# terms

id: PBO:0003869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporting ATPase Ccc2 (predicted)","termid":"PBO:0003869"}


id: PR:O13724
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein ZPR1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10876:SF0","OMA:SCHPO01538","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zpr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.04c","secondary_identifiers":["UniProtKB:O13724"],"synonyms":[{"name":"Spom972h-ZNF259","type":"exact"}],"termid":"PR:O13724"}


id: GO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-3-D-galactosyl-sn-2-acylglycerol + acyl-[acyl-carrier protein] = D-galactosyldiacylglycerol + [acyl-carrier protein].","definition_xrefs":["EC:2.3.1.141","MetaCyc:2.3.1.141-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"galactosylacylglycerol O-acyltransferase activity","secondary_identifiers":["RHEA:17057"],"synonyms":[{"name":"acyl-ACP:lyso-MGDG acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier protein: lysomonogalactosyldiacylglycerol acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:D-galactosylacylglycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0047175"}


id: PBO:0016071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mPR1","termid":"PBO:0016071"}


id: PBO:0027596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_multiseptate_vegetative_cell","termid":"PBO:0027596"}


id: PBO:0082462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcineurin A; one isoform (the other is Cna1p) of the catalytic subunit of calcineurin, a Ca++/calmodulin-regulated protein phosphatase which regulates Crz1p (a stress-response transcription factor), the other calcineurin subunit is CNB1; regulates the function of Aly1p alpha-arrestin; CMP2 has a paralog, CNA1, that arose from the whole genome duplication","termid":"PBO:0082462"}


id: PBO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C9","termid":"PBO:0045220"}


id: GO:1990023
data:
  {"annotated_genes":["SJAG_00082","SJAG_04841","SJAG_02336","SJAG_04745","SJAG_01805","SJAG_04140","SJAG_01837","SJAG_00697","SJAG_00930","SJAG_03073","SJAG_02045","SJAG_01429","SJAG_04412","SJAG_01371","SJAG_03048","SJAG_00723","SJAG_01297","SJAG_02266","SJAG_02542"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77933,78855,80526,91393,91760,92747,93150,95565,96546,102323,102838,104147,105335,110065,113019,113723,118507,119419,120556],"is_not":false,"summary":null,"term":"GO:1990023"}]},"cv_name":"cellular_component","definition":"The area in the center of the anaphase spindle consisting of microtubules, microtubule bundling factors and kinesin motors where the spindle microtubules from opposite poles overlap in an antiparallel manner.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone","termid":"GO:0051233"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00697":null,"SJAG_00723":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01429":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02266":null,"SJAG_02336":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0072686","GO:0015630"],"is_obsolete":false,"name":"mitotic spindle midzone","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990023","terms_by_termid":{"GO:1990023":null}}


id: PBO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1 (predicted)","termid":"PBO:0001984"}


id: PBO:0074127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 10","termid":"PBO:0074127"}


id: GO:0030995
data:
  {"annotated_genes":["SJAG_03444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[121002],"is_not":false,"summary":null,"term":"GO:0030995"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the dissolution of the septum edging during cell separation.","definition_xrefs":["PMID:15194814","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"part_of","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell septum edging catabolic process","references_by_uniquename":{"PMID:24699070":null},"synonyms":[{"name":"cell septum edging hydrolysis","type":"exact"},{"name":"hydrolysis of cell septum edging","type":"exact"},{"name":"hydrolysis of edging of cell septum","type":"exact"},{"name":"septum edging hydrolysis","type":"broad"}],"termid":"GO:0030995","terms_by_termid":{"GO:0030995":null}}


id: PBO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex GTPase subunit Hbs1","termid":"PBO:0089706"}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: PBO:0060612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurochondrin","termid":"PBO:0060612"}


id: GO:0097618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dinoflagellate sulcus that extends all the way to the posterior end of the cell (also known as antapex). The presence of a sulcal notch makes the dinoflagellate hypocone appear bilobed.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","PMID:7002229","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate sulcus","termid":"GO:0097612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"dinoflagellate sulcal notch","synonyms":[{"name":"dinoflagellate sulcus notch","type":"exact"},{"name":"sulcal notch","type":"related"}],"termid":"GO:0097618"}


id: MONDO:0005459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic disorder caused by protozoa of the Trypanosoma brucei species. It is transmitted by flies and is endemic in various regions of Sub-Saharan Africa. Signs and symptoms include fever, joint pain, headache, and significant swelling of the lymph nodes. If left untreated, the parasitic infection causes anemia, heart, kidney, and endocrine failure, and neurologic damage. Subsequently patients develop confusion, disruption of the sleep cycle, and mental deterioration. The infection may lead to coma and death.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanosomiasis","termid":"MONDO:0000940"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human African trypanosomiasis","secondary_identifiers":["NCIT:C84541","Orphanet:3385","MESH:D014353","SCTID:27031003","MedDRA:10001461","UMLS:C0041228","MEDGEN:21714","DOID:10112","GARD:7826","ICD9:086.5","MONDO:0018073","EFO:0005225"],"synonyms":[{"name":"Africam sleeping sickness","type":"exact"},{"name":"African sleeping sickness","type":"exact"},{"name":"African trypanosomiasis","type":"exact"},{"name":"sleeping sickness","type":"exact"}],"termid":"MONDO:0005459","xrefs":{"Monarch":{"xref_id":"0005459"}}}


id: PBO:0041506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 28","termid":"PBO:0041506"}


id: MONDO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"midface dysplasia","secondary_identifiers":["DOID:0050767"],"termid":"MONDO:0000446","xrefs":{"Monarch":{"xref_id":"0000446"}}}


id: MONDO:0010813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic beta cell agenesis with neonatal diabetes mellitus","secondary_identifiers":["Orphanet:28455","OMIM:600089","MESH:C538111","UMLS:C1838655","MEDGEN:325072"],"synonyms":[{"name":"diabetes mellitus, insulin-dependent, neonatal","type":"exact"},{"name":"pancreatic beta cell agenesis with neonatal diabetes mellitus","type":"exact"}],"termid":"MONDO:0010813","xrefs":{"Monarch":{"xref_id":"0010813"}}}


id: MONDO:0009998
data:
  {"annotated_genes":["SJAG_02879"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86943],"is_not":false,"summary":null,"term":"MONDO:0009998"}]},"cv_name":"mondo","definition":"Richieri Costa-Pereira syndrome is characterized by short stature, Robin sequence, cleft mandible, pre/postaxial hand anomalies (including hypoplastic thumbs), and clubfoot. It has been described in 14 Brazilian families and in one unrelated French patient. Prominent low set ears and a highly arched palate were also observed. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:3102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02879":null},"genotype_count":0,"is_obsolete":false,"name":"Richieri Costa-Pereira syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1849348","MESH:C535677","MEDGEN:336581","OMIM:268305","icd11.foundation:107084177","GARD:4718","SCTID:723998001"],"synonyms":[{"name":"ROBIN sequence with cleft mandible and limb anomalies","type":"related"},{"name":"Richieri Costa Pereira syndrome","type":"related"},{"name":"Richieri Costa-Pereira syndrome","type":"exact"},{"name":"Richieri-Costa and Pereira form of acrofacial dysostosis","type":"related"},{"name":"Richieri-Costa-Pereira syndrome","type":"related"},{"name":"short stature, Robin sequence, cleft mandible, pre/postaxial hand anomalies, and clubfoot","type":"related"},{"name":"short stature-Pierre Robin sequence-cleft mandible-hand anomalies clubfoot syndrome","type":"exact"},{"name":"short stature-Pierre Robin syndrome-cleft mandible-hand anomalies clubfoot syndrome","type":"exact"}],"termid":"MONDO:0009998","terms_by_termid":{"MONDO:0009998":null},"xrefs":{"Monarch":{"xref_id":"0009998"}}}


id: MONDO:0008243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurodegenerative disorder leading to dementia. It is characterized by frontotemporal lobar degeneration with accumulation of tau proteins which form Pick bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontotemporal dementia","termid":"MONDO:0017276"},{"relation_name":"is_a","term_name":"cerebral degeneration","termid":"MONDO:0024238"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Pick disease","secondary_identifiers":["OMIM:172700","ICD9:331.11","ICD10CM:G31.01","UMLS:C0236642","MEDGEN:116020","DOID:11870","EFO:0003096","MESH:D020774","NCIT:C85008","SCTID:13092008"],"synonyms":[{"name":"PICK disease of brain","type":"exact"},{"name":"Pick disease","type":"exact"},{"name":"Pick disease of the brain","type":"related"},{"name":"Pick's disease","type":"related"},{"name":"dementia in Pick's disease","type":"exact"},{"name":"dementia with lobar atrophy and neuronal cytoplasmic inclusions","type":"related"},{"name":"lobar atrophy of brain","type":"exact"},{"name":"lobar atrophy of the brain","type":"related"}],"termid":"MONDO:0008243","xrefs":{"Monarch":{"xref_id":"0008243"}}}


id: SO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Edited mRNA sequence mediated by two or more overlapping guide RNAs (SO:0000602).","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"editing_domain","synonyms":[{"name":"editing domain","type":"exact"}],"termid":"SO:0000606"}


id: PBO:0079762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-fold modifier conjugating enzyme 1","termid":"PBO:0079762"}


id: MONDO:0004765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is triggered by factors not related to allergies such as anxiety, stress, exercise, cold air, dry air, hyperventilation, smoke, viruses, chemical irritants, autonomic imbalance, hormonal deficiencies and psychogenic influences. It is characterized by airway obstruction and inflammation that is at least partially reversible with medication. The symptoms include coughing, wheezing, shortness of breath or rapid breathing, and chest tightness.","definition_xrefs":["DOID:9360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrinsic asthma","secondary_identifiers":["UMLS:C0155880","MEDGEN:510123","SCTID:266361008","ICD9:493.1"],"synonyms":[{"name":"non-allergic asthma","type":"exact"}],"termid":"MONDO:0004765","xrefs":{"Monarch":{"xref_id":"0004765"}}}


id: MONDO:0043459
data:
  {"annotated_genes":["SJAG_00995","SJAG_01207","SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[87029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder which results from exposure to radiation. Examples of non-neoplastic disorders include dermatitis, enteritis, stomatitis, pneumonitis, and cerebritis. Examples of neoplastic disorders include myelodysplastic syndromes, leukemias, and sarcomas.","definition_xrefs":["NCIT:C26684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null},"genotype_count":0,"is_obsolete":false,"name":"radiation-induced disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009565","GARD:22139","UMLS:C1527225","MESH:D000016","Orphanet:521132","SCTID:85983004","MEDGEN:734320"],"synonyms":[{"name":"Abnormality, radiation-induced","type":"related"},{"name":"abnormalities, radiation induced","type":"related"},{"name":"radiation induced abnormalities","type":"related"},{"name":"radiation-induced Abnormality","type":"exact"},{"name":"radiation-induced abnormalities","type":"exact"},{"name":"radiation-induced disorder","type":"exact"}],"termid":"MONDO:0043459","terms_by_termid":{"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null},"xrefs":{"Monarch":{"xref_id":"0043459"}}}


id: FYECO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose MM","synonyms":[{"name":"sucrose minimal medium","type":"exact"}],"termid":"FYECO:0000147"}


id: PR:O74999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.02","synonyms":[{"name":"RAD7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp7","type":"exact"}],"termid":"PR:O74999"}


id: MONDO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis of all four limbs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadriplegia","secondary_identifiers":["MESH:D011782","MEDGEN:19617","NCIT:C50721","UMLS:C0034372","DOID:12835","ICD9:344.09","SCTID:11538006","EFO:0009684","ICD9:344.00","ICD10CM:G82.5"],"synonyms":[{"name":"bilateral diplegia","type":"exact"},{"name":"tetraplegia","type":"exact"}],"termid":"MONDO:0001590","xrefs":{"Monarch":{"xref_id":"0001590"}}}


id: PBO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHD4 antisense RNA 1","termid":"PBO:0045979"}


id: PBO:0052464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 11","termid":"PBO:0052464"}


id: GO:0045590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of differentiation of regulatory T cells.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"regulation of regulatory T cell differentiation","termid":"GO:0045589"},{"relation_name":"negatively_regulates","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of regulatory T cell differentiation","synonyms":[{"name":"down regulation of regulatory T cell differentiation","type":"exact"},{"name":"down-regulation of regulatory T cell differentiation","type":"exact"},{"name":"downregulation of regulatory T cell differentiation","type":"exact"},{"name":"inhibition of regulatory T cell differentiation","type":"narrow"},{"name":"negative regulation of regulatory T cell development","type":"related"},{"name":"negative regulation of regulatory T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of regulatory T-cell differentiation","type":"exact"},{"name":"negative regulation of regulatory T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of suppressor T cell differentiation","type":"exact"},{"name":"negative regulation of suppressor T-cell differentiation","type":"exact"}],"termid":"GO:0045590"}


id: MONDO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sammartino-Decreccio syndrome","secondary_identifiers":["UMLS:C2931447","MEDGEN:419806"],"synonyms":[{"name":"Sammartino Decreccio syndrome","type":"related"},{"name":"superficial annular corneal dystrophy, ichthyosis nigrans, microcephaly and mild mental subnormality","type":"related"}],"termid":"MONDO:0042600","xrefs":{"Monarch":{"xref_id":"0042600"}}}


id: GO:0043728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + L-glutamine = 2-oxoglutaramate + L-methionine.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-keto-4-methylthiobutyrate aminotransferase activity (obsolete GO:0043728)","termid":"GO:0043728"}


id: MONDO:0021243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the parotid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parotid disorder","termid":"MONDO:0005899"},{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parotid gland neoplasm","secondary_identifiers":["NCIT:C3314","SCTID:126788000","UMLS:C0030581","MEDGEN:18313","EFO:0003873"],"synonyms":[{"name":"neoplasm of parotid","type":"exact"},{"name":"neoplasm of parotid gland","type":"exact"},{"name":"neoplasm of the parotid","type":"exact"},{"name":"neoplasm of the parotid gland","type":"exact"},{"name":"parotid gland neoplasm (disease)","type":"exact"},{"name":"parotid gland tumor","type":"exact"},{"name":"parotid gland tumour","type":"exact"},{"name":"parotid neoplasm","type":"exact"},{"name":"parotid tumor","type":"exact"},{"name":"parotid tumour","type":"exact"},{"name":"tumor of parotid","type":"exact"},{"name":"tumor of parotid gland","type":"exact"},{"name":"tumor of the parotid","type":"exact"},{"name":"tumor of the parotid gland","type":"exact"},{"name":"tumour of parotid","type":"exact"},{"name":"tumour of parotid gland","type":"exact"},{"name":"tumour of the parotid","type":"exact"},{"name":"tumour of the parotid gland","type":"exact"}],"termid":"MONDO:0021243","xrefs":{"Monarch":{"xref_id":"0021243"}}}


id: PBO:0085178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of four subunits of the ESCRT-III complex; involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway; recruited from the cytoplasm to endosomal membranes; ESCRT-III stands for endosomal sorting complex required for transport III","termid":"PBO:0085178"}


id: PBO:0091964
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously curated onto incorrect strand","termid":"PBO:0091964"}


id: PBO:0054554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1955","termid":"PBO:0054554"}


id: MONDO:1012363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy of the diaphragmatic muscles, non-human animal","termid":"MONDO:1011797"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy of the diaphragmatic muscles, cattle","secondary_identifiers":["OMIA:001319-9913"],"termid":"MONDO:1012363","xrefs":{"Monarch":{"xref_id":"1012363"}}}


id: PBO:0015269
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major transcript in 972 h- is non-functional as it contains a stop codon","termid":"PBO:0015269"}


id: PBO:0064039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 73","termid":"PBO:0064039"}


id: GO:0090553
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is the apical most portion of a unicellular trichome apex.","definition_xrefs":["GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"unicellular trichome apex","termid":"GO:0090552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome tip","termid":"GO:0090553"}


id: SO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An episome that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"engineered_plasmid","termid":"SO:0000637"},{"relation_name":"is_a","term_name":"episome","termid":"SO:0000768"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_episome","synonyms":[{"name":"engineered episome","type":"exact"}],"termid":"SO:0000779"}


id: GO:1903920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin filament severing.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:23325791","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"positively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin filament severing","synonyms":[{"name":"activation of F-actin severing","type":"narrow"},{"name":"activation of actin filament severing","type":"narrow"},{"name":"activation of actin filament severing activity","type":"related"},{"name":"activation of barbed-end actin capping/severing activity","type":"related"},{"name":"positive regulation of F-actin severing","type":"exact"},{"name":"positive regulation of actin filament severing activity","type":"related"},{"name":"positive regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"up regulation of F-actin severing","type":"exact"},{"name":"up regulation of actin filament severing","type":"exact"},{"name":"up regulation of actin filament severing activity","type":"related"},{"name":"up regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"up-regulation of F-actin severing","type":"exact"},{"name":"up-regulation of actin filament severing","type":"exact"},{"name":"up-regulation of actin filament severing activity","type":"related"},{"name":"up-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"upregulation of F-actin severing","type":"exact"},{"name":"upregulation of actin filament severing","type":"exact"},{"name":"upregulation of actin filament severing activity","type":"related"},{"name":"upregulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903920"}


id: GO:0042423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"},{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catecholamine biosynthetic process","secondary_identifiers":["Reactome:R-HSA-209905","Wikipedia:Catecholamines"],"synonyms":[{"name":"catecholamine anabolism","type":"exact"},{"name":"catecholamine biosynthesis","type":"exact"},{"name":"catecholamine formation","type":"exact"},{"name":"catecholamine synthesis","type":"exact"}],"termid":"GO:0042423"}


id: MONDO:0023567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kozlowski Brown Hardwick syndrome","secondary_identifiers":["MESH:C537506","UMLS:C2931511","MEDGEN:419822"],"synonyms":[{"name":"unusual facies, hooked clavicles, 13 pairs of ribs, widened metaphyses, square shaped vertebral bodies and communicating hydrocephalus","type":"related"}],"termid":"MONDO:0023567","xrefs":{"Monarch":{"xref_id":"0023567"}}}


id: GO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:dph","GOC:krc","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposition, DNA-mediated (obsolete GO:0000335)","synonyms":[{"name":"down regulation of DNA transposition","type":"exact"},{"name":"down-regulation of DNA transposition","type":"exact"},{"name":"downregulation of DNA transposition","type":"exact"},{"name":"inhibition of DNA transposition","type":"narrow"},{"name":"negative regulation of DNA transposition","type":"exact"}],"termid":"GO:0000335"}


id: GO:0075104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont calcium or calmodulin-mediated signal transduction (obsolete GO:0075104)","synonyms":[{"name":"positive regulation by host of symbiont Ca++ or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075104"}


id: FYPO:0007420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transcription at telomere","synonyms":[{"name":"abnormal telomeric transcription","type":"exact"},{"name":"abnormal transcription from telomere","type":"exact"}],"termid":"FYPO:0007420"}


id: MONDO:0004488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma that arises from the cervix and is characterized by the presence of a glandular component exhibiting architectural complexity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical adenomyoma","termid":"MONDO:0003238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical atypical polypoid adenomyoma","secondary_identifiers":["DOID:8179","NCIT:C40234","UMLS:C1516409","MEDGEN:273123"],"termid":"MONDO:0004488","xrefs":{"Monarch":{"xref_id":"0004488"}}}


id: GO:0036203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + O2 + NADPH + H+ = 10beta,14beta-dihydroxytaxa-4(20),11-dien-5alpha-yl acetate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"taxoid 14-beta-hydroxylase activity","secondary_identifiers":["RHEA:31971","KEGG_REACTION:R09867"],"termid":"GO:0036203"}


id: GO:0106267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3-chloro-2,4,6-trihydroxyphenyl)hexan-1-one + chloride + FADH2 + O2 = (3,5-dichloro-2,4,6-trihydroxyphenyl)hexan-1-one + FAD + 2 H2O.","definition_xrefs":["PMID:20231486","RHEA:64360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3,5 dichloro-THPH synthase activity","termid":"GO:0106267"}


