# terms

id: PBO:0012544
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ApsixA hydrolase","termid":"PBO:0012544"}


id: PBO:0085750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in Slt2p mitogen-activated (MAP) kinase signaling pathway; interacts with numerous components in the mating pheromone and CWI MAPK pathways; associates with Rlm1p; KDX1 has a paralog, SLT2, that arose from the whole genome duplication","termid":"PBO:0085750"}


id: GO:1904838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male germ-line stem cell asymmetric division.","definition_xrefs":["GOC:TermGenie","PMID:19339709","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of stem cell division","termid":"GO:2000035"},{"relation_name":"regulates","term_name":"male germ-line stem cell asymmetric division","termid":"GO:0048133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male germ-line stem cell asymmetric division","synonyms":[{"name":"regulation of male germ-line stem cell renewal","type":"exact"}],"termid":"GO:1904838"}


id: PBO:0043400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMKLR2 antisense RNA","termid":"PBO:0043400"}


id: PBO:0061348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 6","termid":"PBO:0061348"}


id: PBO:0072891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 2","termid":"PBO:0072891"}


id: PBO:0044488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 39 subfamily A member 1","termid":"PBO:0044488"}


id: GO:0031263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + amine(out) = ADP + phosphate + amine(in).","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled amine transporter activity (obsolete GO:0031263)","synonyms":[{"name":"ATP-dependent amine transporter activity","type":"exact"},{"name":"amine ABC transporter","type":"narrow"},{"name":"amine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031263"}


id: GO:1990916
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outermost layers of the spore wall, as described in Schizosaccharomyces pombe.","definition_xrefs":["PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ascospore wall","termid":"GO:0005619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"Isp3 layer of spore wall","termid":"GO:1990916"}


id: PBO:0061126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family member X1","termid":"PBO:0061126"}


id: GO:1990361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of pyruvate kinase activity. PKM2 only exists as homotetramer when bound to beta-d-fructofuranose 1,6-bisphosphate (CHEBI:28013).","definition_xrefs":["GOC:bhm","PMID:24606918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate kinase complex","termid":"GO:1902912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PKM2 pyruvate kinase complex","synonyms":[{"name":"PKM2 homotetramer","type":"exact"}],"termid":"GO:1990361"}


id: MONDO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia, hypotonia, and respiratory insufficiency syndrome, neonatal lethal","termid":"MONDO:0032931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal pontocerebellar hypoplasia-hypotonia-respiratory insufficiency syndrome due to a point mutation","secondary_identifiers":["Orphanet:615983","GARD:18036","UMLS:C5681819","MEDGEN:1842868"],"termid":"MONDO:0036217","xrefs":{"Monarch":{"xref_id":"0036217"}}}


id: PBO:0005508
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.17.2","termid":"PBO:0005508"}


id: PBO:0008421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi matrix protein Rud3 (predicted)","termid":"PBO:0008421"}


id: PBO:0078244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 23-1 (non-functional)","termid":"PBO:0078244"}


id: MONDO:0011805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the PTGDR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 1","secondary_identifiers":["OMIM:607277","MEDGEN:339547","UMLS:C1846534"],"synonyms":[{"name":"AS1","type":"related"},{"name":"ASRT1","type":"related"},{"name":"PTGDR inherited susceptibility to asthma","type":"exact"},{"name":"asthma, susceptibility to, 1","type":"exact"},{"name":"asthma-related traits, susceptibility to, 1","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 1","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in PTGDR","type":"exact"}],"termid":"MONDO:0011805","xrefs":{"Monarch":{"xref_id":"0011805"}}}


id: PBO:0076915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 gamma","termid":"PBO:0076915"}


id: GO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a compound eye cone cell.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of compound eye cone cell fate specification","termid":"GO:0042682"},{"relation_name":"negatively_regulates","term_name":"compound eye cone cell fate specification","termid":"GO:0042679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye cone cell fate specification","secondary_identifiers":["GO:0010000"],"synonyms":[{"name":"down regulation of cone cell fate specification","type":"broad"},{"name":"down-regulation of cone cell fate specification","type":"broad"},{"name":"downregulation of cone cell fate specification","type":"broad"},{"name":"inhibition of cone cell fate specification","type":"broad"},{"name":"suppression of cone cell fate","type":"broad"}],"termid":"GO:0042683"}


id: GO:0160236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + taurine + GTP + H2O + uridine34 in tRNA + A = 7,8-dihydrofolate + GDP + phosphate + 5-taurinomethyluridine34 in tRNA + H+ + AH2.","definition_xrefs":["RHEA:83279","PMID:29390138","PMID:33619562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tRNA 5-taurinomethyluridine synthase activity","secondary_identifiers":["MetaCyc:RXN-16822"],"termid":"GO:0160236"}


id: GO:0086083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of a bundle of His cell with a Purkinje myocyte and contributes to the communication between the two cells.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"}],"interesting_parent_ids":["GO:0003674","GO:0098631","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication","termid":"GO:0086083"}


id: PBO:0114870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor GTPase Guf1","termid":"PBO:0114870"}


id: GO:0097017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).","definition_xrefs":["PMID:18431508","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal protein absorption","termid":"GO:0097017"}


id: PBO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell_with_central_constriction","termid":"PBO:0030731"}


id: PBO:0089912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Sal3","termid":"PBO:0089912"}


id: PBO:0004316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear rim protein Amo1","termid":"PBO:0004316"}


id: MONDO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acquired immunodeficiency","secondary_identifiers":["Orphanet:310050","UMLS:C0596032","GARD:21359","icd11.foundation:609223181","MEDGEN:1843453"],"termid":"MONDO:0017769","xrefs":{"Monarch":{"xref_id":"0017769"}}}


id: PBO:0114084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted carbohydrate binding","termid":"PBO:0114084"}


id: PBO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apelin receptor early endogenous ligand","termid":"PBO:0039694"}


id: FYPO:0007323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah","PMID:32071154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal stress granule assembly during vegetative growth","termid":"FYPO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal stress granule assembly during cellular response to heat","synonyms":[{"name":"normal cytoplasmic stress granule assembly during cellular response to heat","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal stress granule assembly during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat stress","type":"exact"},{"name":"normal stress granule formation during cellular response to heat","type":"exact"}],"termid":"FYPO:0007323"}


id: PBO:0058762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6886","termid":"PBO:0058762"}


id: FYPO:0006990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger portion of the chromosome than normal in regions containing protein-coding genes.","definition_xrefs":["PomBase:mah","PMID:26518661","GO:0031509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased spatial extent of heterochromatin assembly at protein coding gene","synonyms":[{"name":"heterochromatin spreading at protein coding gene","type":"related"},{"name":"increased spatial extent of heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"increased spatial extent of heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0006990"}


id: MONDO:0009635
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87052,87053],"is_not":false,"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","definition":"Microvillus inclusion disease (MVID) is a very rare, severe, malabsorbative syndrome characterized clinically by protracted or intractable neonatal secretory diarrhea and histologically by inclusion bodies on the intestinal epithelium.","definition_xrefs":["Orphanet:2290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital secretory diarrhea","termid":"MONDO:0045032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"microvillus inclusion disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:137954","GARD:7039","DOID:0060775","ICD9:579.8","NANDO:2100255","NORD:1446","NANDO:2200913","SCTID:235729009","UMLS:C0341306","OMIM:251850","MedDRA:10068494"],"synonyms":[{"name":"DIAR2","type":"related"},{"name":"Davidson disease","type":"exact"},{"name":"Davidson's disease","type":"related"},{"name":"MVD","type":"exact"},{"name":"MVID","type":"exact"},{"name":"MYO5B secretory diarrhea","type":"exact"},{"name":"MYO5B secretory diarrhoea","type":"exact"},{"name":"congenital familial protracted diarrhea","type":"related"},{"name":"congenital familial protracted diarrhea with enterocyte Brush-border abnormalities","type":"related"},{"name":"congenital familial protracted diarrhea with enterocyte brush-border abnormalities","type":"exact"},{"name":"congenital familial protracted diarrhoea","type":"related"},{"name":"congenital familial protracted diarrhoea with enterocyte Brush-border abnormalities","type":"related"},{"name":"congenital familial protracted diarrhoea with enterocyte brush-border abnormalities","type":"exact"},{"name":"congenital microvillous atrophy","type":"exact"},{"name":"congenital microvillus atrophy","type":"exact"},{"name":"diarrhea 2 with microvillus atrophy","type":"exact"},{"name":"diarrhea 2, with microvillus atrophy","type":"related"},{"name":"diarrhoea 2 with microvillus atrophy","type":"exact"},{"name":"diarrhoea 2, with microvillus atrophy","type":"related"},{"name":"familial enteropathy, microvillus","type":"related"},{"name":"intractable diarrhea of infancy","type":"related"},{"name":"intractable diarrhoea of infancy","type":"related"},{"name":"microvillous inclusion disease","type":"exact"},{"name":"microvillus atrophy, congenital","type":"related"},{"name":"microvillus inclusion disease","type":"exact"},{"name":"secretory diarrhea caused by mutation in MYO5B","type":"exact"},{"name":"secretory diarrhoea caused by mutation in MYO5B","type":"exact"}],"termid":"MONDO:0009635","terms_by_termid":{"MONDO:0009635":null},"xrefs":{"Monarch":{"xref_id":"0009635"}}}


id: PR:O59681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18E5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.01","synonyms":[{"name":"Spom972h-SPBC18E5.01","type":"exact"}],"termid":"PR:O59681"}


id: GO:1903659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of complement-dependent cytotoxicity.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24280217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"regulates","term_name":"complement-dependent cytotoxicity","termid":"GO:0097278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of complement-dependent cytotoxicity","termid":"GO:1903659"}


id: PBO:0087756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface","termid":"PBO:0087756"}


id: PBO:0065788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1 pseudogene 1","termid":"PBO:0065788"}


id: PBO:0058252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4539","termid":"PBO:0058252"}


id: PBO:0027662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteasomal_ubiquitin-dependent_protein_degradation","termid":"PBO:0027662"}


id: PBO:0066249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMS3 antisense RNA 2","termid":"PBO:0066249"}


id: PBO:0060834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 like E3 ubiquitin protein ligase","termid":"PBO:0060834"}


id: PBO:0034059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_start_sequence_of","termid":"PBO:0034059"}


id: PBO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit A Pcf1","termid":"PBO:0090606"}


id: PBO:0072210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 9","termid":"PBO:0072210"}


id: MONDO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy (obsolete MONDO:0000206)","synonyms":[{"name":"obsolete cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy; CADASIL","type":"exact"}],"termid":"MONDO:0000206","xrefs":{"Monarch":{"xref_id":"0000206"}}}


id: GO:0120516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a diacylglycerol + H2O = a fatty acid + a monoacylglycerol + H+.","definition_xrefs":["RHEA:32731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol lipase activity","secondary_identifiers":["MetaCyc:RXN-19279"],"termid":"GO:0120516"}


id: GO:0033787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cob(I)alamin + hydrogen cyanide + NADP+ = cyanocob(III)alamin + H+ + NADPH.","definition_xrefs":["RHEA:16113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cyanocobalamin reductase (cyanide-eliminating) (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R02999","MetaCyc:1.6.99.12-RXN","EC:1.16.1.6","Reactome:R-HSA-3149519"],"synonyms":[{"name":"NADPH2:cyanocob(III)alamin oxidoreductase (cyanide-eliminating) activity","type":"related"},{"name":"NADPH:cyanocob(III)alamin oxidoreductase (cyanide-eliminating) activity","type":"related"},{"name":"cob(I)alamin, cyanide:NADP+ oxidoreductase activity","type":"related"},{"name":"cyanocobalamin reductase (NADPH, cyanide-eliminating) activity","type":"related"},{"name":"cyanocobalamin reductase (NADPH; CN-eliminating) activity","type":"related"},{"name":"cyanocobalamin reductase activity","type":"related"}],"termid":"GO:0033787"}


id: PR:Q9UT73
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 70 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00682","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C343.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.17c","secondary_identifiers":["UniProtKB:Q9UT73"],"synonyms":[{"name":"Spom972h-WDR70","type":"exact"}],"termid":"PR:Q9UT73"}


id: PR:U3H042
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sos7 gene.","definition_xrefs":["UniProtKB:U3H042","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Sos7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.06","synonyms":[{"name":"Spom972h-sos7","type":"exact"},{"name":"suppressor of spc7 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:U3H042"}


id: FYPO:0003190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule during interphase of the mitotic cell cycle, occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"decreased rate of cytoplasmic microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased interphase microtubule depolymerization rate","type":"exact"},{"name":"decreased rate of cytoplasmic microtubule depolymerization during mitotic interphase","type":"exact"},{"name":"decreased rate of interphase cytoplasmic microtubule depolymerization","type":"exact"},{"name":"decreased rate of interphase microtubule catastrophe","type":"related"},{"name":"decreased rate of interphase microtubule depolymerisation","type":"exact"},{"name":"decreased rate of interphase microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of interphase microtubule depolymerization during vegetative growth","type":"exact"},{"name":"decreased rate of interphase microtubule shrinkage","type":"related"},{"name":"increased interphase microtubule stability","type":"related"},{"name":"reduced rate of interphase microtubule depolymerization","type":"exact"}],"termid":"FYPO:0003190"}


id: GO:1900364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA polyadenylation (obsolete GO:1900364)","synonyms":[{"name":"negative regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900364"}


id: PBO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_nucleation","termid":"PBO:0035785"}


id: PBO:0074867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 51","termid":"PBO:0074867"}


id: PBO:0047767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOS like 2, AP-1 transcription factor subunit","termid":"PBO:0047767"}


id: PBO:0012002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter Mfs1","termid":"PBO:0012002"}


id: PBO:0068669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 50, pseudogene","termid":"PBO:0068669"}


id: PBO:0075562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine kinase 1","termid":"PBO:0075562"}


id: GO:0150151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-17A production.","definition_xrefs":["PMID:27901018","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"regulates","term_name":"interleukin-17A production","termid":"GO:0097087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-17A production","synonyms":[{"name":"regulation of interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0150151"}


id: GO:0034506
data:
  {"annotated_genes":["SJAG_03220","SJAG_01745","SJAG_03449","SJAG_00768","SJAG_00307","SJAG_01082","SJAG_03567","SJAG_00170","SJAG_00207","SJAG_03126","SJAG_00684","SJAG_03491","SJAG_01050","SJAG_04038","SJAG_02778","SJAG_03832","SJAG_01332","SJAG_03183","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72221,89761,90840,91455,107995,112131,113509,115214,116328,118307],"is_not":false,"summary":null,"term":"GO:0034506"},{"annotations":[93100,111481,118996,113779,91828,118360,93840,108106],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061638"},{"annotations":[103855],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"The innermost portion of the centromeric region of a chromosome, encompassing the core region of a chromosome centromere and the proteins that bind to it.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"chromosome, centromeric region","termid":"GO:0000775"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00207":null,"SJAG_00307":null,"SJAG_00646":null,"SJAG_00684":null,"SJAG_00768":null,"SJAG_01050":null,"SJAG_01082":null,"SJAG_01332":null,"SJAG_01745":null,"SJAG_02778":null,"SJAG_03126":null,"SJAG_03183":null,"SJAG_03220":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03567":null,"SJAG_03832":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"chromosome, centromeric core domain","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome, centric core region","type":"related"},{"name":"chromosome, centromeric core region","type":"exact"}],"termid":"GO:0034506","terms_by_termid":{"GO:0034506":null,"GO:0043505":null,"GO:0061638":null}}


id: PR:O13619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP22H7.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P22H7.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.03","synonyms":[{"name":"Spom972h-SPBP22H7.03","type":"exact"}],"termid":"PR:O13619"}


