCTID:83605009"],"synonyms":[{"name":"anal region skeletal muscle focal dystonia","type":"exact"},{"name":"dyskinetic puborectalis","type":"related"},{"name":"dyssynergic defecation","type":"related"},{"name":"focal dystonia of anal region skeletal muscle","type":"exact"},{"name":"puborectalis syndrome","type":"related"},{"name":"rectosphincteric dyssynergia","type":"related"},{"name":"spastic pelvic floor syndrome","type":"related"},{"name":"sphincteric disobedience syndrome","type":"related"}],"termid":"MONDO:0000480","xrefs":{"Monarch":{"xref_id":"0000480"}}}


id: PBO:0065149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 1 pseudogene 1","termid":"PBO:0065149"}


id: PBO:0049036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 25","termid":"PBO:0049036"}


id: GO:0003838
data:
  {"annotated_genes":["SJAG_03531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78185],"is_not":false,"summary":null,"term":"GO:0003838"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + zymosterol = fecosterol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:21128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"sterol 24-C-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0102101","EC:2.1.1.41","MetaCyc:RXN3O-178"],"synonyms":[{"name":"24-sterol C-methyltransferase activity","type":"related"},{"name":"S-adenosyl-4-methionine:sterol Delta(24)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-4-methionine:sterol delta24-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:Delta(24(23))-sterol methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:Delta24(23)-sterol methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:zymosterol 24-C-methyltransferase activity","type":"related"},{"name":"SMT1 activity","type":"narrow"},{"name":"delta(24)-methyltransferase activity","type":"related"},{"name":"delta(24)-sterol C-methyltransferase activity","type":"exact"},{"name":"delta(24)-sterol methyltransferase activity","type":"related"},{"name":"delta24-methyltransferase activity","type":"related"},{"name":"delta24-sterol methyltransferase activity","type":"related"},{"name":"phytosterol methyltransferase activity","type":"narrow"},{"name":"sterol 24C methyltransferase activity","type":"exact"},{"name":"zymosterol-24-methyltransferase activity","type":"narrow"}],"termid":"GO:0003838","terms_by_termid":{"GO:0003838":null}}


id: MONDO:0020653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the vagina. Morphologic variants include the clear cell, endometrioid, mesonephric, and mucinous adenocarcinoma.","definition_xrefs":["NCIT:C7981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"vaginal carcinoma","termid":"MONDO:0015867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal adenocarcinoma","secondary_identifiers":["MEDGEN:124643","UMLS:C0279668","ONCOTREE:VA"],"synonyms":[{"name":"adenocarcinoma of the vagina","type":"exact"},{"name":"adenocarcinoma of vagina","type":"exact"},{"name":"vagina adenocarcinoma","type":"exact"},{"name":"vaginal adenocarcinoma","type":"exact"}],"termid":"MONDO:0020653","xrefs":{"Monarch":{"xref_id":"0020653"}}}


id: MONDO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disabling osteochondrodysplasia with osteosclerosis, cone-shaped metaphysis, and shortening of the diaphysis. It is endemic in parts of Siberia and northern China. Mineral deficiencies (e.g., selenium, iodine), fungal cereal contamination, and water contamination may be contributing factors in its etiology.","definition_xrefs":["MESH:D057767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Kashin-Beck disease","secondary_identifiers":["ICD9:716.08","ICD9:716.00","EFO:0006511","MEDGEN:412531","ICD9:716.06","UMLS:C2745963","icd11.foundation:211396970","SCTID:270505009"],"termid":"MONDO:0005610","xrefs":{"Monarch":{"xref_id":"0005610"}}}


id: PBO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of leptomycin B","termid":"PBO:0001741"}


id: PATO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A bacterial mating type indicating the presence of F plasmid in a bacterial cell.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial mating type","termid":"PATO:0001335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F mating type","termid":"PATO:0001347"}


id: PBO:0074244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1","termid":"PBO:0074244"}


id: FYPO:0006431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"enlarged mitotic spindle pole body","synonyms":[{"name":"enlarged mitotic SPB","type":"exact"},{"name":"enlarged spindle pole body during mitotic cell cycle","type":"exact"},{"name":"enlarged spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006431"}


id: PBO:0047750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, alpha","termid":"PBO:0047750"}


id: SO:1000182
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_variation","termid":"SO:0000240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_number_variation","synonyms":[{"name":"Jannovar:chromosome_number_variation","type":"exact"},{"name":"chromosome number variation","type":"exact"}],"termid":"SO:1000182"}


id: PBO:0063665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins 2","termid":"PBO:0063665"}


id: PBO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 6","termid":"PBO:0048237"}


id: GO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060768"}


id: PBO:0074506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 5","termid":"PBO:0074506"}