id: MONDO:0037739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the cauda equina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cauda equina neoplasm","termid":"MONDO:0003164"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of cauda equina","secondary_identifiers":["icd11.foundation:214796583","MEDGEN:673271","SCTID:92047003","UMLS:C0686404"],"synonyms":[{"name":"benign neoplasm of cauda equina","type":"exact"}],"termid":"MONDO:0037739","xrefs":{"Monarch":{"xref_id":"0037739"}}}


id: PBO:0072642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of telomere elongation helicase 1","termid":"PBO:0072642"}


id: PBO:0042543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8 pseudogene 2","termid":"PBO:0042543"}


id: GO:0002671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte anergy","termid":"GO:0002912"},{"relation_name":"negatively_regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell anergy","synonyms":[{"name":"down regulation of B cell anergy","type":"exact"},{"name":"down-regulation of B cell anergy","type":"exact"},{"name":"downregulation of B cell anergy","type":"exact"},{"name":"inhibition of B cell anergy","type":"narrow"},{"name":"negative regulation of B lymphocyte anergy","type":"exact"},{"name":"negative regulation of B-cell anergy","type":"exact"},{"name":"negative regulation of B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002671"}


id: GO:0006474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"N-terminal protein amino acid acetylation","synonyms":[{"name":"N(alpha)-terminal acetylation","type":"narrow"}],"termid":"GO:0006474"}


id: GO:0021922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of a cell in the dorsal spinal cord that affects the rate of its division.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","PMID:12593981","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in regulation of cell proliferation in dorsal spinal cord (obsolete GO:0021922)","synonyms":[{"name":"Wnt receptor signaling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"Wnt receptor signalling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"},{"name":"Wnt-activated signaling pathway involved in regulation of cell proliferation in dorsal spinal cord","type":"exact"}],"termid":"GO:0021922"}


id: GO:0004021
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113067],"is_not":false,"summary":null,"term":"GO:0004021"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.","definition_xrefs":["RHEA:19453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine-oxo-acid transaminase activity","termid":"GO:0047635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"L-alanine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-507775","Reactome:R-HSA-70523","KEGG_REACTION:R00258","Reactome:R-HSA-70524","EC:2.6.1.2","Reactome:R-HSA-507749","MetaCyc:ALANINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"ALT","type":"related"},{"name":"GPT","type":"related"},{"name":"L-alanine aminotransferase activity","type":"broad"},{"name":"L-alanine transaminase activity","type":"broad"},{"name":"L-alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine aminotransferase activity","type":"broad"},{"name":"alanine transaminase activity","type":"broad"},{"name":"alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine-pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine aminotransferase","type":"broad"},{"name":"glutamic acid-pyruvic acid transaminase activity","type":"related"},{"name":"glutamic--alanine transaminase activity","type":"related"},{"name":"glutamic--pyruvic transaminase activity","type":"related"},{"name":"glutamic-pyruvic aminotransferase activity","type":"related"},{"name":"pyruvate transaminase activity","type":"broad"},{"name":"pyruvate-alanine aminotransferase activity","type":"related"},{"name":"pyruvate-glutamate transaminase activity","type":"related"}],"termid":"GO:0004021","terms_by_termid":{"GO:0004021":null}}


id: MONDO:0016190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of myofibrillar proteins","termid":"MONDO:0016186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of protein ZASP","secondary_identifiers":["UMLS:C5680840","GARD:20429","MEDGEN:1842575","Orphanet:209050"],"termid":"MONDO:0016190","xrefs":{"Monarch":{"xref_id":"0016190"}}}


id: MONDO:0015025
data:
  {"annotated_genes":["SJAG_01753"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88618],"is_not":false,"summary":null,"term":"MONDO:0015025"}]},"cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the MDH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01753":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 51","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617339","DOID:0080433","UMLS:C4479208","MEDGEN:1372686"],"synonyms":[{"name":"DEE51","type":"exact"},{"name":"EIEE51","type":"exact"},{"name":"MDH2 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 51","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in MDH2","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 51","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 51; EIEE51","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 51","type":"exact"}],"termid":"MONDO:0015025","terms_by_termid":{"MONDO:0015025":null},"xrefs":{"Monarch":{"xref_id":"0015025"}}}


id: GO:1902628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of assembly of a large subunit precursor of preribosome.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22735702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of assembly of large subunit precursor of preribosome","termid":"GO:1902627"},{"relation_name":"positively_regulates","term_name":"assembly of large subunit precursor of preribosome","termid":"GO:1902626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of assembly of large subunit precursor of preribosome","synonyms":[{"name":"activation of 66S preribosome assembly","type":"narrow"},{"name":"activation of 66S preribosome formation","type":"narrow"},{"name":"activation of assembly of large subunit precursor of preribosome","type":"narrow"},{"name":"activation of preribosome, large subunit precursor formation","type":"narrow"},{"name":"positive regulation of 66S preribosome assembly","type":"narrow"},{"name":"positive regulation of 66S preribosome formation","type":"narrow"},{"name":"positive regulation of preribosome, large subunit precursor formation","type":"exact"},{"name":"up regulation of 66S preribosome assembly","type":"narrow"},{"name":"up regulation of 66S preribosome formation","type":"narrow"},{"name":"up regulation of assembly of large subunit precursor of preribosome","type":"exact"},{"name":"up regulation of preribosome, large subunit precursor formation","type":"exact"},{"name":"up-regulation of 66S preribosome assembly","type":"narrow"},{"name":"up-regulation of 66S preribosome formation","type":"narrow"},{"name":"up-regulation of assembly of large subunit precursor of preribosome","type":"exact"},{"name":"up-regulation of preribosome, large subunit precursor formation","type":"exact"},{"name":"upregulation of 66S preribosome assembly","type":"narrow"},{"name":"upregulation of 66S preribosome formation","type":"narrow"},{"name":"upregulation of assembly of large subunit precursor of preribosome","type":"exact"},{"name":"upregulation of preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902628"}


id: PBO:0039035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 12, pseudogene","termid":"PBO:0039035"}


id: GO:1990638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte colony-stimulating factor stimulus.","definition_xrefs":["PMID:9488469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to granulocyte colony-stimulating factor","synonyms":[{"name":"response to G-CSF","type":"exact"}],"termid":"GO:1990638"}


id: GO:1903792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monoatomic anion transport","synonyms":[{"name":"down regulation of anion transport","type":"exact"},{"name":"down-regulation of anion transport","type":"exact"},{"name":"downregulation of anion transport","type":"exact"},{"name":"inhibition of anion transport","type":"narrow"},{"name":"negative regulation of anion transport","type":"broad"}],"termid":"GO:1903792"}


id: GO:0007232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated in response to osmotic change, as mediated through a Sho1 osmosensor system.","definition_xrefs":["GOC:jl","PMID:26787842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensory signaling pathway","termid":"GO:0007231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"osmosensory signaling pathway via Sho1 osmosensor","synonyms":[{"name":"osmosensory signalling pathway via Sho1 osmosensor","type":"exact"},{"name":"signal transduction during osmotic stress via Sho1 osmosensor","type":"exact"}],"termid":"GO:0007232"}


id: GO:0031948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid metabolic process","termid":"GO:0031945"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"},{"relation_name":"is_a","term_name":"positive regulation of steroid hormone biosynthetic process","termid":"GO:0090031"},{"relation_name":"positively_regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of glucocorticoid biosynthetic process","synonyms":[{"name":"activation of glucocorticoid biosynthetic process","type":"narrow"},{"name":"stimulation of glucocorticoid biosynthetic process","type":"narrow"},{"name":"up regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"up-regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"upregulation of glucocorticoid biosynthetic process","type":"exact"}],"termid":"GO:0031948"}


id: PR:000030002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"Spom-CHEK2","type":"exact"}],"termid":"PR:000030002"}


id: GO:0046008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}


id: GO:1903060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein lipidation.","definition_xrefs":["PMID:21909394","GOC:TermGenie","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein metabolic process","termid":"GO:0050748"},{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"negatively_regulates","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein lipidation","synonyms":[{"name":"down regulation of lipid:protein modification","type":"exact"},{"name":"down regulation of protein amino acid lipidation","type":"exact"},{"name":"down regulation of protein lipidation","type":"exact"},{"name":"down-regulation of lipid:protein modification","type":"exact"},{"name":"down-regulation of protein amino acid lipidation","type":"exact"},{"name":"down-regulation of protein lipidation","type":"exact"},{"name":"downregulation of lipid:protein modification","type":"exact"},{"name":"downregulation of protein amino acid lipidation","type":"exact"},{"name":"downregulation of protein lipidation","type":"exact"},{"name":"inhibition of lipid:protein modification","type":"narrow"},{"name":"inhibition of protein amino acid lipidation","type":"narrow"},{"name":"inhibition of protein lipidation","type":"narrow"},{"name":"negative regulation of lipid:protein modification","type":"exact"},{"name":"negative regulation of protein amino acid lipidation","type":"exact"}],"termid":"GO:1903060"}


id: GO:0061580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a colonic epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal epithelial cell migration","termid":"GO:0061582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon epithelial cell migration","termid":"GO:0061580"}


id: PBO:0067833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 135","termid":"PBO:0067833"}


id: PBO:0058994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein MLX","termid":"PBO:0058994"}


id: PBO:0073002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 3","termid":"PBO:0073002"}


id: GO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of salicylic acid.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of salicylic acid metabolic process","termid":"GO:0010337"},{"relation_name":"regulates","term_name":"salicylic acid biosynthetic process","termid":"GO:0009697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of salicylic acid biosynthetic process","termid":"GO:0080142"}


id: GO:0043408
data:
  {"annotated_genes":["SJAG_03705","SJAG_03185","SJAG_02135","SJAG_03828","SJAG_01199","SJAG_01587","SJAG_00845","SJAG_02878","SJAG_02013","SJAG_04666","SJAG_01978","SJAG_02486","SJAG_05000","SJAG_06592","SJAG_00975","SJAG_00610","SJAG_06621","SJAG_02945","SJAG_03263","SJAG_03893","SJAG_04522","SJAG_02233","SJAG_01885","SJAG_03903","SJAG_03453","SJAG_04825","SJAG_01787","SJAG_00027","SJAG_06622","SJAG_02000","SJAG_01114","SJAG_00781","SJAG_00318","SJAG_02183","SJAG_00424","SJAG_03969","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76405,82124],"is_not":false,"summary":null,"term":"GO:0043408"},{"annotations":[101222,105596,108856,109423,120182,97632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[101224,97754,96815,120183,118927,93440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[89973,108949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[94190,119756,69340,91210,92538,89850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[110758,97040,110763,114317,110764,113651,110759,110762,119219,110760,110761,120146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[105498,89909,116463,117431,92617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAP kinase (MAPK) cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_00975":null,"SJAG_01114":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01787":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02486":null,"SJAG_02878":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03453":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of MAP kinase cascade","type":"exact"},{"name":"regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"regulation of MAPKKK cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043408","terms_by_termid":{"GO:0043408":null,"GO:0062038":null,"GO:0180040":null,"GO:1900745":null,"GO:1903138":null,"GO:1903139":null,"GO:1903753":null}}


id: MONDO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder affecting more than one nerve.","definition_xrefs":["NCIT:C26951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy","secondary_identifiers":["DOID:1389","UMLS:C0152025","EFO:0009562","SCTID:42345000","icd11.foundation:58868923","ICD9:357.4","MESH:D011115","MEDGEN:57502","ICD9:356.9"],"synonyms":[{"name":"polyneuropathy","type":"exact"}],"termid":"MONDO:0001824","xrefs":{"Monarch":{"xref_id":"0001824"}}}


id: GO:1901568
data:
  {"annotated_genes":["SJAG_03471","SJAG_03909","SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[80567,78963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid derivative metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid derivative metabolism","type":"exact"}],"termid":"GO:1901568","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: PBO:0064356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phorbol-12-myristate-13-acetate-induced protein 1","termid":"PBO:0064356"}


id: PBO:0078788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 11-2","termid":"PBO:0078788"}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: PBO:0080733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing oxidoreductase","termid":"PBO:0080733"}


id: MONDO:0021246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the pharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pharynx neoplasm","secondary_identifiers":["ICD10CM:C00-C14","UMLS:C0031347","MEDGEN:45844","NCIT:C3325"],"synonyms":[{"name":"neoplasm of pharynx","type":"exact"},{"name":"neoplasm of the pharynx","type":"exact"},{"name":"pharyngeal neoplasms","type":"exact"},{"name":"pharyngeal tumor","type":"exact"},{"name":"pharyngeal tumour","type":"exact"},{"name":"pharynx neoplasm (disease)","type":"exact"},{"name":"pharynx tumor","type":"exact"},{"name":"pharynx tumour","type":"exact"},{"name":"tumor of pharynx","type":"exact"},{"name":"tumor of the pharynx","type":"exact"},{"name":"tumour of pharynx","type":"exact"},{"name":"tumour of the pharynx","type":"exact"}],"termid":"MONDO:0021246","xrefs":{"Monarch":{"xref_id":"0021246"}}}


id: PBO:0055972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 1","termid":"PBO:0055972"}


id: MONDO:0011744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary intraosseous venous malformation is a rare, genetic vascular anomaly characterized by severe blood vessel expansion (most frequently within the craniofacial bones) with painless bone enlargement (usually of mandibule, maxilla and/or orbital, nasal, and frontal bones), typically resulting in facial asymmetry and contour deformation. Midline abnormalities, such as diastasis recti, supraumbilical raphe, and hiatus hernia, are commonly associated. Additional features reported include gingival bleeding, ectopic tooth eruption, exophthalmos, loss of vision, nausea, and vomiting.","definition_xrefs":["Orphanet:140436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"infantile hemangioma of rare localization","termid":"MONDO:0016223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary intraosseous venous malformation","secondary_identifiers":["MEDGEN:376071","MESH:C564648","GARD:16961","OMIM:606893","SCTID:764100007","UMLS:C1847197"],"synonyms":[{"name":"hemangioma, intraosseous","type":"related"},{"name":"intraosseous hemangioma","type":"exact"},{"name":"osseous venous malformation","type":"exact"},{"name":"vascular malformation osseous","type":"related"},{"name":"vascular malformation, primary intraosseous","type":"related"}],"termid":"MONDO:0011744","xrefs":{"Monarch":{"xref_id":"0011744"}}}


id: MONDO:1012233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"quaking, non-human animal","termid":"MONDO:1011629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaking, golden hamster","secondary_identifiers":["OMIA:000846-10036"],"termid":"MONDO:1012233","xrefs":{"Monarch":{"xref_id":"1012233"}}}


id: FYPO:0005758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from late-firing origins is abnormal.","definition_xrefs":["PomBase:mah","PMID:22987637","GO:0101017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from late origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of late origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at late origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late replication origin","type":"exact"}],"termid":"FYPO:0005758"}


id: PBO:0052628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6B","termid":"PBO:0052628"}


id: PBO:0090945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps53","termid":"PBO:0090945"}


id: MONDO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A conventional osteosarcoma characterized by the presence of spindle shaped cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibrosarcomatous osteosarcoma","secondary_identifiers":["DOID:7603","MEDGEN:79012","NCIT:C4020","ONCOTREE:FIOS","UMLS:C0279602","ICDO:9182/3"],"synonyms":[{"name":"FIOS","type":"related"},{"name":"fibroblastic osteogenic sarcoma","type":"exact"},{"name":"fibroblastic osteosarcoma","type":"exact"},{"name":"fibroblastic osteosarcoma (morphologic abnormality)","type":"exact"},{"name":"fibrosarcomatous osteogenic sarcoma","type":"exact"},{"name":"fibrosarcomatous osteosarcoma","type":"exact"}],"termid":"MONDO:0004301","xrefs":{"Monarch":{"xref_id":"0004301"}}}


id: GO:0008996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of single-stranded RNA that is monophosphorylated at its 5'-end; cleavage occurs predominantly at positions 5 and 6 nucleotides from the 5'-end and in A + U-rich regions, and is blocked by the presence of a 5'-triphosphate group.","definition_xrefs":["PMID:10722715","PMID:16854990"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonuclease G activity (obsolete GO:0008996)","termid":"GO:0008996"}


id: PBO:0088807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein Pof11","termid":"PBO:0088807"}


id: GO:0016454
data:
  {"annotated_genes":["SJAG_02305","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80610,78539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"},{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02305":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"C-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016454","terms_by_termid":{"GO:0004758":null}}


id: PBO:0050755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 17","termid":"PBO:0050755"}


id: PBO:0064262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing B1","termid":"PBO:0064262"}


id: GO:0070403
data:
  {"annotated_genes":["SJAG_04186","SJAG_04039","SJAG_01075","SJAG_04652","SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58527,60464,67203,80437,113805],"is_not":false,"summary":null,"term":"GO:0070403"}]},"cv_name":"molecular_function","definition":"Binding to the oxidized form, NAD, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NAD binding","termid":"GO:0051287"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01075":null,"SJAG_03152":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NAD+ binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD (oxidized) binding","type":"exact"},{"name":"NAD binding","type":"related"},{"name":"oxidized NAD binding","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0070403","terms_by_termid":{"GO:0070403":null}}


id: GO:0020013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism modulates the frequency, rate or extent of erythrocyte aggregation in its host organism, e.g. the binding of parasite-infected erythrocytes to uninfected erythrocytes.","definition_xrefs":["GOC:mb","GOC:dgh","PMID:21305024","GOC:pr","GOC:add","PMID:19467172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host erythrocyte aggregation","secondary_identifiers":["Wikipedia:Rosetting"],"synonyms":[{"name":"modulation by symbiont of host erythrocyte aggregation","type":"exact"},{"name":"rosetting","type":"exact"}],"termid":"GO:0020013"}


id: PBO:0070178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 93 pseudogene","termid":"PBO:0070178"}


id: PATO:0000874
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000874 fearful (obsolete PATO:0000874)","termid":"PATO:0000874"}


id: FYPO:0000877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"decreased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000877"}


id: PBO:0052572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 5A","termid":"PBO:0052572"}


id: PBO:0085654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial function; interacts with Hsp82p and copurifies with Ipl1p; expression is copper responsive and downregulated in strains deleted for MAC1, a copper-responsive transcription factor; human homolog MYG1 complements yeast null mutant","termid":"PBO:0085654"}


id: MONDO:0016890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8p deletion is a chromosome abnormality that affects many different parts of the body. People with this condition are missing genetic material located on the short arm (p) of chromosome 8 in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of the deletion and which genes are involved. Most cases are not inherited, although affected people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 8","termid":"MONDO:0016873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 8","secondary_identifiers":["MEDGEN:444105","UMLS:C2931635","icd11.foundation:635585868","GARD:3768","MESH:C537826","Orphanet:261920"],"synonyms":[{"name":"8p deletion","type":"related"},{"name":"8p monosomy","type":"related"},{"name":"chromosome 8p deletion","type":"related"},{"name":"deletion 8p","type":"related"},{"name":"monosomy 8p","type":"related"},{"name":"partial deletion of chromosome 8p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 8","type":"exact"},{"name":"partial monosomy 8p","type":"related"},{"name":"partial monosomy of chromosome 8p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016890","xrefs":{"Monarch":{"xref_id":"0016890"}}}


id: PBO:0075524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E4","termid":"PBO:0075524"}


id: GO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"gamma-delta intraepithelial T cell development","type":"related"},{"name":"gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002304"}


id: MONDO:0019985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular dysgenesis","termid":"MONDO:0017609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"drug-related renal tubular dysgenesis","secondary_identifiers":["Orphanet:97368","MEDGEN:1771212","UMLS:C5438798","GARD:19378"],"termid":"MONDO:0019985","xrefs":{"Monarch":{"xref_id":"0019985"}}}


id: MONDO:0800357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hyperpigmentation, progressive cribriform and zosteriform","secondary_identifiers":["UMLS:C0263579","MEDGEN:75526"],"synonyms":[{"name":"PCZH","type":"exact"}],"termid":"MONDO:0800357","xrefs":{"Monarch":{"xref_id":"0800357"}}}


id: PBO:0087948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4E; mRNA cap binding protein and subunit of the mRNA cap-binding complex (eIF4F) along with eIF4A (Tif1p/Tif2p) and eIF4G (Tif4631p/Tif4632p), that mediates cap-dependent translation; required with eIF4G for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; protein abundance increases in response to DNA replication stress; human homolog EIF4E can complement the cdc33 null mutant","termid":"PBO:0087948"}