id: MONDO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of ocular misalignment where the visual axes diverge inappropriately. For example, medial rectus muscle weakness may produce this condition as the affected eye will deviate laterally upon attempted forward gaze. An exotropia occurs due to the relatively unopposed force exerted on the eye by the lateral rectus muscle, which pulls the eye in an outward direction.","definition_xrefs":["MESH:D005099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exotropia","termid":"MONDO:0001286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternating exotropia","secondary_identifiers":["SCTID:37214009","UMLS:C0152207","DOID:1142","MEDGEN:101825","ICD10CM:H50.15","icd11.foundation:1611093587","ICD9:378.15"],"termid":"MONDO:0001281","xrefs":{"Monarch":{"xref_id":"0001281"}}}


id: GO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:dph","GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"negatively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney development","synonyms":[{"name":"negative regulation of nephrogenesis","type":"related"}],"termid":"GO:0090185"}


id: PBO:0076814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 2","termid":"PBO:0076814"}


id: PBO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 10","termid":"PBO:0070831"}


id: GO:0039720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed by Baculoviruses. A vesicular structure in which virions are assembled.","definition_xrefs":["PMID:13358757","PMID:1433508","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virogenic stroma","synonyms":[{"name":"VS","type":"exact"}],"termid":"GO:0039720"}


id: SO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_repeat is a single copy of an internal sequence repetition.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_repeat","secondary_identifiers":["BS:00070"],"synonyms":[{"name":"polypeptide repeat","type":"exact"},{"name":"repeat","type":"related"}],"termid":"SO:0001068"}


id: PBO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha o1","termid":"PBO:0048794"}


id: PBO:0078695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 6-1","termid":"PBO:0078695"}


id: PBO:0029637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus","termid":"PBO:0029637"}


id: PBO:0091708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate snoRNA","termid":"PBO:0091708"}


id: PBO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 1","termid":"PBO:0075720"}


id: PATO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000234 visual (obsolete PATO:0000234)","termid":"PATO:0000234"}


id: MONDO:0002658
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the iris.","direct_ancestors":[{"relation_name":"is_a","term_name":"uveal cancer","termid":"MONDO:0002659"},{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"iris cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C4554","UMLS:C0346372","MEDGEN:91103","DOID:3478","SCTID:188264002"],"synonyms":[{"name":"cancer of iris","type":"exact"},{"name":"iris cancer","type":"exact"},{"name":"malignant iris neoplasm","type":"exact"},{"name":"malignant iris tumor","type":"exact"},{"name":"malignant iris tumour","type":"exact"},{"name":"malignant neoplasm of iris","type":"exact"},{"name":"malignant neoplasm of the iris","type":"exact"},{"name":"malignant tumor of iris","type":"exact"},{"name":"malignant tumor of the iris","type":"exact"},{"name":"malignant tumour of iris","type":"exact"},{"name":"malignant tumour of the iris","type":"exact"},{"name":"tumor of the iris","type":"broad"},{"name":"tumour of the iris","type":"broad"}],"termid":"MONDO:0002658","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002658"}}}


id: GO:0030726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the intercellular bridges that connect the germ-line cells of a male cyst.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline ring canal formation","termid":"GO:0030725"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germline ring canal formation","synonyms":[{"name":"spermatocyte ring canal formation","type":"narrow"},{"name":"testicular ring canal formation","type":"narrow"}],"termid":"GO:0030726"}


id: MONDO:0003529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden onset pyelonephritis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyelonephritis","termid":"MONDO:0006939"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute pyelonephritis","secondary_identifiers":["SCTID:36689008","NCIT:C123215","icd11.foundation:441183088","DOID:559","MEDGEN:636072","ICD9:590.1","ICD10CM:N10","UMLS:C0520575"],"synonyms":[{"name":"pyelonephritis, acute","type":"exact"}],"termid":"MONDO:0003529","xrefs":{"Monarch":{"xref_id":"0003529"}}}


id: PBO:0079057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 12-1","termid":"PBO:0079057"}


id: MONDO:0041284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epilepsy that involves the primary motor cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal lobe epilepsy","termid":"MONDO:0002612"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"primary motor cortex epilepsy","secondary_identifiers":["MEDGEN:536338","SCTID:267592003","UMLS:C0234978"],"synonyms":[{"name":"Jacksonian epilepsy","type":"related"},{"name":"epilepsy of primary motor cortex","type":"exact"},{"name":"motor cortex epilepsy","type":"related"},{"name":"primary motor cortex epilepsy","type":"exact"}],"termid":"MONDO:0041284","xrefs":{"Monarch":{"xref_id":"0041284"}}}


id: GO:0097300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:mtg_apoptosis","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed necrotic cell death","secondary_identifiers":["Reactome:R-HSA-5218859"],"synonyms":[{"name":"programmed cell death by necrosis","type":"exact"},{"name":"regulated necrosis","type":"broad"}],"termid":"GO:0097300"}


id: PBO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenylyl_cyclase_activity","termid":"PBO:0030056"}


id: FYPO:0005089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which RNA polymerase II carboxy-terminal domain kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abolished RNA polymerase II carboxy-terminal domain kinase activity","synonyms":[{"name":"RNA polymerase II carboxy-terminal domain kinase activity abolished","type":"exact"}],"termid":"FYPO:0005089"}


id: PBO:0090630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding vezatin family protein involved in peroxisome inheritance Inp2","termid":"PBO:0090630"}


id: PBO:0056211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B6","termid":"PBO:0056211"}


id: MOD:01532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01532"}


id: MONDO:0012757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lung fibrosis-immunodeficiency-46,XX gonadal dysgenesis syndrome is characterized by immune deficiency, gonadal dysgenesis and fatal lung fibrosis. So far, it has been described in two sisters born to consanguineous parents. Both karyotypes were normal female (46,XX). No genetic anomalies could be identified by comparative genome hybridization analysis of their genomes or by analysis of genes known to be associated with these types of anomalies.","definition_xrefs":["Orphanet:137631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lung fibrosis-immunodeficiency-46,XX gonadal dysgenesis syndrome","secondary_identifiers":["MEDGEN:461506","UMLS:C3150156","SCTID:721977007","OMIM:611926","GARD:16947"],"synonyms":[{"name":"immunodeficiency, ovarian dysgenesis, and pulmonary fibrosis","type":"related"}],"termid":"MONDO:0012757","xrefs":{"Monarch":{"xref_id":"0012757"}}}


id: _global:acts_upstream_of_or_within,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"_global:acts_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within,_positive_effect","secondary_identifiers":["RO:0004032"],"termid":"_global:acts_upstream_of_or_within,_positive_effect"}


id: PBO:0079798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B7","termid":"PBO:0079798"}


id: GO:0001897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a symbiont that results in the death of a host cell by means of the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24204713","PMID:27405240","PMID:11423190","PMID:23748204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"cytolysis in another organism","termid":"GO:0051715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cytolysis of host cell","synonyms":[{"name":"cytolysis by organism of host cells","type":"exact"},{"name":"cytolysis by symbiont of host cells","type":"exact"},{"name":"pathogenesis","type":"related"}],"termid":"GO:0001897"}


id: PBO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis eight","termid":"PBO:0002539"}


id: MONDO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of peripheral neuropathy.","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune disorder of peripheral nervous system","termid":"MONDO:0000590"},{"relation_name":"is_a","term_name":"autoimmune disorder of peripheral nervous system","termid":"MONDO:0000590"},{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005244"],"is_obsolete":false,"name":"autoimmune neuropathy","secondary_identifiers":["MEDGEN:1843469","DOID:0040087","DOID:0060499","UMLS:C2748363"],"synonyms":[{"name":"autoimmune peripheral neuropathy","type":"exact"}],"termid":"MONDO:0000774","xrefs":{"Monarch":{"xref_id":"0000774"}}}


id: MONDO:0004901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromes which feature dyskinesias as a cardinal manifestation of the disease process. Included in this category are degenerative, hereditary, post-infectious, medication-induced, post-inflammatory, and post-traumatic conditions.","definition_xrefs":["MESH:D009069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lingual-facial-buccal dyskinesia","secondary_identifiers":["MEDGEN:57747","SCTID:49386006","UMLS:C0152115","DOID:9854","ICD9:333.82"],"synonyms":[{"name":"oro-facial dyskinesia","type":"exact"}],"termid":"MONDO:0004901","xrefs":{"Monarch":{"xref_id":"0004901"}}}


id: FYECO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Nitrogen was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000062 absence of nitrogen (obsolete FYECO:0000062)","termid":"FYECO:0000062"}


id: GO:0019833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of ice crystals in extracellular fluid at relatively high temperatures (up to -2 degrees Celsius) to protect the organism from damage by intracellular ice formation. This process is commonly found in certain bacteria, such as Pseudomonas syringae, and plays roles in environmental adaptation and plant pathogenesis.","definition_xrefs":["PMID:35551271","GOC:cjm","UniProt:KW-0387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ice binding","termid":"GO:0050825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ice nucleation activity","secondary_identifiers":["TC:9.B.133.1.1"],"termid":"GO:0019833"}


id: MONDO:0004395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mixed oligodendroglioma-astrocytoma (obsolete MONDO:0004395)","termid":"MONDO:0004395","xrefs":{"Monarch":{"xref_id":"0004395"}}}


id: PBO:0077345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 86B","termid":"PBO:0077345"}


id: GO:0035778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the pronephric nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:18787069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in pronephros development","termid":"GO:0039014"},{"relation_name":"is_a","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"},{"relation_name":"part_of","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron tubule epithelial cell differentiation","termid":"GO:0035778"}


id: MONDO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of periapical periodontitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"},{"relation_name":"is_a","term_name":"chronic periodontitis","termid":"MONDO:0005593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic apical periodontitis","secondary_identifiers":["UMLS:C0392492","DOID:11269","icd11.foundation:1079140240","ICD10CM:K04.5","ICD9:522.6","MEDGEN:581135","SCTID:718052004"],"synonyms":[{"name":"chronic periapical periodontitis","type":"exact"},{"name":"periapical periodontitis, chronic","type":"exact"}],"termid":"MONDO:0001251","xrefs":{"Monarch":{"xref_id":"0001251"}}}


id: PBO:0083699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein involved in endocytosis and actin patch assembly; functionally redundant with Ent2p; binds clathrin via a clathrin-binding domain motif at C-terminus; relocalizes from bud neck to cytoplasm upon DNA replication stress; ENT1 has a paralog, ENT2, that arose from the whole genome duplication","termid":"PBO:0083699"}


id: MONDO:0008531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete T-complex locus TCP10B (obsolete MONDO:0008531)","secondary_identifiers":["OMIM:187030"],"synonyms":[{"name":"T-complex locus TCP10B","type":"exact"},{"name":"TCP10B","type":"related"}],"termid":"MONDO:0008531","xrefs":{"Monarch":{"xref_id":"0008531"}}}


id: MONDO:0100319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A inflammatory syndrome in adults infected by the SARS-CoV-2 with severe illness requiring hospitalization in a person aged ≥21 years; a positive test result for current or previous SARS-CoV-2 infection (nucleic acid, antigen, or antibody) during admission or in the previous 12 weeks; severe dysfunction of one or more extrapulmonary organ systems (e.g., hypotension or shock, cardiac dysfunction, arterial or venous thrombosis or thromboembolism, or acute liver injury); laboratory evidence of severe inflammation (e.g., elevated CRP, ferritin, D-dimer, or interleukin-6); and absence of severe respiratory illness (to exclude patients in which inflammation and organ dysfunction might be attributable simply to tissue hypoxia).","definition_xrefs":["PMID:33031361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multisystem inflammatory syndrome in children and adults","termid":"MONDO:0035375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COVID-19–associated multisystem inflammatory syndrome in adults","synonyms":[{"name":"MIS-A","type":"exact"}],"termid":"MONDO:0100319","xrefs":{"Monarch":{"xref_id":"0100319"}}}


id: GO:0045266
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the plasma membrane-associated F0 proteins; is thought to prevent futile rotation of the catalytic core. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, stator stalk (obsolete GO:0045266)","synonyms":[{"name":"hydrogen-transporting ATP synthase, stator stalk","type":"broad"},{"name":"proton-transporting ATP synthase, stator stalk","type":"broad"}],"termid":"GO:0045266"}


id: GO:0160239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription halt following transcription initiation but prior to elongation, during which RNA polymerase II pauses approximately 20-60 nucleotides downstream of the transcriptional start site before proceeding into productive elongation. Transcription pausing starts following phosphorylation of the C-terminal domain (CTD) of RNA polymerase II subunit POLR2A at Ser-5 and stops following phosphorylation of POLR2A by the P-TEFb complex.","definition_xrefs":["PMID:33271312","PMID:35816930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription pausing by RNA polymerase II","synonyms":[{"name":"promoter proximal pausing by RNA polymerase II","type":"exact"}],"termid":"GO:0160239"}


id: PBO:0003092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase, decarboxylating","termid":"PBO:0003092"}


id: MONDO:0019701
data:
  {"annotated_genes":["SJAG_02855","SJAG_04810","SJAG_00326","SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[87781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"},{"annotations":[87625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"A rare congenital developmental disorder characterized by the presence of stippled foci of calcification in the hyaline cartilage, joint contractions, mental retardation and ichthyosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_02855":null,"SJAG_04810":null},"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia punctata","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:3052","icd11.foundation:1923035846","ICD9:756.59","MESH:D002806","DOID:2581","ICD10CM:Q77.3","GARD:8542","NANDO:2201017","Orphanet:93442","SCTID:360507004","NCIT:C84632","UMLS:C0008445"],"synonyms":[{"name":"CDP","type":"exact"},{"name":"chondrodysplasia calcificans congenita","type":"exact"},{"name":"chondrodysplasia punctata (stippled epiphyses) Group","type":"exact"},{"name":"chondrodysplasia punctata congenita","type":"exact"}],"termid":"MONDO:0019701","terms_by_termid":{"MONDO:0008972":null,"MONDO:0008974":null,"MONDO:0010621":null,"MONDO:0014743":null},"xrefs":{"Monarch":{"xref_id":"0019701"}}}


id: GO:0008147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of bone","termid":"GO:0008147"}


id: PR:Q9US05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein AATF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00701","PANTHER:PTHR15565:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bfr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.08c","secondary_identifiers":["UniProtKB:Q9US05"],"synonyms":[{"name":"Spom972h-AATF","type":"exact"}],"termid":"PR:Q9US05"}


id: GO:1901687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"glutathione derivative biosynthetic process","secondary_identifiers":["Reactome:R-HSA-156590"],"synonyms":[{"name":"glutathione derivative anabolism","type":"exact"},{"name":"glutathione derivative biosynthesis","type":"exact"},{"name":"glutathione derivative formation","type":"exact"},{"name":"glutathione derivative synthesis","type":"exact"}],"termid":"GO:1901687"}


id: GO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + octadecanoyl-[ACP] + 2 reduced [2Fe-2S]-[ferredoxin] = (9Z)-octadecenoyl-[ACP] + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:11776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"stearoyl-[ACP] desaturase activity","secondary_identifiers":["MetaCyc:RXN-7903","EC:1.14.19.2","KEGG_REACTION:R03370"],"synonyms":[{"name":"acyl-[acyl-carrier-protein] desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein desaturase activity","type":"related"},{"name":"acyl-acyl-carrier-protein, hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"stearyl acyl carrier protein desaturase activity","type":"related"},{"name":"stearyl-ACP desaturase activity","type":"related"}],"termid":"GO:0045300"}


id: PBO:0061828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 18 Y-linked","termid":"PBO:0061828"}


id: PBO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog","termid":"PBO:0000055"}