id: PBO:0112594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxidoreductase for ubiquinone biosynthesis","termid":"PBO:0112594"}


id: GO:0140670
data:
  {"annotated_genes":["SJAG_02606","SJAG_04508"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72181,112382],"is_not":false,"summary":null,"term":"GO:0140670"}]},"cv_name":"molecular_function","definition":"Facilitating a conformational change to unload a cohesin complex from sister chromatids.","definition_xrefs":["PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cohesin unloader activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cohesin unloading activity","type":"exact"}],"termid":"GO:0140670","terms_by_termid":{"GO:0140670":null}}


id: GO:0110131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that localizes to actin cortical patches at sites of endocytosis and negatively regulates barbed end F-actin assembly, resulting in the generation of free actin pools. The Aim21-Tda2 complex is necessary for efficient endocytosis and balancing the distribution of actin between patches and cables.","definition_xrefs":["GOC:rn","PMID:28706108","PMID:29467252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cortical patch","termid":"GO:0030479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0030479"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0030479","GO:0015629","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"Aim21-Tda2 complex","synonyms":[{"name":"Aim21/Tda2 complex","type":"exact"}],"termid":"GO:0110131"}


id: GO:0090630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of GTPase activity","termid":"GO:0043547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of GTPase activity","secondary_identifiers":["GO:0032860","GO:0032862","GO:0032861","GO:0032863","GO:0032858","GO:0032864","GO:0032856","GO:0032859","GO:0032857"],"synonyms":[{"name":"ARF GTPase activation","type":"narrow"},{"name":"Cdc42 GTPase activation","type":"narrow"},{"name":"Rab GTPase activation","type":"narrow"},{"name":"Rac GTPase activation","type":"narrow"},{"name":"Ral GTPase activation","type":"narrow"},{"name":"Ran GTPase activation","type":"narrow"},{"name":"Rap GTPase activation","type":"narrow"},{"name":"Ras GTPase activation","type":"narrow"},{"name":"Rho GTPase activation","type":"narrow"},{"name":"activation of ARF GTPase activity","type":"narrow"},{"name":"activation of Cdc42 GTPase activity","type":"narrow"},{"name":"activation of Rab GTPase activity","type":"narrow"},{"name":"activation of Rac GTPase activity","type":"narrow"},{"name":"activation of Ral GTPase activity","type":"narrow"},{"name":"activation of Ran GTPase activity","type":"narrow"},{"name":"activation of Rap GTPase activity","type":"narrow"},{"name":"activation of Ras GTPase activity","type":"narrow"},{"name":"activation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0090630"}


id: PBO:0092031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucg), mitochondrial","termid":"PBO:0092031"}


id: PBO:0043256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLDN14 antisense RNA 1","termid":"PBO:0043256"}


id: PBO:0086752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site; YOL024W has a paralog, IGD1, that arose from the whole genome duplication","termid":"PBO:0086752"}


id: PBO:0077151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 2","termid":"PBO:0077151"}


id: PBO:0079308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 4","termid":"PBO:0079308"}


id: FYPO:0000495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrial transport","synonyms":[{"name":"abnormal mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial transport during vegetative growth","type":"exact"},{"name":"mitochondrial transport: abnormal","type":"related"}],"termid":"FYPO:0000495"}


id: PBO:0085240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; has a potential role in the secretory pathway; CPR4 has a paralog, CPR8, that arose from the whole genome duplication","termid":"PBO:0085240"}


id: GO:1901575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance catabolic process (obsolete GO:1901575)","synonyms":[{"name":"organic molecular entity catabolic process","type":"exact"},{"name":"organic substance breakdown","type":"exact"},{"name":"organic substance catabolism","type":"exact"},{"name":"organic substance degradation","type":"exact"}],"termid":"GO:1901575"}


id: PBO:0086797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR184W is not an essential gene","termid":"PBO:0086797"}


id: GO:0030137
data:
  {"annotated_genes":["SJAG_01285","SJAG_04391","SJAG_00192","SJAG_04569","SJAG_01508","SJAG_04002","SJAG_04474","SJAG_03368","SJAG_04402","SJAG_01927","SJAG_02482","SJAG_04070","SJAG_02234","SJAG_01025","SJAG_02160"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93384,94913,101302,115976],"is_not":false,"summary":null,"term":"GO:0030137"},{"annotations":[65234,79712,80028,108935,72546,95000,81588,100232,75320],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[64225,58162],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030663"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport.","definition_xrefs":["PMID:11252894","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi-associated vesicle","termid":"GO:0005798"},{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_01025":null,"SJAG_01285":null,"SJAG_01508":null,"SJAG_01927":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02482":null,"SJAG_03368":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04569":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"COPI-coated vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"synonyms":[{"name":"coatomer","type":"related"}],"termid":"GO:0030137","terms_by_termid":{"GO:0030126":null,"GO:0030137":null,"GO:0030663":null}}