id: MONDO:0006230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma of the stomach resembling squamous cell carcinomas arising elsewhere in the body.","definition_xrefs":["NCIT:C5475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric squamous cell carcinoma","secondary_identifiers":["SCTID:766980008","Orphanet:418959","UMLS:C1333789","EFO:1000278","GARD:21743","MEDGEN:234302","DOID:5516"],"synonyms":[{"name":"gastric (stomach) squamous cell cancer","type":"exact"},{"name":"gastric squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of stomach","type":"exact"},{"name":"squamous cell carcinoma of the stomach","type":"exact"},{"name":"stomach squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006230","xrefs":{"Monarch":{"xref_id":"0006230"}}}


id: PBO:0053651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 703","termid":"PBO:0053651"}


id: GO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the terminal bond of Xaa-Pro-Xaa motifs to release unblocked, N-terminal dipeptides from substrates including Ala-Pro-para-nitroanilide and (sequentially, at the second, fourth and sixth bonds) of the motif Tyr-Pro-Phe-Pro-Gly-Pro-Ile.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro dipeptidyl-peptidase activity (obsolete GO:0017088)","synonyms":[{"name":"X-Pro dipeptidyl-peptidase activity","type":"exact"},{"name":"Xaa-Pro dipeptidyl-peptidase activity","type":"exact"}],"termid":"GO:0017088"}


id: POMBASE_GENE_EX_REL:in_absence_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a substance is absent","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_absence_of","termid":"POMBASE_GENE_EX_REL:in_absence_of"}


id: PBO:0013841
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary microcephaly","termid":"PBO:0013841"}


id: PBO:0050811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUS1 checkpoint clamp component B","termid":"PBO:0050811"}


id: GO:0000086
data:
  {"annotated_genes":["SJAG_01044","SJAG_01901","SJAG_02771","SJAG_01076","SJAG_03309","SJAG_04597","SJAG_06592","SJAG_05373","SJAG_03927","SJAG_01000","SJAG_04394","SJAG_00216","SJAG_02563","SJAG_03026","SJAG_04671","SJAG_00883","SJAG_02392","SJAG_04140","SJAG_03854","SJAG_02576","SJAG_02858","SJAG_00364","SJAG_04287","SJAG_01146","SJAG_00526","SJAG_03048","SJAG_04486","SJAG_02332","SJAG_00640","SJAG_01205","SJAG_04332","SJAG_00214","SJAG_01118","SJAG_00117","SJAG_03695","SJAG_02342","SJAG_03592","SJAG_03160","SJAG_02266","SJAG_01010","SJAG_01605","SJAG_01680","SJAG_01837","SJAG_03529","SJAG_04655","SJAG_01805","SJAG_01873","SJAG_00600","SJAG_03486","SJAG_01855","SJAG_02074","SJAG_01456","SJAG_03942","SJAG_01311","SJAG_03126","SJAG_02723","SJAG_02592","SJAG_01084","SJAG_04469","SJAG_00082","SJAG_03602","SJAG_00318","SJAG_02098","SJAG_01429","SJAG_03073","SJAG_04280","SJAG_03067","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78941,104154,106104,108202,119865],"is_not":false,"summary":null,"term":"GO:0000086"},{"annotations":[103234,117844,96183,91768,102326],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[111138,81218,100973,93202,76585,102327,113867,80627,74013,101140,108429,117900,118647,118952,72799,95738,119124],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[100210,117846,97631,96316],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[60754,111139,113561,62287,101142,76937,74015,102841,81091,118865,108430,90892,93203,67758,61463],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[113649,114315,108824,60652,95336,80285,94990,58742,96142,108461,113267,116309,106298,102787],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[93510,100783,95577,93910,100211,96185,112168,75159,72415,110390,89823,103553,96146,113032,89814,109045,105285,118328,118517],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[103184,89618],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[113798],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle transition by which a cell in G2 commits to M phase. The process begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed. This is accomplished by activating a positive feedback loop that results in the accumulation of unphosphorylated and active M cyclin/CDK complex.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"is_a","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01311":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03529":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04469":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04655":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"G2/M transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-69275"],"synonyms":[{"name":"mitotic G2/M transition","type":"exact"}],"termid":"GO:0000086","terms_by_termid":{"GO:0000086":null,"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0044878":null,"GO:1905287":null}}


id: MONDO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An elongated and multinodular neurofibroma, formed when the tumor involves either multiple trunks of a plexus or multiple fascicles of a large nerve, such as the sciatic. Some plexiform neurofibromas resemble a bag of worms, others produce a massive ropy enlargement of the nerve. (Adapted from WHO.)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexiform neurofibroma","secondary_identifiers":["HP:0009732","SCTID:403818001","DOID:5151","MESH:D018318","MEDGEN:64640","NCIT:C3797","ICDO:9550/0","UMLS:C0206728","ICD9:215.9"],"synonyms":[{"name":"plexiform neurofibroma","type":"exact"},{"name":"plexiform neurofibroma (disease)","type":"exact"}],"termid":"MONDO:0003304","xrefs":{"Monarch":{"xref_id":"0003304"}}}


id: PBO:0038396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_in_presence_of","termid":"PBO:0038396"}


id: PBO:0083169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps YAL044W-A","termid":"PBO:0083169"}


id: MONDO:0700138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myxoma that occurs in the rectum of a cow.","definition_xrefs":["NCIT:C134768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine rectal myxoma","termid":"MONDO:0700138","xrefs":{"Monarch":{"xref_id":"0700138"}}}


id: PBO:0059408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S34","termid":"PBO:0059408"}


id: MONDO:0003181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare usually indolent lung carcinoma characterized by a cribiform and tubular pattern and the presence of glandular epithelial cells. Clinical symptoms include shortness of breath, cough, wheeze, hemopytsis and chest pain.","definition_xrefs":["NCIT:C5666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoid cystic carcinoma","termid":"MONDO:0004971"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenoid cystic carcinoma","secondary_identifiers":["ONCOTREE:LUACC","UMLS:C1334439","DOID:4872","SCTID:707466008","ICD9:162.9","MEDGEN:232709"],"synonyms":[{"name":"LUACC","type":"related"},{"name":"adenocystic carcinoma of lung","type":"exact"},{"name":"adenocystic carcinoma of the lung","type":"exact"},{"name":"adenoid cystic carcinoma of lung","type":"exact"},{"name":"adenoid cystic carcinoma of the lung","type":"exact"},{"name":"lung adenocystic carcinoma","type":"exact"},{"name":"lung adenoid cystic cancer","type":"exact"},{"name":"lung adenoid cystic carcinoma","type":"exact"},{"name":"pulmonary adenocystic carcinoma","type":"exact"},{"name":"pulmonary adenoid cystic carcinoma","type":"exact"}],"termid":"MONDO:0003181","xrefs":{"Monarch":{"xref_id":"0003181"}}}


id: PBO:0052216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 3","termid":"PBO:0052216"}


id: PBO:0111808
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0111808"}


id: GO:0071709
data:
  {"annotated_genes":["SJAG_00900","SJAG_04080","SJAG_02169","SJAG_04010","SJAG_04489","SJAG_04470","SJAG_03892","SJAG_01769","SJAG_00114","SJAG_02320","SJAG_02529","SJAG_02248","SJAG_04615","SJAG_01242","SJAG_03783","SJAG_01050","SJAG_04781","SJAG_01467","SJAG_00826","SJAG_03891","SJAG_00663","SJAG_04275","SJAG_02241","SJAG_03746","SJAG_03536","SJAG_01745","SJAG_00971","SJAG_00416","SJAG_03688","SJAG_04922","SJAG_03915","SJAG_02736","SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99335,99372,111939,115768,120702,101692,100612,97154,93062,103505,107092,109199,120401,120885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[121054,108373,121051,97745,104944,93115,102680,121053,99740,121052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"},{"annotations":[73796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031468"},{"annotations":[92497],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[118777],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[117811,96281,101624,101623,101909,107821],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00416":null,"SJAG_00663":null,"SJAG_00826":null,"SJAG_00900":null,"SJAG_00971":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02736":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04489":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"membrane assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32243490":null},"termid":"GO:0071709","terms_by_termid":{"GO:0007084":null,"GO:0031468":null,"GO:0032120":null,"GO:0070583":null,"GO:1903023":null,"GO:1903024":null}}


id: GO:0021840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that control the direction of migration of interneurons as a component of the process of migration from the subpallium to the cortex.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:12626695","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"part_of","term_name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}


id: GO:0031556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of transcriptional regulation at the level of early termination. This process can occur only in prokaryotes, where transcription of an operon into messenger RNA and translation of that mRNA into polypeptides occur simultaneously. The general principle is that alternative mRNA secondary structures occur under different physiological conditions such as available amount of a particular amino acid. One set of conditions favors early termination of transcription. In the classic example of the trp biosynthesis operon, translation of the gene for a short, trp-containing polypeptide called the trp operon leader peptide pauses either at a trp codon (if tryptophan is scarce) or the stop codon (if trp is readily available). In the former situation transcription continues, but in the latter a Rho-independent terminator forms and reduces, or attenuates, expression of the tryptophan biosynthesis genes. Although the polypeptides encoded by leader peptide genes appear not to be stable once their translation is complete, it is suggested by recent studies that their nascent polypeptide chains interact specifically with ribosomes, specific uncharged tRNAs, or other cellular components to inhibit release at the stop codon and improve the function of transcriptional attenuation as a regulatory switch.","definition_xrefs":["GOC:dh","ISBN:0198542682","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional attenuation","termid":"GO:0031555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"transcriptional attenuation by ribosome","synonyms":[{"name":"ribosome-mediated transcriptional attenuation","type":"exact"}],"termid":"GO:0031556"}


id: PBO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.27.9","termid":"PBO:0004228"}


id: PBO:0082974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic serine/threonine protein kinase; identified as a high-copy suppressor of the synthetic lethality of a sis2 sit4 double mutant, suggesting a role in G1/S phase progression; VHS1 has a paralog, SKS1, that arose from the whole genome duplication","termid":"PBO:0082974"}


id: PBO:0064119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 6","termid":"PBO:0064119"}


id: MONDO:0006347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the pancreas. It is characterized by the presence of malignant large cells.","definition_xrefs":["NCIT:C95582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large cell neuroendocrine carcinoma","termid":"MONDO:0005057"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"},{"relation_name":"is_a","term_name":"pancreatic endocrine carcinoma","termid":"MONDO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic large cell neuroendocrine carcinoma","secondary_identifiers":["EFO:1000442","MEDGEN:459465","UMLS:C2987239"],"synonyms":[{"name":"large cell neuroendocrine carcinoma of pancreas","type":"exact"},{"name":"pancreas large cell neuroendocrine carcinoma","type":"exact"},{"name":"pancreatic large cell NEC","type":"exact"},{"name":"pancreatic large cell NEC G3","type":"exact"},{"name":"pancreatic large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0006347","xrefs":{"Monarch":{"xref_id":"0006347"}}}


id: PBO:0004165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transporter Str1","termid":"PBO:0004165"}


id: GO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microglial cell. Microglia are glial cells that act as the immune cells of the central nervous system. They form part of the supporting structure of this system.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"macrophage differentiation","termid":"GO:0030225"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglia differentiation","synonyms":[{"name":"microglial cell differentiation","type":"exact"}],"termid":"GO:0014004"}


id: PBO:0038609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 5","termid":"PBO:0038609"}


id: MONDO:0022843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mumps infectious disease","termid":"MONDO:0000989"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mumps","termid":"MONDO:0022843","xrefs":{"Monarch":{"xref_id":"0022843"}}}


id: MONDO:0016885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 3","termid":"MONDO:0016868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 3","secondary_identifiers":["icd11.foundation:551346575","UMLS:C5679666","MEDGEN:1826020","Orphanet:261875","GARD:37"],"synonyms":[{"name":"partial deletion of chromosome 3p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 3","type":"exact"},{"name":"partial monosomy of chromosome 3p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 3","type":"exact"}],"termid":"MONDO:0016885","xrefs":{"Monarch":{"xref_id":"0016885"}}}


id: PR:Q9Y7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoheme IX farnesyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11048:SF3","PRO:DNx","OMA:SCHPO03301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.02c","secondary_identifiers":["UniProtKB:Q9Y7Y4"],"synonyms":[{"name":"Spom972h-COX10","type":"exact"},{"name":"heme O synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Y4"}


id: GO:0160216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-lactoyl-L-lysyl-[protein] = (S)-lactate + L-lysyl-[protein].","definition_xrefs":["PMID:35044827","RHEA:81387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"deacylase activity","termid":"GO:0160215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein lysine delactylase activity","termid":"GO:0160216"}


id: PBO:0085765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; interacts with rRNA transcription and ribosome biogenesis factors and the long chain fatty acyl-CoA synthetase Faa3p; FRK1 has a paralog, KIN4, that arose from the whole genome duplication","termid":"PBO:0085765"}


id: GO:0097271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location within a cellular bud neck.","definition_xrefs":["PMID:22344253","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to bud neck","synonyms":[{"name":"protein localisation to bud neck","type":"exact"},{"name":"protein localization to cellular bud neck","type":"exact"}],"termid":"GO:0097271"}


id: GO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgX isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgX immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgX immunoglobulin complex","termid":"GO:0071759"}


id: MONDO:0001878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hypertrophic pyloric stenosis that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic pyloric stenosis","termid":"MONDO:0001560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"acquired hypertrophic pyloric stenosis","secondary_identifiers":["MEDGEN:675190","ICD9:537.0","SCTID:266438007","DOID:14099","UMLS:C0700588"],"synonyms":[{"name":"acquired gastric outlet stenosis","type":"exact"},{"name":"acquired hypertrophic pyloric stenosis","type":"exact"},{"name":"adult hypertrophic pyloric stenosis","type":"exact"}],"termid":"MONDO:0001878","xrefs":{"Monarch":{"xref_id":"0001878"}}}


id: GO:1904337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["GOC:TermGenie","PMID:16303610","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ductus arteriosus closure","termid":"GO:1904335"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ductus arteriosus closure","synonyms":[{"name":"activation of ductus arteriosus closure","type":"narrow"},{"name":"up regulation of ductus arteriosus closure","type":"exact"},{"name":"up-regulation of ductus arteriosus closure","type":"exact"},{"name":"upregulation of ductus arteriosus closure","type":"exact"}],"termid":"GO:1904337"}


id: MONDO:1010290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary agenesis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary agenesis, non-human animal","secondary_identifiers":["OMIA:002520"],"termid":"MONDO:1010290","xrefs":{"Monarch":{"xref_id":"1010290"}}}


id: GO:1901735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mevalonic acid metabolic process","synonyms":[{"name":"(R) mevalonate metabolism","type":"exact"},{"name":"(R)-mevalonic acid metabolism","type":"exact"}],"termid":"GO:1901735"}


id: FYPO:0006169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to 4-nitroquinoline N-oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide","synonyms":[{"name":"normal protein phosphorylation during cellular response to 4-NQO","type":"exact"},{"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to 4NQO","type":"exact"}],"termid":"FYPO:0006169"}


id: GO:0003808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of blood coagulation factors Va and VIIIa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C (activated) activity (obsolete GO:0003808)","synonyms":[{"name":"GSAPC","type":"related"},{"name":"activated blood coagulation factor XIV activity","type":"related"},{"name":"activated protein C","type":"related"},{"name":"autoprothrombin II-A","type":"related"},{"name":"autoprothrombin IIA activity","type":"related"},{"name":"blood-coagulation factor XIVa","type":"related"},{"name":"protein C (activated) activity","type":"exact"},{"name":"protein Ca","type":"related"}],"termid":"GO:0003808"}


id: GO:0031751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a D4 dopamine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine receptor binding","termid":"GO:0050780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"D4 dopamine receptor binding","synonyms":[{"name":"D4 dopamine receptor ligand","type":"narrow"}],"termid":"GO:0031751"}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: MONDO:0004490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gestational uterine corpus choriocarcinoma (obsolete MONDO:0004490)","termid":"MONDO:0004490","xrefs":{"Monarch":{"xref_id":"0004490"}}}


id: PBO:0080450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSIG10L antisense RNA 1","termid":"PBO:0080450"}


id: GO:0070037
data:
  {"annotated_genes":["SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77301],"is_not":false,"summary":null,"term":"GO:0070037"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a pseudouridine residue in an rRNA molecule.","definition_xrefs":["GOC:mah","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6790906"],"termid":"GO:0070037","terms_by_termid":{"GO:0070037":null}}


id: PBO:0005072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DinB translesion DNA repair polymerase, pol kappa","termid":"PBO:0005072"}


id: PBO:0013824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m7G(5')pppN diphosphatase Nhm1","termid":"PBO:0013824"}


id: MONDO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare circumscribed, non-encapsulated and grossly pigmented nerve sheath tumor. It is composed of cells with the immunophenotypic and electron microscopic features of Schwann cells which contain melanosomes and are positive for melanoma markers. It usually involves spinal nerve roots but may occur in other locations. It may be associated with PRKAR1A gene mutation and Carney complex. Malignant behavior has been reported in a significant number of patients.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic neurilemmoma","secondary_identifiers":["ONCOTREE:MSCHW","MEDGEN:266292","ICD9:215.8","SCTID:404024000","UMLS:C1306247","DOID:3205","NCIT:C6970"],"synonyms":[{"name":"MSCHW","type":"related"},{"name":"melanocytic neurilemmoma","type":"exact"},{"name":"melanocytic schwannoma","type":"exact"},{"name":"melanotic neurinoma","type":"exact"},{"name":"melanotic schwannoma","type":"exact"},{"name":"melanotic schwannoma (morphologic abnormality)","type":"exact"},{"name":"pigmented neurilemmoma","type":"exact"},{"name":"pigmented schwannoma","type":"exact"}],"termid":"MONDO:0002558","xrefs":{"Monarch":{"xref_id":"0002558"}}}


id: MONDO:0015161
data:
  {"annotated_genes":["SJAG_02349","SJAG_00539","SJAG_03396","SJAG_02339","SJAG_00197","SJAG_02879","SJAG_01410","SJAG_01213","SJAG_04222","SJAG_00322","SJAG_01863","SJAG_00640","SJAG_02556","SJAG_00611","SJAG_00984","SJAG_00612","SJAG_04995","SJAG_01644","SJAG_00288","SJAG_01677","SJAG_00731","SJAG_02855","SJAG_03703","SJAG_02431","SJAG_03153","SJAG_01615","SJAG_02539","SJAG_02708","SJAG_03847","SJAG_05180","SJAG_00504","SJAG_01444","SJAG_03578","SJAG_02618","SJAG_01065","SJAG_02200"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012064"},{"annotations":[88767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010879"},{"annotations":[88450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007204"},{"annotations":[87177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014573"},{"annotations":[88925,88926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"},{"annotations":[87460,87461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"},{"annotations":[88729,88728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011911"},{"annotations":[87531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014801"},{"annotations":[88059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[88489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[86742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[88762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[88766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[88763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[87869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[89021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012853"},{"annotations":[88943,88942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008675"},{"annotations":[87923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[87218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012656"},{"annotations":[88391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012074"},{"annotations":[86913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"},{"annotations":[89016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009623"},{"annotations":[87271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013118"},{"annotations":[87138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009903"},{"annotations":[87297,87298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[86943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009998"},{"annotations":[88481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"},{"annotations":[88790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013385"},{"annotations":[87415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009558"},{"annotations":[87091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030067"},{"annotations":[87252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030077"},{"annotations":[88060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013252"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple 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disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:102285","GARD:19833","MEDGEN:1842829","UMLS:C5680373"],"synonyms":[{"name":"MCA without intellectual disability","type":"exact"},{"name":"multiple congenital anomalies without intellectual disability with or without 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id: PBO:0066154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP6 pseudogene 1","termid":"PBO:0066154"}


id: GO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with neuromedin U, a hypothalamic peptide involved in energy homeostasis and stress responses.","definition_xrefs":["GOC:jl","PMID:12584108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide binding","termid":"GO:0042923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"neuromedin U binding","synonyms":[{"name":"NMU binding","type":"exact"}],"termid":"GO:0042924"}