id: MONDO:0001176
data:
  {"annotated_genes":["SJAG_02919","SJAG_00582","SJAG_01242","SJAG_00624","SJAG_01745","SJAG_03815","SJAG_04567","SJAG_03581","SJAG_02645","SJAG_00404","SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88671,88669,88670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013411"},{"annotations":[88684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011547"},{"annotations":[88053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013859"},{"annotations":[87170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014565"},{"annotations":[86826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014673"},{"annotations":[87725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008925"},{"annotations":[88876,88877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032735"},{"annotations":[87125,87126,87124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011413"},{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009352"}]},"cv_name":"mondo","definition":"A disease involving the lens of camera-type eye.","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00582":null,"SJAG_00624":null,"SJAG_00750":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_02645":null,"SJAG_02919":null,"SJAG_03581":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"lens disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26812","DOID:110","MEDGEN:892382","SCTID:10810001","MESH:D007905","ICD9:379.39","EFO:0009674","ICD10CM:H25-H28","UMLS:C0549651"],"synonyms":[{"name":"disease of lens of camera-type eye","type":"exact"},{"name":"disease or disorder of lens of camera-type eye","type":"exact"},{"name":"disorder of lens of camera-type eye","type":"exact"},{"name":"lens disorder","type":"exact"},{"name":"lens of camera-type eye disease","type":"exact"},{"name":"lens of camera-type eye disease or disorder","type":"exact"}],"termid":"MONDO:0001176","terms_by_termid":{"MONDO:0008925":null,"MONDO:0009352":null,"MONDO:0011413":null,"MONDO:0011547":null,"MONDO:0013411":null,"MONDO:0013859":null,"MONDO:0014565":null,"MONDO:0014673":null,"MONDO:0032735":null},"xrefs":{"Monarch":{"xref_id":"0001176"}}}


id: GO:1902874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of horizontal cell localization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16872597","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of horizontal cell localization","termid":"GO:1902872"},{"relation_name":"positively_regulates","term_name":"horizontal cell localization","termid":"GO:0035852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of horizontal cell localization","synonyms":[{"name":"activation of horizontal cell localisation","type":"narrow"},{"name":"activation of horizontal cell localization","type":"narrow"},{"name":"activation of horizontal cell positioning","type":"narrow"},{"name":"activation of laminar positioning of retinal horizontal cell","type":"narrow"},{"name":"activation of retinal horizontal cell positioning","type":"narrow"},{"name":"positive regulation of horizontal cell localisation","type":"exact"},{"name":"positive regulation of horizontal cell positioning","type":"exact"},{"name":"positive regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"positive regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up regulation of horizontal cell localisation","type":"exact"},{"name":"up regulation of horizontal cell localization","type":"exact"},{"name":"up regulation of horizontal cell positioning","type":"exact"},{"name":"up regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up regulation of retinal horizontal cell positioning","type":"exact"},{"name":"up-regulation of horizontal cell localisation","type":"exact"},{"name":"up-regulation of horizontal cell localization","type":"exact"},{"name":"up-regulation of horizontal cell positioning","type":"exact"},{"name":"up-regulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"up-regulation of retinal horizontal cell positioning","type":"exact"},{"name":"upregulation of horizontal cell localisation","type":"exact"},{"name":"upregulation of horizontal cell localization","type":"exact"},{"name":"upregulation of horizontal cell positioning","type":"exact"},{"name":"upregulation of laminar positioning of retinal horizontal cell","type":"exact"},{"name":"upregulation of retinal horizontal cell positioning","type":"exact"}],"termid":"GO:1902874"}


id: FYPO:0009010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to ultraviolet light.","direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to UV during vegetative growth","synonyms":[{"name":"resistance to ultraviolet light during vegetative growth","type":"exact"}],"termid":"FYPO:0009010"}


id: GO:0016715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced ascorbate and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.17.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}


id: MONDO:0009751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary sensory neuropathy characterized by late onset of sensory ataxia without ulcerating acropathy or autonomic abnormalities.","definition_xrefs":["DOID:0070160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary sensory, atypical","secondary_identifiers":["OMIM:256860","MESH:C564946","UMLS:C1850384","MEDGEN:376774"],"synonyms":[{"name":"atypical hereditary sensory neuropathy","type":"related"},{"name":"neuropathy, hereditary sensory, atypical","type":"exact"}],"termid":"MONDO:0009751","xrefs":{"Monarch":{"xref_id":"0009751"}}}


id: PBO:0004360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH pyrophosphatase (predicted)","termid":"PBO:0004360"}


id: MONDO:0018836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete subcorneal pustular dermatosis (obsolete MONDO:0018836)","termid":"MONDO:0018836","xrefs":{"Monarch":{"xref_id":"0018836"}}}


id: PBO:0085451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to E. coli Hsp31 and S. cerevisiae Hsp31p, Hsp33p, and Sno4p; member of the DJ-1/ThiJ/PfpI superfamily, which includes human DJ-1 involved in Parkinson's disease and cancer","termid":"PBO:0085451"}


id: GO:0045626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T-helper 1 type immune response","termid":"GO:0002826"},{"relation_name":"is_a","term_name":"negative regulation of T-helper cell differentiation","termid":"GO:0045623"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell differentiation","termid":"GO:0045625"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell differentiation","synonyms":[{"name":"down regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"down-regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"downregulation of T-helper 1 cell differentiation","type":"exact"},{"name":"inhibition of T-helper 1 cell differentiation","type":"narrow"},{"name":"negative regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045626"}


id: PBO:0050167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 23","termid":"PBO:0050167"}


id: PBO:0113094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Arabinono-1,4-lactone oxidase; catalyzes the final step in biosynthesis of dehydro-D-arabinono-1,4-lactone, which is protective against oxidative stress; null mutant shows improved incorporation efficiency of noncanonical amino acids in place of amber stop codon","termid":"PBO:0113094"}


id: MONDO:0957811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Alport syndrome","termid":"MONDO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Alport syndrome 3b, autosomal recessive","secondary_identifiers":["MEDGEN:1848447","OMIM:620536","UMLS:C5882699"],"termid":"MONDO:0957811","xrefs":{"Monarch":{"xref_id":"0957811"}}}


id: PBO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_exit_from_meiosis","termid":"PBO:0033759"}


id: GO:0047814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + ATP = D-arabinose 5-phosphate + ADP.","definition_xrefs":["EC:2.7.1.54","RHEA:24588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"D-arabinokinase activity","secondary_identifiers":["MetaCyc:D-ARABINOKINASE-RXN","KEGG_REACTION:R01573"],"synonyms":[{"name":"ATP:D-arabinose 5-phosphotransferase activity","type":"related"},{"name":"D-arabinokinase (phosphorylating)","type":"related"}],"termid":"GO:0047814"}


id: MONDO:0021178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.","definition_xrefs":["NCIT:C3671"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"injury","secondary_identifiers":["EFO:0000546","MESH:D014947"],"synonyms":[{"name":"injury","type":"exact"},{"name":"trauma","type":"exact"},{"name":"traumatic injury","type":"exact"},{"name":"wound","type":"exact"}],"termid":"MONDO:0021178","xrefs":{"Monarch":{"xref_id":"0021178"}}}


id: MOD:00474
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(1,1,2-(2)H3)-propanamide-L-cysteine.","definition_xrefs":["Unimod:97#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-carboxamidoethyl-L-cysteine","termid":"MOD:00417"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-([1,1,2-(2)H3]-carboxamidoethyl)-L-cysteine","synonyms":[{"name":"Acrylamide d3","type":"related"},{"name":"Propionamide:2H(3)","type":"related"},{"name":"S-([1,1,2-(2)H3]-3-amino-3-oxopropyl)cysteine","type":"exact"},{"name":"S-([1,1,2-(2)H3]-carbamoylethyl)-L-cysteine","type":"exact"},{"name":"S-([1,1,2-(2)H3]-propanamide)-L-cysteine","type":"exact"}],"termid":"MOD:00474"}


id: GO:1903525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane tubulation.","definition_xrefs":["PMID:18388313","GOC:TermGenie","GO_REF:0000058","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of membrane tubulation","synonyms":[{"name":"regulation of plasma membrane tubulation","type":"exact"},{"name":"regulation of vesicle scission","type":"related"}],"termid":"GO:1903525"}


id: MONDO:0018343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial periodic paralysis","termid":"MONDO:0000995"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"periodic paralysis with later-onset distal motor neuropathy","secondary_identifiers":["MEDGEN:1670241","GARD:21634","Orphanet:397750","UMLS:C4751573"],"termid":"MONDO:0018343","xrefs":{"Monarch":{"xref_id":"0018343"}}}


id: GO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + sulfite + H+ = L-cysteate + phosphate.","definition_xrefs":["RHEA:26486","PMID:19761441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"cysteate synthase activity","secondary_identifiers":["MetaCyc:RXN-11108","EC:2.5.1.76"],"termid":"GO:0044686"}


id: GO:0046590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, occurring in the embryo, by which the anatomical structures of the leg are generated and organized. A leg is a limb on which an animal walks and stands.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete embryonic leg morphogenesis (obsolete GO:0046590)","synonyms":[{"name":"embryonic leg morphogenesis","type":"exact"}],"termid":"GO:0046590"}


id: MONDO:0017618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital sucrase-isomaltase deficiency","termid":"MONDO:0009114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"congenital sucrase-isomaltase deficiency with starch intolerance","secondary_identifiers":["Orphanet:306436"],"synonyms":[{"name":"CSID with starch intolerance","type":"exact"},{"name":"congenital sucrase-isomaltose malabsorption with starch intolerance","type":"exact"},{"name":"congenital sucrose intolerance with starch intolerance","type":"exact"},{"name":"disaccharide intolerance with starch intolerance","type":"exact"}],"termid":"MONDO:0017618","xrefs":{"Monarch":{"xref_id":"0017618"}}}


id: MONDO:0015343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Secondary acute transverse myelitis (ATM) is characterized by focal inflammation within the spinal cord due to a known cause, usually an inflammatory disease.","definition_xrefs":["Orphanet:139420"],"gene_count":0,"genotype_count":0,"name":"obsolete secondary acute transverse myelitis (obsolete MONDO:0015343)","synonyms":[{"name":"disease-associated transverse myelitis","type":"exact"}],"termid":"MONDO:0015343","xrefs":{"Monarch":{"xref_id":"0015343"}}}


id: PBO:0080272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 35 pseudogene","termid":"PBO:0080272"}


id: PBO:0040047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 3","termid":"PBO:0040047"}


id: GO:0016706
data:
  {"annotated_genes":["SJAG_03286","SJAG_03041","SJAG_00221","SJAG_05265","SJAG_00642","SJAG_04580","SJAG_00892","SJAG_03997","SJAG_03635","SJAG_02401","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76323,79285],"is_not":false,"summary":null,"term":"GO:0016706"},{"annotations":[72105,89154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[68215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[76634,71802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[61230,95859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[96588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106156"},{"annotations":[75704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031543"},{"annotations":[104898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: A + 2-oxoglutarate + O2 = B + succinate + CO2. This is an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null,"SJAG_04580":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-oxoglutarate-dependent dioxygenase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-1234164","Reactome:R-HSA-6783455","EC:1.14.11.-","GO:0010302"],"synonyms":[{"name":"2-oxoglutarate dioxygenase activity","type":"exact"},{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors","type":"exact"}],"termid":"GO:0016706","terms_by_termid":{"GO:0016706":null,"GO:0031543":null,"GO:0034647":null,"GO:0051864":null,"GO:0106156":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: GO:1990737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of endoplasmic reticulum stress caused by a manganese stimulus.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:23934647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese-induced endoplasmic reticulum stress","synonyms":[{"name":"manganese-induced ER stress response","type":"exact"},{"name":"response to Mn-induced ER stress","type":"exact"},{"name":"response to manganese-induced ER stress","type":"exact"}],"termid":"GO:1990737"}


id: PBO:0005901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tyrosine, mitochondrial","termid":"PBO:0005901"}


id: PBO:0038732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 6A","termid":"PBO:0038732"}


id: SO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA polymerase II promoter element found in the promoters of genes regulated by calcineurin. The consensus sequence is GNGGCKCA.","definition_xrefs":["PMID:16928959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRE_motif","synonyms":[{"name":"CDRE motif","type":"exact"},{"name":"calcineurin-dependent response element","type":"exact"}],"termid":"SO:0001865"}


id: GO:0034542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trimethylarsine oxide + 2 H+ + 2 e- = trimethylarsine + H2O.","definition_xrefs":["UM-BBD_reactionID:r0807"],"gene_count":0,"genotype_count":0,"name":"obsolete trimethylarsine oxidase activity (obsolete GO:0034542)","termid":"GO:0034542"}


id: PBO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae COQ8","termid":"PBO:0004301"}


id: GO:0098986
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A T-shaped presynpatic density. These are common in arhropod central nervous systems.","definition_xrefs":["GOC:dos","PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic density","termid":"GO:0098980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"T-bar","termid":"GO:0098986"}


id: PR:P87319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1301 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.01c","synonyms":[{"name":"Spom972h-vps1301","type":"exact"}],"termid":"PR:P87319"}


id: MONDO:0025513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of urticaria (disease).","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune urticaria","secondary_identifiers":["SCTID:402397006","MEDGEN:725554","UMLS:C1304191","ICD9:708.8"],"synonyms":[{"name":"autoimmune urticaria","type":"exact"},{"name":"autoimmune urticaria (disease)","type":"exact"}],"termid":"MONDO:0025513","xrefs":{"Monarch":{"xref_id":"0025513"}}}


id: PBO:0088076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP9 has a paralog, UBP13, that arose from the whole genome duplication","termid":"PBO:0088076"}


id: MONDO:0000420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral folate receptor alpha deficiency (obsolete MONDO:0000420)","termid":"MONDO:0000420","xrefs":{"Monarch":{"xref_id":"0000420"}}}


id: GO:0000023
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103394,103393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose), an intermediate in the catabolism of glycogen and starch.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"malt sugar metabolic process","type":"exact"},{"name":"malt sugar metabolism","type":"exact"},{"name":"maltose metabolism","type":"exact"}],"termid":"GO:0000023","terms_by_termid":{"GO:0000025":null}}


id: GO:0032173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tubular, hourglass-shaped structure composed of highly ordered arrays of septin filaments; in budding yeast cells, the septin collar forms from the initial septin ring by expanding into the daughter cell.","definition_xrefs":["PMID:16151244","GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin collar","synonyms":[{"name":"septin hourglass","type":"exact"}],"termid":"GO:0032173"}


id: PBO:0077341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 80","termid":"PBO:0077341"}


id: PBO:0062573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 1 pseudogene","termid":"PBO:0062573"}


id: MONDO:0004648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative vascular disorder affecting the brain. It is caused by the blockage of the blood supply to the brain. It is manifested with decline of memory and cognitive functions.","definition_xrefs":["NCIT:C34525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"vascular dementia","secondary_identifiers":["ICD10CM:F01","ICD10CM:F01.5","DOID:8725","MESH:D015140","ICD9:290.4","EFO:0004718","UMLS:C0011269","MEDGEN:41447","SCTID:429998004"],"synonyms":[{"name":"multi infarct dementia","type":"narrow"},{"name":"multifocal dementia","type":"related"},{"name":"vascular dementia","type":"exact"}],"termid":"MONDO:0004648","xrefs":{"Monarch":{"xref_id":"0004648"}}}


id: PBO:0048041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSIP2 antisense RNA 2","termid":"PBO:0048041"}


id: GO:0044550
data:
  {"annotated_genes":["SJAG_00469","SJAG_04032","SJAG_04031","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107199,59554,95885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[95831],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:0044550","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: FYPO:0001959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell during nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cAMP level","termid":"FYPO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cAMP level during nitrogen starvation","synonyms":[{"name":"normal cAMP accumulation during nitrogen starvation","type":"related"},{"name":"normal cAMP level during nitrogen depletion","type":"exact"},{"name":"normal cAMP level during nitrogen deprivation","type":"exact"},{"name":"normal cellular cAMP level during nitrogen starvation","type":"exact"},{"name":"normal cyclic AMP level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001959"}


id: GO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an adenylyl group (adenosine 5'-monophosphate; AMP) to a protein amino acid.","definition_xrefs":["PMID:21607083","GOC:ai","GOC:jsg","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein adenylylation","secondary_identifiers":["GO:0018176"],"synonyms":[{"name":"protein AMPylation","type":"exact"},{"name":"protein adenylation","type":"exact"},{"name":"protein amino acid adenylylation","type":"exact"}],"termid":"GO:0018117"}