id: PBO:0086604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression regulated by copper levels","termid":"PBO:0086604"}


id: PBO:0030084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_tip","termid":"PBO:0030084"}


id: MONDO:0014303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare and complex form of hereditary spastic paraplegia (see this term), reported in only 4 patients from 2 families to date, characterized by spastic paraplegia (presenting between the ages of 1 to 4 years with abnormal gait) associated with microcephaly, amyotrophy, cerebellar signs (e.g. dysarthria) aggressiveness, delayed puberty and mild to moderate intellectual disability. SPG64 is due to mutations in the ENTPD1 gene (10q24.1), encoding ectonucleoside triphosphate diphosphohydrolase 1.","definition_xrefs":["Orphanet:401810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 64","secondary_identifiers":["DOID:0110815","UMLS:C3810289","GARD:17659","MEDGEN:816619","SCTID:726609005","OMIM:615683"],"synonyms":[{"name":"ENTPD1 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG64","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in ENTPD1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 64","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 64","type":"exact"},{"name":"hereditary spastic paraplegia type 64","type":"exact"},{"name":"spastic paraplegia 64, autosomal recessive","type":"related"}],"termid":"MONDO:0014303","xrefs":{"Monarch":{"xref_id":"0014303"}}}


id: SO:1001197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that has the quality dicistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"dicistronic","termid":"SO:0000879"},{"relation_name":"is_a","term_name":"dicistronic_transcript","termid":"SO:0000079"},{"relation_name":"is_a","term_name":"polycistronic_primary_transcript","termid":"SO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic_primary_transcript","synonyms":[{"name":"dicistronic primary transcript","type":"exact"}],"termid":"SO:1001197"}


id: GO:0071599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the otic vesicle over time, from its formation to the mature structure. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"inner ear development","termid":"GO:0048839"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle development","termid":"GO:0071599"}


id: MONDO:0019218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anomalies of bile acid synthesis are a group of sterol metabolism disorders due to enzyme deficiencies of bile acid synthesis (BAS) in infants, children and adults, with variable manifestations that include cholestasis, neurological disease, and fat malabsorption. Nine inborn errors have been described, 7 of which lead to liver cholestasis.","definition_xrefs":["Orphanet:79168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"sterol metabolism disorder","termid":"MONDO:0019256"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"inborn disorder of bile acid synthesis","secondary_identifiers":["NORD:854","GARD:18949","GTR:AN0923838","UMLS:C0400973","NANDO:2200506","MEDGEN:98324"],"synonyms":[{"name":"Bile Acid Synthesis Disorders","type":"exact"},{"name":"disorder of bile acid synthesis","type":"related"},{"name":"inborn bile acid biosynthetic process disorder","type":"exact"},{"name":"inborn error of bile acid biosynthetic process","type":"exact"},{"name":"inborn errors of bile acid synthesis","type":"related"},{"name":"rare inborn error of bile acid biosynthetic process","type":"exact"}],"termid":"MONDO:0019218","xrefs":{"Monarch":{"xref_id":"0019218"}}}


id: GO:0090552
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is the apical most portion of a unicellular trichome.","definition_xrefs":["PO:0025537","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome apex","termid":"GO:0090552"}


id: MONDO:0010998
data:
  {"annotated_genes":["SJAG_04952"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88247],"is_not":false,"summary":null,"term":"MONDO:0010998"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by severe neurological involvement, including hypotonia, developmental delay, intellectual disability, postnatal microcephaly, and progressive brain and cerebellar atrophy. Epilepsy with hypsarrythmia is frequently reported. Additional features that may be observed include failure to thrive, arthrogryposis multiplex congenita (AMC), vision impairment (optic atrophy, iris coloboma) and facial dysmorphism (hypertelorism with a broad nasal bridge, large and thick ears, thin lips, micrognathia). The disease is caused by loss of function mutations of the gene ALG3 (3q27.3).","definition_xrefs":["Orphanet:79321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"ALG3-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080556","GARD:9827","MESH:C535742","OMIM:601110","MEDGEN:322026","NCIT:C126870","SCTID:720976009","UMLS:C1832736"],"synonyms":[{"name":"ALG3-CDG","type":"exact"},{"name":"ALG3-CDG (CDG-Id)","type":"related"},{"name":"ALG3-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1D","type":"related"},{"name":"CDG Id","type":"related"},{"name":"CDG syndrome type Id","type":"exact"},{"name":"CDG-Id","type":"exact"},{"name":"CDG1D","type":"exact"},{"name":"CDGId","type":"exact"},{"name":"CDGS, type IV","type":"related"},{"name":"CDGS, type IV, formerly","type":"related"},{"name":"CDGS4 (formerly)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Id","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type IV (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type IV","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type IV, formerly","type":"related"},{"name":"congenital disorder of glycosylation type 1d","type":"exact"},{"name":"congenital disorder of glycosylation type Id","type":"exact"},{"name":"congenital disorder of glycosylation, type Id","type":"related"},{"name":"mannosyltransferase 6 deficiency","type":"exact"}],"termid":"MONDO:0010998","terms_by_termid":{"MONDO:0010998":null},"xrefs":{"Monarch":{"xref_id":"0010998"}}}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: MONDO:0010435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"},{"relation_name":"is_a","term_name":"GPR143-related foveal hypoplasia","termid":"MONDO:0700230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 6, congenital, X-linked","secondary_identifiers":["UMLS:C3151752","MEDGEN:463102","OMIM:300814","DOID:0111795"],"synonyms":[{"name":"NYS6","type":"related"},{"name":"NYSTAGMUS 6, congenital, X-linked","type":"related"},{"name":"nystagmus 6, congenital, X-linked","type":"exact"},{"name":"nystagmus 6, congenital, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010435","xrefs":{"Monarch":{"xref_id":"0010435"}}}