id: PBO:0120001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 15, pseudogene","termid":"PBO:0120001"}


id: GO:1900208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of cardiolipin metabolic process","synonyms":[{"name":"regulation of cardiolipin metabolism","type":"exact"},{"name":"regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"regulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900208"}


id: MONDO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete radioulnar synostosis with amegakaryocytic thrombocytopenia (obsolete MONDO:0000205)","termid":"MONDO:0000205","xrefs":{"Monarch":{"xref_id":"0000205"}}}


id: GO:0030242
data:
  {"annotated_genes":["SJAG_04502","SJAG_00115","SJAG_01783","SJAG_04552","SJAG_03851","SJAG_00114","SJAG_04963","SJAG_05017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81417,73248,81565,73511,73964,78978,74790,75084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"}]},"cv_name":"biological_process","definition":"The process in which peroxisomes are delivered to a type of vacuole and degraded in response to changing nutrient conditions.","definition_xrefs":["PMID:20083110","GOC:autophagy","PMID:10547367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00115":null,"SJAG_01783":null,"SJAG_03851":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04963":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"autophagy of peroxisome","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peroxisome degradation","type":"broad"},{"name":"peroxisome disassembly","type":"broad"},{"name":"pexophagy","type":"related"}],"termid":"GO:0030242","terms_by_termid":{"GO:0000425":null}}


id: PATO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having all sides of unequal length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scalene triangular","termid":"PATO:0002308"}


id: GO:0032749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-25 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-25 production","termid":"GO:0032669"},{"relation_name":"positively_regulates","term_name":"interleukin-25 production","termid":"GO:0032629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-25 production","secondary_identifiers":["GO:0045537","GO:0150150"],"synonyms":[{"name":"activation of interleukin-25 production","type":"narrow"},{"name":"positive regulation of IL-25 production","type":"exact"},{"name":"positive regulation of interleukin-25 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-25 secretion","type":"narrow"},{"name":"stimulation of interleukin-25 production","type":"narrow"},{"name":"up regulation of interleukin-25 production","type":"exact"},{"name":"up-regulation of interleukin-25 production","type":"exact"},{"name":"upregulation of interleukin-25 production","type":"exact"}],"termid":"GO:0032749"}


id: PBO:0029620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029620"}


id: MONDO:0700160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma arising from the mammary gland of a dog.","definition_xrefs":["NCIT:C147073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary neoplasms, animal","termid":"MONDO:0025483"},{"relation_name":"is_a","term_name":"adenoma, non-human","termid":"MONDO:0700133"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine mammary adenoma","termid":"MONDO:0700160","xrefs":{"Monarch":{"xref_id":"0700160"}}}


id: GO:0061210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mesonephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in mesonephros development","synonyms":[{"name":"cell-cell signalling involved in mesonephros development","type":"exact"}],"termid":"GO:0061210"}


id: MOD:01466
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:302#K","PubMed:15939799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menadione quinone derivative","termid":"MOD:00621"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"menadione quinone derivative - site C","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:01466"}


id: GO:2000387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of antral ovarian follicle growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"antral ovarian follicle growth","termid":"GO:0001547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"}


id: PBO:0046476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 1, endonuclease non-catalytic subunit","termid":"PBO:0046476"}


id: MONDO:0018187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"}],"gene_count":0,"genotype_count":0,"name":"obsolete hereditary syndromic Pierre Robin syndrome (obsolete MONDO:0018187)","secondary_identifiers":["Orphanet:363294"],"synonyms":[{"name":"genetic syndromic Pierre Robin syndrome","type":"exact"}],"termid":"MONDO:0018187","xrefs":{"Monarch":{"xref_id":"0018187"}}}


id: PBO:0027993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_exit_from_mitosis","termid":"PBO:0027993"}


id: PBO:0004452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase Hrd1, synviolin family","termid":"PBO:0004452"}


id: PBO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EHHADH antisense RNA 1","termid":"PBO:0045982"}


id: PBO:0004322
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.41","termid":"PBO:0004322"}


id: PBO:0077111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17B pseudogene 1","termid":"PBO:0077111"}


id: GO:0003986
data:
  {"annotated_genes":["SJAG_02769","SJAG_02985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77129,78473],"is_not":false,"summary":null,"term":"GO:0003986"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O = acetate + CoA + H+.","definition_xrefs":["RHEA:20289","EC:3.1.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"acetyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00227","MetaCyc:ACETYL-COA-HYDROLASE-RXN","Reactome:R-HSA-2066779","Reactome:R-HSA-390304"],"synonyms":[{"name":"acetyl coenzyme A acylase activity","type":"related"},{"name":"acetyl coenzyme A deacylase activity","type":"related"},{"name":"acetyl coenzyme A hydrolase activity","type":"related"},{"name":"acetyl-CoA acylase activity","type":"related"},{"name":"acetyl-CoA deacylase activity","type":"related"},{"name":"acetyl-CoA thiol esterase activity","type":"related"}],"termid":"GO:0003986","terms_by_termid":{"GO:0003986":null}}


id: GO:0044248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular catabolic process (obsolete GO:0044248)","synonyms":[{"name":"cellular breakdown","type":"exact"},{"name":"cellular catabolism","type":"exact"},{"name":"cellular degradation","type":"exact"}],"termid":"GO:0044248"}


id: PBO:0004909
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during meiosis, specifically","termid":"PBO:0004909"}


id: GO:0102840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:3-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:3-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:3-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102840)","termid":"GO:0102840"}


id: PBO:0086034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, essential for stationary phase survival; not required for growth on nonfermentable carbon sources; possibly linked with vacuolar transport","termid":"PBO:0086034"}


id: MONDO:0014478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial congenital mirror movements in which the cause of the disease is a mutation in the DNAL4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial congenital mirror movements","termid":"MONDO:0016558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"mirror movements 3","secondary_identifiers":["GARD:16055","MEDGEN:863561","OMIM:616059","UMLS:C4015124"],"synonyms":[{"name":"DNAL4 familial congenital mirror movements","type":"exact"},{"name":"MRMV3","type":"related"},{"name":"familial congenital mirror movements caused by mutation in DNAL4","type":"exact"},{"name":"mirror movements 3","type":"exact"},{"name":"mirror movements type 3","type":"exact"}],"termid":"MONDO:0014478","xrefs":{"Monarch":{"xref_id":"0014478"}}}


id: MONDO:0800359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 64","secondary_identifiers":["MEDGEN:482676","UMLS:C3281046"],"synonyms":[{"name":"RP64","type":"exact"}],"termid":"MONDO:0800359","xrefs":{"Monarch":{"xref_id":"0800359"}}}


id: GO:1900788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pseurotin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pseurotin A metabolic process","synonyms":[{"name":"Pseurotin metabolic process","type":"related"},{"name":"Pseurotin metabolism","type":"related"},{"name":"pseurotin A metabolism","type":"exact"}],"termid":"GO:1900788"}


id: PBO:0068824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 62, pseudogene","termid":"PBO:0068824"}


id: PBO:0054001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1326","termid":"PBO:0054001"}


id: MONDO:0018543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant hypocalcemia (AD hypocalcemia) is a disorder of calcium homeostasis characterized by variable degrees of hypocalcemia with abnormally low levels of parathyroid hormone (PTH) and persistent normal or elevated calciuria.","definition_xrefs":["Orphanet:428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"calcium metabolic disease","termid":"MONDO:0005557"},{"relation_name":"is_a","term_name":"familial hypoparathyroidism","termid":"MONDO:0016390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant hypocalcemia","secondary_identifiers":["SCTID:711152006","GARD:2877","UMLS:C4048195","OMIMPS:601198","MEDGEN:884527","DOID:0090109"],"synonyms":[{"name":"AD hypocalcemia","type":"exact"},{"name":"hypocalcemia","type":"broad"},{"name":"hypocalcemia, autosomal dominant","type":"exact"}],"termid":"MONDO:0018543","xrefs":{"Monarch":{"xref_id":"0018543"}}}


id: MONDO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from leptomeningeal melanocytes and occurs in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric meningioma","termid":"MONDO:0003057"},{"relation_name":"is_a","term_name":"leptomeningeal melanoma","termid":"MONDO:0003761"},{"relation_name":"is_a","term_name":"childhood malignant melanoma","termid":"MONDO:0042494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric leptomeningeal melanoma","secondary_identifiers":["MEDGEN:232061","UMLS:C1332976","DOID:6089","NCIT:C5318"],"synonyms":[{"name":"childhood leptomeningeal melanoma","type":"exact"},{"name":"childhood meningeal melanoma","type":"exact"},{"name":"paediatric meningeal melanoma","type":"exact"},{"name":"pediatric meningeal melanoma","type":"exact"}],"termid":"MONDO:0003764","xrefs":{"Monarch":{"xref_id":"0003764"}}}


id: GO:0000184
data:
  {"annotated_genes":["SJAG_03179","SJAG_01720","SJAG_04084","SJAG_01252","SJAG_04360","SJAG_00507","SJAG_05014","SJAG_04056","SJAG_03223","SJAG_04118","SJAG_01218","SJAG_03886","SJAG_00226","SJAG_00854","SJAG_04818","SJAG_01830","SJAG_01818","SJAG_04321","SJAG_05276","SJAG_04006","SJAG_03805","SJAG_01521","SJAG_04153","SJAG_04824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71584,74997,91676,106561,107697,115419,117216],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[93296,106200,90524,117728,77088,109275,94851,110647,117989,97699,91573,103029,108280,103879,120170,99026,107068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.","definition_xrefs":["PMID:10025395","GOC:krc","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00507":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01252":null,"SJAG_01521":null,"SJAG_01720":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_03179":null,"SJAG_03223":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null,"SJAG_05276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Nonsense-mediated_mRNA_decay","Reactome:R-HSA-927802","Wikipedia:Nonsense-mediated_decay"],"synonyms":[{"name":"mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:0000184","terms_by_termid":{"GO:0000184":null,"GO:0070478":null}}


id: GO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymus development","termid":"GO:0048538"}


id: PBO:0042195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3 pseudogene 2","termid":"PBO:0042195"}


id: PBO:0064321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 3","termid":"PBO:0064321"}


id: GO:0047805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP = 3',5'-cyclic CMP + diphosphate + H+.","definition_xrefs":["RHEA:14737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0009975","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cytidylate cyclase activity","secondary_identifiers":["KEGG_REACTION:R00574","MetaCyc:CYTIDYLATE-CYCLASE-RXN","EC:4.6.1.6"],"synonyms":[{"name":"3',5'-cyclic-CMP synthase activity","type":"related"},{"name":"3'5'-cyclic-CMP synthase activity","type":"related"},{"name":"CTP diphosphate-lyase (cyclizing)","type":"related"},{"name":"CTP diphosphate-lyase (cyclizing; 3',5'-cyclic-CMP-forming)","type":"related"},{"name":"cytidyl cyclase activity","type":"related"},{"name":"cytidylyl cyclase activity","type":"related"}],"termid":"GO:0047805"}


id: GO:0047386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 2,6-bisphosphate + H2O = beta-D-fructofuranose 2-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.54","RHEA:13333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"fructose-2,6-bisphosphate 6-phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.54-RXN","KEGG_REACTION:R02730"],"synonyms":[{"name":"D-fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"beta-D-fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"fructose 2,6-bisphosphate-6-phosphohydrolase activity","type":"related"},{"name":"fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"}],"termid":"GO:0047386"}


id: PBO:0058779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7113","termid":"PBO:0058779"}


id: PBO:0047169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 2","termid":"PBO:0047169"}


id: MONDO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm of the kidney characterized by the presence of lipid-containing clear cells within a vascular network. The tumor may metastasize to unusual sites and late metastasis is common.","definition_xrefs":["NCIT:C4033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"},{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"nonpapillary renal cell carcinoma","termid":"MONDO:0007763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"clear cell renal carcinoma","secondary_identifiers":["EFO:0000349","GARD:9574","DOID:4467","ONCOTREE:CCRCC","MEDGEN:76018","SCTID:254915003","Orphanet:319276","ICD9:189.0","UMLS:C0279702"],"synonyms":[{"name":"Grawitz tumor","type":"exact"},{"name":"Grawitz tumour","type":"exact"},{"name":"RCC, clear cell adenocarcinoma","type":"exact"},{"name":"clear cell adenocarcinoma of kidney","type":"exact"},{"name":"clear cell adenocarcinoma of the kidney","type":"exact"},{"name":"clear cell adenocarcinoma, kidney","type":"exact"},{"name":"clear cell carcinoma of kidney","type":"exact"},{"name":"clear cell carcinoma of the kidney","type":"exact"},{"name":"clear cell kidney carcinoma","type":"exact"},{"name":"clear cell renal cell cancer","type":"exact"},{"name":"clear cell renal cell carcinoma","type":"exact"},{"name":"clear-cell metastatic renal cell carcinoma","type":"related"},{"name":"conventional (clear cell) renal cell adenocarcinoma","type":"exact"},{"name":"conventional (clear cell) renal cell carcinoma","type":"exact"},{"name":"conventional renal cell carcinoma","type":"exact"},{"name":"hypernephroma","type":"related"},{"name":"kidney clear cell adenocarcinoma","type":"exact"},{"name":"kidney clear cell carcinoma","type":"exact"},{"name":"renal cell carcinoma, clear cell adenocarcinoma","type":"exact"},{"name":"renal clear cell adenocarcinoma","type":"exact"},{"name":"renal clear cell carcinoma","type":"exact"}],"termid":"MONDO:0005005","xrefs":{"Monarch":{"xref_id":"0005005"}}}


id: PBO:0031046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_anisomycin","termid":"PBO:0031046"}


id: GO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in a developing lateral line.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast deposition","termid":"GO:0048885"}


id: GO:0051928
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"positively_regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion transport","type":"narrow"},{"name":"positive regulation of calcium transport","type":"exact"},{"name":"stimulation of calcium ion transport","type":"narrow"},{"name":"up regulation of calcium ion transport","type":"exact"},{"name":"up-regulation of calcium ion transport","type":"exact"},{"name":"upregulation of calcium ion transport","type":"exact"}],"termid":"GO:0051928","terms_by_termid":{"GO:1905665":null}}


id: GO:0005430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amines across synaptic vesicle membranes.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle amine transmembrane transporter activity (obsolete GO:0005430)","termid":"GO:0005430"}


id: FYPO:0006300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere inner repeat regions is increased.","definition_xrefs":["PMID:16797182","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at centromere inner repeat","synonyms":[{"name":"increased protein localisation to chromatin at centromere inner repeat","type":"exact"},{"name":"increased protein localization to chromatin at centromere imr","type":"exact"},{"name":"increased protein localization to chromatin at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006300"}


id: PBO:0083752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential core component of mitochondrial TIM22 complex; involved in insertion of polytopic proteins into inner membrane; forms channel through which proteins are imported; different regions of Tim22p have functionally diverse roles in recruiting partner subunits to core channel","termid":"PBO:0083752"}


id: GO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderochrome pyoverdine.","definition_xrefs":["PMID:15317763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"pyoverdine biosynthetic process","termid":"GO:0002049"}


id: GO:0012502
data:
  {"annotated_genes":["SJAG_01527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98330],"is_not":false,"summary":null,"term":"GO:0012502"}]},"cv_name":"biological_process","definition":"A process which directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0012503"],"synonyms":[{"name":"induction of non-apoptotic programmed cell death","type":"narrow"},{"name":"induction of nonapoptotic programmed cell death","type":"narrow"}],"termid":"GO:0012502","terms_by_termid":{"GO:0012502":null}}


id: PBO:0004799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki1","termid":"PBO:0004799"}


id: PR:O43070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbs1 gene.","definition_xrefs":["UniProtKB:O43070","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair and telomere maintenance protein nbs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.09c","synonyms":[{"name":"Spom972h-nbs1","type":"exact"}],"termid":"PR:O43070"}


id: PBO:0052689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 13","termid":"PBO:0052689"}


id: PBO:0042569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A divergent transcript","termid":"PBO:0042569"}


id: PBO:0054818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2231","termid":"PBO:0054818"}


id: PBO:0041546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 putative open reading frame 15","termid":"PBO:0041546"}


id: MONDO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete von willebrand disease (obsolete MONDO:0001545)","synonyms":[{"name":"obsolete von willebrand's disease","type":"exact"}],"termid":"MONDO:0001545","xrefs":{"Monarch":{"xref_id":"0001545"}}}


id: PBO:0036409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylglutamate synthase Arg6","termid":"PBO:0036409"}


id: GO:2000897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an amylopectin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin catabolic process","synonyms":[{"name":"Amylopectin catabolism","type":"exact"}],"termid":"GO:2000897"}


id: GO:0005710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during metaphase. Typically, sister chromatids are held together at their centromeres and chromosomes are covered with a large number of molecules, including ribonucleoproteins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete metaphase chromosome (obsolete GO:0005710)","synonyms":[{"name":"metaphase chromosome","type":"exact"}],"termid":"GO:0005710"}


id: PBO:0077240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCO1 antisense RNA 1","termid":"PBO:0077240"}


id: MONDO:0019547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wells syndrome is characterized by the presence of recurrent cellulitis-like eruptions with eosinophilia.","definition_xrefs":["Orphanet:901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Wells syndrome","secondary_identifiers":["UMLS:C0343101","ICD10CM:L98.3","NORD:1124","GARD:329","MEDGEN:91008","SCTID:238931006","icd11.foundation:1860796142","MESH:C536693","ICD9:682.9"],"synonyms":[{"name":"Familial Eosinophilic Cellulitis","type":"exact"},{"name":"Wells' syndrome","type":"related"},{"name":"bullous cellulitis with eosinophilia","type":"related"},{"name":"eosinophilic cellulitis","type":"exact"}],"termid":"MONDO:0019547","xrefs":{"Monarch":{"xref_id":"0019547"}}}


id: PBO:0048792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i3","termid":"PBO:0048792"}


id: SO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An EST read from the 5' end of a transcript that usually codes for a protein. These regions tend to be conserved across species and do not change much within a gene family.","direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_EST","synonyms":[{"name":"5' EST","type":"exact"},{"name":"five prime EST","type":"exact"}],"termid":"SO:0001208"}


id: GO:0008488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glutamate + reduced vitamin K + CO2 + O2 = peptidyl-gamma-carboxyglutamate + vitamin K epoxide.","definition_xrefs":["PMID:18374194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamyl carboxylase activity","secondary_identifiers":["Reactome:R-HSA-159795","Reactome:R-HSA-6807214","Reactome:R-HSA-163820","EC:4.1.1.90","Reactome:R-HSA-159761","Reactome:R-HSA-159803","Reactome:R-HSA-159826","Reactome:R-HSA-163810","Reactome:R-HSA-159752","Reactome:R-HSA-9673231","Reactome:R-HSA-159819","RHEA:45140"],"termid":"GO:0008488"}


id: MONDO:0020137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frontotemporal degeneration with dementia (obsolete MONDO:0020137)","secondary_identifiers":["Orphanet:98535"],"termid":"MONDO:0020137","xrefs":{"Monarch":{"xref_id":"0020137"}}}


id: GO:0140940
data:
  {"annotated_genes":["SJAG_02350","SJAG_00943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74972,112024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a histone H2 = S-adenosyl-L-homocysteine + a methylated histone H2A. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02350":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016740","GO:0008276","GO:0016741"],"is_obsolete":false,"name":"histone H2A methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone H2A methylase activity","type":"exact"},{"name":"histone H2A methylation","type":"related"}],"termid":"GO:0140940","terms_by_termid":{"GO:1990259":null}}


id: FYPO:0005410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during mitosis. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation during mitosis","synonyms":[{"name":"normal protein breakdown during mitosis","type":"exact"},{"name":"normal protein catabolic process during mitosis","type":"exact"},{"name":"normal protein catabolism during mitosis","type":"exact"},{"name":"normal protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein degradation during mitotic M phase","type":"related"},{"name":"normal protein degradation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005410"}