id: PBO:0004257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc9","termid":"PBO:0004257"}


id: PBO:0073464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFTPD antisense RNA 1","termid":"PBO:0073464"}


id: PBO:0080158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valosin containing protein lysine methyltransferase","termid":"PBO:0080158"}


id: PBO:0073998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5","termid":"PBO:0073998"}


id: PBO:0090422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 regulatory subunit beta isoform 2, Ckb2","termid":"PBO:0090422"}


id: PBO:0088328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit E","termid":"PBO:0088328"}


id: SO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type II (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, +80 degrees < psi +120 degrees < +180 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_right_handed_type_two","secondary_identifiers":["BS:00205"],"synonyms":[{"name":"asx turn right handed type two","type":"exact"},{"name":"asx_turn_iir","type":"exact"}],"termid":"SO:0001131"}


id: MONDO:0016289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that involves the uterine cervix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant germ cell tumor of cervix uteri","secondary_identifiers":["ICD10CM:C53.0","GARD:20501","MEDGEN:1662294","Orphanet:213837","UMLS:C4750752"],"synonyms":[{"name":"cervical germ cell cancer","type":"exact"},{"name":"cervical malignant germ cell tumor","type":"exact"},{"name":"cervical malignant germ cell tumour","type":"exact"},{"name":"germ cell cancer of cervix uteri","type":"exact"},{"name":"germ cell cancer of the cervix uteri","type":"exact"},{"name":"malignant germ cell tumor of the cervix uteri","type":"related"},{"name":"malignant germ cell tumour of the cervix uteri","type":"related"},{"name":"uterine cervix malignant germ cell tumor","type":"exact"},{"name":"uterine cervix malignant germ cell tumour","type":"exact"}],"termid":"MONDO:0016289","xrefs":{"Monarch":{"xref_id":"0016289"}}}


id: PR:Q9P7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gad8 gene.","definition_xrefs":["UniProtKB:Q9P7J8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom972h-gad8","type":"exact"}],"termid":"PR:Q9P7J8"}


id: FYPO:0007871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cortex of a cell is decreased, and some of the protein is detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PMID:34533984","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"decreased protein localisation to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell side, with protein distributed in cell cortex, during vegetative growth","type":"related"},{"name":"decreased protein localization to lateral cell cortex, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to lateral cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to lateral cell cortex, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0007871"}


id: PBO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFC related checkpoint protein Rad17","termid":"PBO:0002903"}


id: PBO:0065795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 2 pseudogene 1","termid":"PBO:0065795"}


id: GO:0033750
data:
  {"annotated_genes":["SJAG_01391","SJAG_00178","SJAG_04308","SJAG_01358","SJAG_01065","SJAG_01338","SJAG_02861","SJAG_03012","SJAG_01013","SJAG_04721","SJAG_00471","SJAG_03593","SJAG_03729","SJAG_04379","SJAG_01339","SJAG_01449","SJAG_02274","SJAG_02250","SJAG_02757","SJAG_03299","SJAG_04940","SJAG_03882","SJAG_04188","SJAG_00753","SJAG_03719","SJAG_04148","SJAG_02210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81893,78826,107553,118067,78329,119524,101423,77806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[81894,72034,77807,71543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[95764,107970,78080,113275,97908,112256,81179,60801,90779,103192,107189,93498,105739,73199,96761,116043,102200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"}]},"cv_name":"biological_process","definition":"A process in which a ribosome is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00471":null,"SJAG_00753":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02757":null,"SJAG_02861":null,"SJAG_03012":null,"SJAG_03299":null,"SJAG_03593":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03882":null,"SJAG_04148":null,"SJAG_04188":null,"SJAG_04308":null,"SJAG_04379":null,"SJAG_04721":null,"SJAG_04940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ribosome localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0033753"],"synonyms":[{"name":"establishment of ribosome localisation","type":"related"},{"name":"establishment of ribosome localization","type":"related"},{"name":"ribosome localisation","type":"related"}],"termid":"GO:0033750","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null}}


id: PBO:0069310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 566, pseudogene","termid":"PBO:0069310"}


id: FYPO:0007845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of an RNA catabolic process is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of RNA catabolic process during vegetative growth","synonyms":[{"name":"decreased rate of RNA breakdown during vegetative growth","type":"exact"},{"name":"decreased rate of RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased rate of RNA catabolism during vegetative growth","type":"exact"},{"name":"decreased rate of RNA degradation during vegetative growth","type":"exact"},{"name":"reduced rate of RNA catabolic process during vegetative growth","type":"exact"}],"termid":"FYPO:0007845"}


id: PBO:0083648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongin C, conserved among eukaryotes; forms a complex with Cul3p that polyubiquitylates monoubiquitylated RNA polymerase II to trigger its proteolysis; plays a role in global genomic repair","termid":"PBO:0083648"}


id: MONDO:0018950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-methylcrotonyl-CoA carboxylase deficiency (3-MCCD) is an inherited disorder of leucine metabolism characterized by a highly variable clinical picture ranging from metabolic crisis in infancy to asymptomatic adults.","definition_xrefs":["Orphanet:6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylcrotonyl-CoA carboxylase deficiency","secondary_identifiers":["NCIT:C98674","OMIMPS:210200","UMLS:C4551505","MEDGEN:1633312","GARD:10954","NANDO:2200495","SCTID:13144005","DOID:0050710"],"synonyms":[{"name":"3-MCC deficiency","type":"exact"},{"name":"3-methylcrotonyl-CoA carboxylase deficiency","type":"exact"},{"name":"3-methylcrotonylglycinuria","type":"exact"},{"name":"3MCC deficiency","type":"exact"},{"name":"BMCC deficiency","type":"exact"},{"name":"MCC deficiency","type":"exact"},{"name":"MCCD","type":"exact"},{"name":"Methylcrotonyl-CoA carboxylase deficiency","type":"exact"},{"name":"methylcrotonylglycinuria","type":"related"}],"termid":"MONDO:0018950","xrefs":{"Monarch":{"xref_id":"0018950"}}}


id: MONDO:0016474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder, similar to systemic lupus erythematosus, that is caused by certain drugs.","definition_xrefs":["NCIT:C114354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lupus erythematosus","termid":"MONDO:0004670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"drug-induced lupus erythematosus","secondary_identifiers":["SCTID:80258006","MedDRA:10013706","DOID:0040093","GARD:20599","UMLS:C0263591","MEDGEN:537988","icd11.foundation:1239818910","Orphanet:231111"],"synonyms":[{"name":"DIL","type":"broad"},{"name":"DILE","type":"exact"},{"name":"drug induced lupus","type":"exact"},{"name":"drug induced lupus erythematosus","type":"exact"},{"name":"drug-induced lupus","type":"exact"}],"termid":"MONDO:0016474","xrefs":{"Monarch":{"xref_id":"0016474"}}}


id: PBO:0060789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFC2-KCTD14 readthrough","termid":"PBO:0060789"}


id: GO:0052228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host protein (obsolete GO:0052228)","termid":"GO:0052228"}


id: MOD:00250
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-lysine residue to form L-lysine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-lysine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,5-diaminopentyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,5-bis(azanyl)pentyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"L-lysine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00250"}


id: MONDO:0009939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis and congenital nephrosis","secondary_identifiers":["MESH:C562895","UMLS:C0403552","MEDGEN:96044","OMIM:265600","SCTID:236530006"],"synonyms":[{"name":"pulmonic stenosis and congenital nephrosis","type":"exact"}],"termid":"MONDO:0009939","xrefs":{"Monarch":{"xref_id":"0009939"}}}


id: PBO:0042994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 7","termid":"PBO:0042994"}


id: PR:Q9HGM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- get1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGM2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein get1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.10","synonyms":[{"name":"Spom972h-get1","type":"exact"},{"name":"guided entry of tail-anchored proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGM2"}


id: GO:0042729
data:
  {"annotated_genes":["SJAG_01775","SJAG_01371","SJAG_01211","SJAG_05266","SJAG_02731","SJAG_03437","SJAG_05319","SJAG_01224","SJAG_05220","SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60962,63186,64443,64516,69772,76646,78230,81358,102305,118759],"is_not":false,"summary":null,"term":"GO:0042729"}]},"cv_name":"cellular_component","definition":"A large protein complex, containing around 8-10 subunits in yeast, including Duo1p, Dam1p, Dad1p and Ask1p. The complex forms part of the outer kinetochore, associates with microtubules when the kinetochore attaches to the spindle, and plays a role in spindle attachment, chromosome segregation and spindle stability.","definition_xrefs":["PMID:15632076","GOC:vw","GOC:jl","PMID:11782438","PMID:11799062","PMID:15640796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0000776","GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"DASH complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0043925","GO:0043926"],"synonyms":[{"name":"DDD complex","type":"exact"},{"name":"Dam1 complex","type":"exact"},{"name":"Duo1p-Dam1p-Dad1p complex","type":"exact"},{"name":"condensed nuclear chromosome kinetochore-associated DASH complex","type":"exact"}],"termid":"GO:0042729","terms_by_termid":{"GO:0042729":null}}


id: PBO:0054894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2308","termid":"PBO:0054894"}


id: PBO:0017814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter (predicted)","termid":"PBO:0017814"}


id: FYPO:0006106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at the central core of the centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin binding at centromere central core","synonyms":[{"name":"chromatin binding at centromere central core abolished","type":"exact"}],"termid":"FYPO:0006106"}


id: PBO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone Cia1","termid":"PBO:0005579"}


id: GO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"capsule polysaccharide biosynthetic process","synonyms":[{"name":"capsular polysaccharide biosynthesis","type":"exact"},{"name":"capsular polysaccharide biosynthetic process","type":"exact"},{"name":"capsule polysaccharide anabolism","type":"exact"},{"name":"capsule polysaccharide biosynthesis","type":"exact"},{"name":"capsule polysaccharide formation","type":"exact"},{"name":"capsule polysaccharide synthesis","type":"exact"}],"termid":"GO:0045227"}


id: PBO:0046063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 2","termid":"PBO:0046063"}


id: PBO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 9","termid":"PBO:0044239"}


id: MONDO:0054695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"centronuclear myopathy","termid":"MONDO:0018947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, centronuclear, 6, with fiber-type disproportion","secondary_identifiers":["DOID:0111221","UMLS:C4540345","GARD:16250","OMIM:617760","MEDGEN:1627492"],"synonyms":[{"name":"CNM6","type":"related"},{"name":"centronuclear myopathy 6 with fiber-type disproportion","type":"exact"},{"name":"myopathy, centronuclear, 6, with FIBER-type disproportion","type":"related"},{"name":"myopathy, centronuclear, 6, with fiber-type disproportion","type":"exact"}],"termid":"MONDO:0054695","xrefs":{"Monarch":{"xref_id":"0054695"}}}


id: GO:0000177
data:
  {"annotated_genes":["SJAG_04824","SJAG_04153","SJAG_01521","SJAG_04084","SJAG_01818","SJAG_00854","SJAG_03179","SJAG_04321","SJAG_04006","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73002,73297,74122,74888,76006,76271,76757,77928,79371,117717],"is_not":false,"summary":null,"term":"GO:0000177"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime processive hydrolytic exoribonuclease activity producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:17174896","PMID:20531386","PMID:26726035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exosome (RNase complex)","termid":"GO:0000178"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic exosome (ribonuclease complex)","type":"exact"},{"name":"cytoplasmic exosome multienzyme ribonuclease complex","type":"exact"},{"name":"prokaryotic exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000177","terms_by_termid":{"GO:0000177":null}}


id: MONDO:0004445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder adenocarcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a papillary pattern.","definition_xrefs":["NCIT:C39848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder papillary clear cell adenocarcinoma","secondary_identifiers":["DOID:8051","UMLS:C1511196","MEDGEN:307286"],"synonyms":[{"name":"bladder papillary clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0004445","xrefs":{"Monarch":{"xref_id":"0004445"}}}


id: PBO:0058205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4498","termid":"PBO:0058205"}


id: MONDO:0018689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive plasma cell neoplasm characterized by the presence of neoplastic plasma cells in the peripheral blood. It is characterized by the presence of a circulating clonal plasma cell count that exceeds 2x10^9/L or is 20% of the leukocyte differential count.","definition_xrefs":["NCIT:C3180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"},{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"plasma cell leukemia","secondary_identifiers":["UMLS:C0023484","ICD10CM:C90.1","EFO:0006475","ICD9:203.1","DOID:9513","icd11.foundation:2048216430","Orphanet:454714","GARD:9373","ICD9:203.10","ICDO:9733/3","SCTID:95210003","MEDGEN:9733","MESH:D007952"],"synonyms":[{"name":"PCL","type":"exact"},{"name":"leukaemia plasmacytic","type":"exact"},{"name":"leukemia plasmacytic","type":"exact"},{"name":"leukemia, plasma cell","type":"related"},{"name":"plasma cell leukemia","type":"exact"},{"name":"plasmacytic leukaemia","type":"exact"},{"name":"plasmacytic leukemia","type":"exact"}],"termid":"MONDO:0018689","xrefs":{"Monarch":{"xref_id":"0018689"}}}


id: FYPO:0000272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell fails to form a septum.","definition_xrefs":["PomBase:mah","PMID:9649519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abolished septum assembly","synonyms":[{"name":"abolished division septum assembly","type":"exact"},{"name":"abolished septation","type":"broad"},{"name":"abolished septum assembly during mitotic cell cycle","type":"related"},{"name":"abolished septum formation","type":"exact"},{"name":"septum assembly abolished","type":"exact"},{"name":"septum assembly abolished during vegetative growth","type":"exact"},{"name":"septum formation: absent","type":"related"},{"name":"septum initiation defective","type":"related"}],"termid":"FYPO:0000272"}


id: GO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle induction","termid":"GO:0072034"},{"relation_name":"is_a","term_name":"positive regulation of metanephros development","termid":"GO:0072216"},{"relation_name":"positively_regulates","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle induction","synonyms":[{"name":"positive regulation of metanephros formation","type":"broad"}],"termid":"GO:0072094"}


id: GO:0101030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a tRNA anticodon loop by replacing guanine with queuonine. Reaction is tRNA guanine + queuine = tRNA queuine + guanine.","definition_xrefs":["GOC:PomBase","GOC:vw","PMID:24911101"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA-guanine transglycosylation (obsolete GO:0101030)","termid":"GO:0101030"}


id: PBO:0031652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031652"}


id: GO:1900753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a doxorubicin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:19651502","PMID:9651400","PMID:15090538","GOC:TermGenie","PMID:12057006","PMID:19063901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"doxorubicin transport","synonyms":[{"name":"(1S,3S)-3,5,12-trihydroxy-3-(hydroxyacetyl)-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"exact"},{"name":"(1S,3S)-3-glycoloyl-3,5,12-trihydroxy-10-methoxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranoside transport","type":"related"},{"name":"(8S-cis)-10-((3-amino-2,3,6-trideoxy-alpha-L-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,8,11-trihydroxy-8-(hydroxyacetyl)-1-methoxy-5,12-naphthacenedione transport","type":"related"},{"name":"14-hydroxydaunomycin transport","type":"related"},{"name":"14-hydroxydaunorubicine transport","type":"related"},{"name":"Adriamycin transport","type":"related"},{"name":"doxorubicine transport","type":"related"},{"name":"doxorubicinum transport","type":"related"}],"termid":"GO:1900753"}


id: PBO:0057948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-4","termid":"PBO:0057948"}


id: MONDO:0971105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"neonatal renal venous thrombosis","secondary_identifiers":["MEDGEN:1863518","Orphanet:664912","UMLS:C5925061"],"termid":"MONDO:0971105","xrefs":{"Monarch":{"xref_id":"0971105"}}}


id: PBO:0065043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 2","termid":"PBO:0065043"}


id: PR:O14336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug80 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 80 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.03","synonyms":[{"name":"Spom972h-mug80","type":"exact"}],"termid":"PR:O14336"}