id: PBO:0072137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 14","termid":"PBO:0072137"}


id: PBO:0083735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of CPF (cleavage and polyadenylation factor); involved in 3' end formation of snoRNA and mRNA; interacts directly with Pta1p; relocalizes to the cytosol in response to hypoxia; similar to mammalian Cleavage-Stimulation Factor CstF-64","termid":"PBO:0083735"}


id: MONDO:0012552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple endocrine neoplasia type 4 (MEN4) is a very rare form of MEN, an inherited cancer syndrome, characterized by parathyroid and anterior pituitary tumors, possibly associated with adrenal, renal, and reproductive organ tumors.","definition_xrefs":["Orphanet:276152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple endocrine neoplasia","termid":"MONDO:0017169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"multiple endocrine neoplasia type 4","secondary_identifiers":["icd11.foundation:157945677","NCIT:C157449","OMIM:610755","UMLS:C1970712","GARD:17275","SCTID:715907003","DOID:0080137","MEDGEN:373469","MESH:C567059"],"synonyms":[{"name":"CDKN1B multiple endocrine neoplasia","type":"exact"},{"name":"MEN4","type":"exact"},{"name":"multiple endocrine neoplasia caused by mutation in CDKN1B","type":"exact"},{"name":"multiple endocrine neoplasia type 4","type":"exact"},{"name":"multiple endocrine neoplasia, type 4","type":"related"},{"name":"multiple endocrine neoplasia, type IV","type":"exact"}],"termid":"MONDO:0012552","xrefs":{"Monarch":{"xref_id":"0012552"}}}


id: GO:0043090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids into a cell or organelle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"amino acid import","synonyms":[{"name":"amino acid uptake","type":"exact"}],"termid":"GO:0043090"}


id: MONDO:0000898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant form of hemangioma.","definition_xrefs":["MONDO:patterns/malignant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hemangioma","secondary_identifiers":["UMLS:C0474836","DOID:0080189","MEDGEN:634243"],"synonyms":[{"name":"hemangioma, malignant","type":"exact"}],"termid":"MONDO:0000898","xrefs":{"Monarch":{"xref_id":"0000898"}}}


id: PBO:0078800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 18-1","termid":"PBO:0078800"}


id: MONDO:0013169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"5p13 microduplication syndrome is a rare partial autosomal trisomy/tetrasomy characterized by global developmental delay, intellectual disability, autistic behavior, muscular hypotonia, macrocephaly and facial dysmorphism (frontal bossing, short palpebral fissures, low set, dysplastic ears, short or shallow philtrum, high arched or narrow palate, micrognathia). Other associated clinical features include sleep disturbances, seizures, aplasia/hypoplasia of the corpus callosum, skeletal abnormalities (large hands and feet, long fingers and toes, talipes).","definition_xrefs":["Orphanet:329802"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial trisomy/tetrasomy of the short arm of chromosome 5","termid":"MONDO:0016942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5p13 duplication syndrome","secondary_identifiers":["GARD:17505","MEDGEN:416385","OMIM:613174","UMLS:C2750805","MESH:C567717","DOID:0060460"],"synonyms":[{"name":"5p13 microduplication syndrome","type":"exact"},{"name":"chromosome 5p13 duplication syndrome","type":"exact"},{"name":"chromosome 5p13 duplication syndrome, isolated cases","type":"exact"},{"name":"dup(5)(p13)","type":"exact"},{"name":"trisomy 5p13","type":"exact"}],"termid":"MONDO:0013169","xrefs":{"Monarch":{"xref_id":"0013169"}}}


id: GO:0019752
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id: PATO:0000443
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id: MONDO:0005474
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id: GO:0008890
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