id: MONDO:0007554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-Dowling-Meara generalized epidermolysis bullosa simplex, formerly known as epidermolysis bullosa simplex, Kobner type (EBS-K) is a generalized basal subtype of epidermolysis bullosa simplex (EBS) characterized by non-herpetiform blisters and erosions arising in particular at sites of friction.","definition_xrefs":["Orphanet:79399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 1B, generalized intermediate","secondary_identifiers":["SCTID:90496008","ICD9:757.39","OMIM:131900","UMLS:C5561924","DOID:0080511","GARD:2147","MEDGEN:1794134"],"synonyms":[{"name":"EBS, generalised","type":"related"},{"name":"EBS, generalised intermediate","type":"exact"},{"name":"EBS, generalized","type":"related"},{"name":"EBS, generalized intermediate","type":"exact"},{"name":"EBS-K","type":"related"},{"name":"epidermolysis bullosa simplex 1B, generalized intermediate","type":"exact"},{"name":"epidermolysis bullosa simplex, Kobner type","type":"exact"},{"name":"epidermolysis bullosa simplex, Koebner type","type":"exact"},{"name":"epidermolysis bullosa simplex, Köbner type","type":"exact"},{"name":"epidermolysis bullosa simplex, generalised","type":"related"},{"name":"epidermolysis bullosa simplex, generalised intermediate","type":"related"},{"name":"epidermolysis bullosa simplex, generalised non-Dowling-Meara","type":"related"},{"name":"epidermolysis bullosa simplex, generalized","type":"related"},{"name":"epidermolysis bullosa simplex, generalized intermediate","type":"related"},{"name":"epidermolysis bullosa simplex, generalized non-Dowling-Meara","type":"related"},{"name":"generalised EBS","type":"related"},{"name":"generalised EBS, non-Dowling-Meara type","type":"exact"},{"name":"generalised epidermolysis bullosa simplex, non-Dowling-Meara type","type":"exact"},{"name":"generalized EBS","type":"related"},{"name":"generalized EBS, non-Dowling-Meara type","type":"exact"},{"name":"generalized epidermolysis bullosa simplex, non-Dowling-Meara type","type":"exact"}],"termid":"MONDO:0007554","xrefs":{"Monarch":{"xref_id":"0007554"}}}


id: PBO:0076802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 3","termid":"PBO:0076802"}


id: GO:0006421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling asparagine to asparaginyl-tRNA, catalyzed by asparaginyl-tRNA synthetase. The asparaginyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an asparagine-accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"asparaginyl-tRNA aminoacylation","termid":"GO:0006421"}


id: PBO:0108689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex RabGEF subunit Bet5","termid":"PBO:0108689"}


id: GO:0015090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Fe2+(out) = Fe2+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:9.A.9.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"low-affinity ferric iron ion transmembrane transporter activity","synonyms":[{"name":"low affinity iron ion transmembrane transporter activity","type":"exact"},{"name":"low affinity iron transporter activity","type":"exact"}],"termid":"GO:0015090"}


id: MONDO:0012408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the VSX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"},{"relation_name":"is_a","term_name":"isolated microphthalmia 2","termid":"MONDO:0012409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 3","secondary_identifiers":["GARD:15471","UMLS:C1864721","MEDGEN:400598","MESH:C566447","OMIM:610092"],"synonyms":[{"name":"MCOPCB3","type":"related"},{"name":"VSX2 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia with coloboma 3","type":"exact"},{"name":"microphthalmia, cataracts, and iris abnormalities","type":"related"},{"name":"microphthalmia, colobomatous, isolated 3","type":"related"},{"name":"microphthalmia, isolated, with coloboma 3","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in VSX2","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 3","type":"exact"}],"termid":"MONDO:0012408","xrefs":{"Monarch":{"xref_id":"0012408"}}}


id: PBO:0057060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 144","termid":"PBO:0057060"}


id: PR:O74883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12069:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.13","secondary_identifiers":["UniProtKB:O74883"],"synonyms":[{"name":"RNA polymerase III subunit C37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC330.13","type":"related"},{"name":"Spom972h-POLR3E","type":"exact"}],"termid":"PR:O74883"}


id: FYPO:0001968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glucosyltransferase activity","termid":"FYPO:0001089"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}


id: MONDO:1011101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephropathy characterized by extensive oxalate crystal deposition that occurs in sheep due to a mutation in the AGXT gene.","definition_xrefs":["PMID:33003365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"nephropathy, sheep","termid":"MONDO:1012188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hyperoxaluria, AGXT-related, sheep","secondary_identifiers":["OMIA:001672-9940"],"synonyms":[{"name":"primary hyperoxaluria type I (Oxalosis I), sheep","type":"related"}],"termid":"MONDO:1011101","xrefs":{"Monarch":{"xref_id":"1011101"}}}


id: GO:0035461
data:
  {"annotated_genes":["SJAG_04673","SJAG_02779","SJAG_05175","SJAG_03808","SJAG_00835","SJAG_02962","SJAG_02780","SJAG_03652","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73471,80918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[105433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[74149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[91910,120617,119316,91909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[91912,91911,119317,120618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[119318,91914,91913,120619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[102466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[91916,91915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The process in which a vitamin is transported across a membrane. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02152":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vitamin transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vitamin membrane transport","type":"exact"}],"termid":"GO:0035461","terms_by_termid":{"GO:0071934":null,"GO:0098717":null,"GO:0140125":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1905135":null,"GO:1990545":null}}


id: GO:1903281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of calcium:sodium antiporter activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:rl","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:19683723"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium:sodium antiporter activity (obsolete GO:1903281)","synonyms":[{"name":"activation of calcium:sodium antiporter activity","type":"narrow"},{"name":"activation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"activation of sodium/calcium exchanger","type":"narrow"},{"name":"activation of sodium:calcium exchange","type":"related"},{"name":"positive regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"positive regulation of sodium/calcium exchanger","type":"exact"},{"name":"positive regulation of sodium:calcium exchange","type":"related"},{"name":"up regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"up regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"up regulation of sodium/calcium exchanger","type":"exact"},{"name":"up regulation of sodium:calcium exchange","type":"related"},{"name":"up-regulation of calcium:sodium antiporter activity","type":"exact"},{"name":"up-regulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"up-regulation of sodium/calcium exchanger","type":"exact"},{"name":"up-regulation of sodium:calcium exchange","type":"related"},{"name":"upregulation of calcium:sodium antiporter activity","type":"exact"},{"name":"upregulation of mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"upregulation of sodium/calcium exchanger","type":"exact"},{"name":"upregulation of sodium:calcium exchange","type":"related"}],"termid":"GO:1903281"}


id: PBO:0071217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 58","termid":"PBO:0071217"}


id: PBO:0059548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Pro (CCN)","termid":"PBO:0059548"}


id: GO:0032592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial membrane (obsolete GO:0032592)","synonyms":[{"name":"integral to mitochondrial membrane","type":"narrow"}],"termid":"GO:0032592"}


id: _global:capable_of_negatively_regulating
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"_global:capable_of_regulating"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_negatively_regulating","secondary_identifiers":["RO:0002597"],"termid":"_global:capable_of_negatively_regulating"}


id: GO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with cholecystokinin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity. Cholecystokinin can act as a neuropeptide or as a gastrointestinal hormone.","definition_xrefs":["GOC:signaling","PMID:9835394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cholecystokinin receptor activity","synonyms":[{"name":"CCK receptor activity","type":"exact"}],"termid":"GO:0004951"}


id: MONDO:0033555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 73c with defective neutrophil chemotaxis and hypogammaglobulinemia","secondary_identifiers":["MEDGEN:1734177","OMIM:618987","DOID:0112062","UMLS:C5436550","GARD:18300"],"synonyms":[{"name":"IMD73C","type":"exact"},{"name":"IMMUNODEFICIENCY 73C WITH DEFECTIVE NEUTROPHIL CHEMOTAXIS AND HYPOGAMMAGLOBULINEMIA","type":"exact"}],"termid":"MONDO:0033555","xrefs":{"Monarch":{"xref_id":"0033555"}}}


id: PBO:0038974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A3 receptor","termid":"PBO:0038974"}


id: PBO:0031667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_modification_during_vegetative_growth","termid":"PBO:0031667"}


id: PBO:0034342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-distributary_of","termid":"PBO:0034342"}


id: GO:0045843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"is_a","term_name":"negative regulation of muscle tissue development","termid":"GO:1901862"},{"relation_name":"negatively_regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of striated muscle tissue development","synonyms":[{"name":"down regulation of striated muscle development","type":"exact"},{"name":"down-regulation of striated muscle development","type":"exact"},{"name":"downregulation of striated muscle development","type":"exact"},{"name":"inhibition of striated muscle development","type":"narrow"}],"termid":"GO:0045843"}


id: GO:0033702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,5S)-carveol + NAD+ = (S)-carvone + H+ + NADH.","definition_xrefs":["EC:1.1.1.275","RHEA:14825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-trans-carveol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R06117","MetaCyc:RXN-9397"],"synonyms":[{"name":"(+)-trans-carveol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033702"}


id: PBO:0061919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily E member 2","termid":"PBO:0061919"}


id: GO:0010835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein ADP-ribosylation. Protein ADP-ribosylation is the transfer, from NAD, of ADP-ribose to protein amino acids.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein ADP-ribosylation","synonyms":[{"name":"regulation of protein amino acid ADP-ribosylation","type":"exact"}],"termid":"GO:0010835"}


id: GO:0160232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing Integrator and protein phosphatase 2A core enzyme (PP2A-AC) that stably associates with the C-terminus of RNA polymerase II and promotes premature RNA polymerase II transcription termination.","definition_xrefs":["PMID:33243860","PMID:38570683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"INTAC complex","synonyms":[{"name":"integrator-PP2A complex","type":"exact"}],"termid":"GO:0160232"}


id: GO:0045921
data:
  {"annotated_genes":["SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101968],"is_not":false,"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of exocytosis","type":"narrow"},{"name":"stimulation of exocytosis","type":"narrow"},{"name":"up regulation of exocytosis","type":"exact"},{"name":"up-regulation of exocytosis","type":"exact"},{"name":"upregulation of exocytosis","type":"exact"}],"termid":"GO:0045921","terms_by_termid":{"GO:0045921":null}}


id: PBO:0067400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 507, pseudogene","termid":"PBO:0067400"}


id: PBO:0083918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms dehydrodolichyl diphosphate synthase complex with RER2 or SRT1; tet-repressible mutant shows accumulation of hypoglycosylated forms of CPY, suggesting that Nus1p may be involved in protein trafficking; mutations in human homolog NUS1 have been implicated in congenital scoliosis, neurological impairment, refractory epilepsy, hearing deficit, and visual impairment; human cis-prenyltransferase complex complements yeast null mutant","termid":"PBO:0083918"}


id: PBO:0077669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 14","termid":"PBO:0077669"}


id: MONDO:0006338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian germ cell tumor (obsolete MONDO:0006338)","termid":"MONDO:0006338","xrefs":{"Monarch":{"xref_id":"0006338"}}}


id: MONDO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005681 (obsolete MONDO:0005681)","termid":"MONDO:0005681","xrefs":{"Monarch":{"xref_id":"0005681"}}}


id: GO:0045352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Blocks the binding of interleukin-1 to interleukin-1 type I receptors.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor antagonist activity","termid":"GO:0005152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0140678","GO:0098772","GO:0005515"],"is_obsolete":false,"name":"interleukin-1 type I receptor antagonist activity","synonyms":[{"name":"IL-1ra type I","type":"exact"}],"termid":"GO:0045352"}


id: PBO:0090727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family ribosome assembly protein Sdo1","termid":"PBO:0090727"}


id: GO:1902054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23368997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"is_a","term_name":"regulation of neosartoricin biosynthetic process","termid":"GO:1902053"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of neosartoricin biosynthetic process","synonyms":[{"name":"down regulation of neosartoricin anabolism","type":"exact"},{"name":"down regulation of neosartoricin biosynthesis","type":"exact"},{"name":"down regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"down regulation of neosartoricin formation","type":"exact"},{"name":"down regulation of neosartoricin synthesis","type":"exact"},{"name":"down-regulation of neosartoricin anabolism","type":"exact"},{"name":"down-regulation of neosartoricin biosynthesis","type":"exact"},{"name":"down-regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"down-regulation of neosartoricin formation","type":"exact"},{"name":"down-regulation of neosartoricin synthesis","type":"exact"},{"name":"downregulation of neosartoricin anabolism","type":"exact"},{"name":"downregulation of neosartoricin biosynthesis","type":"exact"},{"name":"downregulation of neosartoricin biosynthetic process","type":"exact"},{"name":"downregulation of neosartoricin formation","type":"exact"},{"name":"downregulation of neosartoricin synthesis","type":"exact"},{"name":"inhibition of neosartoricin anabolism","type":"exact"},{"name":"inhibition of neosartoricin biosynthesis","type":"exact"},{"name":"inhibition of neosartoricin biosynthetic process","type":"narrow"},{"name":"inhibition of neosartoricin formation","type":"exact"},{"name":"inhibition of neosartoricin synthesis","type":"exact"},{"name":"negative regulation of neosartoricin anabolism","type":"exact"},{"name":"negative regulation of neosartoricin biosynthesis","type":"exact"},{"name":"negative regulation of neosartoricin formation","type":"exact"},{"name":"negative regulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902054"}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: MONDO:1011350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Premature aging syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature aging syndrome, non-human animal","termid":"MONDO:1011350","xrefs":{"Monarch":{"xref_id":"1011350"}}}


id: GO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenergic receptor, adenylate cyclase activating pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0071880"}


id: FYPO:0003012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells attempt to undergo mitosis before they have begun to replicate genomic DNA.","definition_xrefs":["PMID:11988741","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitosis","termid":"FYPO:0001046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"mitosis with unreplicated DNA","termid":"FYPO:0003012"}


id: GO:0006580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanolamine metabolic process","secondary_identifiers":["GO:0006645"],"synonyms":[{"name":"ethanolamine metabolism","type":"exact"}],"termid":"GO:0006580"}


id: FYPO:0003805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing one or more non-fermentable substance(s) as the only carbon source(s).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on non-fermentable carbon source","synonyms":[{"name":"decreased growth on non-fermentable carbon source","type":"broad"},{"name":"decreased vegetative cell growth on non-fermentable carbon source","type":"exact"},{"name":"reduced cell growth on non-fermentable carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0003805"}


id: PATO:0001389
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An aneuploidy quality inhering in a bearer by virtue of the bearer's containing three, instead of two, chromosomes of a particular numbered type in an organism.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Trisomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"PATO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy","termid":"PATO:0001389"}


id: PBO:0051371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-25 (pseudogene)","termid":"PBO:0051371"}


id: _global:starts
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X starts Y if X is part of Y, and A and Y share a 5' or N-terminal boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"_global:starts"}


id: PBO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL20RB antisense RNA 1","termid":"PBO:0051591"}


id: PBO:0086887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of mannitol and sorbitol with moderate affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; induced by non-fermentable carbon sources; induced in low glucose, repressed in high glucose; HXT13 has a paralog, HXT17, that arose from a segmental duplication","termid":"PBO:0086887"}


id: GO:0031666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of lipopolysaccharide-mediated signaling pathway","termid":"GO:0031664"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"activation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"positive regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"},{"name":"stimulation of lipopolysaccharide-mediated signaling pathway","type":"narrow"},{"name":"up regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"up-regulation of lipopolysaccharide-mediated signaling pathway","type":"exact"},{"name":"upregulation of lipopolysaccharide-mediated signaling pathway","type":"exact"}],"termid":"GO:0031666"}


id: MONDO:0021445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the oral cavity.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"oral cavity neoplasm","termid":"MONDO:0021245"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of oral cavity","secondary_identifiers":["NCIT:C7607","MEDGEN:91119","ICD9:210.4","UMLS:C0347197","SCTID:419645003"],"synonyms":[{"name":"benign mouth neoplasm","type":"exact"},{"name":"benign mouth tumor","type":"exact"},{"name":"benign mouth tumour","type":"exact"},{"name":"benign neoplasm of mouth","type":"exact"},{"name":"benign neoplasm of the mouth","type":"exact"},{"name":"benign neoplasm of the oral cavity","type":"exact"},{"name":"benign oral cavity neoplasm","type":"exact"},{"name":"benign oral cavity tumor","type":"exact"},{"name":"benign oral cavity tumour","type":"exact"},{"name":"benign tumor of mouth","type":"exact"},{"name":"benign tumor of oral cavity","type":"exact"},{"name":"benign tumor of the mouth","type":"exact"},{"name":"benign tumor of the oral cavity","type":"exact"},{"name":"benign tumour of mouth","type":"exact"},{"name":"benign tumour of oral cavity","type":"exact"},{"name":"benign tumour of the mouth","type":"exact"},{"name":"benign tumour of the oral cavity","type":"exact"},{"name":"oral cavity benign neoplasm","type":"exact"}],"termid":"MONDO:0021445","xrefs":{"Monarch":{"xref_id":"0021445"}}}


id: PBO:0063904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Z","termid":"PBO:0063904"}


id: PBO:0055290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2717","termid":"PBO:0055290"}


id: GO:0047202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-sinapoyl-beta-D-glucose + choline = O-sinapoylcholine + D-glucose.","definition_xrefs":["RHEA:12024","EC:2.3.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-sinapoyltransferase activity","termid":"GO:0016753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"sinapoylglucose-choline O-sinapoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03075","MetaCyc:2.3.1.91-RXN"],"synonyms":[{"name":"1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)-beta-D-glucose:choline 1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)transferase activity","type":"related"},{"name":"sinapine synthase activity","type":"related"}],"termid":"GO:0047202"}


id: GO:0018942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organometals, any metal-containing organic compound, especially one in which the metal atom is linked directly to one of more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organometal metabolic process","synonyms":[{"name":"organometal metabolism","type":"exact"}],"termid":"GO:0018942"}


id: PBO:0000799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc3 (predicted)","termid":"PBO:0000799"}


id: MONDO:0016837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p13.11 microduplication syndrome is a recently described syndrome associated with variable clinical features including behavioral abnormalities, developmental delay, congenital heart defects and skeletal anomalies.","definition_xrefs":["Orphanet:261243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16p13.11 microduplication syndrome","secondary_identifiers":["MEDGEN:930264","GARD:20775","UMLS:C4304595","SCTID:719578005","DECIPHER:80"],"synonyms":[{"name":"16p13.11 recurrent microduplication (neurocognitive disorder susceptibility locus)","type":"exact"},{"name":"dup(16)(p13.11)","type":"exact"},{"name":"trisomy 16p13.11","type":"exact"}],"termid":"MONDO:0016837","xrefs":{"Monarch":{"xref_id":"0016837"}}}


id: PR:Q9UTQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.04c gene.","definition_xrefs":["UniProtKB:Q9UTQ0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.04c","synonyms":[{"name":"CCA-adding enzyme 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1093.04c","type":"exact"},{"name":"tRNA CCA-pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA adenylyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA nucleotidyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ0"}


id: PR:Q09884
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dcr1 gene.","definition_xrefs":["UniProtKB:Q09884","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein Dicer (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.13c","synonyms":[{"name":"RNA interference pathway protein dcr1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dcr1","type":"exact"},{"name":"cell cycle control protein dcr1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09884"}


id: PBO:0039310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 4, lysine demethylase","termid":"PBO:0039310"}


id: GO:0034687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaL subunit and one beta2 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"integrin alphaL-beta2 complex","synonyms":[{"name":"Itgal-Itgb2 complex","type":"narrow"},{"name":"alphaL-beta2 integrin complex","type":"exact"}],"termid":"GO:0034687"}


id: SO:1000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that decreases the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000078 sequence_variant_decreasing_rate_of_transcription (obsolete SO:1000078)","synonyms":[{"name":"mutation decreasing rate of transcription","type":"related"},{"name":"sequence variation decreasing rate of transcription","type":"exact"}],"termid":"SO:1000078"}