id: MONDO:0003276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the middle ear.","direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"},{"relation_name":"is_a","term_name":"disorder of ear","termid":"MONDO:0021205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle ear disorder","secondary_identifiers":["SCTID:68996008","NCIT:C27065","DOID:5100","ICD10CM:H65-H75","UMLS:C0271428","MEDGEN:124401"],"synonyms":[{"name":"disease of middle ear","type":"exact"},{"name":"disease or disorder of middle ear","type":"exact"},{"name":"disorder of middle ear","type":"exact"},{"name":"middle Ear disorder","type":"exact"},{"name":"middle ear disease","type":"exact"},{"name":"middle ear disease or disorder","type":"exact"}],"termid":"MONDO:0003276","xrefs":{"Monarch":{"xref_id":"0003276"}}}


id: PBO:0027656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027656"}


id: FYPO:0004138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in telomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"increased telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004138"}


id: PBO:0056470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase like","termid":"PBO:0056470"}


id: MONDO:0000105
data:
  {"annotated_genes":["SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia, nonspherocytic hemolytic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:871250","UMLS:C4025735"],"termid":"MONDO:0000105","terms_by_termid":{"MONDO:0010480":null},"xrefs":{"Monarch":{"xref_id":"0000105"}}}


id: GO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-2-lyso-sn-glycero-3-phosphoethanolamine + 1-alkyl-2-arachidonyl-sn-glycero-3-phosphocholine = 1-alkyl-2-lyso-sn-glycero-3-phosphocholine + 1-alkyl-2-arachidonyl-sn-glycero-3-phosphoethanolamine.","definition_xrefs":["MetaCyc:2.3.1.147-RXN","EC:2.3.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerophospholipid arachidonoyl-transferase (CoA-independent) activity","secondary_identifiers":["RHEA:15409"],"synonyms":[{"name":"1-organyl-2-arachidonoyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine arachidonoyltransferase (CoA-independent)","type":"related"},{"name":"1-organyl-2-arachidonyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine arachidonoyltransferase (CoA-independent)","type":"related"}],"termid":"GO:0047177"}


id: PBO:0076472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TANK antisense RNA 1","termid":"PBO:0076472"}


id: PBO:0073012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel modifier 1","termid":"PBO:0073012"}


id: PBO:0112992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adaptor protein for various signaling pathways; involved in the mating response, invasive/filamentous growth and osmotolerance; acts as an adaptor that links the G protein-associated Cdc42p-Ste20p complex to the effector Ste11p to modulate signal transduction; localizes to cortical patches at the site of shmoo initiation, facilitating polarity establishment, and remaining at the shmoo tip during mating","termid":"PBO:0112992"}


id: PBO:0028761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-post-anaphase_array_absent_from_cell","termid":"PBO:0028761"}


id: _global:encompasses
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"during_which_starts","termid":"_global:during_which_starts"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encompasses","secondary_identifiers":["RO:0002085"],"termid":"_global:encompasses"}


id: PBO:0071711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 9","termid":"PBO:0071711"}


id: MONDO:0060702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, di rocco type","secondary_identifiers":["OMIM:617974","MEDGEN:1646454","UMLS:C4693799"],"synonyms":[{"name":"SEMDDR","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Di Rocco type","type":"related"}],"termid":"MONDO:0060702","xrefs":{"Monarch":{"xref_id":"0060702"}}}


id: GO:0047295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate = 2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate + diphosphate.","definition_xrefs":["PMID:16494480","RHEA:18109","PMID:15356000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"geranylgeranylglycerol-phosphate geranylgeranyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04520","MetaCyc:2.5.1.42-RXN","EC:2.5.1.42"],"synonyms":[{"name":"(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase activity","type":"exact"},{"name":"DGGGP synthase activity","type":"exact"},{"name":"geranylgeranyl diphosphate:sn-3-O-(geranylgeranyl)glycerol 1-phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyloxyglycerol phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyltransferase II","type":"related"}],"termid":"GO:0047295"}


id: PBO:0091822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3/6 docking factor","termid":"PBO:0091822"}


id: MONDO:0004173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenocarcinoma arising from Skene gland. It presents as a periurethral or anterior vaginal submucosal mass. It is characterized by morphological features similar to prostate adenocarcinoma.","definition_xrefs":["NCIT:C39863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraurethral gland cancer","termid":"MONDO:0001869"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenocarcinoma of skene gland origin","secondary_identifiers":["UMLS:C1527427","DOID:7284","MEDGEN:282906"],"synonyms":[{"name":"Skene gland carcinoma","type":"related"},{"name":"adenocarcinoma of Skene gland","type":"exact"},{"name":"adenocarcinoma of Skene gland origin","type":"exact"},{"name":"carcinoma of Skene gland","type":"exact"},{"name":"carcinoma of Skene's gland","type":"exact"},{"name":"carcinoma of paraurethral gland","type":"exact"},{"name":"carcinoma of the paraurethral gland","type":"exact"},{"name":"paraurethral gland adenocarcinoma","type":"exact"},{"name":"paraurethral gland carcinoma","type":"exact"}],"termid":"MONDO:0004173","xrefs":{"Monarch":{"xref_id":"0004173"}}}


id: GO:0031719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 cannabinoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 2 cannabinoid receptor binding","synonyms":[{"name":"type 2 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031719"}


id: MONDO:1010453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conotruncal heart malformations that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations, non-human animal","termid":"MONDO:1010012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conotruncal heart malformations, dog","secondary_identifiers":["OMIA:000224-9615"],"termid":"MONDO:1010453","xrefs":{"Monarch":{"xref_id":"1010453"}}}


id: GO:0070834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with two N-methylations with phospho-base phosphoethanolamine and phospho-N-methylethanolamine, followed by a downstream N-methylation on phosphatidyl-base phosphatidyl-N-dimethylethanolamine; the process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-N-dimethylethanolamine","termid":"GO:0070834"}


id: GO:0070876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions downstream of the MRN complex to promote DNA repair and the G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and is composed of SOSS-B (SOSS-B1/OBFC2B or SOSS-B2/OBFC2A), SOSS-A/INTS3 and SOSS-C/C9orf80.","definition_xrefs":["PMID:19683501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SOSS complex","termid":"GO:0070876"}


id: MONDO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypersensitivity reaction type II disease that involves the endocrine system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of endocrine system","secondary_identifiers":["MEDGEN:575099","DOID:0060005","UMLS:C0342552","SCTID:237822008","ICD9:279.49"],"synonyms":[{"name":"endocrine system autoimmune disease","type":"exact"},{"name":"endocrine system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000569","xrefs":{"Monarch":{"xref_id":"0000569"}}}


id: PBO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 18","termid":"PBO:0070994"}


id: GO:0009313
data:
  {"annotated_genes":["SJAG_03824","SJAG_02949","SJAG_02131","SJAG_04301","SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103393,103394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[69549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[78493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[73161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"oligosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-8853383","GO:0051689"],"synonyms":[{"name":"multicellular organismal oligosaccharide catabolic process","type":"narrow"},{"name":"oligosaccharide breakdown","type":"exact"},{"name":"oligosaccharide catabolism","type":"exact"},{"name":"oligosaccharide degradation","type":"exact"}],"termid":"GO:0009313","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005993":null,"GO:0005995":null}}


id: MONDO:0011793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 5","secondary_identifiers":["OMIM:607202","MEDGEN:337622","UMLS:C1846631"],"synonyms":[{"name":"CELIAC5","type":"exact"},{"name":"GSES","type":"related"},{"name":"celiac disease, susceptibility to, 5","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 5","type":"related"}],"termid":"MONDO:0011793","xrefs":{"Monarch":{"xref_id":"0011793"}}}


id: PBO:0084947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional lipase/hydrolase/phospholipase; triacylglycerol lipase, steryl ester hydrolase, and Ca2+-independent phospholipase A2; catalyzes acyl-CoA dependent acylation of LPA to PA; required with Tgl3p for timely bud formation; phosphorylated and activated by Cdc28p; TGL4 has a paralog, TGL5, that arose from the whole genome duplication","termid":"PBO:0084947"}


id: GO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete specific RNA polymerase II transcription factor activity (obsolete GO:0003704)","synonyms":[{"name":"specific RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0003704"}


id: GO:0032942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,2,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["PMID:16107538","MetaCyc:RXN-7182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 2-kinase activity","synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 2-kinase activity","type":"broad"},{"name":"inositol tetrakisphosphate 2-kinase activity","type":"broad"},{"name":"inositol-tetrakisphosphate 2-kinase activity","type":"broad"}],"termid":"GO:0032942"}


id: PBO:0078830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-1","termid":"PBO:0078830"}


id: PBO:0108939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 18","termid":"PBO:0108939"}


id: GO:0007167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"enzyme-linked receptor protein signaling pathway","synonyms":[{"name":"enzyme linked receptor protein signaling pathway","type":"exact"},{"name":"enzyme linked receptor protein signalling pathway","type":"exact"}],"termid":"GO:0007167"}


id: PBO:0068168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 475","termid":"PBO:0068168"}


id: MONDO:0006674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare neoplasm, usually benign, derived from mesenchymal fibroblasts located in the submesothelial lining of the PLEURA. It spite of its various synonyms, it has no features of mesothelial cells and is not related to malignant MESOTHELIOMA or asbestos exposure.","definition_xrefs":["EFO:1000835"],"gene_count":0,"genotype_count":0,"name":"obsolete benign fibrous mesothelioma (obsolete MONDO:0006674)","secondary_identifiers":["MESH:D054363","NCIT:C4457","SCTID:254646001","DOID:2653"],"synonyms":[{"name":"fibrous mesothelioma, benign","type":"exact"},{"name":"fibrous mesothelioma, benign (morphologic abnormality)","type":"exact"},{"name":"localized benign fibrous mesothelioma","type":"exact"},{"name":"solitary fibrous tumor, pleural","type":"related"}],"termid":"MONDO:0006674","xrefs":{"Monarch":{"xref_id":"0006674"}}}


id: PBO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 92","termid":"PBO:0042040"}


id: FYPO:0002697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased methylenetetrahydrofolate reductase (NADPH) activity","synonyms":[{"name":"reduced methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"}],"termid":"FYPO:0002697"}


id: GO:0033872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphoadenylyl sulfate + alpha-D-glucosaminyl-(heparan sulfate)(n) = 3-sulfo-alpha-D-glucosaminyl-(heparan sulfate)(n) + adenosine 3',5'-bisphosphate + H+.","definition_xrefs":["EC:2.8.2.30"],"gene_count":0,"genotype_count":0,"name":"obsolete heparan sulfate 3-sulfotransferase 3 activity (obsolete GO:0033872)","synonyms":[{"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 3 activity","type":"exact"},{"name":"heparin-glucosamine 3-sulfotransferase 3 activity","type":"related"}],"termid":"GO:0033872"}


id: FYPO:0001860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal during the meiotic cell cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss","termid":"FYPO:0001859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased minichromosome loss during meiotic cell cycle","synonyms":[{"name":"increased minichromosome loss during meiosis","type":"related"},{"name":"meiotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001860"}


id: PATO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000485 mild response (obsolete PATO:0000485)","termid":"PATO:0000485"}


id: GO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progression from M phase to G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete M/G1 transition of mitotic cell cycle (obsolete GO:0000216)","synonyms":[{"name":"M/G1 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0000216"}


id: PBO:0046675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 1","termid":"PBO:0046675"}


id: MONDO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete singleton-Merten syndrome (obsolete MONDO:0000197)","termid":"MONDO:0000197","xrefs":{"Monarch":{"xref_id":"0000197"}}}


id: PBO:0051523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor accessory protein like 1","termid":"PBO:0051523"}


id: PBO:0029044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_arsenate","termid":"PBO:0029044"}


id: MONDO:0018145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"congenital retinal arteriovenous communication","secondary_identifiers":["MEDGEN:105478","UMLS:C0521570","Orphanet:353334","GARD:21530"],"synonyms":[{"name":"congenital arteriovenous anastomoses of the retina","type":"exact"},{"name":"congenital arteriovenous communication of the retina","type":"exact"},{"name":"congenital retinal arteriovenous anastomoses","type":"exact"}],"termid":"MONDO:0018145","xrefs":{"Monarch":{"xref_id":"0018145"}}}


id: PBO:0067022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 35, pseudogene","termid":"PBO:0067022"}


id: GO:0034307
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853","SJAG_00993","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93959],"is_not":false,"summary":null,"term":"GO:0034307"},{"annotations":[113030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[104085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[92497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ascospore formation. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0030437"],"is_obsolete":false,"name":"regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPKKK cascade during sporulation","type":"related"}],"termid":"GO:0034307","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0040548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2","termid":"PBO:0040548"}


id: PBO:0063738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 3","termid":"PBO:0063738"}


id: PBO:0059409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35","termid":"PBO:0059409"}


id: MOD:01954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["PubMed:21420488","PubMed:8239649","RESID:AA0181","ChEBI:17123","PubMed:22031445","PubMed:1547888","PubMed:2914619","PubMed:20805503","PubMed:10220322","PubMed:1815586","PubMed:12781460","PubMed:7947813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: GO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"negatively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis","synonyms":[{"name":"down regulation of positive chemotaxis","type":"exact"},{"name":"down-regulation of positive chemotaxis","type":"exact"},{"name":"downregulation of positive chemotaxis","type":"exact"},{"name":"inhibition of positive chemotaxis","type":"narrow"}],"termid":"GO:0050928"}


id: GO:2000108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"positively_regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte apoptotic process","synonyms":[{"name":"positive regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000108"}


id: MOD:00201
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to D-phenylalanine.","definition_xrefs":["PubMed:1548227","RESID:AA0194","PubMed:1644179","PubMed:2597281","ChEBI:29996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-phenylalanine","synonyms":[{"name":"(R)-2-amino-3-phenylpropanoic acid","type":"exact"},{"name":"D-Phe","type":"exact"},{"name":"D-phenylalanine","type":"exact"},{"name":"MOD_RES D-phenylalanine","type":"exact"}],"termid":"MOD:00201"}


id: GO:0051784
data:
  {"annotated_genes":["SJAG_02336","SJAG_01297","SJAG_04259","SJAG_02169","SJAG_01330","SJAG_03438","SJAG_04699","SJAG_04999","SJAG_01837","SJAG_03126","SJAG_03327","SJAG_00266","SJAG_03681","SJAG_03353","SJAG_02451","SJAG_01082","SJAG_04287","SJAG_04126","SJAG_04884","SJAG_00364","SJAG_01680","SJAG_00883","SJAG_01679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105688,110070,117741,115622,92492,101373,113792,109043,116110],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[116337,108125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[90831,108427,116100,117899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[108127,116340,103593,101215,117399,111730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[95972],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[115627],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[118519],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[103133],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"negatively_regulates","term_name":"nuclear division","termid":"GO:0000280"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nuclear division","type":"exact"},{"name":"down-regulation of nuclear division","type":"exact"},{"name":"downregulation of nuclear division","type":"exact"},{"name":"inhibition of nuclear division","type":"narrow"}],"termid":"GO:0051784","terms_by_termid":{"GO:0007094":null,"GO:0045128":null,"GO:0051598":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0069791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1077, pseudogene","termid":"PBO:0069791"}


id: PBO:0114834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin and fungal killer toxin kp4-like domain, cysteine-rich, possibly secreted Mug117","termid":"PBO:0114834"}


id: PBO:0071280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 3","termid":"PBO:0071280"}


id: PBO:0040517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axin 1","termid":"PBO:0040517"}


id: PBO:0054044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1385","termid":"PBO:0054044"}


id: MOD:00600
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamate 5-ethyl ester.","definition_xrefs":["PubMed:9629898","DeltaMass:0","Unimod:280#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"ethylated residue","termid":"MOD:01339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 5-ethyl ester","synonyms":[{"name":"Ethyl","type":"exact"},{"name":"Ethylation","type":"related"}],"termid":"MOD:00600"}