id: GO:0000314
data:
  {"annotated_genes":["SJAG_00148","SJAG_00060","SJAG_03065","SJAG_05320","SJAG_03053","SJAG_00889","SJAG_04281","SJAG_04753","SJAG_01767","SJAG_02452","SJAG_04494","SJAG_00077","SJAG_00944","SJAG_00105","SJAG_01468","SJAG_02201","SJAG_01734","SJAG_00628","SJAG_00513","SJAG_02777","SJAG_00782","SJAG_04788","SJAG_04173","SJAG_02359","SJAG_01520","SJAG_02643","SJAG_02324","SJAG_04378","SJAG_00860","SJAG_03584","SJAG_02067","SJAG_04918","SJAG_04164"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99767,104878,97706,117853,75798,112208,78241,91729,74047,112490,111956,75846,93853,105798,109898,110158,114195,119935,107841,77411,95963,91703,108207,117433,99766,104107,110402,74279,80043,74911,98409,96265,70832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of an organellar ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small ribosomal subunit","termid":"GO:0015935"},{"relation_name":"part_of","term_name":"organellar ribosome","termid":"GO:0000313"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00077":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"organellar small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000314","terms_by_termid":{"GO:0005763":null}}


id: PBO:0071187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 28","termid":"PBO:0071187"}


id: PBO:0029293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus_during_meiosis","termid":"PBO:0029293"}


id: PATO:0001413
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of the bearer's angular movement about an axis; the angle rotated in a given time.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_velocity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"velocity","termid":"PATO:0002242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular velocity","termid":"PATO:0001413"}


id: MONDO:0100246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing migraines with or without aura.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to","secondary_identifiers":["OMIMPS:157300"],"synonyms":[{"name":"migraine with or without aura, susceptibility","type":"exact"},{"name":"migraine with or without aura, susceptibility to","type":"exact"}],"termid":"MONDO:0100246","xrefs":{"Monarch":{"xref_id":"0100246"}}}


id: PBO:0048982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 8","termid":"PBO:0048982"}


id: PBO:0031146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_polysaccharide_level","termid":"PBO:0031146"}


id: GO:0061633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, in which the glucose is converted to glucose-6-phosphate intermediate coupled to transmembrane transport.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through glucose-6-phosphate","termid":"GO:0061620"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"transport-coupled glycolytic process through glucose-6-phosphate","secondary_identifiers":["MetaCyc:GLYCOLYSIS"],"termid":"GO:0061633"}


id: GO:1904272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tryptophan from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:kmv","GOC:TermGenie","PMID:21097500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transport","termid":"GO:1904556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-tryptophan import across plasma membrane","termid":"GO:1904272"}


id: MONDO:0011483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic bone disease","secondary_identifiers":["UMLS:C1858143","MEDGEN:346749","MESH:C536324","OMIM:604771"],"synonyms":[{"name":"Pcbd","type":"related"},{"name":"polycystic bone disease","type":"exact"}],"termid":"MONDO:0011483","xrefs":{"Monarch":{"xref_id":"0011483"}}}


id: MONDO:0017216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Calciphylaxis cutis is a life-threatening syndrome characterized by progressive and painful skin ulcerations associated with media calcification of medium-size and small cutaneous arterial vessels. It affects mainly patients on dialysis or after renal transplantation.","definition_xrefs":["Orphanet:280065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calciphylaxis","termid":"MONDO:0017215"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"calciphylaxis cutis","secondary_identifiers":["UMLS:C4274083","GARD:21070","SCTID:717043006","MEDGEN:900547"],"termid":"MONDO:0017216","xrefs":{"Monarch":{"xref_id":"0017216"}}}


id: PBO:0064788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1H","termid":"PBO:0064788"}


id: PBO:0002710
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.71","termid":"PBO:0002710"}


id: MONDO:0011937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peeling skin syndrome in which the cause of the disease is a mutation in the CSTA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exfoliative ichthyosis","termid":"MONDO:0017339"},{"relation_name":"is_a","term_name":"peeling skin syndrome","termid":"MONDO:0019347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"peeling skin syndrome 4","secondary_identifiers":["DOID:0070523","UMLS:C4225407","MESH:C564309","OMIM:607936","GARD:18426","MEDGEN:895692"],"synonyms":[{"name":"CSTA peeling skin syndrome","type":"exact"},{"name":"PSS4","type":"related"},{"name":"ichthyosis bullosa of Siemens-like","type":"related"},{"name":"ichthyosis, exfoliative, autosomal recessive","type":"related"},{"name":"peeling skin syndrome 4","type":"exact"},{"name":"peeling skin syndrome caused by mutation in CSTA","type":"exact"},{"name":"peeling skin syndrome type 4","type":"exact"}],"termid":"MONDO:0011937","xrefs":{"Monarch":{"xref_id":"0011937"}}}


id: PBO:0004935
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.48","termid":"PBO:0004935"}


id: MOD:01583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01583"}


id: GO:1990151
data:
  {"annotated_genes":["SJAG_01196","SJAG_03915","SJAG_00851","SJAG_02392","SJAG_03011","SJAG_01373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97635,92732],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903067"},{"annotations":[93067,115885,118020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[105543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at the cell tip.","definition_xrefs":["PMID:22768263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein localization","termid":"GO:0008104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_01196":null,"SJAG_01373":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_03915":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell tip","type":"exact"}],"termid":"GO:1990151","terms_by_termid":{"GO:0099117":null,"GO:1903067":null,"GO:1990896":null}}


id: MOD:01397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-threonine residue to form L-serine 5-methyloxazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0474","PubMed:7592021","PubMed:8557573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine 5-methyloxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxyethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazole-4-carboxylic acid (Ser-Thr)","type":"exact"},{"name":"L-serine 5-methyloxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01397"}


id: GO:0009799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism such that a similar arrangement in form and relationship of parts around a common axis, or around each side of a plane is created.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of symmetry","synonyms":[{"name":"determination of symmetry","type":"exact"}],"termid":"GO:0009799"}


id: GO:0051005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipase activity","termid":"GO:0060192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein lipase activity","synonyms":[{"name":"down regulation of lipoprotein lipase activity","type":"exact"},{"name":"down-regulation of lipoprotein lipase activity","type":"exact"},{"name":"downregulation of lipoprotein lipase activity","type":"exact"},{"name":"inhibition of lipoprotein lipase activity","type":"narrow"}],"termid":"GO:0051005"}


id: GO:0018014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of the N-terminal methionine of proteins to form the derivative N-methyl-L-methionine.","definition_xrefs":["RESID:AA0064"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-methionine methylation (obsolete GO:0018014)","termid":"GO:0018014"}


id: GO:0009354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of succinyl-CoA to dihydrolipoamide to form S-succinyldihydrolipoamide. The enzyme is a component of the multienzyme 2-oxoglutarate dehydrogenase complex.","definition_xrefs":["EC:2.3.1.61"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoamide S-succinyltransferase complex (obsolete GO:0009354)","synonyms":[{"name":"dihydrolipoamide S-succinyltransferase complex","type":"exact"}],"termid":"GO:0009354"}


id: PBO:0052548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C1","termid":"PBO:0052548"}


id: GO:0030899
data:
  {"annotated_genes":["SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119732],"is_not":false,"summary":null,"term":"GO:0030899"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of calcium ion (Ca2+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"calcium-dependent ATPase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030899","terms_by_termid":{"GO:0030899":null}}


id: PBO:0113110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3j component of translation initiation factor 3 (eIF3); role in initiation as a substoichiometric component of eIF3; 60S ribosomal subunit recycling accessory factor; involved in nonsense-mediated mRNA decay (NMD); required for 20S pre-rRNA processing; post-transcriptional role in retrotransposition; absence decreases Ty1 Gag protein levels; binds eIF3 subunits Rpg1p, Prt1p and 18S rRNA; eIF3 promotes programmed stop codon readthrough; human homolog EIF3J can complement a yeast null mutant","termid":"PBO:0113110"}


id: PBO:0054806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2219","termid":"PBO:0054806"}


id: PBO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase","termid":"PBO:0004833"}


id: PBO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase, translation initiation factor eIF-3 gamma subunit Gcd10 (predicted)","termid":"PBO:0003112"}


id: PBO:0073465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 1","termid":"PBO:0073465"}


id: GO:0120091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydroxylation of jasmonic acid to 12OH-jasmonic acid.","definition_xrefs":["PMID:28559313","PMID:28760569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"jasmonic acid hydrolase","synonyms":[{"name":"2-oxoglutarate dioxygenase","type":"broad"}],"termid":"GO:0120091"}


id: GO:1902865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryonic camera-type eye development.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:16872597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of embryonic camera-type eye development","termid":"GO:1902863"},{"relation_name":"positively_regulates","term_name":"embryonic camera-type eye development","termid":"GO:0031076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryonic camera-type eye development","synonyms":[{"name":"activation of embryonic camera-type eye development","type":"narrow"},{"name":"activation of embryonic eye development","type":"narrow"},{"name":"positive regulation of embryonic eye development","type":"exact"},{"name":"up regulation of embryonic camera-type eye development","type":"exact"},{"name":"up regulation of embryonic eye development","type":"exact"},{"name":"up-regulation of embryonic camera-type eye development","type":"exact"},{"name":"up-regulation of embryonic eye development","type":"exact"},{"name":"upregulation of embryonic camera-type eye development","type":"exact"},{"name":"upregulation of embryonic eye development","type":"exact"}],"termid":"GO:1902865"}


id: PBO:0018254
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two MCB clusters regulate cell-cycle dependent cdc22+ transcription","termid":"PBO:0018254"}


id: PBO:0078934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 2-1","termid":"PBO:0078934"}


id: PBO:0084312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isopentenyl diphosphate:dimethylallyl diphosphate isomerase; catalyzes an essential activation step in the isoprenoid biosynthetic pathway; required for viability; isopentenyl diphosphate:dimethylallyl diphosphate isomerase is also known as IPP isomerase","termid":"PBO:0084312"}


id: PBO:0044108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated 62","termid":"PBO:0044108"}


id: GO:0103030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + methylglyoxal + NADH = hydroxyacetone + NAD.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ethylglyoxal reductase (NADH-dependent, hydroxyacetone-forming) activity (obsolete GO:0103030)","termid":"GO:0103030"}


id: PBO:0031242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mRNA_splicing,_via_spliceosome","termid":"PBO:0031242"}


id: GO:0046274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignin catabolic process","synonyms":[{"name":"lignin breakdown","type":"exact"},{"name":"lignin catabolism","type":"exact"},{"name":"lignin degradation","type":"exact"}],"termid":"GO:0046274"}


id: GO:0048449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to floral organs. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid","GOC:PO_curators","PO:0025395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"floral organ morphogenesis","termid":"GO:0048444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ formation","secondary_identifiers":["GO:0048436"],"termid":"GO:0048449"}


id: PBO:0066620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIB43A domain with coiled-coils 2","termid":"PBO:0066620"}


id: GO:0002942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a guanine residue in a transfer RNA is methylated twice at the N2 position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA m2,2-guanine biosynthesis","termid":"GO:0002942"}


id: PBO:0002739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ZNF277 ortholog","termid":"PBO:0002739"}


id: MONDO:0016356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse cutaneous systemic sclerosis (dcSSc) is a subtype of Systemic Sclerosis (SSc) characterized by truncal and acral skin fibrosis with an early and significant incidence of diffuse involvement (interstitial lung disease, oliguric renal failure, diffuse gastrointestinal disease, and myocardial involvement).","definition_xrefs":["Orphanet:220393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"diffuse cutaneous systemic sclerosis","secondary_identifiers":["GARD:9751","NCIT:C116791","NANDO:1201010"],"synonyms":[{"name":"DcSSc","type":"related"},{"name":"dSSc","type":"exact"},{"name":"diffuse cutaneous systemic scleroderma","type":"exact"},{"name":"progressive cutaneous systemic scleroderma","type":"exact"},{"name":"progressive cutaneous systemic sclerosis","type":"exact"}],"termid":"MONDO:0016356","xrefs":{"Monarch":{"xref_id":"0016356"}}}


id: MONDO:0016695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-differentiated (WHO grade II), diffusely infiltrating neuroglial tumor, typically located in the cerebral hemispheres. It is composed predominantly of cells which morphologically resemble oligodendroglia. The neoplastic cells have rounded homogeneous nuclei and, on paraffin sections, a swollen, clear cytoplasm ('honeycomb' appearance). (Adapted from WHO)","definition_xrefs":["NCIT:C3288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglial tumor","termid":"MONDO:0018744"},{"relation_name":"is_a","term_name":"grade II glioma","termid":"MONDO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"oligodendroglioma","secondary_identifiers":["GARD:9953","MedDRA:10030286","NANDO:2200089","MESH:D009837","Orphanet:251627","MEDGEN:45190","ICDO:9450/3","ONCOTREE:ODG","EFO:0000632","UMLS:C0028945","DOID:3181"],"synonyms":[{"name":"WHO grade II oligodendroglial neoplasm","type":"exact"},{"name":"WHO grade II oligodendroglial tumor","type":"exact"},{"name":"WHO grade II oligodendroglial tumour","type":"exact"},{"name":"oligodendroglial neoplasm","type":"broad"},{"name":"oligodendroglial tumor","type":"broad"},{"name":"oligodendroglial tumour","type":"broad"},{"name":"oligodendroglioma","type":"exact"},{"name":"well differentiated oligodendroglial tumor","type":"exact"},{"name":"well differentiated oligodendroglial tumour","type":"exact"},{"name":"well differentiated oligodendroglioma","type":"exact"}],"termid":"MONDO:0016695","xrefs":{"Monarch":{"xref_id":"0016695"}}}


id: PBO:0035979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035979"}


id: MONDO:0011582
data:
  {"annotated_genes":["SJAG_03222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86879],"is_not":false,"summary":null,"term":"MONDO:0011582"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the NFU1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03222":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:478062","Orphanet:401869","UMLS:C3276432","DOID:0080133","OMIM:605711","GARD:17661"],"synonyms":[{"name":"MMDS1","type":"related"},{"name":"Mmds","type":"broad"},{"name":"NFU1 deficiency","type":"exact"},{"name":"NFU1 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in NFU1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 1","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 1","type":"exact"}],"termid":"MONDO:0011582","terms_by_termid":{"MONDO:0011582":null},"xrefs":{"Monarch":{"xref_id":"0011582"}}}


id: PBO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutive_catalytic_activity","termid":"PBO:0031537"}


id: MOD:02038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-histidine residue with one methyl group.","definition_xrefs":["Unimod:34#H","OMSSA:77","DeltaMass:215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-histidine","synonyms":[{"name":"MOD_RES Methylhistidine","type":"exact"},{"name":"Me1His","type":"exact"},{"name":"Methyl","type":"related"},{"name":"methylh","type":"exact"}],"termid":"MOD:02038"}


id: GO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dithiothreitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to dithiothreitol","termid":"GO:0072720"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dithiothreitol","synonyms":[{"name":"cellular response to 1,4-dithiothreitol","type":"exact"},{"name":"cellular response to DTT","type":"exact"}],"termid":"GO:0072721"}


id: GO:2001000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xylan catabolic process","synonyms":[{"name":"regulation of xylan breakdown","type":"exact"},{"name":"regulation of xylan catabolism","type":"exact"},{"name":"regulation of xylan degradation","type":"exact"}],"termid":"GO:2001000"}


id: PBO:0076863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 13A","termid":"PBO:0076863"}


id: GO:0010472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-beta-L-galactose + alpha-D-glucose 1-phosphate = beta-L-galactose-1-phosphate + GDP-alpha-D-glucose.","definition_xrefs":["RHEA:65712","PMID:17485667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"GDP-galactose:glucose-1-phosphate guanylyltransferase activity","secondary_identifiers":["MetaCyc:RXN4FS-13"],"synonyms":[{"name":"GDP-L-galactose phosphorylase activity","type":"broad"},{"name":"GDP-L-galactose:glucose-1-phosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0010472"}


id: PBO:0066355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 2","termid":"PBO:0066355"}


id: GO:0036113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of very long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a very long-chain fatty-acyl group. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty-acyl-CoA metabolic process","termid":"GO:0036111"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"very long-chain fatty-acyl-CoA catabolic process","synonyms":[{"name":"very long-chain fatty-acyl-CoA breakdown","type":"exact"},{"name":"very long-chain fatty-acyl-CoA catabolism","type":"exact"},{"name":"very long-chain fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036113"}


id: GO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of salivary gland boundary specification","synonyms":[{"name":"regulation of salivary gland determination","type":"exact"}],"termid":"GO:0045704"}


id: PBO:0079269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39B","termid":"PBO:0079269"}


id: PBO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue1/4 family involved in ER associated protein catabolism (predicted)","termid":"PBO:0005137"}


id: GO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epothilone, a drug obtained from the myxobacteria Sporangium cellulosum that interferes with cell division. Some epothilones are being studied as treatments for cancer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"epothilone metabolic process","termid":"GO:0050813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"epothilone biosynthetic process","synonyms":[{"name":"epothilone anabolism","type":"exact"},{"name":"epothilone biosynthesis","type":"exact"},{"name":"epothilone formation","type":"exact"},{"name":"epothilone synthesis","type":"exact"}],"termid":"GO:0050814"}


id: PBO:0047507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER1L6 antisense RNA 2","termid":"PBO:0047507"}


id: PR:O59746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.11c","synonyms":[{"name":"Spom972h-SPBC530.11c","type":"exact"}],"termid":"PR:O59746"}


id: PBO:0085531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29B has a paralog, RPS29A, that arose from the whole genome duplication","termid":"PBO:0085531"}


id: GO:0048796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a swim bladder to attain its fully functional state. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder maturation","synonyms":[{"name":"gas bladder maturation","type":"exact"}],"termid":"GO:0048796"}


id: GO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell migration","termid":"GO:0043542"}


id: FYPO:0004662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to UV","synonyms":[{"name":"normal cell population viability following cellular response to UV","type":"exact"},{"name":"normal viability following UV exposure","type":"exact"},{"name":"normal viability following cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0004662"}


id: PBO:0012259
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staurosporine supersensitive","termid":"PBO:0012259"}


id: PBO:0074789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 10","termid":"PBO:0074789"}


id: PBO:0078048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 38","termid":"PBO:0078048"}


id: PBO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad32 nuclease","termid":"PBO:0000361"}


id: PR:O60139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin carboxyl-terminal hydrolase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.08c","secondary_identifiers":["UniProtKB:O60139"],"synonyms":[{"name":"SPBC18H10.08c","type":"related"},{"name":"Spom972h-USP2","type":"exact"},{"name":"deubiquitinating enzyme 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60139"}


id: GO:0046409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate or quinate ester of p-coumaric acid + NADPH + H+ + O2 = caffeic acid conjugate (caffeoyl shikimic acid or chlorogenic acid) + H2O + NADP+.","definition_xrefs":["PMID:11429408","PMID:11891223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"p-coumarate 3-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP98A3","type":"narrow"}],"termid":"GO:0046409"}


id: PBO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 8","termid":"PBO:0071350"}


id: GO:0036362
data:
  {"annotated_genes":["SJAG_02626","SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119637,120010],"is_not":false,"summary":null,"term":"GO:0036362"}]},"cv_name":"cellular_component","definition":"A double layer of lipid molecules that surrounds an ascus, a capsule containing the sexual spores in some fungi.","definition_xrefs":["GOC:mcc","PMID:21900489","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02626":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036362","terms_by_termid":{"GO:0036362":null}}


id: GO:1901844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["GOC:TermGenie","GOC:rl","PMID:17130302","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"}


id: MONDO:0012143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"hereditary stomatocytosis","termid":"MONDO:0020102"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005066","MONDO:0000426","MONDO:0005570","MONDO:0037792"],"is_obsolete":false,"name":"hereditary cryohydrocytosis with reduced stomatin","secondary_identifiers":["GARD:17036","Orphanet:168577","UMLS:C1837206","OMIM:608885","icd11.foundation:1459095719","MESH:C563840","MEDGEN:332390"],"synonyms":[{"name":"ChC type 2","type":"exact"},{"name":"GLUT1 deficiency syndrome with pseudohyperkalemia and hemolysis","type":"related"},{"name":"SDCHCN","type":"related"},{"name":"cryohydrocytosis, stomatin-deficient, with intellectual disability, seizures, cataracts, and massive hepatosplenomegaly","type":"related"},{"name":"cryohydrocytosis, stomatin-deficient, with mental retardation, seizures, cataracts, and massive hepatosplenomegaly","type":"related"},{"name":"hereditary cryohydrocytosis type 2","type":"exact"},{"name":"sdCHC","type":"exact"},{"name":"stomatin-deficient cryohydrocytosis","type":"exact"},{"name":"stomatin-deficient cryohydrocytosis with neurologic defects","type":"related"}],"termid":"MONDO:0012143","xrefs":{"Monarch":{"xref_id":"0012143"}}}