id: GO:0010296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein C-terminal S-farnesyl-L-cysteine methyl ester + H2O = protein C-terminal S-farnesyl-L-cysteine + methanol + H+.","definition_xrefs":["PMID:16870359","RHEA:48520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylesterase activity","termid":"GO:0051723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"prenylcysteine methylesterase activity","secondary_identifiers":["MetaCyc:RXN-8409"],"termid":"GO:0010296"}


id: PBO:0025459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial superoxide dismutase Sod2","termid":"PBO:0025459"}


id: PBO:0087206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; methylates translational release factor Mrf1p; similar to E.coli PrmC; is not an essential gene","termid":"PBO:0087206"}


id: PBO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structurte updated","termid":"PBO:0016084"}


id: MONDO:0007318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alagille (AGS) syndrome is variably characterized by chronic cholestasis due to paucity of intrahepatic bile ducts, peripheral pulmonary artery stenosis, vertebrae segmentation anomalies, characteristic facies, posterior embryotoxon/anterior segment abnormalities, pigmentary retinopathy, and dysplastic kidneys.","definition_xrefs":["Orphanet:52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005267","MONDO:0005328","MONDO:0004335"],"is_obsolete":false,"name":"Alagille syndrome","secondary_identifiers":["icd11.foundation:1249656206","NANDO:1200918","NANDO:2200931","OMIMPS:118450","MedDRA:10053870","NANDO:1200919","NCIT:C35139","DOID:9245","MEDGEN:39014","NORD:748","GARD:804","ICD9:759.89","SCTID:31742004","MESH:D016738","UMLS:C0085280"],"synonyms":[{"name":"Alagille syndrome","type":"exact"},{"name":"Alagille-Watson syndrome","type":"exact"},{"name":"Arteriohepatic dysplasia","type":"exact"},{"name":"Cardiovertebral syndrome","type":"related"},{"name":"Hepatofacioneurocardiovertebral syndrome","type":"related"},{"name":"Watson Alagille syndrome","type":"related"},{"name":"Watson-Miller syndrome","type":"related"},{"name":"hepatic ductular hypoplasia","type":"related"},{"name":"paucity of interlobular bile ducts","type":"related"},{"name":"syndromic bile duct paucity","type":"exact"}],"termid":"MONDO:0007318","xrefs":{"Monarch":{"xref_id":"0007318"}}}


id: GO:1901946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of miltiradiene.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"miltiradiene metabolic process","termid":"GO:1901944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene biosynthetic process","synonyms":[{"name":"miltiradiene anabolism","type":"exact"},{"name":"miltiradiene biosynthesis","type":"exact"},{"name":"miltiradiene formation","type":"exact"},{"name":"miltiradiene synthesis","type":"exact"}],"termid":"GO:1901946"}


id: MONDO:0015718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 12 is a rare chromosomal anomaly syndrome, with a highly variable phenotype, principally characterized by developmental or growth delay, short stature, craniofacial dysmorphism (e.g. turricephaly, tall forehead, downslanting palpebral fissures, posteriorly rotated and low set ears, narrow palate), congenital heart defects (e.g. atrial septal defect, patent ductus arteriosus), hypotonia, and pigmentary dysplasia. Scoliosis, hearing loss, facial/body asymmetry, and intellectual disability have also been reported.","definition_xrefs":["Orphanet:1698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 12 disorder","termid":"MONDO:0700019"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 12","secondary_identifiers":["SCTID:764463001","UMLS:C4706889","MEDGEN:1631133","GARD:5304"],"synonyms":[{"name":"Mosaic trisomy chromosome 12","type":"exact"},{"name":"Mosaic trisomy type 12","type":"exact"},{"name":"trisomy 12 mosaicism","type":"exact"}],"termid":"MONDO:0015718","xrefs":{"Monarch":{"xref_id":"0015718"}}}


id: PBO:0064031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 65","termid":"PBO:0064031"}


id: PBO:0068954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 198, pseudogene","termid":"PBO:0068954"}


id: GO:0042989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of actin monomers (obsolete GO:0042989)","synonyms":[{"name":"actin monomer retention","type":"exact"},{"name":"actin monomer sequestering","type":"exact"},{"name":"actin monomer sequestration","type":"exact"},{"name":"actin monomer storage","type":"exact"},{"name":"retention of actin monomers","type":"exact"},{"name":"sequestration of actin monomers","type":"exact"},{"name":"storage of actin monomers","type":"exact"}],"termid":"GO:0042989"}


id: PBO:0057515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 633","termid":"PBO:0057515"}


id: PBO:0028421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_coenzyme_Q10_level","termid":"PBO:0028421"}


id: PBO:0080617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR53 pseudogene 1","termid":"PBO:0080617"}


id: GO:0042178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xenobiotic compound, a compound foreign to the organism exposed to it, carried out by individual cells. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xenobiotic catabolic process","secondary_identifiers":["GO:0042737","GO:0042738"],"synonyms":[{"name":"drug breakdown","type":"related"},{"name":"drug catabolic process","type":"related"},{"name":"drug catabolism","type":"related"},{"name":"drug degradation","type":"related"},{"name":"exogenous drug breakdown","type":"related"},{"name":"exogenous drug catabolic process","type":"related"},{"name":"exogenous drug catabolism","type":"related"},{"name":"exogenous drug degradation","type":"related"},{"name":"xenobiotic breakdown","type":"exact"},{"name":"xenobiotic catabolism","type":"exact"},{"name":"xenobiotic degradation","type":"exact"}],"termid":"GO:0042178"}


id: GO:1902711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of GABA-A receptor activity. In human, it is usually composed of either two alpha, two beta and one gamma chain of the GABA-A receptor subunits or 5 chains of the GABA-A receptor subunits rho1-3 (formally known as GABA-C receptor).","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:18790874","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor complex","termid":"GO:1902710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GABA-A receptor complex","termid":"GO:1902711"}


id: MONDO:0014723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 17","termid":"MONDO:0016967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMP22-RAI1 contiguous gene duplication syndrome","secondary_identifiers":["UMLS:C4225255","OMIM:616652","MEDGEN:894862","Orphanet:477817","GARD:17859"],"synonyms":[{"name":"17p11.2p12 microduplication syndrome","type":"exact"},{"name":"YUAN-Harel-Lupski syndrome","type":"related"},{"name":"YUHAL","type":"exact"},{"name":"Yuan-Harel-Lupski syndrome","type":"exact"},{"name":"dup(17)(p11.2p12)","type":"exact"},{"name":"trisomy 17p11.2-p12","type":"exact"},{"name":"trisomy 17p11.2p12","type":"exact"}],"termid":"MONDO:0014723","xrefs":{"Monarch":{"xref_id":"0014723"}}}


id: PBO:0080472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 3","termid":"PBO:0080472"}


id: GO:0052092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by host","termid":"GO:0052091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by host","synonyms":[{"name":"activation by symbiont of nutrient release from host","type":"narrow"},{"name":"positive regulation by symbiont of nutrient release from host","type":"exact"},{"name":"promotion of nutrient release from host","type":"exact"},{"name":"stimulation by symbiont of nutrient release from host","type":"narrow"},{"name":"up regulation by symbiont of nutrient release from host","type":"exact"},{"name":"up-regulation by symbiont of nutrient release from host","type":"exact"},{"name":"upregulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052092"}


id: MONDO:0011494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan metabolism, defect 1N","secondary_identifiers":["MEDGEN:347614","MESH:C565742","UMLS:C1858083","OMIM:604855"],"synonyms":[{"name":"hyaluronan metabolism, defect IN","type":"related"},{"name":"hyaluronan metabolism, defect type 1N","type":"exact"}],"termid":"MONDO:0011494","xrefs":{"Monarch":{"xref_id":"0011494"}}}


id: GO:0102542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: aclacinomycin A + H2O = 15-demethoxy-aclacinomycin A + methanol + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete aclacinomycin A methylesterase activity (obsolete GO:0102542)","termid":"GO:0102542"}


id: GO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell differentiation","termid":"GO:0045601"}


id: MONDO:0020548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular pemphigoid (obsolete MONDO:0020548)","termid":"MONDO:0020548","xrefs":{"Monarch":{"xref_id":"0020548"}}}


id: GO:0015735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which uronic acid is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"uronic acid transmembrane transport","synonyms":[{"name":"uronic acid transport","type":"related"}],"termid":"GO:0015735"}


id: PBO:0084693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0084693"}


id: MOD:00782
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to N-acetyl-L-leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-leucine","synonyms":[{"name":"AcLeu","type":"exact"}],"termid":"MOD:00782"}


id: PBO:0058766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6890","termid":"PBO:0058766"}


id: PBO:0066065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor associated protein of the synapse","termid":"PBO:0066065"}


id: GO:0106354
data:
  {"annotated_genes":["SJAG_16455","SJAG_01818","SJAG_04818","SJAG_04153","SJAG_04321","SJAG_03984","SJAG_04824","SJAG_03179","SJAG_02275","SJAG_01191","SJAG_01176","SJAG_00854","SJAG_03276","SJAG_03745","SJAG_04006","SJAG_01702","SJAG_04084","SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96743,92083,117384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180037"},{"annotations":[117730,71955,117291,74126,99030,79374,90147,103882,72300,73006,109279,76760,73301,101401,108283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant tRNAs.","definition_xrefs":["PMID:32841241","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA decay","termid":"GO:0016078"},{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01702":null,"SJAG_01818":null,"SJAG_02275":null,"SJAG_03179":null,"SJAG_03276":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA surveillance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0106354","terms_by_termid":{"GO:0071038":null,"GO:0180037":null}}


id: PR:O43078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- knk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase-like fidgetin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.01","synonyms":[{"name":"Spom972h-knk1","type":"exact"},{"name":"protein sur2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43078"}


id: FYPO:0005894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"normal protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"normal protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during G1 phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005894"}


id: PBO:0109634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 14 (pseudogene)","termid":"PBO:0109634"}


id: PBO:0051048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1/OR15-1A (non-functional)","termid":"PBO:0051048"}


id: MONDO:1011680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postpartum dysgalactia syndrome, non-human animal","secondary_identifiers":["OMIA:001822"],"termid":"MONDO:1011680","xrefs":{"Monarch":{"xref_id":"1011680"}}}


id: PBO:0076559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 2B","termid":"PBO:0076559"}


id: PBO:0051871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily containing leucine rich repeat","termid":"PBO:0051871"}


id: GO:0003789
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94317],"is_not":false,"summary":null,"term":"GO:0003789"}]},"cv_name":"molecular_function","definition":"Binding to an actin subunit and promoting its dissociation from an actin filament by a local change in actin subunit conformation and orientation, and severing of filaments.","definition_xrefs":["PMID:23727096","PMID:23395798","PMID:11812157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"actin filament severing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerizing activity","type":"exact"}],"termid":"GO:0003789","terms_by_termid":{"GO:0003789":null}}


id: PR:O74378
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2-oxoglutarate dehydrogenase E1 component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.03c","secondary_identifiers":["UniProtKB:O74378"],"synonyms":[{"name":"2-oxoglutarate dehydrogenase complex component E1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OGDC-E1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC3H7.03c","type":"related"},{"name":"Spom972h-sucA","type":"exact"},{"name":"alpha-ketoglutarate dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74378"}


id: PR:Q9Y704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok14 gene.","definition_xrefs":["UniProtKB:Q9Y704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.04","synonyms":[{"name":"Spom972h-mok14","type":"exact"}],"termid":"PR:Q9Y704"}


id: GO:0050392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-vicianin + H2O = mandelonitrile + vicianose.","definition_xrefs":["RHEA:14041","EC:3.2.1.119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"vicianin beta-glucosidase activity","secondary_identifiers":["MetaCyc:VICIANIN-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R03642"],"synonyms":[{"name":"(R)-vicianin beta-D-glucohydrolase activity","type":"related"},{"name":"vicianin b-glucosidase activity","type":"exact"},{"name":"vicianin hydrolase activity","type":"related"}],"termid":"GO:0050392"}


id: GO:0051643
data:
  {"annotated_genes":["SJAG_01116","SJAG_02626","SJAG_04413","SJAG_01437","SJAG_03170","SJAG_01168","SJAG_04221","SJAG_00053","SJAG_04417","SJAG_01564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99237,62843,73544,92178,60905,62217,113495,120016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[92179,59708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[117043,108838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_04221":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"ER localization","type":"exact"},{"name":"endoplasmic reticulum localisation","type":"exact"},{"name":"establishment and maintenance of ER localization","type":"exact"}],"termid":"GO:0051643","terms_by_termid":{"GO:0051685":null,"GO:0061817":null,"GO:1990854":null}}


id: PBO:0088556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex WD repeat protein Elp1","termid":"PBO:0088556"}


id: GO:1901380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transport","termid":"GO:0043267"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of potassium ion transmembrane transport","synonyms":[{"name":"down regulation of potassium ion transmembrane transport","type":"exact"},{"name":"down-regulation of potassium ion transmembrane transport","type":"exact"},{"name":"downregulation of potassium ion transmembrane transport","type":"exact"},{"name":"inhibition of potassium ion transmembrane transport","type":"narrow"},{"name":"negative regulation of potassium ion membrane transport","type":"exact"}],"termid":"GO:1901380"}


id: PBO:0116686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 15","termid":"PBO:0116686"}


id: GO:1901418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to ethanol","termid":"GO:1901416"},{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"positively_regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to ethanol","synonyms":[{"name":"activation of response to ethanol","type":"narrow"},{"name":"up regulation of response to ethanol","type":"exact"},{"name":"up-regulation of response to ethanol","type":"exact"},{"name":"upregulation of response to ethanol","type":"exact"}],"termid":"GO:1901418"}


id: MONDO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete variable age at onset electroclinical syndrome (obsolete MONDO:0000416)","termid":"MONDO:0000416","xrefs":{"Monarch":{"xref_id":"0000416"}}}


id: GO:0141171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont effects a change that impairs the structure or function of a host membrane. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:14688136","PMID:28855258","PMID:17043230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host membrane","synonyms":[{"name":"symbiont-mediated disruption of host membrane","type":"narrow"}],"termid":"GO:0141171"}


id: PBO:0072228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 3","termid":"PBO:0072228"}


id: PBO:0034642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034642"}


id: GO:0032719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of TRAIL production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TRAIL production","termid":"GO:0032679"},{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"negatively_regulates","term_name":"TRAIL production","termid":"GO:0032639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of TRAIL production","secondary_identifiers":["GO:0045555"],"synonyms":[{"name":"down regulation of TRAIL production","type":"exact"},{"name":"down-regulation of TRAIL production","type":"exact"},{"name":"downregulation of TRAIL production","type":"exact"},{"name":"inhibition of TRAIL production","type":"narrow"},{"name":"negative regulation of TRAIL biosynthetic process","type":"narrow"}],"termid":"GO:0032719"}


id: PBO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 X-linked","termid":"PBO:0044701"}


id: MONDO:0009565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intellectual deficit, marfanoid habitus, microcephaly, and glomerulonephritis.","definition_xrefs":["Orphanet:2172"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly-glomerulonephritis-marfanoid habitus syndrome","secondary_identifiers":["OMIM:248760","UMLS:C1855348","MESH:C565411","MEDGEN:343327","GARD:3615"],"synonyms":[{"name":"MARFANOID habitus with microcephaly and glomerulonephritis","type":"related"},{"name":"microcephaly glomerulonephritis Marfanoid habitus","type":"related"}],"termid":"MONDO:0009565","xrefs":{"Monarch":{"xref_id":"0009565"}}}


id: PR:P36589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.07","synonyms":[{"name":"Spom972h-cdc14","type":"exact"}],"termid":"PR:P36589"}


id: PBO:0069545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 816, pseudogene","termid":"PBO:0069545"}


id: PBO:0084674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial arginyl-tRNA synthetase; mutations in human ortholog are associated with pontocerebellar hypoplasia type 6; MSR1 has a paralog, YDR341C, that arose from the whole genome duplication","termid":"PBO:0084674"}


id: GO:0072389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"flavin adenine dinucleotide catabolic process","synonyms":[{"name":"FAD or FADH2 catabolic process","type":"exact"},{"name":"flavin adenine dinucleotide breakdown","type":"exact"},{"name":"flavin adenine dinucleotide catabolism","type":"exact"},{"name":"flavin adenine dinucleotide degradation","type":"exact"}],"termid":"GO:0072389"}


id: GO:1905863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an invadopodium.","definition_xrefs":["GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium organization (obsolete GO:1905863)","termid":"GO:1905863"}


id: PBO:0054916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2330","termid":"PBO:0054916"}


id: GO:0032244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"positively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleoside transport","synonyms":[{"name":"activation of nucleoside transport","type":"narrow"},{"name":"stimulation of nucleoside transport","type":"narrow"},{"name":"up regulation of nucleoside transport","type":"exact"},{"name":"up-regulation of nucleoside transport","type":"exact"},{"name":"upregulation of nucleoside transport","type":"exact"}],"termid":"GO:0032244"}


id: MONDO:0006314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A soft and painless polypoid mass that arises from the mucosa in the nasal cavity. It is usually the result of an inflammatory process. It may recur following surgical resection.","definition_xrefs":["NCIT:C3256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity disorder","termid":"MONDO:0002232"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal cavity polyp","secondary_identifiers":["ICD9:471.0","ICD10CM:J33.0","SCTID:52756005","MEDGEN:6524","UMLS:C0027430","MESH:D009298","EFO:1000391","ICD9:471.9"],"synonyms":[{"name":"nasal cavity polyp","type":"exact"},{"name":"nasal polyp","type":"exact"},{"name":"polyp of nasal cavity","type":"exact"},{"name":"polyp of the nasal cavity","type":"exact"}],"termid":"MONDO:0006314","xrefs":{"Monarch":{"xref_id":"0006314"}}}


id: PBO:0057387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548bb","termid":"PBO:0057387"}


id: PBO:0041915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 3 precursor","termid":"PBO:0041915"}


id: PR:000085726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 and phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, MOD:00046.","definition_xrefs":["PMID:19362535","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me(K9),Phos(S10)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, MOD:00046","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated and phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9MePhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, MOD:00046","type":"related"},{"name":"hht1/Me(K9),Phos(S10)","type":"exact"}],"termid":"PR:000085726"}


id: MONDO:0002949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histologic variant of basal cell carcinoma of the skin characterized by the presence of strands and nests of malignant cells that are embedded in a dense fibrotic stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"morpheaform basal cell carcinoma","secondary_identifiers":["DOID:4292","NCIT:C27182","MEDGEN:107825","SCTID:403913006","UMLS:C0555191"],"synonyms":[{"name":"basal cell carcinoma sclerosing type","type":"exact"},{"name":"basal cell carcinoma, morphea","type":"exact"},{"name":"cicatricial basal-cell carcinoma","type":"exact"},{"name":"morphea-type (sclerosing) basal cell carcinoma","type":"exact"},{"name":"morphea-type basal cell carcinoma","type":"exact"},{"name":"morpheaform basal cell carcinoma","type":"exact"},{"name":"sclerosing type basal cell carcinoma","type":"exact"},{"name":"skin morphea-type (sclerosing) basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002949","xrefs":{"Monarch":{"xref_id":"0002949"}}}


id: PBO:0078025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 15","termid":"PBO:0078025"}


id: PBO:0113248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl homoserine-O-acetyl serine sulfhydrylase; involved in methionine and cysteine biosynthesis; long considered essential for inorganic sulfur assimilation, but inefficient homocysteine synthase Hsu1p enables met17 null cells to assimilate enough inorganic sulfur for survival and proliferation; growth failure of met17 null can be explained by toxic accumulation of H2S gas due to a metabolic bottleneck","termid":"PBO:0113248"}


id: MONDO:0009654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucopolysaccharidoses, unclassified types (obsolete MONDO:0009654)","secondary_identifiers":["OMIM:252700","MESH:C562442"],"synonyms":[{"name":"mucopolysaccharidoses, unclassified types","type":"exact"}],"termid":"MONDO:0009654","xrefs":{"Monarch":{"xref_id":"0009654"}}}


id: PBO:0067282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 363, pseudogene","termid":"PBO:0067282"}


id: GO:0031408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any oxylipin, any of a group of biologically active compounds formed by oxidative metabolism of polyunsaturated fatty acids.","definition_xrefs":["PMID:11960741","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxylipin metabolic process","termid":"GO:0031407"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxylipin biosynthetic process","synonyms":[{"name":"oxylipin anabolism","type":"exact"},{"name":"oxylipin biosynthesis","type":"exact"},{"name":"oxylipin formation","type":"exact"},{"name":"oxylipin synthesis","type":"exact"}],"termid":"GO:0031408"}


id: FYPO:0003710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"swollen pear-shaped vegetative cell","synonyms":[{"name":"swollen ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003710"}


id: PBO:0003568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane receptor Wsc1 (predicted)","termid":"PBO:0003568"}


id: GO:0015820
data:
  {"annotated_genes":["SJAG_03970","SJAG_03591","SJAG_05346","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89856],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[95103,93519,100663],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of L-leucine, 2-amino-4-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-leucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"leucine transport","type":"broad"}],"termid":"GO:0015820","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: PBO:0030187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_at_low_temperature","termid":"PBO:0030187"}


id: GO:1900237
data:
  {"annotated_genes":["SJAG_01113","SJAG_03346","SJAG_04813","SJAG_06638","SJAG_04009","SJAG_03309","SJAG_05153","SJAG_02066","SJAG_00256","SJAG_02472","SJAG_03067","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89619,101284,102287,103185,105161,106239,108863,110391,110625,118117,120960,120961],"is_not":false,"summary":null,"term":"GO:1900237"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of induction of conjugation with cellular fusion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"induction of conjugation with cellular fusion","termid":"GO:0010514"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_01113":null,"SJAG_02066":null,"SJAG_02472":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03346":null,"SJAG_04009":null,"SJAG_04206":null,"SJAG_04813":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"positive regulation of induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"up regulation of induction of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of induction of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of induction of conjugation with cellular fusion","type":"exact"}],"termid":"GO:1900237","terms_by_termid":{"GO:1900237":null}}


id: FYPO:0006607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex shows an abnormal pattern of localization to the complex over time.","definition_xrefs":["PomBase:mah","PMID:29514920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","synonyms":[{"name":"abnormal bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"abnormal pattern of intermittent protein localization to Cdr2 medial cortical node complex","type":"exact"},{"name":"abnormal pattern of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"abnormal protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"abnormal transient protein localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006607"}


id: PBO:0058452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5091","termid":"PBO:0058452"}


id: GO:0030240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in skeletal muscle.","definition_xrefs":["GOC:mtg_muscle","GOC:ef","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"skeletal myofibril assembly","termid":"GO:0014866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"skeletal muscle thin filament assembly","termid":"GO:0030240"}


id: MOD:00204
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to D-leucine.","definition_xrefs":["PubMed:10461743","PubMed:1358533","PubMed:1548227","RESID:AA0197","PubMed:12135762","ChEBI:30005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-leucine","synonyms":[{"name":"(2R)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"D-Leu","type":"exact"},{"name":"D-leucine","type":"exact"},{"name":"MOD_RES D-leucine","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00204"}


id: GO:0097179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains a protease inhibitor and a protease; formation of the complex inhibits protease activity.","definition_xrefs":["PMID:6323392","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor complex","termid":"GO:1904090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protease inhibitor complex","synonyms":[{"name":"peptidase inhibitor complex","type":"broad"}],"termid":"GO:0097179"}


id: GO:0009772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, Q) through a chain of electron transport molecules in the thylakoid membrane until they reach the ultimate electron acceptor of Photosystem II, which is plastocyanin (PC). The electron is then passed to the P700 chlorophyll a molecules of the reaction centre of photosystem I.","definition_xrefs":["GOC:jid","ISBN:0716731363","ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic electron transport chain","termid":"GO:0009767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic electron transport in photosystem II","termid":"GO:0009772"}


id: PBO:0056963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 23a","termid":"PBO:0056963"}


id: MONDO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration of macula and posterior pole","termid":"MONDO:0002175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cystoid macular retinal degeneration","secondary_identifiers":["DOID:14245","SCTID:14046000","MEDGEN:472900","UMLS:C0154850","ICD9:362.53"],"synonyms":[{"name":"cystoid macular degeneration of retina","type":"exact"}],"termid":"MONDO:0001919","xrefs":{"Monarch":{"xref_id":"0001919"}}}


id: PBO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF300 family protein","termid":"PBO:0000779"}


id: PBO:0041196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD13 homolog","termid":"PBO:0041196"}


id: FYPO:0008355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of AMP 5'-nucleotidase activity is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 5'-nucleotidase activity","termid":"FYPO:0008349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased AMP 5'-nucleotidase activity","termid":"FYPO:0008355"}


id: _global:similar_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar_to","termid":"_global:similar_to"}


id: PBO:0028030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_replication","termid":"PBO:0028030"}


id: PBO:0060037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 25","termid":"PBO:0060037"}


id: GO:0015867
data:
  {"annotated_genes":["SJAG_00612","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59111,104654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"}]},"cv_name":"biological_process","definition":"The directed movement of ATP, adenosine triphosphate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ATP transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015867","terms_by_termid":{"GO:1990544":null}}


id: MONDO:0010540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic disorder characterized by formation of bullae without traumatic origin, alopecia, hyperpigmentation, acrocyanosis, short stature, microcephaly, intellectual deficit, tapering fingers and nail abnormalities. Two families (one of whom was Dutch and the other Italian) have been described up to now, in which only males were affected. Transmission is X-linked recessive. The bullous dystrophy locus has been mapped to Xq26.3 in the Italian family and to Xq27.3 in the Dutch family.","definition_xrefs":["Orphanet:1867"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bullous dystrophy, macular type","secondary_identifiers":["UMLS:C0795974","OMIM:302000","MESH:C563065","MEDGEN:167089","GARD:1038"],"synonyms":[{"name":"EBM","type":"related"},{"name":"bullous dystrophy hereditary macular type","type":"related"},{"name":"bullous dystrophy, hereditary macular type","type":"related"},{"name":"epidermolysis bullosa macular type","type":"related"},{"name":"epidermolysis bullosa, macular type","type":"related"}],"termid":"MONDO:0010540","xrefs":{"Monarch":{"xref_id":"0010540"}}}


id: PBO:0076218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase upregulated non-coding 1","termid":"PBO:0076218"}


id: PBO:0078305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-10","termid":"PBO:0078305"}


id: MONDO:0014568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 73 (SPG73) is a pure form of hereditary spastic paraplegia characterized by adult onset of crural spastic paraparesis, hyperreflexia, extensor plantar responses, proximal muscle weakness, mild muscle atrophy, decreased vibration sensation at ankles, and mild urinary dysfunction. foot deformities have been reported to eventually occur in some patients. No abnormalities are noted on brain magnetic resonance imaging and peripheral nerve conduction velocity studies.","definition_xrefs":["Orphanet:444099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 73","secondary_identifiers":["DOID:0110818","OMIM:616282","MEDGEN:1800404","GARD:17763","UMLS:C5568981"],"synonyms":[{"name":"CPT1C autosomal dominant pure spastic paraplegia","type":"exact"},{"name":"SPG73","type":"exact"},{"name":"autosomal dominant pure spastic paraplegia caused by mutation in CPT1C","type":"exact"},{"name":"autosomal dominant spastic paraplegia 73","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 73","type":"exact"},{"name":"hereditary spastic paraplegia type 73","type":"exact"},{"name":"spastic paraplegia 73, autosomal dominant","type":"related"}],"termid":"MONDO:0014568","xrefs":{"Monarch":{"xref_id":"0014568"}}}


id: GO:0030649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic catabolic process","synonyms":[{"name":"aminoglycoside antibiotic breakdown","type":"exact"},{"name":"aminoglycoside antibiotic catabolism","type":"exact"},{"name":"aminoglycoside antibiotic degradation","type":"exact"}],"termid":"GO:0030649"}


id: PBO:0056255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein like","termid":"PBO:0056255"}


id: MONDO:0017752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"defect in V-ATPase","secondary_identifiers":["Orphanet:309778","MEDGEN:1842740","GARD:21345","UMLS:C5681038"],"termid":"MONDO:0017752","xrefs":{"Monarch":{"xref_id":"0017752"}}}


id: PBO:0018057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase Trm140 (predicted)","termid":"PBO:0018057"}


id: PBO:0003192
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressed by thiamine","termid":"PBO:0003192"}


id: FYPO:0000313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a germ tube with abnormal morphology (i.e. size, shape, or structure), and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","synonyms":[{"name":"inviable after spore germination, undivided cell with abnormal germ tube morphology","type":"exact"},{"name":"inviable following spore germination, without cell division with abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal germ tube morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0000313"}


id: PBO:0084559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitoribosome receptor; involved along with Dpi29p in the cotranslational insertion of nascent polypeptide chains into the inner mitochondrial membrane; associates with nascent polypeptide chains; interacts with Mdm38p and may recruit mRNA-specific translational activators to the mitoribosome; null mutant displays decreased tolerance to mistranslation-induced proteotoxic stress; localizes to the inner mitochondrial membrane","termid":"PBO:0084559"}


id: MONDO:0015539
data:
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id: PBO:0000077
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id: MONDO:0009054
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id: GO:0003045
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id: PBO:0063909
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id: PBO:0050385
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id: MONDO:0005071
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id: MONDO:0016982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the endothelial cells of the blood vessels. Microscopically, it is characterized by frequently open vascular anastomosing and branching channels. The malignant cells that line the vascular channels are spindle or epithelioid and often display hyperchromatic nuclei. Angiosarcomas most frequently occur in the skin and breast. Patients with long-standing lymphedema are at increased risk of developing angiosarcoma.","definition_xrefs":["NCIT:C3088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"angiosarcoma","secondary_identifiers":["HP:0200058","MESH:D006394","Orphanet:263413","UMLS:C0018923","DOID:0001816","MedDRA:10002476","ONCOTREE:ANGS","MEDGEN:42385","GARD:20900","SCTID:403977003","ICD9:171.9","EFO:0003968","ICDO:9120/3"],"synonyms":[{"name":"angiosarcoma","type":"exact"},{"name":"angiosarcoma (disease)","type":"exact"},{"name":"blood vessel sarcoma","type":"exact"},{"name":"hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma, malignant","type":"exact"},{"name":"malignant angioendothelioma","type":"exact"},{"name":"malignant hemangioendothelioma","type":"exact"},{"name":"sarcoma of blood vessel","type":"exact"},{"name":"vascular sarcoma","type":"exact"}],"termid":"MONDO:0016982","xrefs":{"Monarch":{"xref_id":"0016982"}}}


id: PBO:0057728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1303","termid":"PBO:0057728"}


id: PBO:0064647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPEF1 antisense RNA 1","termid":"PBO:0064647"}


id: GO:0050906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in sensory perception in which a sensory stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"},{"relation_name":"part_of","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of stimulus involved in sensory perception","secondary_identifiers":["Wikipedia:Transduction_(physiology)"],"synonyms":[{"name":"sensory detection of stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of stimulus","type":"exact"},{"name":"sensory perception, stimulus detection","type":"exact"},{"name":"sensory transduction","type":"exact"}],"termid":"GO:0050906"}


id: PBO:0036531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation release factor class II eRF3","termid":"PBO:0036531"}


id: FYPO:0003745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a greater extent than normal in the central core of the centromeric regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H3 acetylation at centromere central core during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003745"}


id: PBO:0110121
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_file_curator","termid":"PBO:0110121"}


id: PBO:0039415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenin","termid":"PBO:0039415"}


id: MONDO:0009204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal faciocardiomelic dysplasia is an extremely rare polymalformative syndrome.","definition_xrefs":["Orphanet:1972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"lethal faciocardiomelic dysplasia","secondary_identifiers":["SCTID:719400000","UMLS:C1856891","OMIM:227270","MESH:C565578","MEDGEN:384007","GARD:2229"],"synonyms":[{"name":"faciocardiomelic dysplasia lethal","type":"related"},{"name":"faciocardiomelic dysplasia, lethal","type":"related"}],"termid":"MONDO:0009204","xrefs":{"Monarch":{"xref_id":"0009204"}}}