id: PBO:0018276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4 (predicted)","termid":"PBO:0018276"}


id: GO:1900381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asperthecin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of asperthecin biosynthetic process","termid":"GO:1900379"},{"relation_name":"positively_regulates","term_name":"asperthecin biosynthetic process","termid":"GO:0036184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"positive regulation of asperthecin biosynthetic process","synonyms":[{"name":"activation of asperthecin biosynthesis","type":"exact"},{"name":"activation of asperthecin biosynthetic process","type":"narrow"},{"name":"activation of asperthecin formation","type":"exact"},{"name":"activation of asperthecin synthesis","type":"exact"},{"name":"positive regulation of asperthecin biosynthesis","type":"exact"},{"name":"positive regulation of asperthecin formation","type":"exact"},{"name":"positive regulation of asperthecin synthesis","type":"exact"},{"name":"up regulation of asperthecin biosynthesis","type":"exact"},{"name":"up regulation of asperthecin biosynthetic process","type":"exact"},{"name":"up regulation of asperthecin formation","type":"exact"},{"name":"up regulation of asperthecin synthesis","type":"exact"},{"name":"up-regulation of asperthecin biosynthesis","type":"exact"},{"name":"up-regulation of asperthecin biosynthetic process","type":"exact"},{"name":"up-regulation of asperthecin formation","type":"exact"},{"name":"up-regulation of asperthecin synthesis","type":"exact"},{"name":"upregulation of asperthecin biosynthesis","type":"exact"},{"name":"upregulation of asperthecin biosynthetic process","type":"exact"},{"name":"upregulation of asperthecin formation","type":"exact"},{"name":"upregulation of asperthecin synthesis","type":"exact"}],"termid":"GO:1900381"}


id: GO:1902673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left posteriolateral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GOC:giardia","PMID:5961344","GO_REF:0000064","GOC:TermGenie","ISBN:9780124260207","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left posteriolateral flagellum","termid":"GO:0097556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"left posteriolateral basal body","synonyms":[{"name":"cilial basal body of left posteriolateral cilium","type":"exact"},{"name":"cilial basal body of left posteriolateral flagellum","type":"exact"},{"name":"cilial basal body of left posterolateral cilium","type":"exact"},{"name":"cilial basal body of left posterolateral flagellum","type":"exact"},{"name":"ciliary basal body of left posteriolateral cilium","type":"exact"},{"name":"ciliary basal body of left posteriolateral flagellum","type":"exact"},{"name":"ciliary basal body of left posterolateral cilium","type":"exact"},{"name":"ciliary basal body of left posterolateral flagellum","type":"exact"},{"name":"cilium basal body of left posteriolateral cilium","type":"exact"},{"name":"cilium basal body of left posteriolateral flagellum","type":"exact"},{"name":"cilium basal body of left posterolateral cilium","type":"exact"},{"name":"cilium basal body of left posterolateral flagellum","type":"exact"},{"name":"left posteriolateral flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left posteriolateral cilium","type":"exact"},{"name":"microtubule basal body of left posteriolateral flagellum","type":"exact"},{"name":"microtubule basal body of left posterolateral cilium","type":"exact"},{"name":"microtubule basal body of left posterolateral flagellum","type":"exact"}],"termid":"GO:1902673"}


id: PBO:0063529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 11","termid":"PBO:0063529"}


id: PBO:0089341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATPase Fft2","termid":"PBO:0089341"}


id: MOD:01153
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an methylsulfanyl group (thiomethyl group).","definition_xrefs":["Unimod:39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolated residue","termid":"MOD:01886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthiolated residue","synonyms":[{"name":"Beta-methylthiolation","type":"related"},{"name":"Methylthio","type":"related"}],"termid":"MOD:01153"}


id: MONDO:0033652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 17","secondary_identifiers":["MEDGEN:1730423","UMLS:C5436718","GARD:16414","DOID:0070502","OMIM:619061"],"synonyms":[{"name":"MC4DN17","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 17","type":"exact"}],"termid":"MONDO:0033652","xrefs":{"Monarch":{"xref_id":"0033652"}}}


id: PBO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","termid":"PBO:0036526"}


id: MONDO:0800317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 4","secondary_identifiers":["UMLS:C1845295","MEDGEN:336904"],"synonyms":[{"name":"POF4","type":"exact"}],"termid":"MONDO:0800317","xrefs":{"Monarch":{"xref_id":"0800317"}}}


id: PBO:0053213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9C","termid":"PBO:0053213"}


id: GO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-citramalate + succinyl-CoA = citramalyl-CoA + succinate.","definition_xrefs":["RHEA:38287","PMID:16547052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"succinate-citramalate CoA-transferase activity","secondary_identifiers":["MetaCyc:2.8.3.7-RXN"],"synonyms":[{"name":"citramalate coenzyme A-transferase activity","type":"exact"},{"name":"itaconate CoA-transferase activity","type":"exact"},{"name":"succinyl coenzyme A-citramalyl coenzyme A transferase activity","type":"exact"},{"name":"succinyl-CoA:citramalate CoA-transferase activity","type":"exact"}],"termid":"GO:0047370"}


id: GO:0071120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to the cell surface antigen CD47.","definition_xrefs":["PMID:15292185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD47 complex","synonyms":[{"name":"ITGA4-ITGB1-CB47 complex","type":"narrow"}],"termid":"GO:0071120"}


id: SO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_C_cluster","synonyms":[{"name":"V DJ C cluster","type":"exact"},{"name":"V-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000542"}


id: PBO:0034467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromere_during_vegetative_growth","termid":"PBO:0034467"}


id: GO:1902396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a bicellular tight junction.","definition_xrefs":["GOC:TermGenie","PMID:18332111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to bicellular tight junction","synonyms":[{"name":"protein localisation in tight junction","type":"exact"},{"name":"protein localisation to tight junction","type":"exact"},{"name":"protein localization in tight junction","type":"exact"}],"termid":"GO:1902396"}


id: GO:0018174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of protein to heme P460.","definition_xrefs":["RESID:AA0271","RESID:AA0266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein-heme P460 linkage","synonyms":[{"name":"protein-haem P460 linkage","type":"exact"}],"termid":"GO:0018174"}


id: PBO:0055621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3060","termid":"PBO:0055621"}


id: GO:0071236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to antibiotic","termid":"GO:0071236"}


id: PBO:0029815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape_(obsolete_FYPO:0002422)","termid":"PBO:0029815"}


id: GO:0051457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in nucleus","synonyms":[{"name":"maintenance of nuclear protein localization","type":"exact"},{"name":"maintenance of protein localization in nucleus","type":"related"},{"name":"maintenance of protein location in cell nucleus","type":"exact"},{"name":"nuclear protein retention","type":"narrow"},{"name":"nuclear protein sequestering","type":"narrow"},{"name":"nuclear protein sequestration","type":"narrow"},{"name":"protein retention in nucleus","type":"narrow"},{"name":"protein sequestration in nucleus","type":"narrow"},{"name":"protein storage in nucleus","type":"narrow"},{"name":"protein-nuclear retention","type":"narrow"},{"name":"sequestration of protein in nucleus","type":"narrow"},{"name":"storage of protein in nucleus","type":"narrow"}],"termid":"GO:0051457"}


id: PBO:0077404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 139","termid":"PBO:0077404"}


id: PBO:0082843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle protein; involved in vesicle formation and incorporation of specific secretory cargo; required for the delivery of bud-site selection protein Axl2p and Nha1p antiporter to cell surface; related to Drosophila cornichon; ERV14 has a paralog, ERV15, that arose from the whole genome duplication","termid":"PBO:0082843"}


id: PBO:0041050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 1","termid":"PBO:0041050"}


id: GO:0046096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyuridine, 2-deoxyribosyluracil, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyuridine metabolic process","synonyms":[{"name":"deoxyuridine metabolism","type":"exact"}],"termid":"GO:0046096"}


id: GO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex formed by the association of NHE3, E3KARP and alpha-actinin upon an increase in calcium ion concentration; found in clusters localized on plasma membrane and in intracellular compartments.","definition_xrefs":["PMID:11948184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NHE3/E3KARP/ACTN4 complex","synonyms":[{"name":"NHE3/E3KARP/alpha-actinin complex","type":"exact"}],"termid":"GO:0032766"}


id: PBO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Elf1","termid":"PBO:0001325"}


id: PBO:0087538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA is comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins, which influences multiple processes such as the cell cycle, heat-shock resistance, mating, sporulation, and telomeric silencing","termid":"PBO:0087538"}


id: GO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm in response to deprivation of glucose.","definition_xrefs":["GOC:al","PMID:3541942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to glucose starvation","termid":"GO:0042149"},{"relation_name":"is_a","term_name":"positive regulation of protein export from nucleus","termid":"GO:0046827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus in response to glucose starvation","termid":"GO:0036279"}


id: GO:0052137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in host (obsolete GO:0052137)","synonyms":[{"name":"aerotaxis within host","type":"exact"}],"termid":"GO:0052137"}


id: PBO:0060464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NALCN channel auxiliary factor 1","termid":"PBO:0060464"}


id: GO:0150058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 3. Amylin receptor complex 3 (AMY3) also serves as a receptor for the amyloid-beta complex. Ligand binding to AMY3 results in increased cytosolic calcium ion levels and in activation on multiple intracellular signaling pathways.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"amylin receptor complex 3","synonyms":[{"name":"AMY3 complex","type":"exact"}],"termid":"GO:0150058"}


id: FYPO:0001077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal polysaccharide level","synonyms":[{"name":"normal polysaccharide accumulation","type":"related"},{"name":"normal polysaccharide level during mitotic cell cycle","type":"related"},{"name":"normal polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001077"}


id: PBO:0053737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 960","termid":"PBO:0053737"}


id: PR:Q9USP7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mto2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C902.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.06","synonyms":[{"name":"Spom972h-mto2","type":"exact"}],"termid":"PR:Q9USP7"}


id: MONDO:0007343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital digital clubbing is a rare genodermatosis disorder characterized by enlargement of the terminal segments of fingers and toes with thickened nails without any other abnormality.","definition_xrefs":["Orphanet:217059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital digital clubbing","secondary_identifiers":["UMLS:C0345408","GARD:17117","MEDGEN:576901","OMIM:119900","icd11.foundation:130631845"],"synonyms":[{"name":"acropachy, hereditary","type":"related"},{"name":"clubbing of digits","type":"related"},{"name":"digital clubbing, isolated congenital","type":"related"},{"name":"isolated congenital acropachy","type":"exact"},{"name":"isolated congenital nail clubbing","type":"exact"}],"termid":"MONDO:0007343","xrefs":{"Monarch":{"xref_id":"0007343"}}}


id: PBO:0043775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A1","termid":"PBO:0043775"}


id: GO:0061561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trigeminal ganglion. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion formation","termid":"GO:0061560"},{"relation_name":"part_of","term_name":"trigeminal ganglion morphogenesis","termid":"GO:0061556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion formation","synonyms":[{"name":"trigeminal ganglia formation","type":"related"}],"termid":"GO:0061561"}


id: PBO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 143","termid":"PBO:0075094"}


id: PBO:0052962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 2","termid":"PBO:0052962"}


id: PBO:0077477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 199","termid":"PBO:0077477"}


id: GO:0140029
data:
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id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: GO:0018051
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-tryptophan amide by hydrolysis and oxidation of an interior Trp-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0098"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-tryptophan amidation (obsolete GO:0018051)","termid":"GO:0018051"}


id: GO:0097667
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Rcy1 in S. cerevisiae (Pof6 in S. pombe).","definition_xrefs":["PMID:15147268","PMID:14747994","GOC:jd","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Rcy1/Pof6 ubiquitin ligase complex","termid":"GO:0097667"}


id: MOD:01253
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - Malondialdehyde (MDA) adduct","definition_xrefs":["Unimod:319#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C3-H2-O adduct (+54 amu) of malondialdehyde with lysine or methylglyoxal with arginine.","termid":"MOD:00630"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malondialdehyde lysine adduct (+54 amu)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:01253"}


id: PBO:0078424
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-5","termid":"PBO:0078424"}


id: MONDO:0002218
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the temporal lobe.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral hemisphere cancer","termid":"MONDO:0002731"},{"relation_name":"is_a","term_name":"neoplasm of temporal lobe","termid":"MONDO:0021372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"temporal lobe cancer","secondary_identifiers":["UMLS:C0153636","DOID:2135","ICD10CM:C71.2","ICD9:191.2","MEDGEN:509347","SCTID:363468009"],"synonyms":[{"name":"cancer of temporal lobe","type":"exact"},{"name":"malignant neoplasm of temporal lobe","type":"exact"},{"name":"malignant temporal lobe neoplasm","type":"exact"},{"name":"temporal lobe cancer","type":"exact"},{"name":"temporal lobe neoplasm","type":"related"},{"name":"tumour of temporal lobe","type":"related"}],"termid":"MONDO:0002218","xrefs":{"Monarch":{"xref_id":"0002218"}}}


id: PBO:0012591
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  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature initiation of mitosis","termid":"PBO:0012591"}


id: PBO:0063240
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 5","termid":"PBO:0063240"}


id: PBO:0061281
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 2","termid":"PBO:0061281"}


id: GO:0000901
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Antagonizes the ribosome-mediated translation of mRNA into a polypeptide but does not bind directly to nucleic acid.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation repressor activity","termid":"GO:0030371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674"],"is_obsolete":false,"name":"translation repressor activity, non-nucleic acid binding","termid":"GO:0000901"}


id: PR:O14135
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set8 gene.","definition_xrefs":["UniProtKB:O14135","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.09","synonyms":[{"name":"Spom972h-set8","type":"exact"}],"termid":"PR:O14135"}


id: MONDO:0005285
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete kidney stone (obsolete MONDO:0005285)","termid":"MONDO:0005285","xrefs":{"Monarch":{"xref_id":"0005285"}}}


id: PBO:0063934
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pim-3 proto-oncogene, serine/threonine kinase","termid":"PBO:0063934"}


id: GO:0021854
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus development","termid":"GO:0021854"}


id: GO:0170033
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id: GO:0034878
data:
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id: PBO:0062321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 3","termid":"PBO:0062321"}


id: PBO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8A","termid":"PBO:0043664"}


id: PBO:0067549
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 698, pseudogene","termid":"PBO:0067549"}


id: MONDO:0002127
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of any part of the urethra. It is characterized by decreased urinary stream and often other obstructive voiding symptoms.","definition_xrefs":["MESH:D014525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral obstruction","termid":"MONDO:0001556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral stricture","secondary_identifiers":["DOID:1829","ICD9:598.9","NCIT:C79821","UMLS:C4551691","icd11.foundation:611219038","HP:0012227","ICD9:598.8","SCTID:76618002","MEDGEN:1641821","ICD10CM:N35"],"synonyms":[{"name":"urethral stricture","type":"exact"},{"name":"urethral stricture (disease)","type":"exact"}],"termid":"MONDO:0002127","xrefs":{"Monarch":{"xref_id":"0002127"}}}


id: PATO:0001507
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's being interrupted of its normal course.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted","termid":"PATO:0001507"}


id: PBO:0069410
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 670, pseudogene","termid":"PBO:0069410"}


id: FYPO:0001527
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal GTP binding","termid":"FYPO:0001527"}


id: GO:0034320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexanoyl-CoA + an alcohol = CoA + a hexyl ester.","definition_xrefs":["PMID:16361250","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-hexanoyltransferase activity (obsolete GO:0034320)","termid":"GO:0034320"}


id: PBO:0003592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps68 (predicted)","termid":"PBO:0003592"}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: PBO:0028985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_increase_during_cellular_response_to_heat_stress","termid":"PBO:0028985"}


id: PBO:0084472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator that regulates transcript levels of the FLP1 gene; acts in concert with Rep2p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification and 2-micron plasmid-inheritance; also autoregulates levels of its own transcript; both Rep1p and Rep2p are sumoylated which is important for function","termid":"PBO:0084472"}


id: PBO:0079757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocortin 3","termid":"PBO:0079757"}


id: PBO:0044264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 2","termid":"PBO:0044264"}


id: GO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA or snRNA + S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleoside) in mRNA or snRNA + S-adenosyl-L-homocysteine + H+. This activity catalyzes the methylation of the ribose on the first transcribed nucleotide of mRNAs and snRNAs.","definition_xrefs":["EC:2.1.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0140098","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"methyltransferase cap1 activity","secondary_identifiers":["Reactome:R-HSA-9684033","Reactome:R-HSA-9694521","Reactome:R-HSA-9684032","Reactome:R-HSA-9694721","Reactome:R-HSA-9694499","Reactome:R-HSA-9684030","MetaCyc:2.1.1.57-RXN","Reactome:R-HSA-9834003"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (nucleoside-2'-O-)-methyltransferase activity","type":"related"},{"name":"mRNA (adenosine-2'-O-)-methyltransferase activity","type":"related"},{"name":"mRNA (nucleoside-2'-O-)-methyltransferase activity","type":"related"},{"name":"messenger RNA (nucleoside-2'-)-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate nucleoside 2'-methyltransferase activity","type":"related"}],"termid":"GO:0004483"}


id: MONDO:0014007
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87000],"is_not":false,"summary":null,"term":"MONDO:0014007"}]},"cv_name":"mondo","definition":"Any Aicardi-Goutieres syndrome in which the cause of the disease is a mutation in the ADAR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"ADAR-related type 1 interferonopathy","termid":"MONDO:0700261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005046"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3539013","NANDO:2200898","GARD:15894","OMIM:615010","MEDGEN:761287"],"synonyms":[{"name":"ADAR Aicardi-Goutieres syndrome","type":"exact"},{"name":"AGS6","type":"related"},{"name":"Adar Aicardi-Goutieres syndrome","type":"exact"},{"name":"Aicardi-Goutieres syndrome 6","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in ADAR","type":"exact"},{"name":"Aicardi-Goutieres syndrome caused by mutation in Adar","type":"exact"},{"name":"Aicardi-Goutieres syndrome type 6","type":"exact"}],"termid":"MONDO:0014007","terms_by_termid":{"MONDO:0014007":null},"xrefs":{"Monarch":{"xref_id":"0014007"}}}


id: GO:0050516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate, and ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol polyphosphate multikinase activity (obsolete GO:0050516)","synonyms":[{"name":"inositol polyphosphate multikinase activity","type":"exact"},{"name":"inositol-polyphosphate multikinase activity","type":"exact"}],"termid":"GO:0050516"}


id: PBO:0000568
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.3.2","termid":"PBO:0000568"}


id: PBO:0052955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KxDL motif containing 1","termid":"PBO:0052955"}


id: MONDO:0008143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteoarthritis in which the cause of the disease is a mutation in the FRZB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 1","secondary_identifiers":["ICD9:715.98","ICD9:715.90","SCTID:396275006","MEDGEN:854604","OMIM:165720","UMLS:C3887876"],"synonyms":[{"name":"FRZB osteoarthritis","type":"exact"},{"name":"OS1","type":"related"},{"name":"Oa","type":"related"},{"name":"osteoarthritis caused by mutation in FRZB","type":"exact"},{"name":"osteoarthritis of hip, female-specific, susceptibility to","type":"related"},{"name":"osteoarthritis susceptibility 1","type":"exact"},{"name":"osteoarthritis susceptibility type 1","type":"exact"},{"name":"osteoarthrosis","type":"related"}],"termid":"MONDO:0008143","xrefs":{"Monarch":{"xref_id":"0008143"}}}


id: PBO:0081379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 219","termid":"PBO:0081379"}


id: PBO:0027672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore_with_abnormal_shape","termid":"PBO:0027672"}


id: GO:0006424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. The glutamyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a glutamic acid-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"glutamyl-tRNA aminoacylation","termid":"GO:0006424"}