id: PBO:0049705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0049705"}


id: MONDO:0010916
data:
  {"annotated_genes":["SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87197],"is_not":false,"summary":null,"term":"MONDO:0010916"}]},"cv_name":"mondo","definition":"Any autosomal dominant polycystic kidney disease in which the cause of the disease is a mutation in the GANAB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"polycystic kidney disease 3 with or without polycystic liver disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3887964","GARD:18598","MEDGEN:854672","DOID:0110860","OMIM:600666"],"synonyms":[{"name":"APKD3","type":"exact"},{"name":"Apkd3","type":"exact"},{"name":"GANAB autosomal dominant polycystic kidney disease","type":"exact"},{"name":"PKD3","type":"exact"},{"name":"Pkd3","type":"exact"},{"name":"autosomal dominant polycystic kidney disease caused by mutation in GANAB","type":"exact"},{"name":"polycystic kidney disease 3","type":"exact"},{"name":"polycystic kidney disease 3 with or without polycystic liver disease","type":"exact"},{"name":"polycystic kidney disease 3, autosomal dominant","type":"exact"},{"name":"polycystic kidney disease type 3","type":"exact"},{"name":"polycystic kidney disease, adult, type 3","type":"exact"},{"name":"polycystic kidney disease, adult, type III","type":"exact"},{"name":"polycystic kidney disease, type 3","type":"exact"}],"termid":"MONDO:0010916","terms_by_termid":{"MONDO:0010916":null},"xrefs":{"Monarch":{"xref_id":"0010916"}}}


id: PBO:0074408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM11 pseudogene 2","termid":"PBO:0074408"}


id: PBO:0083920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1; major enzyme of polyprenol synthesis in both the endoplasmic reticulum (ER) and in lipid droplets; participates in ER protein sorting; human ortholog DHDDS functionally complements the heat sensitive growth defect of a ts allele, and is associated with retinitis pigmentosa","termid":"PBO:0083920"}


id: MONDO:0044781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome, occurring in the pediatric population, characterized by the normalization of proteinuria with the administration of corticosteroids.","definition_xrefs":["NCIT:C122797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid-resistant nephrotic syndrome","termid":"MONDO:0044765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome of childhood - steroid sensitive","secondary_identifiers":["UMLS:C0403396","SCTID:236380004","MEDGEN:588368"],"synonyms":[{"name":"nephrotic syndrome of childhood - steroid sensitive","type":"exact"},{"name":"steroid-responsive nephrotic syndrome","type":"exact"},{"name":"steroid-sensitive nephrotic syndrome","type":"exact"}],"termid":"MONDO:0044781","xrefs":{"Monarch":{"xref_id":"0044781"}}}


id: MOD:00019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-isoleucine.","definition_xrefs":["RESID:AA0010","DeltaMass:0","ChEBI:30009","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine residue","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"Ile","type":"exact"},{"name":"Isoleucyl","type":"exact"},{"name":"L-erythro-isoleucine","type":"exact"},{"name":"L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00019"}


id: GO:0017151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DEAD/H-box RNA helicase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"DEAD/H-box RNA helicase binding","termid":"GO:0017151"}


id: GO:0015025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI-anchored membrane-bound receptor (obsolete GO:0015025)","synonyms":[{"name":"GPI-anchored membrane-bound receptor","type":"exact"}],"termid":"GO:0015025"}


id: MONDO:0016652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"2q31.1 microdeletion syndrome is a well-defined and clinically recognizable syndrome characterized by moderate to severe developmental delay, short stature, facial dysmorphism and variable limb defects.","definition_xrefs":["Orphanet:251014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q31.1 microdeletion syndrome","secondary_identifiers":["UMLS:C4274647","MEDGEN:899856","GARD:20690","SCTID:716387004"],"synonyms":[{"name":"Del(2)(q31.1)","type":"exact"},{"name":"monosomy 2q31.1","type":"exact"}],"termid":"MONDO:0016652","xrefs":{"Monarch":{"xref_id":"0016652"}}}


id: GO:0044775
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcomplex of the DNA polymerase III holoenzyme which is responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication. The complex is homodimeric in prokaryotes, and homotrimeric in other species.","definition_xrefs":["GOC:jl","UniProt:O73947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase processivity factor complex","termid":"GO:0044796"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III, beta sliding clamp processivity factor complex","termid":"GO:0044775"}


id: MONDO:0009377
data:
  {"annotated_genes":["SJAG_00636","SJAG_00695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86772,86773],"is_not":false,"summary":null,"term":"MONDO:0009377"}]},"cv_name":"mondo","definition":"N-acetylglutamate synthase (NAGS) deficiency is a urea cycle disorder leading to hyperammonaemia.","definition_xrefs":["Orphanet:927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00636":null,"SJAG_00695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperammonemia due to N-acetylglutamate synthase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7158","MESH:C536109","NCIT:C129307","NANDO:2201084","UMLS:C0268543","DOID:0112258","MEDGEN:120649","NANDO:1200808","NANDO:2200477","SCTID:57119000","OMIM:237310"],"synonyms":[{"name":"N-acetyl glutamate synthetase deficiency","type":"related"},{"name":"N-acetylglutamate synthase deficiency","type":"related"},{"name":"N-acetylglutamate synthetase deficiency","type":"related"},{"name":"NAG synthetase deficiency","type":"related"},{"name":"NAGS deficiency","type":"exact"},{"name":"NAGSD","type":"related"},{"name":"Nags deficiency","type":"related"},{"name":"hyperammonemia due to N-acetylglutamate synthase deficiency","type":"exact"},{"name":"hyperammonemia due to N-acetylglutamate synthetase deficiency","type":"related"}],"termid":"MONDO:0009377","terms_by_termid":{"MONDO:0009377":null},"xrefs":{"Monarch":{"xref_id":"0009377"}}}


id: PBO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin family actin-like protein Arp1","termid":"PBO:0033831"}


id: MONDO:0022770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circumscribed cutaneous aplasia of the vertex","termid":"MONDO:0022770","xrefs":{"Monarch":{"xref_id":"0022770"}}}


id: MONDO:0017968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"46,XY ovotesticular disorder of sex development is a rare, genetic disorder of sex development characterized by either the coexistence of both male and female reproductive gonads or, more frequently, by the presence of one or both gonads containing a mixture of both testicular and ovarian tissue (ovotestes) in an individual with a normal male 46, XY karyotype. External genitalia are usually ambiguous, but can range from normal male to normal female and if a uterus and/or fallopian tubes are present, they are generally hypoplastic. Cryptorchidism, hypospadias, infertility and increased risk of gonadal tumors are frequently associated.","definition_xrefs":["Orphanet:325345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XY ovotesticular disorder of sex development","secondary_identifiers":["SCTID:763683004","MEDGEN:394582","UMLS:C2697358","GARD:21469"],"synonyms":[{"name":"46,XY ovotesticular DSD","type":"exact"}],"termid":"MONDO:0017968","xrefs":{"Monarch":{"xref_id":"0017968"}}}


id: PR:O74915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C757.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.04","synonyms":[{"name":"Spom972h-SPCC757.04","type":"exact"}],"termid":"PR:O74915"}


id: GO:0036307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(2030) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N(6)-methyladenine(2030) in 23S rRNA.","definition_xrefs":["GOC:imk","PMID:22847818","RHEA:43736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6-)-methyltransferase activity","termid":"GO:0008988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"23S rRNA (adenine(2030)-N(6))-methyltransferase activity","secondary_identifiers":["EC:2.1.1.266"],"termid":"GO:0036307"}


id: GO:1900309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of maltoheptaose metabolic process","synonyms":[{"name":"regulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900309"}


id: GO:0032848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a process that reduces the internal pH of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular pH reduction","termid":"GO:0032847"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"intracellular pH reduction","termid":"GO:0051452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular pH reduction","synonyms":[{"name":"down regulation of cellular pH reduction","type":"exact"},{"name":"down-regulation of cellular pH reduction","type":"exact"},{"name":"downregulation of cellular pH reduction","type":"exact"},{"name":"inhibition of cellular pH reduction","type":"narrow"},{"name":"negative regulation of cell pH reduction","type":"exact"},{"name":"negative regulation of cellular acidification","type":"exact"},{"name":"negative regulation of intracellular acidification","type":"related"},{"name":"negative regulation of intracellular pH reduction","type":"exact"},{"name":"negative regulation of reduction of cellular pH","type":"exact"},{"name":"negative regulation of reduction of pH in cell","type":"exact"}],"termid":"GO:0032848"}


id: GO:0052218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052218)","synonyms":[{"name":"positive energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052218"}


id: PBO:0065965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 associated protein 1","termid":"PBO:0065965"}


id: PR:O74907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA2 and CDKN1A-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04180","PANTHER:PTHR13261:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.08","secondary_identifiers":["UniProtKB:O74907"],"synonyms":[{"name":"Spom972h-BCCIP","type":"exact"}],"termid":"PR:O74907"}


id: MOD:00406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Applied Biosystems original isotope-coded affinity tag d0 reagent.","definition_xrefs":["Unimod:13#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Applied Biosystems original ICAT(TM) d0 modified cysteine","synonyms":[{"name":"Applied Biosystems original ICAT(TM) d0","type":"related"},{"name":"ICAT-D","type":"related"}],"termid":"MOD:00406"}


id: MOD:00617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 3x(2)H labeled residue methyl ester.","definition_xrefs":["Unimod:298","OMSSA:21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H residue methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"ctermpeptrideuteromethyl","type":"exact"},{"name":"deuterated methyl ester","type":"related"}],"termid":"MOD:00617"}


id: GO:0046273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["GOC:jl","PMID:10074466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lignan catabolic process","synonyms":[{"name":"lignan breakdown","type":"exact"},{"name":"lignan catabolism","type":"exact"},{"name":"lignan degradation","type":"exact"}],"termid":"GO:0046273"}


id: MONDO:0009632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia with hyperopia, retinal degeneration, macrophakia, and dental anomalies","secondary_identifiers":["MEDGEN:368490","OMIM:251700","MESH:C566884","UMLS:C1968637"],"synonyms":[{"name":"microphthalmia with hyperopia, retinal degeneration, macrophakia, and dental anomalies","type":"exact"}],"termid":"MONDO:0009632","xrefs":{"Monarch":{"xref_id":"0009632"}}}


id: PBO:0029863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_morphology_during_mitosis","termid":"PBO:0029863"}


id: PBO:0057438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 555","termid":"PBO:0057438"}


id: PBO:0049220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK3 antisense RNA 1","termid":"PBO:0049220"}


id: GO:0046637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell differentiation","synonyms":[{"name":"regulation of alpha-beta T cell development","type":"related"},{"name":"regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046637"}


id: PBO:0030900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_stress_during_vegetative_growth","termid":"PBO:0030900"}


id: GO:0007266
data:
  {"annotated_genes":["SJAG_03361","SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77007],"is_not":false,"summary":null,"term":"GO:0007266"},{"annotations":[73225],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rho subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03361":null,"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Rho mediated signal transduction","type":"exact"}],"termid":"GO:0007266","terms_by_termid":{"GO:0007266":null,"GO:0035024":null}}


id: MONDO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the coronary artery lumen diameter.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary stenosis","secondary_identifiers":["NANDO:2200246","SCTID:233970002","MEDGEN:66859","UMLS:C0242231","MESH:D023921","MedDRA:10011089","DOID:4248"],"synonyms":[{"name":"coronary artery stenosis","type":"exact"}],"termid":"MONDO:0006715","xrefs":{"Monarch":{"xref_id":"0006715"}}}


id: PBO:0071254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 95","termid":"PBO:0071254"}


id: PBO:0078890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 3-1","termid":"PBO:0078890"}


id: MONDO:0011312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid carcinoma, nonmedullary, with or without cell oxyphilia","secondary_identifiers":["UMLS:C1863925","MEDGEN:400409","GARD:15354","MESH:C537842","OMIM:603386"],"synonyms":[{"name":"TCO","type":"related"},{"name":"TCO 1","type":"related"},{"name":"TCO1","type":"related"},{"name":"nonmedullary thyroid carcinoma, with or without cell oxyphilia","type":"related"},{"name":"thyroid carcinoma, nonmedullary, with cell oxyphilia","type":"exact"},{"name":"thyroid carcinoma, nonmedullary, with or without cell oxyphilia","type":"exact"}],"termid":"MONDO:0011312","xrefs":{"Monarch":{"xref_id":"0011312"}}}


id: PBO:0050055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, V (pseudogene)","termid":"PBO:0050055"}


id: PBO:0112606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-22 sterol desaturase (cytochrome P450) Erg5","termid":"PBO:0112606"}


id: SO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of intronic sequence of the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"},{"relation_name":"is_a","term_name":"coding_transcript_intron_variant","termid":"SO:0001969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_intron_variant","synonyms":[{"name":"3 prime UTR intron variant","type":"exact"}],"termid":"SO:0002090"}


id: MONDO:0004790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A reversible condition wherein large vacuoles of triglyceride fat accumulate in liver cells via the process of steatosis.","definition_xrefs":["Wikipedia:Fatty_liver"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"fatty liver disease","secondary_identifiers":["SCTID:371330000","MESH:D005234","MEDGEN:398225","DOID:9452","SCTID:197321007","ICD9:571.8","UMLS:C2711227","ICD9:571.0"],"synonyms":[{"name":"fatty change of liver","type":"exact"},{"name":"fatty liver","type":"exact"},{"name":"hepatic lipidosis","type":"exact"},{"name":"steatosis of liver","type":"exact"}],"termid":"MONDO:0004790","xrefs":{"Monarch":{"xref_id":"0004790"}}}


id: GO:0043268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transport","termid":"GO:0043266"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"potassium ion transport","termid":"GO:0006813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of potassium ion transport","synonyms":[{"name":"activation of potassium ion transport","type":"narrow"},{"name":"positive regulation of K+ conductance","type":"narrow"},{"name":"positive regulation of K+ transport","type":"exact"},{"name":"positive regulation of potassium conductance","type":"narrow"},{"name":"positive regulation of potassium ion conductance","type":"narrow"},{"name":"positive regulation of potassium transport","type":"exact"},{"name":"stimulation of potassium ion transport","type":"narrow"},{"name":"up regulation of potassium ion transport","type":"exact"},{"name":"up-regulation of potassium ion transport","type":"exact"},{"name":"upregulation of potassium ion transport","type":"exact"}],"termid":"GO:0043268"}


id: PBO:0062524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily S member 21 pseudogene","termid":"PBO:0062524"}


id: MONDO:0013675
data:
  {"annotated_genes":["SJAG_01147"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87406],"is_not":false,"summary":null,"term":"MONDO:0013675"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the BOLA3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01147":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080134","GARD:17662","MEDGEN:482008","OMIM:614299","Orphanet:401874","UMLS:C3280378"],"synonyms":[{"name":"BOLA3 deficiency","type":"exact"},{"name":"BOLA3 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"MMDS2","type":"related"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in BOLA3","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 2","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 2 with hyperglycinemia","type":"related"},{"name":"multiple mitochondrial dysfunctions syndrome type 2","type":"exact"}],"termid":"MONDO:0013675","terms_by_termid":{"MONDO:0013675":null},"xrefs":{"Monarch":{"xref_id":"0013675"}}}


id: PBO:0039434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANK3 divergent transcript","termid":"PBO:0039434"}


id: MONDO:0100318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A viral disease or post-viral disorder caused by infection with severe acute respiratory syndrome coronavirus 2 or the associated aftereffects of the disease.","gene_count":0,"genotype_count":0,"name":"obsolete SARS-CoV-2-related disease (obsolete MONDO:0100318)","synonyms":[{"name":"COVID-19-related disease","type":"broad"}],"termid":"MONDO:0100318","xrefs":{"Monarch":{"xref_id":"0100318"}}}