id: GO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a glutaryl group (CO-CH2-CH2--CH2-CO) from a glutarylated lysine residue in a peptide or protein.","definition_xrefs":["PMID:24703693","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine deglutarylation (obsolete GO:0061699)","termid":"GO:0061699"}


id: PBO:0079375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 10","termid":"PBO:0079375"}


id: MONDO:0014898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive progressive external ophthalmoplegia in which the cause of the disease is a mutation in the TK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"autosomal recessive progressive external ophthalmoplegia","termid":"MONDO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0006025","MONDO:0005066","MONDO:0004069","MONDO:0005336"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3","secondary_identifiers":["MEDGEN:934701","OMIM:617069","UMLS:C4310734","DOID:0111523","GARD:16183"],"synonyms":[{"name":"PEOB3","type":"exact"},{"name":"TK2 autosomal recessive progressive external ophthalmoplegia","type":"exact"},{"name":"autosomal recessive progressive external ophthalmoplegia caused by mutation in TK2","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3; PEOB3","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 3","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 3","type":"related"}],"termid":"MONDO:0014898","xrefs":{"Monarch":{"xref_id":"0014898"}}}


id: PBO:0012860
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsk1 Interacting Molecule","termid":"PBO:0012860"}


id: PBO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36/L42","termid":"PBO:0002195"}


id: PBO:0058146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4442","termid":"PBO:0058146"}


id: MONDO:0859207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and gross motor and speech delay","secondary_identifiers":["MEDGEN:1794241","UMLS:C5562031","OMIM:619639"],"termid":"MONDO:0859207","xrefs":{"Monarch":{"xref_id":"0859207"}}}


id: PBO:0087023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L11A; expressed at twice the level of Rpl11Bp; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11A has a paralog, RPL11B, that arose from the whole genome duplication","termid":"PBO:0087023"}


id: MONDO:0006251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inclusion body fibromatosis (obsolete MONDO:0006251)","termid":"MONDO:0006251","xrefs":{"Monarch":{"xref_id":"0006251"}}}


id: PBO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 1 domain containing 1","termid":"PBO:0048723"}


id: FYPO:0007083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short meiotic spindle assembles, and may begin elongation, but does not elongate normally or completely, and eventually collapses. Upon collapse the spindle may break or shrink.","definition_xrefs":["PomBase:mah","PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"meiotic spindle collapse","synonyms":[{"name":"broken meiotic spindle","type":"related"},{"name":"meiotic spindle breakage","type":"exact"},{"name":"spindle collapse during meiosis","type":"exact"},{"name":"spindle collapse during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007083"}


id: PBO:0086283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in 5'-end processing of mitochondrial RNAs; located in the mitochondrial membrane","termid":"PBO:0086283"}


id: GO:1904474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-dopa stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25044243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to L-phenylalanine derivative","termid":"GO:1904387"},{"relation_name":"is_a","term_name":"response to L-dopa","termid":"GO:1904473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-dopa","termid":"GO:1904474"}


id: MONDO:0015628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2A von Willebrand disease (type 2A VWD) is a subtype of type 2 VWD characterized by a bleeding disorder associated with a decrease in the affinity of the Willebrand factor (von Willebrand factor; VWF) for platelets and the subendothelium caused by a deficiency of high molecular weight VWF multimers.","definition_xrefs":["Orphanet:166084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"von Willebrand disease 2","termid":"MONDO:0013304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"von Willebrand disease type 2A","secondary_identifiers":["GARD:17021","icd11.foundation:1009291548","SCTID:359714009","UMLS:C1282968","MEDGEN:220920","NCIT:C131686"],"synonyms":[{"name":"von Willebrand disease, type 2A","type":"exact"}],"termid":"MONDO:0015628","xrefs":{"Monarch":{"xref_id":"0015628"}}}


id: GO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766","GO:0006629"],"is_obsolete":false,"name":"vitamin D metabolic process","secondary_identifiers":["Reactome:R-HSA-196791"],"synonyms":[{"name":"calciferol metabolic process","type":"narrow"},{"name":"calciferol metabolism","type":"narrow"},{"name":"cholecalciferol metabolic process","type":"narrow"},{"name":"cholecalciferol metabolism","type":"narrow"},{"name":"ergocalciferol metabolic process","type":"narrow"},{"name":"ergocalciferol metabolism","type":"narrow"},{"name":"vitamin D metabolism","type":"exact"}],"termid":"GO:0042359"}


id: PBO:0045845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 35","termid":"PBO:0045845"}


id: SO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, circular RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"double_stranded_RNA_chromosome","termid":"SO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_double_stranded_RNA_chromosome","synonyms":[{"name":"circular double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000967"}


id: MOD:01621
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two or more amino acid residues by forming an adduct with a compound containing a flavin group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin crosslinked residues","termid":"MOD:01621"}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: MONDO:1010157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperostosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperostosis, non-human animal","secondary_identifiers":["OMIA:000507"],"termid":"MONDO:1010157","xrefs":{"Monarch":{"xref_id":"1010157"}}}


id: FYPO:0002564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature transfer RNA (tRNA) measured in a cell is higher than normal. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature tRNA level during vegetative growth","termid":"FYPO:0002579"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased mature tRNA level during vegetative growth","synonyms":[{"name":"increased mature tRNA accumulation during vegetative growth","type":"related"},{"name":"increased mature tRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature tRNA transcript level during vegetative growth","type":"exact"},{"name":"increased mature transfer RNA level during vegetative growth","type":"exact"},{"name":"increased tRNA level during vegetative growth","type":"broad"}],"termid":"FYPO:0002564"}


id: PR:O59812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zwf2 gene.","definition_xrefs":["UniProtKB:O59812","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase C794.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.01c","synonyms":[{"name":"G6PD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-zwf2","type":"exact"}],"termid":"PR:O59812"}


id: PR:O94696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C83.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.12","synonyms":[{"name":"Spom972h-SPBC83.12","type":"exact"}],"termid":"PR:O94696"}


id: PBO:0006202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_product_or_complex","termid":"PBO:0006202"}


id: PBO:0069365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 625, pseudogene","termid":"PBO:0069365"}


id: GO:0071108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K48-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K48-linked deubiquitination","termid":"GO:0071108"}


id: GO:1902046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Fas signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of Fas signaling pathway","termid":"GO:1902044"},{"relation_name":"positively_regulates","term_name":"Fas signaling pathway","termid":"GO:0036337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Fas signaling pathway","synonyms":[{"name":"activation of Apo-1 signaling pathway","type":"narrow"},{"name":"activation of CD95 signaling pathway","type":"narrow"},{"name":"activation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"activation of Fas receptor signaling pathway","type":"narrow"},{"name":"activation of Fas signaling pathway","type":"narrow"},{"name":"activation of Fas-FasL signaling pathway","type":"narrow"},{"name":"activation of FasL signaling pathway","type":"related"},{"name":"activation of FasR signaling pathway","type":"narrow"},{"name":"positive regulation of Apo-1 signaling pathway","type":"exact"},{"name":"positive regulation of CD95 signaling pathway","type":"exact"},{"name":"positive regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"positive regulation of Fas receptor signaling pathway","type":"exact"},{"name":"positive regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"positive regulation of FasL signaling pathway","type":"related"},{"name":"positive regulation of FasR signaling pathway","type":"exact"},{"name":"up regulation of Apo-1 signaling pathway","type":"exact"},{"name":"up regulation of CD95 signaling pathway","type":"exact"},{"name":"up regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"up regulation of Fas receptor signaling pathway","type":"exact"},{"name":"up regulation of Fas signaling pathway","type":"exact"},{"name":"up regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"up regulation of FasL signaling pathway","type":"related"},{"name":"up regulation of FasR signaling pathway","type":"exact"},{"name":"up-regulation of Apo-1 signaling pathway","type":"exact"},{"name":"up-regulation of CD95 signaling pathway","type":"exact"},{"name":"up-regulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"up-regulation of Fas receptor signaling pathway","type":"exact"},{"name":"up-regulation of Fas signaling pathway","type":"exact"},{"name":"up-regulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"up-regulation of FasL signaling pathway","type":"related"},{"name":"up-regulation of FasR signaling pathway","type":"exact"},{"name":"upregulation of Apo-1 signaling pathway","type":"exact"},{"name":"upregulation of CD95 signaling pathway","type":"exact"},{"name":"upregulation of FAS ligand-Fas signaling pathway","type":"narrow"},{"name":"upregulation of Fas receptor signaling pathway","type":"exact"},{"name":"upregulation of Fas signaling pathway","type":"exact"},{"name":"upregulation of Fas-FasL signaling pathway","type":"narrow"},{"name":"upregulation of FasL signaling pathway","type":"related"},{"name":"upregulation of FasR signaling pathway","type":"exact"}],"termid":"GO:1902046"}


id: PBO:0060437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 6","termid":"PBO:0060437"}


id: PBO:0084139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity cysteine-specific transporter; has similarity to the Dal5p family of transporters; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YCT1 is not an essential gene","termid":"PBO:0084139"}


id: PBO:0045639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 51 (pseudogene)","termid":"PBO:0045639"}


id: GO:0160077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a single lipid droplet is created from the fusion of two or more lipid droplets.","definition_xrefs":["PMID:34508658","PMID:36477540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet fusion","termid":"GO:0160077"}


id: MONDO:0019698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bent bone dysplasia","secondary_identifiers":["Orphanet:93439","SCTID:254095002","GARD:19196","MEDGEN:609415","UMLS:C0432238","ICD9:756.59"],"synonyms":[{"name":"campomelic dysplasia and related disorders","type":"related"}],"termid":"MONDO:0019698","xrefs":{"Monarch":{"xref_id":"0019698"}}}


id: PBO:0027112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_organization","termid":"PBO:0027112"}


id: MOD:00775
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"An artifactual protein modification that converts an L-histidine residue to L-asparagine by oxidative degradation.","definition_xrefs":["PubMed:9252331","OMSSA:54","Unimod:348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine residue","termid":"MOD:00012"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine (His)","synonyms":[{"name":"His->Asn","type":"related"},{"name":"his2asnh","type":"exact"},{"name":"histidine oxidation to aspargine","type":"related"}],"termid":"MOD:00775"}


id: PBO:0065404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 6","termid":"PBO:0065404"}


id: PBO:0051966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersectin 2","termid":"PBO:0051966"}


id: PBO:0052707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 8","termid":"PBO:0052707"}


id: PBO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug106","termid":"PBO:0016977"}


id: PBO:0075769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 1 pseudogene 1","termid":"PBO:0075769"}


id: MONDO:0100481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis caused by primary infection of or reactivation of latent Mycobacterium tuberculosis. Active tuberculosis characterized by clinical manifestation and active symptoms compatible with tuberculosis, and is distinct from latent tuberculosis infection that occurs without signs or symptoms of active disease.","definition_xrefs":["PMID:30020618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active tuberculosis","secondary_identifiers":["UMLS:C0151332","MEDGEN:508753"],"synonyms":[{"name":"active TB","type":"exact"}],"termid":"MONDO:0100481","xrefs":{"Monarch":{"xref_id":"0100481"}}}


id: PBO:0002810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh3","termid":"PBO:0002810"}


id: PBO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RNF family homolog","termid":"PBO:0001019"}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: GO:1901931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-copaene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"alpha-copaene metabolic process","termid":"GO:1901929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-copaene biosynthetic process","synonyms":[{"name":"alpha-copaene anabolism","type":"exact"},{"name":"alpha-copaene biosynthesis","type":"exact"},{"name":"alpha-copaene formation","type":"exact"},{"name":"alpha-copaene synthesis","type":"exact"}],"termid":"GO:1901931"}


id: GO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgW isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgW immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgW immunoglobulin complex","termid":"GO:0071758"}


id: GO:1904182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["PMID:25525879","GOC:dph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyruvate dehydrogenase activity (obsolete GO:1904182)","synonyms":[{"name":"regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"regulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904182"}


id: PBO:0068757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 2, pseudogene","termid":"PBO:0068757"}


id: PBO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A1","termid":"PBO:0071960"}


id: PR:P54280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mismatch repair endonuclease PMS2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein pms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.02c","secondary_identifiers":["UniProtKB:P54280"],"synonyms":[{"name":"Spom972h-PMS2","type":"exact"}],"termid":"PR:P54280"}


id: GO:1904013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to xenon atom.","definition_xrefs":["GO_REF:0000067","PMID:10089464","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete xenon atom binding (obsolete GO:1904013)","termid":"GO:1904013"}


id: PBO:0071164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 3","termid":"PBO:0071164"}


id: PBO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin domain containing 1","termid":"PBO:0044224"}


id: PBO:0067764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 64","termid":"PBO:0067764"}


id: GO:0160123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of nuclear lamina.","definition_xrefs":["PMID:2824113","PMID:31434876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of nuclear lamina","termid":"GO:0160123"}


id: GO:0000740
data:
  {"annotated_genes":["SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The joining of 2 or more lipid bilayer membranes that surround the nucleus.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane fusion","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000740","terms_by_termid":{"GO:0048288":null}}


id: MONDO:1012558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anal gland disease, non-human animal","termid":"MONDO:1011682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal gland disease, dog","secondary_identifiers":["OMIA:002523-9615"],"termid":"MONDO:1012558","xrefs":{"Monarch":{"xref_id":"1012558"}}}


id: MONDO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess of the cornea.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deep keratitis","termid":"MONDO:0004903"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"},{"relation_name":"is_a","term_name":"corneal infection","termid":"MONDO:0023865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal abscess","secondary_identifiers":["UMLS:C0155091","DOID:11543","ICD10CM:H16.31","MEDGEN:56351","ICD9:370.55","NCIT:C26969","SCTID:64366002","icd11.foundation:485862779"],"termid":"MONDO:0001307","xrefs":{"Monarch":{"xref_id":"0001307"}}}


id: PBO:0109085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 1 like, pseudogene","termid":"PBO:0109085"}


id: GO:0036166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations. Phenotypic switching involves changes in cell morphology and altered gene expression patterns. For example, Candida albicans switches from white cells to opaque cells for sexual mating. Phenotypic switching also occurs in multicellular organisms; smooth muscle cells (SMCs) exhibit phenotypic transitions to allow rapid adaption to fluctuating environmental cues.","definition_xrefs":["Wikipedia:Phenotypic_switching","PMID:8456504","GOC:di","GOC:bf","PMID:12443899","PMID:22406749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenotypic switching","synonyms":[{"name":"phenotypic dimorphism","type":"related"}],"termid":"GO:0036166"}


id: MONDO:0014176
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024567"}]},"cv_name":"mondo","definition":"A rare, genetic neurodegenerative disorder characterized by severe, persistent hypotonia (presenting at birth or in early infancy), severe global developmental delay (with poor or absent speech, difficulty or inability to roll, sit or walk), profound intellectual disability, and failure to thrive. Additional manifestations include microcephaly, progressive peripheral spasticity, bilateral strabismus and nystagmus, constipation, and variable dysmorphic facial features (including plagiocephaly, broad forehead, small nose, low-set ears, micrognathia and open mouth with tented upper lip).","definition_xrefs":["Orphanet:371364"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"hypotonia, infantile, with psychomotor retardation and characteristic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:615419","GARD:17609","MEDGEN:1642314","UMLS:C4706556"],"synonyms":[{"name":"IHPRF","type":"exact"},{"name":"IHPRF syndrome","type":"exact"},{"name":"hypotonia, infantile, with psychomotor retardation and characteristic facies","type":"exact"},{"name":"hypotonia-speech impairment-severe cognitive delay syndrome","type":"exact"},{"name":"infantile hypotonia-psychomotor retardation-characteristic facies syndrome","type":"exact"}],"termid":"MONDO:0014176","terms_by_termid":{"MONDO:0024567":null},"xrefs":{"Monarch":{"xref_id":"0014176"}}}


id: MONDO:0000904
data:
  {"annotated_genes":["SJAG_04003","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013541"},{"annotations":[87649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014171"},{"annotations":[88368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014337"},{"annotations":[88379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014341"},{"annotations":[87217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012399"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0090131","OMIMPS:614039"],"synonyms":[{"name":"CDCBM","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations","type":"exact"}],"termid":"MONDO:0000904","terms_by_termid":{"MONDO:0012399":null,"MONDO:0013541":null,"MONDO:0014171":null,"MONDO:0014337":null,"MONDO:0014341":null},"xrefs":{"Monarch":{"xref_id":"0000904"}}}


id: PBO:0059030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 20","termid":"PBO:0059030"}


id: PBO:0109618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC144A N-terminal like (pseudogene)","termid":"PBO:0109618"}


id: PBO:0063242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 7","termid":"PBO:0063242"}


id: PR:000044778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen K63-polyubiquitinated form in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000044772.","definition_xrefs":["PRO:DAN","PomBase:MAH","PMID:16641370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/K63polyUbiq:(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"K63-polyubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA K63-polyubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA polyubiquitinated form (Schizosaccharomyces pombe)","type":"related"},{"name":"PomBase_original_PRO_term_name: proliferating cell nuclear antigen K63-polyubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/K63polyUbiq+","type":"exact"},{"name":"pcn1/K63polyUbiq:(K164)","type":"exact"}],"termid":"PR:000044778"}


id: FYPO:0002057
data:
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id: PR:Q9UTL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPN-loop GTPase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21231:SF3","OMA:SCHPO01930","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.07c","secondary_identifiers":["UniProtKB:Q9UTL7"],"synonyms":[{"name":"ATP-binding domain 1 family member B homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GPN2","type":"exact"}],"termid":"PR:Q9UTL7"}


id: MONDO:0014781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the TXN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0006025","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 29","secondary_identifiers":["Orphanet:478029","DOID:0111501","GARD:17863","UMLS:C5567607","MEDGEN:1799030","OMIM:616811"],"synonyms":[{"name":"COXPD29","type":"exact"},{"name":"TXN2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 29","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 29; COXPD29","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in TXN2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 29","type":"exact"}],"termid":"MONDO:0014781","xrefs":{"Monarch":{"xref_id":"0014781"}}}


id: PBO:0074184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 5","termid":"PBO:0074184"}


id: GO:0019659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, and possibly ethanol, yielding energy in the form of adenosine triphosphate (ATP).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process","termid":"GO:0006007"},{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucose catabolic process to lactate","secondary_identifiers":["Wikipedia:Lactic_acid_fermentation"],"synonyms":[{"name":"glucose fermentation to lactate","type":"exact"},{"name":"lactate fermentation","type":"exact"}],"termid":"GO:0019659"}


id: GO:0034934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-4-carboxylate + 2 H+ + 2 e- + O2 = cis-3,4-phenanthrenedihydrodiol-4-carboxylate.","definition_xrefs":["UM-BBD_reactionID:r0939"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-4-carboxylate dioxygenase activity (obsolete GO:0034934)","termid":"GO:0034934"}


id: PBO:0084621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-R-sulfoxide reductase; involved in the response to oxidative stress; protects iron-sulfur clusters from oxidative inactivation along with MXR1; involved in the regulation of lifespan","termid":"PBO:0084621"}


id: FYPO:0004432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone. Cells stop growing (and may die) at a concentration of 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone that allows wild type cells to grow.","definition_xrefs":["PMID:18204818","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone","synonyms":[{"name":"hypersensitive to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone","type":"exact"},{"name":"sensitive to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone during mitotic cell cycle","type":"related"},{"name":"sensitive to 2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone during vegetative growth","type":"exact"}],"termid":"FYPO:0004432"}


id: PBO:0046634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 15","termid":"PBO:0046634"}


id: PBO:0056808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD4A antisense RNA 1","termid":"PBO:0056808"}


id: GO:1905014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 'de novo' NAD biosynthetic process from L-tryptophan.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of L-tryptophan metabolic process","termid":"GO:0090358"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"},{"relation_name":"is_a","term_name":"positive regulation of NAD metabolic process","termid":"GO:1902690"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:1905012"},{"relation_name":"positively_regulates","term_name":"'de novo' NAD+ biosynthetic process from L-tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of 'de novo' NAD biosynthetic process from L-tryptophan","synonyms":[{"name":"activation of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"activation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"positive regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"broad"},{"name":"positive regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"upregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"upregulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905014"}


